Mercurial > repos > iuc > checkm_plot

annotate tool-data/phylum.loc.sample @ 2:9916308301da draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 3ae2bd72f789518e95ef65b97e0e5ac90165e113
author iuc
date Mon, 02 Sep 2024 13:51:37 +0000
parents 356839cd89d2
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
1 # File generated by format_taxon_list.py script
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
2 # taxon description
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
3 Acidobacteria Acidobacteria (15 genomes, 399 marker genes, 276 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
4 Actinobacteria Actinobacteria (731 genomes, 204 marker genes, 119 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
5 Aquificae Aquificae (18 genomes, 486 marker genes, 369 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
6 Bacteroidetes Bacteroidetes (419 genomes, 286 marker genes, 195 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
7 Chlamydiae Chlamydiae (64 genomes, 455 marker genes, 185 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
8 Chlorobi Chlorobi (12 genomes, 612 marker genes, 333 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
9 Chloroflexi Chloroflexi (20 genomes, 225 marker genes, 149 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
10 Crenarchaeota Crenarchaeota (54 genomes, 217 marker genes, 168 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
11 Cyanobacteria Cyanobacteria (129 genomes, 472 marker genes, 368 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
12 Deferribacteres Deferribacteres (6 genomes, 564 marker genes, 339 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
13 Deinococcus-Thermus Deinococcus-Thermus (40 genomes, 528 marker genes, 359 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
14 Dictyoglomi Dictyoglomi (2 genomes, 1060 marker genes, 103 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
15 Euryarchaeota Euryarchaeota (146 genomes, 188 marker genes, 125 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
16 Firmicutes Firmicutes (1349 genomes, 172 marker genes, 99 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
17 Fusobacteria Fusobacteria (32 genomes, 289 marker genes, 159 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
18 Ignavibacteriae Ignavibacteriae (2 genomes, 1003 marker genes, 383 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
19 Nitrospirae Nitrospirae (4 genomes, 676 marker genes, 379 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
20 Planctomycetes Planctomycetes (11 genomes, 360 marker genes, 256 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
21 Proteobacteria Proteobacteria (2343 genomes, 182 marker genes, 119 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
22 Spirochaetes Spirochaetes (71 genomes, 218 marker genes, 127 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
23 Synergistetes Synergistetes (13 genomes, 452 marker genes, 160 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
24 Tenericutes Tenericutes (119 genomes, 177 marker genes, 105 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
25 Thaumarchaeota Thaumarchaeota (4 genomes, 548 marker genes, 265 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
26 Thermodesulfobacteria Thermodesulfobacteria (5 genomes, 813 marker genes, 440 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
27 Thermotogae Thermotogae (14 genomes, 460 marker genes, 267 marker sets)
356839cd89d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
iuc
parents:
diff changeset
28 Verrucomicrobia Verrucomicrobia (12 genomes, 346 marker genes, 245 marker sets)