Mercurial > repos > iuc > chewbbaca_createschema
diff test-data/schema_seed_annotations.tsv @ 0:4e61ec4fd5f5 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/chewbbaca commit 8722918e903ffa4229e0297555731f1172f736c6
| author | iuc |
|---|---|
| date | Sat, 13 Apr 2024 16:09:20 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/schema_seed_annotations.tsv Sat Apr 13 16:09:20 2024 +0000 @@ -0,0 +1,103 @@ +Locus Genome Contig Start Stop Protein_ID Coding_Strand Uniprot_Name UniProt_URL Proteome_ID Proteome_Product Proteome_Gene_Name Proteome_Species Proteome_BSR +GCA-000007265-protein111 GCA_000007265 AE009948.1 115072 115647 111 1 Probable DNA-directed RNA polymerase subunit delta http://purl.uniprot.org/uniprot/Q3K3S3 +GCA-000007265-protein25 GCA_000007265 AE009948.1 35393 35632 25 1 Acyl carrier protein http://purl.uniprot.org/uniprot/Q8E7X3 +GCA-000007265-protein101 GCA_000007265 AE009948.1 104624 105157 101 1 Protein GrpE http://purl.uniprot.org/uniprot/Q3K3T3 +GCA-000007265-protein31 GCA_000007265 AE009948.1 43963 44715 31 1 N-acetyltransferase domain-containing protein http://purl.uniprot.org/uniprot/Q8E7W7 +GCA-000007265-protein79 GCA_000007265 AE009948.1 85478 85918 79 1 Large ribosomal subunit protein uL15 http://purl.uniprot.org/uniprot/Q3K3V0 +GCA-000007265-protein108 GCA_000007265 AE009948.1 111995 112564 108 1 UPF0340 protein SAK_0153 http://purl.uniprot.org/uniprot/Q3K3S6 +GCA-000007265-protein58 GCA_000007265 AE009948.1 74802 76082 58 1 Probable multidrug resistance protein NorM http://purl.uniprot.org/uniprot/A0A0E1EEL2 +GCA-000007265-protein32 GCA_000007265 AE009948.1 44735 46282 32 1 Bifunctional purine biosynthesis protein PurH http://purl.uniprot.org/uniprot/P67545 +GCA-000007265-protein69 GCA_000007265 AE009948.1 81183 81443 69 1 Small ribosomal subunit protein uS17 http://purl.uniprot.org/uniprot/B5XJ45 +GCA-000007265-protein80 GCA_000007265 AE009948.1 85939 87243 80 1 Protein translocase subunit SecY http://purl.uniprot.org/uniprot/Q8E7S1 +GCA-000007265-protein62 GCA_000007265 AE009948.1 77974 78270 62 1 Large ribosomal subunit protein uL23 http://purl.uniprot.org/uniprot/Q8E7T6 +GCA-000007265-protein8 GCA_000007265 AE009948.1 6248 9745 8 1 Transcription-repair-coupling factor http://purl.uniprot.org/uniprot/Q8E7Y7 +GCA-000007265-protein28 GCA_000007265 AE009948.1 40720 42174 28 1 Amidophosphoribosyltransferase http://purl.uniprot.org/uniprot/A0A8I2JU49 +GCA-000007265-protein113 GCA_000007265 AE009948.1 117633 118559 113 1 AB hydrolase-1 domain-containing protein http://purl.uniprot.org/uniprot/Q8E289 +GCA-000007265-protein107 GCA_000007265 AE009948.1 111534 111998 107 1 ECF transporter S component http://purl.uniprot.org/uniprot/A0A1F0CHU0 +GCA-000007265-protein46 GCA_000007265 AE009948.1 59588 60025 46 1 N5-carboxyaminoimidazole ribonucleotide mutase http://purl.uniprot.org/uniprot/A0A380JAU3 +GCA-000007265-protein35 GCA_000007265 AE009948.1 49072 49770 35 1 Putative N-acetylmannosamine-6-phosphate 