annotate test-data/annotation_01.gtf @ 0:465d6578b4d0 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
author iuc
date Fri, 26 Aug 2022 22:43:38 +0000
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465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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1 ##gtf-version 3
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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2 #!gff-spec-version 1.21
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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3 #!processor NCBI annotwriter
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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4 #!genome-build ASM301845v1
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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5 #!genome-build-accession NCBI_Assembly:GCF_003018455.1
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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6 #!annotation-date 05/25/2022 04:54:31
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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7 #!annotation-source NCBI RefSeq
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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8 ##sequence-region NZ_CP027599.1 1 5942969
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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9 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=562
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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10 NZ_CP027601.1 RefSeq gene 1 542 . - . gene_id "nbis-pseudogene-254"; ID "nbis-pseudogene-254"; Name "C7A06_RS33350"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33350"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "1";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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11 NZ_CP027601.1 RefSeq transcript 1 542 . - . gene_id "nbis-pseudogene-254"; transcript_id "gene-C7A06_RS33350"; ID "gene-C7A06_RS33350"; Name "C7A06_RS33350"; Parent "nbis-pseudogene-254"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33350"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "1";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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12 NZ_CP027601.1 Protein Homology exon 1 542 . - . gene_id "nbis-pseudogene-254"; transcript_id "gene-C7A06_RS33350"; ID "nbis-exon-5902"; Note "frameshifted; incomplete; missing C-terminus"; Parent "gene-C7A06_RS33350"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001066419.1"; locus_tag "C7A06_RS33350"; partial "true"; product "IS66 family transposase zinc-finger binding domain-containing protein"; pseudo "true"; start_range "." "1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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13 NZ_CP027601.1 Protein Homology CDS 1 542 . - 0 gene_id "nbis-pseudogene-254"; transcript_id "gene-C7A06_RS33350"; ID "cds-C7A06_RS33350"; Note "frameshifted; incomplete; missing C-terminus"; Parent "gene-C7A06_RS33350"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001066419.1"; locus_tag "C7A06_RS33350"; partial "true"; product "IS66 family transposase zinc-finger binding domain-containing protein"; pseudo "true"; start_range "." "1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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14 NZ_CP027601.1 RefSeq gene 562 909 . - . gene_id "nbis-gene-5648"; ID "nbis-gene-5648"; Name "tnpB"; gbkey "Gene"; gene "tnpB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33355";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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15 NZ_CP027601.1 RefSeq transcript 562 909 . - . gene_id "nbis-gene-5648"; transcript_id "gene-C7A06_RS33355"; ID "gene-C7A06_RS33355"; Name "tnpB"; Parent "nbis-gene-5648"; gbkey "Gene"; gene "tnpB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33355"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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16 NZ_CP027601.1 Protein Homology exon 562 909 . - . gene_id "nbis-gene-5648"; transcript_id "gene-C7A06_RS33355"; Dbxref "Genbank:WP_000631725.1"; ID "nbis-exon-5903"; Name "WP_000631725.1"; Note "TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase."; Parent "gene-C7A06_RS33355"; gbkey "CDS"; gene "tnpB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_858152.1"; locus_tag "C7A06_RS33355"; product "IS66 family insertion sequence element accessory protein TnpB"; protein_id "WP_000631725.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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17 NZ_CP027601.1 Protein Homology CDS 562 909 . - 0 gene_id "nbis-gene-5648"; transcript_id "gene-C7A06_RS33355"; Dbxref "Genbank:WP_000631725.1"; ID "cds-WP_000631725.1"; Name "WP_000631725.1"; Note "TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase."; Parent "gene-C7A06_RS33355"; gbkey "CDS"; gene "tnpB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_858152.1"; locus_tag "C7A06_RS33355"; product "IS66 family insertion sequence element accessory protein TnpB"; protein_id "WP_000631725.