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view test-data/genome_results/short_summary_cached @ 19:2a5b8b9936bf draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit a01d758e10182682225b368696791dd39d6cc820
author iuc
date Tue, 14 Nov 2023 13:03:37 +0000
parents 94170eee0ad8
children 2babe6d5c561
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# BUSCO version is: 5.5.0 
# The lineage dataset is: archaea_odb10 (Creation date: 2021-02-23, number of genomes: 404, number of BUSCOs: 194)
# Summarized benchmarking in BUSCO notation for file /tmp/tmpbmq1q2c6/files/3/3/0/dataset_330f49ed-7a6b-4380-870f-22494bb4b257.dat
# BUSCO was run in mode: prok_genome
# Gene predictor used: prodigal

	***** Results: *****

	C:0.0%[S:0.0%,D:0.0%],F:0.0%,M:100.0%,n:194	   
	0	Complete BUSCOs (C)			   
	0	Complete and single-copy BUSCOs (S)	   
	0	Complete and duplicated BUSCOs (D)	   
	0	Fragmented BUSCOs (F)			   
	194	Missing BUSCOs (M)			   
	194	Total BUSCO groups searched		   

Assembly Statistics:
	1	Number of scaffolds
	1	Number of contigs
	62370	Total length
	0.000%	Percent gaps
	62 KB	Scaffold N50
	62 KB	Contigs N50


Dependencies and versions:
	hmmsearch: 3.1
	bbtools: 39.01
	prodigal: 2.6.3
	busco: 5.5.0