2-epimerase http://purl.uniprot.org/uniprot/P65518 +GCA-000007265-protein43 GCA_000007265 AE009948.1 55906 56883 43 1 Alpha/beta fold hydrolase http://purl.uniprot.org/uniprot/A0A0E1EEK2 +GCA-000007265-protein67 GCA_000007265 AE009948.1 80528 80941 67 1 Large ribosomal subunit protein uL16 http://purl.uniprot.org/uniprot/Q3K3W2 +GCA-000007265-protein94 GCA_000007265 AE009948.1 99401 99952 94 1 Prolyl-tRNA synthetase http://purl.uniprot.org/uniprot/Q8E2A6 +GCA-000007265-protein75 GCA_000007265 AE009948.1 83653 84189 75 1 Large ribosomal subunit protein uL6 http://purl.uniprot.org/uniprot/Q8E2B9 +GCA-000007265-protein36 GCA_000007265 AE009948.1 49817 51133 36 1 Uncharacterized protein http://purl.uniprot.org/uniprot/Q8E7W2 +GCA-000007265-protein59 GCA_000007265 AE009948.1 76288 76596 59 1 Small ribosomal subunit protein uS10 http://purl.uniprot.org/uniprot/A2RC13 +GCA-000007265-protein30 GCA_000007265 AE009948.1 43392 43940 30 1 Phosphoribosylglycinamide formyltransferase http://purl.uniprot.org/uniprot/A0A8I2FG92 +GCA-000007265-protein34 GCA_000007265 AE009948.1 47521 48825 34 1 LysM domain-containing protein http://purl.uniprot.org/uniprot/Q8E7W4 +GCA-000007265-protein6 GCA_000007265 AE009948.1 4477 5592 6 1 Ribosome-binding ATPase YchF http://purl.uniprot.org/uniprot/Q8E7Y9 +GCA-000007265-protein87 GCA_000007265 AE009948.1 90239 90625 87 1 Large ribosomal subunit protein bL17 http://purl.uniprot.org/uniprot/Q3K3U3 +GCA-000007265-protein51 GCA_000007265 AE009948.1 65231 66229 51 1 Holliday junction branch migration complex subunit RuvB http://purl.uniprot.org/uniprot/Q8E2D9 +GCA-000007265-protein103 GCA_000007265 AE009948.1 107456 108595 103 1 Chaperone protein DnaJ http://purl.uniprot.org/uniprot/Q8E298 +GCA-000007265-protein12 GCA_000007265 AE009948.1 12091 13365 12 1 tRNA(Ile)-lysidine synthase http://purl.uniprot.org/uniprot/Q8E2H4 +GCA-000007265-protein97 GCA_000007265 AE009948.1 101392 102084 97 1 Phosphoglycerate mutase http://purl.uniprot.org/uniprot/A0A076YUP2 +GCA-000007265-protein86 GCA_000007265 AE009948.1 89286 90224 86 1 DNA-directed RNA polymerase subunit alpha http://purl.uniprot.org/uniprot/Q8CX32 +GCA-000007265-protein104 GCA_000007265 AE009948.1 108709 109956 104 1 PLP-dependent aminotransferase family protein http://purl.uniprot.org/uniprot/A0A0E1EJF9 +GCA-000007265-protein24 GCA_000007265 AE009948.1 34390 35382 24 1 Phosphate acyltransferase http://purl.uniprot.org/uniprot/P65740 +GCA-000007265-protein100 GCA_000007265 AE009948.1 103548 104582 100 1 Heat-inducible transcription repressor HrcA http://purl.uniprot.org/uniprot/Q8E2A0 +GCA-000007265-protein1 GCA_000007265 AE009948.1 54 1463 1 1 Chromosomal replication initiator protein DnaA http://purl.uniprot.org/uniprot/A0A0K0MXQ6 +GCA-000007265-protein27 GCA_000007265 AE009948.1 36583 40308 27 1 Phosphoribosylformylglycinamidine synthase http://purl.uniprot.org/uniprot/A0A8I2JTY4 +GCA-000007265-protein82 GCA_000007265 AE009948.1 88092 88310 