view test-data/train_1_pos.tabular @ 0:7c6c282ecf5a draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
author iuc
date Fri, 09 Dec 2022 17:40:27 +0000
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383	chr1	0	23	+	chr2	1	24	-	GUUGCGGCUGGACGAGGCGCAGU	CCCAGCGGGGCUGGGCGCGCGGA	.((((((((.(.(....(((...&....)))..).).))).))))).	-14.5	UUGCGGCUGGACGAGGCGC	GCGGGGCUGGGCGCGCGG	2&5	chr1	1	19	+	chr2	5	19	-	489.80	3308.00	3797.8	1.0	1.0	1.0	CDS	miRNA	ENST00000624358;ENST00000651965	ENST00000584178
164	chr1	23	42	-	chr2	24	47	-	GGCCGCGGCGCGAGCCGGG	CCCAGCGGGGCUGGGCGCGCGGA	..(((((((.(.(((((((&))).....)))).))).))))).	-23.9	CCGCGGCGCGAGCCGGG	CCCAGCGGGGCUGGGCGCGCGG	3&1	chr1	25	40	-	chr2	24	46	-	219.80	3308.00	3527.8	1.0	1.0	1.0	protein_coding	miRNA	ENST00000257765;ENST00000423730;ENST00000433730;ENST00000610435	ENST00000584178
141	chr1	42	90	+	chr2	47	97	+	GGGGAUCGCCGAGGGCCGGUCGGCCGCCCCGGGUGCCGCGCGGUGCCG	CGCGCGUGUGUCCCGGCUGCGGUCGGCCGCGCUCGAGGGGUCCCCGUGGC	(((((((.(((((.((.((((((((((.((((((((((((((......&)))))).))).)))))..)))))))))))).)))).).))))))).....	-74.1	GGGGAUCGCCGAGGGCCGGUCGGCCGCCCCGGGUGCCGCGCG	CGCGCGUGUGUCCCGGCUGCGGUCGGCCGCGCUCGAGGGGUCCCC	1&1	chr1	42	84	+	chr2	47	92	+	84.07	73.88	157.95	1.0	1.0	1.0	miRNA	miRNA	ENST00000615959	ENST00000581792
141	chr1	90	140	+	chr2	97	145	+	CGCGCGUGUGUCCCGGCUGCGGUCGGCCGCGCUCGAGGGGUCCCCGUGGC	GGGGAUCGCCGAGGGCCGGUCGGCCGCCCCGGGUGCCGCGCGGUGCCG	((((((.(((.(((((..((((((((((((.((((.(.(((((((.....&))))))).))))).)).)))))))))).))))))))))))))......	-74.1	CGCGCGUGUGUCCCGGCUGCGGUCGGCCGCGCUCGAGGGGUCCCC	GGGGAUCGCCGAGGGCCGGUCGGCCGCCCCGGGUGCCGCGCG	1&1	chr1	90	135	+	chr2	97	139	+	73.88	84.07	157.95	1.0	1.0	1.0	miRNA	miRNA	ENST00000615959	ENST00000615959
141	chr1	140	188	+	chr2	145	195	+	GGGGAUCGCCGAGGGCCGGUCGGCCGCCCCGGGUGCCGCGCGGUGCCG	CGCGCGUGUGUCCCGGCUGCGGUCGGCCGCGCUCGAGGGGUCCCCGUGGC	(((((((.(((((.((.((((((((((.((((((((((((((......&)))))).))).)))))..)))))))))))).)))).).))))))).....	-74.1	GGGGAUCGCCGAGGGCCGGUCGGCCGCCCCGGGUGCCGCGCG	CGCGCGUGUGUCCCGGCUGCGGUCGGCCGCGCUCGAGGGGUCCCC	1&1	chr1	140	182	+	chr2	145	190	+	84.07	73.88	157.95	1.0	1.0	1.0	miRNA	miRNA	ENST00000581792	ENST00000615959