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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18 NZ_CP027601.1 RefSeq gene 906 1580 . - . gene_id "nbis-gene-5649"; ID "nbis-gene-5649"; Name "tnpA"; gbkey "Gene"; gene "tnpA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33360";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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19 NZ_CP027601.1 RefSeq transcript 906 1580 . - . gene_id "nbis-gene-5649"; transcript_id "gene-C7A06_RS33360"; ID "gene-C7A06_RS33360"; Name "tnpA"; Parent "nbis-gene-5649"; gbkey "Gene"; gene "tnpA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33360"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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20 NZ_CP027601.1 Protein Homology exon 906 1580 . - . gene_id "nbis-gene-5649"; transcript_id "gene-C7A06_RS33360"; Dbxref "Genbank:WP_001341423.1"; ID "nbis-exon-5904"; Name "WP_001341423.1"; Ontology_term "GO:0006313" "GO:0003677" "GO:0004803"; Parent "gene-C7A06_RS33360"; gbkey "CDS"; gene "tnpA"; go_function "DNA binding|0003677||IEA" "transposase activity|0004803||IEA"; go_process "transposition, DNA-mediated|0006313||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_311873.1"; locus_tag "C7A06_RS33360"; product "IS66-like element accessory protein TnpA"; protein_id "WP_001341423.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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21 NZ_CP027601.1 Protein Homology CDS 906 1580 . - 0 gene_id "nbis-gene-5649"; transcript_id "gene-C7A06_RS33360"; Dbxref "Genbank:WP_001341423.1"; ID "cds-WP_001341423.1"; Name "WP_001341423.1"; Ontology_term "GO:0006313" "GO:0003677" "GO:0004803"; Parent "gene-C7A06_RS33360"; gbkey "CDS"; gene "tnpA"; go_function "DNA binding|0003677||IEA" "transposase activity|0004803||IEA"; go_process "transposition, DNA-mediated|0006313||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_311873.1"; locus_tag "C7A06_RS33360"; product "IS66-like element accessory protein TnpA"; protein_id "WP_001341423.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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22 NZ_CP027601.1 RefSeq gene 1664 1930 . + . gene_id "nbis-pseudogene-366"; ID "nbis-pseudogene-366"; Name "C7A06_RS35230"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS35230"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "1664";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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23 NZ_CP027601.1 RefSeq transcript 1664 1930 . + . gene_id "nbis-pseudogene-366"; transcript_id "gene-C7A06_RS35230"; ID "gene-C7A06_RS35230"; Name "C7A06_RS35230"; Parent "nbis-pseudogene-366"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS35230"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "1664";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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24 NZ_CP027601.1 Protein Homology exon 1664 1930 . + . gene_id "nbis-pseudogene-366"; transcript_id "gene-C7A06_RS35230"; ID "nbis-exon-6226"; Note "incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS35230"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_016245103.1"; locus_tag "C7A06_RS35230"; partial "true"; product "YqiJ family protein"; pseudo "true"; start_range "." "1664"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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25 NZ_CP027601.1 Protein Homology CDS 1664 1930 . + 0 gene_id "nbis-pseudogene-366"; transcript_id "gene-C7A06_RS35230"; ID "cds-C7A06_RS35230"; Note "incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS35230"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_016245103.1"; locus_tag "C7A06_RS35230"; partial "true"; product "YqiJ family protein"; pseudo "true"; start_range "." "1664"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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26 NZ_CP027601.1 RefSeq gene 1978 2190 . - . gene_id "nbis-pseudogene-255"; ID "nbis-pseudogene-255"; Name "C7A06_RS33375"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33375"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "1978";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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27 NZ_CP027601.1 RefSeq transcript 1978 2190 . - . gene_id "nbis-pseudogene-255"; transcript_id "gene-C7A06_RS33375"; ID "gene-C7A06_RS33375"; Name "C7A06_RS33375"; Parent "nbis-pseudogene-255"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33375"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "1978";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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28 NZ_CP027601.1 Protein Homology exon 1978 2190 . - . gene_id "nbis-pseudogene-255"; transcript_id "gene-C7A06_RS33375"; ID "nbis-exon-5905"; Note "incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS33375"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1"; locus_tag "C7A06_RS33375"; partial "true"; product "transposase"; pseudo "true"; start_range "." "1978"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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29 NZ_CP027601.1 Protein Homology CDS 1978 2190 . - 0 gene_id "nbis-pseudogene-255"; transcript_id "gene-C7A06_RS33375"; ID "cds-C7A06_RS33375"; Note "incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS33375"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1"; locus_tag "C7A06_RS33375"; partial "true"; product "transposase"; pseudo "true"; start_range "." "1978"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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30 NZ_CP027601.1 RefSeq gene 2252 2425 . + . gene_id "nbis-pseudogene-256"; ID "nbis-pseudogene-256"; Name "C7A06_RS33380"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33380"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "2252";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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31 NZ_CP027601.1 RefSeq transcript 2252 2425 . + . gene_id "nbis-pseudogene-256"; transcript_id "gene-C7A06_RS33380"; ID "gene-C7A06_RS33380"; Name "C7A06_RS33380"; Parent "nbis-pseudogene-256"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33380"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "2252";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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32 NZ_CP027601.1 Protein Homology exon 2252 2425 . + . gene_id "nbis-pseudogene-256"; transcript_id "gene-C7A06_RS33380"; ID "nbis-exon-5906"; Note "incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS33380"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1"; locus_tag "C7A06_RS33380"; partial "true"; product "IS66 family transposase"; pseudo "true"; start_range "." "2252"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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33 NZ_CP027601.1 Protein Homology CDS 2252 2425 . + 0 gene_id "nbis-pseudogene-256"; transcript_id "gene-C7A06_RS33380"; ID "cds-C7A06_RS33380"; Note "incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS33380"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1"; locus_tag "C7A06_RS33380"; partial "true"; product "IS66 family transposase"; pseudo "true"; start_range "." "2252"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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34 NZ_CP027601.1 RefSeq gene 2868 6770 . + . gene_id "nbis-gene-5650"; ID "nbis-gene-5650"; Name "espP"; gbkey "Gene"; gene "espP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33385";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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35 NZ_CP027601.1 RefSeq transcript 2868 6770 . + . gene_id "nbis-gene-5650"; transcript_id "gene-C7A06_RS33385"; ID "gene-C7A06_RS33385"; Name "espP"; Parent "nbis-gene-5650"; gbkey "Gene"; gene "espP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33385"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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36 NZ_CP027601.1 Protein Homology exon 2868 6770 . + . gene_id "nbis-gene-5650"; transcript_id "gene-C7A06_RS33385"; Dbxref "Genbank:WP_001034100.1"; ID "nbis-exon-5907"; Name "WP_001034100.1"; Parent "gene-C7A06_RS33385"; gbkey "CDS"; gene "espP"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052685.1"; locus_tag "C7A06_RS33385"; product "serine protease autotransporter EspP"; protein_id "WP_001034100.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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37 NZ_CP027601.1 Protein Homology CDS 2868 6770 . + 0 gene_id "nbis-gene-5650"; transcript_id "gene-C7A06_RS33385"; Dbxref "Genbank:WP_001034100.1"; ID "cds-WP_001034100.1"; Name "WP_001034100.1"; Parent "gene-C7A06_RS33385"; gbkey "CDS"; gene "espP"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052685.1"; locus_tag "C7A06_RS33385"; product "serine protease autotransporter EspP"; protein_id "WP_001034100.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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38 NZ_CP027601.1 RefSeq gene 7018 7275 . - . gene_id "nbis-gene-5772"; ID "nbis-gene-5772"; Name "C7A06_RS34375"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS34375";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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39 NZ_CP027601.1 RefSeq transcript 7018 7275 . - . gene_id "nbis-gene-5772"; transcript_id "gene-C7A06_RS34375"; ID "gene-C7A06_RS34375"; Name "C7A06_RS34375"; Parent "nbis-gene-5772"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS34375"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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40 NZ_CP027601.1 GeneMarkS-2+ exon 7018 7275 . - . gene_id "nbis-gene-5772"; transcript_id "gene-C7A06_RS34375"; Dbxref "Genbank:WP_000112000.1"; ID "nbis-exon-6062"; Name "WP_000112000.1"; Parent "gene-C7A06_RS34375"; gbkey "CDS"; inference "COORDINATES: ab initio prediction:GeneMarkS-2+"; locus_tag "C7A06_RS34375"; product "hypothetical protein"; protein_id "WP_000112000.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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41 NZ_CP027601.1 GeneMarkS-2+ CDS 7018 7275 . - 0 gene_id "nbis-gene-5772"; transcript_id "gene-C7A06_RS34375"; Dbxref "Genbank:WP_000112000.1"; ID "cds-WP_000112000.1"; Name "WP_000112000.1"; Parent "gene-C7A06_RS34375"; gbkey "CDS"; inference "COORDINATES: ab initio prediction:GeneMarkS-2+"; locus_tag "C7A06_RS34375"; product "hypothetical protein"; protein_id "WP_000112000.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