82 1 Translation initiation factor IF-1 http://purl.uniprot.org/uniprot/A2RC36 +GCA-000007265-protein61 GCA_000007265 AE009948.1 77351 77974 61 1 Large ribosomal subunit protein uL4 http://purl.uniprot.org/uniprot/Q3K3W8 +GCA-000007265-protein109 GCA_000007265 AE009948.1 112601 113443 109 -1 Mechanosensitive ion channel family protein http://purl.uniprot.org/uniprot/Q8E293 +GCA-000007265-protein74 GCA_000007265 AE009948.1 83145 83543 74 1 Small ribosomal subunit protein uS8 http://purl.uniprot.org/uniprot/Q8E2C0 +GCA-000007265-protein110 GCA_000007265 AE009948.1 113600 114883 110 1 Trigger factor http://purl.uniprot.org/uniprot/Q8E292 +GCA-000007265-protein93 GCA_000007265 AE009948.1 98822 99082 93 -1 +GCA-000007265-protein72 GCA_000007265 AE009948.1 82245 82787 72 1 Large ribosomal subunit protein uL5 http://purl.uniprot.org/uniprot/Q3K3V7 +GCA-000007265-protein84 GCA_000007265 AE009948.1 88470 88835 84 1 Small ribosomal subunit protein uS13 http://purl.uniprot.org/uniprot/P66390 +GCA-000007265-protein19 GCA_000007265 AE009948.1 28902 30245 19 1 PcsB protein http://purl.uniprot.org/uniprot/Q8E7X9 +GCA-000007265-protein65 GCA_000007265 AE009948.1 79514 79858 65 1 Large ribosomal subunit protein uL22 http://purl.uniprot.org/uniprot/Q3K3W4 +GCA-000007265-protein49 GCA_000007265 AE009948.1 62573 63871 49 1 Adenylosuccinate lyase http://purl.uniprot.org/uniprot/A0A0E1EEW4 +GCA-000007265-protein55 GCA_000007265 AE009948.1 69250 71892 55 1 Aldehyde-alcohol dehydrogenase http://purl.uniprot.org/uniprot/Q8E7U2 +GCA-000007265-protein41 GCA_000007265 AE009948.1 54083 55000 41 1 N-acetylneuraminate lyase http://purl.uniprot.org/uniprot/A0A076Z407 +GCA-000007265-protein85 GCA_000007265 AE009948.1 88853 89236 85 1 Small ribosomal subunit protein uS11 http://purl.uniprot.org/uniprot/A2RC39 +GCA-000007265-protein70 GCA_000007265 AE009948.1 81468 81836 70 1 Large ribosomal subunit protein uL14 http://purl.uniprot.org/uniprot/A2RC24 +GCA-000007265-protein22 GCA_000007265 AE009948.1 32610 33371 22 1 DNA repair protein RecO http://purl.uniprot.org/uniprot/Q8E2G8 +GCA-000007265-protein112 GCA_000007265 AE009948.1 115920 117524 112 1 CTP synthase http://purl.uniprot.org/uniprot/Q8E290 +GCA-000007265-protein23 GCA_000007265 AE009948.1 33434 34312 23 1 CAAX protease http://purl.uniprot.org/uniprot/A0A1F0CHG3 +GCA-000007265-protein77 GCA_000007265 AE009948.1 84665 85159 77 1 Small ribosomal subunit protein uS5 http://purl.uniprot.org/uniprot/Q3K3V2 +GCA-000007265-protein54 GCA_000007265 AE009948.1 67202 68980 54 1 Acetyltransferase family protein, putative http://purl.uniprot.org/uniprot/A0A0E1EEX2 +GCA-000007265-protein9 GCA_000007265 AE009948.1 10036 10308 9 1 RNA-binding S4 domain-containing protein http://purl.uniprot.org/uniprot/Q8E7Y6 +GCA-000007265-protein39 GCA_000007265 AE009948.1 52961 53404 39 1 YhcH/YjgK/YiaL family protein http://purl.uniprot.org/uniprot/Q8E7V9 +GCA-000007265-protein50 GCA_000007265 AE009948.1 64023 64934 50 1 