141	chr1	188	238	+	chr2	195	243	+	CGCGCGUGUGUCCCGGCUGCGGUCGGCCGCGCUCGAGGGGUCCCCGUGGC	GGGGAUCGCCGAGGGCCGGUCGGCCGCCCCGGGUGCCGCGCGGUGCCG	((((((.(((.(((((..((((((((((((.((((.(.(((((((.....&))))))).))))).)).)))))))))).))))))))))))))......	-74.1	CGCGCGUGUGUCCCGGCUGCGGUCGGCCGCGCUCGAGGGGUCCCC	GGGGAUCGCCGAGGGCCGGUCGGCCGCCCCGGGUGCCGCGCG	1&1	chr1	188	233	+	chr2	195	237	+	73.88	84.07	157.95	1.0	1.0	1.0	miRNA	miRNA	ENST00000581792	ENST00000581792
134	chr1	238	263	-	chr2	243	292	+	ACUGGUGAAGAGACAUGAGAGGAUG	GGUGAGGCGGGGGGGCGAGCCCUGAGGGGCUCUCGCUUCUGGCGCCAAG	..(((((.((((...((((((....&.............................)))))).))))..)))))..	-17	UGGUGAAGAGACAUGAGAG	CUCUCGCUUCUGGCGCCA	3&30	chr1	240	257	-	chr2	272	261	+	2216.00	1579.00	3795.0	1.0	1.0	1.0	lncRNA	miRNA	ENST00000667915	ENST00000611066
131	chr1	263	285	+	chr2	292	315	-	GGCGCGCGCCGGGCCCGUGCCG	CCCAGCGGGGCUGGGCGCGCGGA	..((((((((.(((((.(((..&....)))))))).))))))))..	-35.6	CGCGCGCCGGGCCCGUGC	GCGGGGCUGGGCGCGCG	3&5	chr1	265	281	+	chr2	296	309	-	161.60	3308.00	3469.6	1.0	0.84	0.84	CDS	miRNA	ENST00000369800;ENST00000522853	ENST00000584178
92	chr1	285	305	-	chr2	315	338	+	UUCCCUCCUCCUCCUCCCCU	GUAGGGGGCGGGCUCCGGCGCUG	..(((.((((((.(......&).)))))).)))...........	-15.3	CCCUCCUCCUCC	GUAGGGGGCGGG	3&1	chr1	287	297	-	chr2	315	327	+	124.00	5122.00	5246.0	1.0	1.0	1.0	lncRNA	miRNA	ENST00000607278	ENST00000577388
75	chr1	305	323	-	chr2	338	361	-	GCCGCGGCGAGCCGGGCC	CCCAGCGGGGCUGGGCGCGCGGA	.(((((.(..(((.((((&........)))).))))))))).	-22.4	CCGCGGCGAGCCGGGCC	GGCUGGGCGCGCGG	2&9	chr1	306	322	-	chr2	346	352	-	104.40	3308.00	3412.4	1.0	1.0	1.0	protein_coding	miRNA	ENST00000371984	ENST00000584178
72	chr1	323	341	+	chr2	361	384	-	CUGGGGGCCCUUCCCGUG	CCCAGCGGGGCUGGGCGCGCGGA	(((.(.((((.((((((.&....))))))..)))).).))).	-25.7	CUGGGGGCCCUUCCCGU	GCGGGGCUGGGCGCGCGG	1&5	chr1	323	340	+	chr2	365	379	-	99.15	3308.00	3407.15	1.0	0.84	0.84	lncRNA	miRNA	ENST00000609544	ENST00000584178
66	chr1	341	359	+	chr2	384	407	-	CGCGGGCGAGCCGGGCCC	CCCAGCGGGGCUGGGCGCGCGGA	.....(((.(((.(((((&.......))))).))).)))...	-23.6	GCGAGCCGGGCCC	GGGCUGGGCGCGC	6&8	chr1	346	354	+	chr2	391	397	-	99.15	3308.00	3407.15	1.0	0.84	0.84	CDS	miRNA	ENST00000270458	ENST00000584178
