Mercurial > repos > iuc > checkm_taxonomy_wf
view tool-data/phylum.loc.sample @ 2:19e4e2d98ebb draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/checkm commit 3ae2bd72f789518e95ef65b97e0e5ac90165e113
| author | iuc |
|---|---|
| date | Mon, 02 Sep 2024 13:51:50 +0000 |
| parents | 91230b9141c1 |
| children |
line wrap: on
line source
# File generated by format_taxon_list.py script # taxon description Acidobacteria Acidobacteria (15 genomes, 399 marker genes, 276 marker sets) Actinobacteria Actinobacteria (731 genomes, 204 marker genes, 119 marker sets) Aquificae Aquificae (18 genomes, 486 marker genes, 369 marker sets) Bacteroidetes Bacteroidetes (419 genomes, 286 marker genes, 195 marker sets) Chlamydiae Chlamydiae (64 genomes, 455 marker genes, 185 marker sets) Chlorobi Chlorobi (12 genomes, 612 marker genes, 333 marker sets) Chloroflexi Chloroflexi (20 genomes, 225 marker genes, 149 marker sets) Crenarchaeota Crenarchaeota (54 genomes, 217 marker genes, 168 marker sets) Cyanobacteria Cyanobacteria (129 genomes, 472 marker genes, 368 marker sets) Deferribacteres Deferribacteres (6 genomes, 564 marker genes, 339 marker sets) Deinococcus-Thermus Deinococcus-Thermus (40 genomes, 528 marker genes, 359 marker sets) Dictyoglomi Dictyoglomi (2 genomes, 1060 marker genes, 103 marker sets) Euryarchaeota Euryarchaeota (146 genomes, 188 marker genes, 125 marker sets) Firmicutes Firmicutes (1349 genomes, 172 marker genes, 99 marker sets) Fusobacteria Fusobacteria (32 genomes, 289 marker genes, 159 marker sets) Ignavibacteriae Ignavibacteriae (2 genomes, 1003 marker genes, 383 marker sets) Nitrospirae Nitrospirae (4 genomes, 676 marker genes, 379 marker sets) Planctomycetes Planctomycetes (11 genomes, 360 marker genes, 256 marker sets) Proteobacteria Proteobacteria (2343 genomes, 182 marker genes, 119 marker sets) Spirochaetes Spirochaetes (71 genomes, 218 marker genes, 127 marker sets) Synergistetes Synergistetes (13 genomes, 452 marker genes, 160 marker sets) Tenericutes Tenericutes (119 genomes, 177 marker genes, 105 marker sets) Thaumarchaeota Thaumarchaeota (4 genomes, 548 marker genes, 265 marker sets) Thermodesulfobacteria Thermodesulfobacteria (5 genomes, 813 marker genes, 440 marker sets) Thermotogae Thermotogae (14 genomes, 460 marker genes, 267 marker sets) Verrucomicrobia Verrucomicrobia (12 genomes, 346 marker genes, 245 marker sets)