Helix-turn-helix domain-containing protein http://purl.uniprot.org/uniprot/A0A0E1EEL0 +GCA-000007265-protein44 GCA_000007265 AE009948.1 56906 57709 44 -1 Sialic acid utilization regulator, RpiR family http://purl.uniprot.org/uniprot/A0A0E1EEW0 +GCA-000007265-protein13 GCA_000007265 AE009948.1 13370 13912 13 1 Hypoxanthine-guanine phosphoribosyltransferase http://purl.uniprot.org/uniprot/Q8E2H3 +GCA-000007265-protein95 GCA_000007265 AE009948.1 100172 100591 95 1 DUF2992 domain-containing protein http://purl.uniprot.org/uniprot/Q8E7R4 +GCA-000007265-protein105 GCA_000007265 AE009948.1 110027 110803 105 1 tRNA pseudouridine synthase A http://purl.uniprot.org/uniprot/Q8CX20 +GCA-000007265-protein2 GCA_000007265 AE009948.1 1618 2754 2 1 Beta sliding clamp http://purl.uniprot.org/uniprot/Q8E7Z3 +GCA-000007265-protein29 GCA_000007265 AE009948.1 42202 43224 29 1 Phosphoribosylformylglycinamidine cyclo-ligase http://purl.uniprot.org/uniprot/Q8E2G1 +GCA-000007265-protein60 GCA_000007265 AE009948.1 76701 77327 60 1 Large ribosomal subunit protein uL3 http://purl.uniprot.org/uniprot/Q3K3W9 +GCA-000007265-protein48 GCA_000007265 AE009948.1 61157 62548 48 1 Beta-carotene 15,15'-monooxygenase http://purl.uniprot.org/uniprot/A0A1F0CGC5 +GCA-000007265-protein114 GCA_000007265 AE009948.1 118754 119200 114 1 dUTP diphosphatase http://purl.uniprot.org/uniprot/A0A0H1FVA3 +GCA-000007265-protein45 GCA_000007265 AE009948.1 57991 59256 45 1 Phosphoribosylamine--glycine ligase http://purl.uniprot.org/uniprot/A0A0E1EEK4 +GCA-000007265-protein21 GCA_000007265 AE009948.1 31334 32620 21 1 +GCA-000007265-protein81 GCA_000007265 AE009948.1 87338 87976 81 1 Adenylate kinase http://purl.uniprot.org/uniprot/P65203 +GCA-000007265-protein33 GCA_000007265 AE009948.1 46475 47374 33 1 Peptidase M23 domain-containing protein http://purl.uniprot.org/uniprot/Q8E7W5 +GCA-000007265-protein38 GCA_000007265 AE009948.1 52118 52948 38 1 ABC transmembrane type-1 domain-containing protein http://purl.uniprot.org/uniprot/Q8E7W0 +GCA-000007265-protein11 GCA_000007265 AE009948.1 10803 12089 11 1 beta-lactamase http://purl.uniprot.org/uniprot/Q8E7Y3 +GCA-000007265-protein40 GCA_000007265 AE009948.1 53424 54086 40 1 Beta-carotene 15,15'-monooxygenase http://purl.uniprot.org/uniprot/A0A1F0CI38 +GCA-000007265-protein56 GCA_000007265 AE009948.1 72071 73087 56 1 Alcohol dehydrogenase http://purl.uniprot.org/uniprot/X5K0V4 +GCA-000007265-protein3 GCA_000007265 AE009948.1 2812 3705 3 1 diacylglycerol kinase family protein http://purl.uniprot.org/uniparc/UPI0002BB2C63 +GCA-000007265-protein7 GCA_000007265 AE009948.1 5676 6251 7 1 Peptidyl-tRNA hydrolase http://purl.uniprot.org/uniprot/Q8E2I1 +GCA-000007265-protein53 GCA_000007265 AE009948.1 66825 67205 53 1 MORN motif family protein http://purl.uniprot.org/uniprot/A0A1F0CHD6 +GCA-000007265-protein16 GCA_000007265 AE009948.1 20579 20866 16 1 RNAase http://purl.uniprot.org/uniprot/U5P1X6 +GCA-000007265-protein63 GCA_000007265 AE009948.1 