64	chr1	359	401	-	chr2	407	430	-	GAUGCCUUCCCCGUCCGUCCGUCCGUCCGUCCAUCCGUCCAC	CCCAGCGGGGCUGGGCGCGCGGA	.................(((((.((((((.((..((((....&....)))))).)))))).)))))	-23.8	UCCGUCCGUCCGUCCAUCCGU	GCGGGGCUGGGCGCGCGGA	18&5	chr1	376	380	-	chr2	411	426	-	19720.00	3308.00	23028.0	1.0	0.84	0.84	protein_coding	miRNA	ENST00000356861;ENST00000425528;ENST00000450764;ENST00000589149	ENST00000584178
51	chr1	401	419	+	chr2	430	491	+	CCCCGGGCCGGGCACCGC	CGCGCGUGCGCCCGAGCGCGGCCCGGUGGUCCCUCCCGGACAGGCGUUCGUGCGACGUGUG	(((((((((((((.((((&...))).).))))......))))))).))................................	-29.9	CCCCGGGCCGGGCACCGC	GCGUGCGCCCGAGCGCGGCCCGGUGG	1&4	chr1	401	419	+	chr2	433	456	+	88.57	68.87	157.44	1.0	1.0	1.0	protein_coding	miRNA	ENST00000343605	ENST00000614492
51	chr1	419	437	+	chr2	491	552	+	CCCCGGGCCGGGCACCGC	CGCGCGUGCGCCCGAGCGCGGCCCGGUGGUCCCUCCCGGACAGGCGUUCGUGCGACGUGUG	(((((((((((((.((((&...))).).))))......))))))).))................................	-29.9	CCCCGGGCCGGGCACCGC	GCGUGCGCCCGAGCGCGGCCCGGUGG	1&4	chr1	419	437	+	chr2	494	517	+	88.57	68.87	157.44	1.0	1.0	1.0	protein_coding	miRNA	ENST00000343605	ENST00000577708
37	chr1	437	590	+	chr2	552	575	-	GACUCUUAGCGGUGGAUCACUCGGCUCGUGCGUCGAUGAAGAACGCAGCUAGCUGCGAGAAUUAAUGUGAAUUGCAGGACACAUUGAUCAUCGACACUUCGAACGCACUUGCGGCCCCGGGUUCCUCCCGGGGCUACGCCUGUCUGAGCGUCG	CCCAGCGGGGCUGGGCGCGCGGA	.......................................................................................................(((.(.(.((((((((..........(((.....................&)))..)))))))).).).)))..	-26.5	CGCACUUGCGGCCCCGGGUUCCUCCCGGG	CCCAGCGGGGCUGGGCGCGCG	104&1	chr1	540	466	+	chr2	552	573	-	10440.00	3308.00	13748.0	1.0	0.84	0.84	rRNA	miRNA	ENST00000612463	ENST00000584178
37	chr1	590	743	+	chr2	575	598	-	GACUCUUAGCGGUGGAUCACUCGGCUCGUGCGUCGAUGAAGAACGCAGCUAGCUGCGAGAAUUAAUGUGAAUUGCAGGACACAUUGAUCAUCGACACUUCGAACGCACUUGCGGCCCCGGGUUCCUCCCGGGGCUACGCCUGUCUGAGCGUCG	CCCAGCGGGGCUGGGCGCGCGGA	.......................................................................................................(((.(.(.((((((((..........(((.....................&)))..)))))))).).).)))..	-26.5	CGCACUUGCGGCCCCGGGUUCCUCCCGGG	CCCAGCGGGGCUGGGCGCGCG	104&1	chr1	693	619	+	chr2	575	596	-	10440.00	3308.00	13748.0	1.0	0.84	0.84	rRNA	miRNA	ENST00000610460	ENST00000584178
