Mercurial > repos > iuc > busco
view test-data/genome_results/short_summary @ 21:2babe6d5c561 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 21578f94c8a18c7fd3c2e3aa36897768a4674d2a
author | iuc |
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date | Fri, 30 Aug 2024 15:19:56 +0000 |
parents | ea8146ee148f |
children | e5c372c91e46 |
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# BUSCO version is: 5.7.1 # The lineage dataset is: arthropoda_odb10 (Creation date: 2024-01-08, number of genomes: 90, number of BUSCOs: 1013) # Summarized benchmarking in BUSCO notation for file /tmp/tmpl5l1blpe/files/7/a/3/dataset_7a33f452-1064-4b4a-943f-b0efef6a4a4a.dat # BUSCO was run in mode: euk_genome_aug # Gene predictor used: augustus ***** Results: ***** C:0.1%[S:0.1%,D:0.0%],F:0.0%,M:99.9%,n:1013 1 Complete BUSCOs (C) 1 Complete and single-copy BUSCOs (S) 0 Complete and duplicated BUSCOs (D) 0 Fragmented BUSCOs (F) 1012 Missing BUSCOs (M) 1013 Total BUSCO groups searched Assembly Statistics: 1 Number of scaffolds 1 Number of contigs 62370 Total length 0.000% Percent gaps 62 KB Scaffold N50 62 KB Contigs N50 Dependencies and versions: hmmsearch: 3.1 bbtools: 39.06 makeblastdb: 2.15.0+ tblastn: 2.15.0+ augustus: 3.5.0 gff2gbSmallDNA.pl: None new_species.pl: None etraining: None python: sys.version_info(major=3, minor=9, micro=19, releaselevel='final', serial=0) busco: 5.7.1