42 NZ_CP027601.1 RefSeq gene 7314 7526 . + . gene_id "nbis-pseudogene-257"; ID "nbis-pseudogene-257"; Name "C7A06_RS33395"; end_range "7526" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33395"; original_biotype "pseudogene"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
43 NZ_CP027601.1 RefSeq transcript 7314 7526 . + . gene_id "nbis-pseudogene-257"; transcript_id "gene-C7A06_RS33395"; ID "gene-C7A06_RS33395"; Name "C7A06_RS33395"; Parent "nbis-pseudogene-257"; end_range "7526" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33395"; original_biotype "mrna"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
44 NZ_CP027601.1 Protein Homology exon 7314 7526 . + . gene_id "nbis-pseudogene-257"; transcript_id "gene-C7A06_RS33395"; ID "nbis-exon-5908"; Note "incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS33395"; end_range "7526" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1"; locus_tag "C7A06_RS33395"; partial "true"; product "transposase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
45 NZ_CP027601.1 Protein Homology CDS 7314 7526 . + 0 gene_id "nbis-pseudogene-257"; transcript_id "gene-C7A06_RS33395"; ID "cds-C7A06_RS33395"; Note "incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS33395"; end_range "7526" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1"; locus_tag "C7A06_RS33395"; partial "true"; product "transposase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
46 NZ_CP027601.1 RefSeq gene 7574 7840 . - . gene_id "nbis-pseudogene-367"; ID "nbis-pseudogene-367"; Name "C7A06_RS35235"; end_range "7840" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS35235"; original_biotype "pseudogene"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
47 NZ_CP027601.1 RefSeq transcript 7574 7840 . - . gene_id "nbis-pseudogene-367"; transcript_id "gene-C7A06_RS35235"; ID "gene-C7A06_RS35235"; Name "C7A06_RS35235"; Parent "nbis-pseudogene-367"; end_range "7840" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS35235"; original_biotype "mrna"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
48 NZ_CP027601.1 Protein Homology exon 7574 7840 . - . gene_id "nbis-pseudogene-367"; transcript_id "gene-C7A06_RS35235"; ID "nbis-exon-6227"; Note "incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS35235"; end_range "7840" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_016245103.1"; locus_tag "C7A06_RS35235"; partial "true"; product "YqiJ family protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
49 NZ_CP027601.1 Protein Homology CDS 7574 7840 . - 0 gene_id "nbis-pseudogene-367"; transcript_id "gene-C7A06_RS35235"; ID "cds-C7A06_RS35235"; Note "incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS35235"; end_range "7840" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_016245103.1"; locus_tag "C7A06_RS35235"; partial "true"; product "YqiJ family protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
50 NZ_CP027601.1 RefSeq gene 7986 9199 . + . gene_id "nbis-gene-5651"; ID "nbis-gene-5651"; Name "C7A06_RS33410"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33410";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
51 NZ_CP027601.1 RefSeq transcript 7986 9199 . + . gene_id "nbis-gene-5651"; transcript_id "gene-C7A06_RS33410"; ID "gene-C7A06_RS33410"; Name "C7A06_RS33410"; Parent "nbis-gene-5651"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33410"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
52 NZ_CP027601.1 Protein Homology exon 7986 9199 . + . gene_id "nbis-gene-5651"; transcript_id "gene-C7A06_RS33410"; Dbxref "Genbank:WP_162908518.1"; ID "nbis-exon-5909"; Name "WP_162908518.1"; Note "programmed frameshift"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33410"; exception "ribosomal slippage"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_086558238.1"; locus_tag "C7A06_RS33410"; product "IS3 family transposase"; protein_id "WP_162908518.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
53 NZ_CP027601.1 Protein Homology CDS 7986 9199 . + 0 gene_id "nbis-gene-5651"; transcript_id "gene-C7A06_RS33410"; Dbxref "Genbank:WP_162908518.1"; ID "cds-WP_162908518.1"; Name "WP_162908518.1"; Note "programmed frameshift"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33410"; exception "ribosomal slippage"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_086558238.1"; locus_tag "C7A06_RS33410"; product "IS3 family transposase"; protein_id "WP_162908518.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
54 NZ_CP027601.1 RefSeq gene 9240 9620 . - . gene_id "nbis-pseudogene-258"; ID "nbis-pseudogene-258"; Name "C7A06_RS33415"; end_range "9620" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33415"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "9240";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
55 NZ_CP027601.1 RefSeq transcript 9240 9620 . - . gene_id "nbis-pseudogene-258"; transcript_id "gene-C7A06_RS33415"; ID "gene-C7A06_RS33415"; Name "C7A06_RS33415"; Parent "nbis-pseudogene-258"; end_range "9620" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33415"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "9240";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