37	chr1	743	896	+	chr2	598	621	-	GACUCUUAGCGGUGGAUCACUCGGCUCGUGCGUCGAUGAAGAACGCAGCUAGCUGCGAGAAUUAAUGUGAAUUGCAGGACACAUUGAUCAUCGACACUUCGAACGCACUUGCGGCCCCGGGUUCCUCCCGGGGCUACGCCUGUCUGAGCGUCG	CCCAGCGGGGCUGGGCGCGCGGA	.......................................................................................................(((.(.(.((((((((..........(((.....................&)))..)))))))).).).)))..	-26.5	CGCACUUGCGGCCCCGGGUUCCUCCCGGG	CCCAGCGGGGCUGGGCGCGCG	104&1	chr1	846	772	+	chr2	598	619	-	10440.00	3308.00	13748.0	1.0	0.84	0.84	rRNA	miRNA	ENST00000613359	ENST00000584178
37	chr1	896	1049	+	chr2	621	644	-	GACUCUUAGCGGUGGAUCACUCGGCUCGUGCGUCGAUGAAGAACGCAGCUAGCUGCGAGAAUUAAUGUGAAUUGCAGGACACAUUGAUCAUCGACACUUCGAACGCACUUGCGGCCCCGGGUUCCUCCCGGGGCUACGCCUGUCUGAGCGUCG	CCCAGCGGGGCUGGGCGCGCGGA	.......................................................................................................(((.(.(.((((((((..........(((.....................&)))..)))))))).).).)))..	-26.5	CGCACUUGCGGCCCCGGGUUCCUCCCGGG	CCCAGCGGGGCUGGGCGCGCG	104&1	chr1	999	925	+	chr2	621	642	-	10440.00	3308.00	13748.0	1.0	0.84	0.84	rRNA	miRNA	ENST00000619471	ENST00000584178
37	chr1	1049	1202	+	chr2	644	667	-	NA	NA	NA	NA	NA	NA	NA	chr1	1049	1202	+	chr2	644	667	-	10440.00	3308.00	13748.0	1.0	0.84	0.84	rRNA	miRNA	ENST00000611446	ENST00000584178
37	chr1	1202	1355	+	chr2	667	690	-	NA	NA	NA	NA	NA	NA	NA	chr1	1202	1355	+	chr2	667	690	-	10440.00	3308.00	13748.0	1.0	0.84	0.84	rRNA	miRNA	ENST00000619779	ENST00000584178
37	chr1	1355	1508	+	chr2	690	713	-	NA	NA	NA	NA	NA	NA	NA	chr1	1355	1508	+	chr2	690	713	-	10440.00	3308.00	13748.0	1.0	0.84	0.84	rRNA	miRNA	ENST00000616292	ENST00000584178
37	chr1	1508	1661	+	chr2	713	736	-	NA	NA	NA	NA	NA	NA	NA	chr1	1508	1661	+	chr2	713	736	-	10440.00	3308.00	13748.0	1.0	0.84	0.84	rRNA	miRNA	ENST00000618998	ENST00000584178
36	chr1	1661	1679	+	chr2	736	759	-	GGACGGGCCCUUCCCGUG	CCCAGCGGGGCUGGGCGCGCGGA	.(.((.((((.((((((.&....))))))..)))).)))...	-22.5	GACGGGCCCUUCCCGU	GCGGGGCUGGGCGCGC	2&5	chr1	1662	1677	+	chr2	740	752	-	50.24	3308.00	3358.24	1.0	0.84	0.84	CDS	miRNA	ENST00000305943	ENST00000584178
32	chr1	1679	1697	-	chr2	759	782	-	GCGCUGCGCGAGCCGGGC	CCCAGCGGGGCUGGGCGCGCGGA	...((((((..(((.(((&.........))).))))))))).	-20.7	CUGCGCGAGCCGGGC	GCUGGGCGCGCGG	4&10	chr1	1682	1694	-	chr2	768	772	-	43.63	3308.00	3351.63	1.0	1.0	1.0	CDS	miRNA	ENST00000269503;ENST00000585159	ENST00000584178