view test-data/genome_results/short_summary @ 19:2a5b8b9936bf draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit a01d758e10182682225b368696791dd39d6cc820
author iuc
date Tue, 14 Nov 2023 13:03:37 +0000
parents bb935709506a
children ea8146ee148f
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# BUSCO version is: 5.5.0 
# The lineage dataset is: arthropoda_odb10 (Creation date: 2020-09-10, number of genomes: 90, number of BUSCOs: 1013)
# Summarized benchmarking in BUSCO notation for file /tmp/tmpbmq1q2c6/files/8/e/b/dataset_8eb218b1-f367-4315-9915-554c009808cb.dat
# BUSCO was run in mode: euk_genome_aug
# Gene predictor used: augustus

	***** Results: *****

	C:0.1%[S:0.1%,D:0.0%],F:0.0%,M:99.9%,n:1013	   
	1	Complete BUSCOs (C)			   
	1	Complete and single-copy BUSCOs (S)	   
	0	Complete and duplicated BUSCOs (D)	   
	0	Fragmented BUSCOs (F)			   
	1012	Missing BUSCOs (M)			   
	1013	Total BUSCO groups searched		   

Assembly Statistics:
	1	Number of scaffolds
	1	Number of contigs
	62370	Total length
	0.000%	Percent gaps
	62 KB	Scaffold N50
	62 KB	Contigs N50


Dependencies and versions:
	hmmsearch: 3.1
	bbtools: 39.01
	makeblastdb: 2.14.0+
	tblastn: 2.14.0+
	augustus: 3.5.0
	gff2gbSmallDNA.pl: None
	new_species.pl: None
	etraining: None
	busco: 5.5.0