diff data_manager/checkm2_datamanager.xml @ 2:df2f47a0e57a draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_checkm2 commit 2ae2ddbe15eb071a70355aa0738d753e8d2cdc2e

--- a/data_manager/checkm2_datamanager.xml	Sun Jan 19 18:48:14 2025 +0000
+++ b/data_manager/checkm2_datamanager.xml	Wed Feb 19 13:53:53 2025 +0000
@@ -3,7 +3,7 @@
     <macros>
         <!-- on update run a local test setting `test` to something else than "true" -->
         <token name="@TOOL_VERSION@">1.0.2</token>
-        <token name="@VERSION_SUFFIX@">0</token>
+        <token name="@VERSION_SUFFIX@">1</token>
         <token name="@PROFILE@">23.1</token>
     </macros>
     <requirements>
@@ -13,7 +13,8 @@
     <command detect_errors="exit_code"><![CDATA[
         mkdir -p '$out_file.extra_files_path' &&
         #if $test != "true"
-            checkm2 database --download --path  '$out_file.extra_files_path'/ &&
+            wget 'https://zenodo.org/records/5571251/files/checkm2_database.tar.gz' &&
+            tar -xf 'checkm2_database.tar.gz' -C '$out_file.extra_files_path' &&
             mv '$out_file.extra_files_path'/CheckM2_database/uniref100.KO.1.dmnd '$out_file.extra_files_path' &&
         #else
             touch '$out_file.extra_files_path'/uniref100.KO.1.dmnd &&