# HG changeset patch
# User iuc
# Date 1575485135 18000
# Node ID 1e62c28ba91d4b873b16ebbe43f1d90e29e03376
# Parent  1440ae06552f47c87d21e7030211142957ff6fbc
"planemo upload commit 768639889e24aecd31d85d37d6f0bba00ac2a486"

diff -r 1440ae06552f -r 1e62c28ba91d busco.xml
--- a/busco.xml	Mon May 13 09:17:19 2019 -0400
+++ b/busco.xml	Wed Dec 04 13:45:35 2019 -0500
@@ -1,4 +1,4 @@
-<tool id="busco" name="Busco" version="@TOOL_VERSION@+galaxy1">
+<tool id="busco" name="Busco" profile="18.01" version="@TOOL_VERSION@+galaxy2">
     <description>assess genome assembly and annotation completeness</description>
     <macros>
         <token name="@TOOL_VERSION@">3.0.2</token>
@@ -7,6 +7,7 @@
         <requirement type="package" version="@TOOL_VERSION@">busco</requirement>
         <requirement type="package" version="3.5.1">r-base</requirement>
         <requirement type="package" version="3.3.2">augustus</requirement>
+        <requirement type="package" version="1.29">tar</requirement>
     </requirements>
     <command><![CDATA[
 export BUSCO_CONFIG_FILE='busco_config.ini' &&
@@ -17,7 +18,7 @@
 #if $adv.aug_prediction.augustus_mode == 'history':
     ## Using an augustus model from history, we need to unzip it and let augustus find it
     mkdir -p 'augustus_dir/species/' &&
-    tar -C 'augustus_dir/species/' -xzvf '${adv.aug_prediction.augustus_model}' > /dev/null &&
+    tar -C 'augustus_dir/species/' -xzf '${adv.aug_prediction.augustus_model}' &&
 #end if
 
 run_BUSCO.py