# HG changeset patch
# User iuc
# Date 1759174558 0
# Node ID dd6cab3012e19877fd6b02126f1788fb81afe843
# Parent 66acaec9f3867ca20a107427cf623bbd38fb8334
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/main/tools/checkm2/ commit 1d1f552e49a0faf7eb16acd3ecdd8d05142aeaf9
diff -r 66acaec9f386 -r dd6cab3012e1 checkm2.xml
--- a/checkm2.xml Thu Mar 20 06:47:18 2025 +0000
+++ b/checkm2.xml Mon Sep 29 19:35:58 2025 +0000
@@ -3,7 +3,7 @@
1.0.2
- 1
+ 2
checkm2
@@ -16,7 +16,7 @@
#import re
mkdir input_dir &&
#for $i, $file in enumerate($input):
- #set $cleaned = re.sub('[^\s\w\-\\.]', '_', str($file.element_identifier))
+ #set $cleaned = re.sub('[^\w\-\\.]', '_', str($file.element_identifier))
ln -s '$file' 'input_dir/${cleaned}.dat' &&
#end for
checkm2 predict