Mercurial > repos > iuc > checkm_taxonomy_wf
diff tool-data/phylum.loc.sample @ 0:91230b9141c1 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 2a3b068a98bf0e913dc03e0d5c2182cfd102cf27
| author | iuc |
|---|---|
| date | Fri, 29 Jul 2022 20:32:07 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/phylum.loc.sample Fri Jul 29 20:32:07 2022 +0000 @@ -0,0 +1,28 @@ +# File generated by format_taxon_list.py script +# taxon description +Acidobacteria Acidobacteria (15 genomes, 399 marker genes, 276 marker sets) +Actinobacteria Actinobacteria (731 genomes, 204 marker genes, 119 marker sets) +Aquificae Aquificae (18 genomes, 486 marker genes, 369 marker sets) +Bacteroidetes Bacteroidetes (419 genomes, 286 marker genes, 195 marker sets) +Chlamydiae Chlamydiae (64 genomes, 455 marker genes, 185 marker sets) +Chlorobi Chlorobi (12 genomes, 612 marker genes, 333 marker sets) +Chloroflexi Chloroflexi (20 genomes, 225 marker genes, 149 marker sets) +Crenarchaeota Crenarchaeota (54 genomes, 217 marker genes, 168 marker sets) +Cyanobacteria Cyanobacteria (129 genomes, 472 marker genes, 368 marker sets) +Deferribacteres Deferribacteres (6 genomes, 564 marker genes, 339 marker sets) +Deinococcus-Thermus Deinococcus-Thermus (40 genomes, 528 marker genes, 359 marker sets) +Dictyoglomi Dictyoglomi (2 genomes, 1060 marker genes, 103 marker sets) +Euryarchaeota Euryarchaeota (146 genomes, 188 marker genes, 125 marker sets) +Firmicutes Firmicutes (1349 genomes, 172 marker genes, 99 marker sets) +Fusobacteria Fusobacteria (32 genomes, 289 marker genes, 159 marker sets) +Ignavibacteriae Ignavibacteriae (2 genomes, 1003 marker genes, 383 marker sets) +Nitrospirae Nitrospirae (4 genomes, 676 marker genes, 379 marker sets) +Planctomycetes Planctomycetes (11 genomes, 360 marker genes, 256 marker sets) +Proteobacteria Proteobacteria (2343 genomes, 182 marker genes, 119 marker sets) +Spirochaetes Spirochaetes (71 genomes, 218 marker genes, 127 marker sets) +Synergistetes Synergistetes (13 genomes, 452 marker genes, 160 marker sets) +Tenericutes Tenericutes (119 genomes, 177 marker genes, 105 marker sets) +Thaumarchaeota Thaumarchaeota (4 genomes, 548 marker genes, 265 marker sets) +Thermodesulfobacteria Thermodesulfobacteria (5 genomes, 813 marker genes, 440 marker sets) +Thermotogae Thermotogae (14 genomes, 460 marker genes, 267 marker sets) +Verrucomicrobia Verrucomicrobia (12 genomes, 346 marker genes, 245 marker sets)