78288 79121 63 1 Large ribosomal subunit protein uL2 http://purl.uniprot.org/uniprot/Q3K3W6 +GCA-000007265-protein26 GCA_000007265 AE009948.1 35756 36460 26 1 Phosphoribosylaminoimidazole-succinocarboxamide synthase http://purl.uniprot.org/uniprot/Q8E2G4 +GCA-000007265-protein106 GCA_000007265 AE009948.1 110766 111524 106 1 pyridoxal kinase http://purl.uniprot.org/uniprot/Q8E7Q4 +GCA-000007265-protein37 GCA_000007265 AE009948.1 51221 52108 37 1 ABC transmembrane type-1 domain-containing protein http://purl.uniprot.org/uniprot/Q8E7W1 +GCA-000007265-protein5 GCA_000007265 AE009948.1 4114 4317 5 1 Gbs0005 protein http://purl.uniprot.org/uniprot/Q8E7Z0 +GCA-000007265-protein71 GCA_000007265 AE009948.1 81916 82221 71 1 Large ribosomal subunit protein uL24 http://purl.uniprot.org/uniprot/Q3K3V8 +GCA-000007265-protein68 GCA_000007265 AE009948.1 80951 81157 68 1 Large ribosomal subunit protein uL29 http://purl.uniprot.org/uniprot/A2RC22 +GCA-000007265-protein47 GCA_000007265 AE009948.1 60012 61103 47 1 N5-carboxyaminoimidazole ribonucleotide synthase http://purl.uniprot.org/uniprot/A0A0E1EJA7 +GCA-000007265-protein99 GCA_000007265 AE009948.1 102830 103405 99 1 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain-containing protein http://purl.uniprot.org/uniprot/Q8E7R0 +GCA-000007265-protein102 GCA_000007265 AE009948.1 105338 107167 102 1 Chaperone protein DnaK http://purl.uniprot.org/uniprot/P0A3J2 +GCA-000007265-protein96 GCA_000007265 AE009948.1 100791 101270 96 1 Competence-specific sigma factor ComX http://purl.uniprot.org/uniprot/Q8E7R3 +GCA-000007265-protein66 GCA_000007265 AE009948.1 79871 80524 66 1 Small ribosomal subunit protein uS3 http://purl.uniprot.org/uniprot/A2RC20 +GCA-000007265-protein20 GCA_000007265 AE009948.1 30369 31337 20 1 Ribose-phosphate pyrophosphokinase 1 http://purl.uniprot.org/uniprot/Q8E2H0 +GCA-000007265-protein57 GCA_000007265 AE009948.1 73207 74697 57 1 Threonine synthase http://purl.uniprot.org/uniprot/A0A0E1EJC0 +GCA-000007265-protein42 GCA_000007265 AE009948.1 55017 55898 42 1 N-acetylmannosamine kinase http://purl.uniprot.org/uniprot/A0A0E1EJA4 +GCA-000007265-protein14 GCA_000007265 AE009948.1 13935 15911 14 1 ATP-dependent zinc metalloprotease FtsH http://purl.uniprot.org/uniprot/Q8E7Y0 +GCA-000007265-protein76 GCA_000007265 AE009948.1 84290 84646 76 1 Large ribosomal subunit protein uL18 http://purl.uniprot.org/uniprot/Q3K3V3 +GCA-000007265-protein98 GCA_000007265 AE009948.1 102081 102833 98 1 Peptidase M15B domain-containing protein http://purl.uniprot.org/uniprot/Q8E7R1 +GCA-000007265-protein64 GCA_000007265 AE009948.1 79220 79498 64 1 Small ribosomal subunit protein uS19 http://purl.uniprot.org/uniprot/Q1JE54 +GCA-000007265-protein52 GCA_000007265 AE009948.1 66381 66818 52 1 protein-tyrosine-phosphatase http://purl.uniprot.org/uniprot/A0A0E1EJB3 +GCA-000007265-protein10 GCA_000007265 AE009948.1 10295 10666 10 1 Cell division protein DivIC http://purl.uniprot.org/uniprot/Q8E7Y5