56 NZ_CP027601.1 Protein Homology exon 9240 9620 . - . gene_id "nbis-pseudogene-258"; transcript_id "gene-C7A06_RS33415"; ID "nbis-exon-5910"; Note "incomplete; partial in the middle of a contig; missing N-terminus and C-terminus"; Parent "gene-C7A06_RS33415"; end_range "9620" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_076611997.1"; locus_tag "C7A06_RS33415"; partial "true"; product "IS3 family transposase"; pseudo "true"; start_range "." "9240"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
57 NZ_CP027601.1 Protein Homology CDS 9240 9620 . - 0 gene_id "nbis-pseudogene-258"; transcript_id "gene-C7A06_RS33415"; ID "cds-C7A06_RS33415"; Note "incomplete; partial in the middle of a contig; missing N-terminus and C-terminus"; Parent "gene-C7A06_RS33415"; end_range "9620" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_076611997.1"; locus_tag "C7A06_RS33415"; partial "true"; product "IS3 family transposase"; pseudo "true"; start_range "." "9240"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
58 NZ_CP027601.1 RefSeq gene 9651 11222 . - . gene_id "nbis-gene-5652"; ID "nbis-gene-5652"; Name "C7A06_RS33420"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33420";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
59 NZ_CP027601.1 RefSeq transcript 9651 11222 . - . gene_id "nbis-gene-5652"; transcript_id "gene-C7A06_RS33420"; ID "gene-C7A06_RS33420"; Name "C7A06_RS33420"; Parent "nbis-gene-5652"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33420"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
60 NZ_CP027601.1 Protein Homology exon 9651 11222 . - . gene_id "nbis-gene-5652"; transcript_id "gene-C7A06_RS33420"; Dbxref "Genbank:WP_000381395.1"; ID "nbis-exon-5911"; Name "WP_000381395.1"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33420"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1"; locus_tag "C7A06_RS33420"; product "IS66 family transposase"; protein_id "WP_000381395.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
61 NZ_CP027601.1 Protein Homology CDS 9651 11222 . - 0 gene_id "nbis-gene-5652"; transcript_id "gene-C7A06_RS33420"; Dbxref "Genbank:WP_000381395.1"; ID "cds-WP_000381395.1-10"; Name "WP_000381395.1"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33420"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1"; locus_tag "C7A06_RS33420"; product "IS66 family transposase"; protein_id "WP_000381395.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
62 NZ_CP027601.1 RefSeq gene 11242 11589 . - . gene_id "nbis-gene-5653"; ID "nbis-gene-5653"; Name "tnpB"; gbkey "Gene"; gene "tnpB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33425";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
63 NZ_CP027601.1 RefSeq transcript 11242 11589 . - . gene_id "nbis-gene-5653"; transcript_id "gene-C7A06_RS33425"; ID "gene-C7A06_RS33425"; Name "tnpB"; Parent "nbis-gene-5653"; gbkey "Gene"; gene "tnpB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33425"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
64 NZ_CP027601.1 Protein Homology exon 11242 11589 . - . gene_id "nbis-gene-5653"; transcript_id "gene-C7A06_RS33425"; Dbxref "Genbank:WP_000624622.1"; ID "nbis-exon-5912"; Name "WP_000624622.1"; Note "TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase."; Parent "gene-C7A06_RS33425"; gbkey "CDS"; gene "tnpB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_858152.1"; locus_tag "C7A06_RS33425"; product "IS66 family insertion sequence element accessory protein TnpB"; protein_id "WP_000624622.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
65 NZ_CP027601.1 Protein Homology CDS 11242 11589 . - 0 gene_id "nbis-gene-5653"; transcript_id "gene-C7A06_RS33425"; Dbxref "Genbank:WP_000624622.1"; ID "cds-WP_000624622.1-10"; Name "WP_000624622.1"; Note "TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase."; Parent "gene-C7A06_RS33425"; gbkey "CDS"; gene "tnpB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_858152.1"; locus_tag "C7A06_RS33425"; product "IS66 family insertion sequence element accessory protein TnpB"; protein_id "WP_000624622.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
66 NZ_CP027601.1 RefSeq gene 11589 12266 . - . gene_id "nbis-gene-5654"; ID "nbis-gene-5654"; Name "tnpA"; gbkey "Gene"; gene "tnpA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33430";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
67 NZ_CP027601.1 RefSeq transcript 11589 12266 . - . gene_id "nbis-gene-5654"; transcript_id "gene-C7A06_RS33430"; ID "gene-C7A06_RS33430"; Name "tnpA"; Parent "nbis-gene-5654"; gbkey "Gene"; gene "tnpA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33430"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
68 NZ_CP027601.1 Protein Homology exon 11589 12266 . - . gene_id "nbis-gene-5654"; transcript_id "gene-C7A06_RS33430"; Dbxref "Genbank:WP_001339397.1"; ID "nbis-exon-5913"; Name "WP_001339397.1"; Ontology_term "GO:0006313" "GO:0003677" "GO:0004803"; Parent "gene-C7A06_RS33430"; gbkey "CDS"; gene "tnpA"; go_function "DNA binding|0003677||IEA" "transposase activity|0004803||IEA"; go_process "transposition, DNA-mediated|0006313||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001743492.1"; locus_tag "C7A06_RS33430"; product "IS66-like element accessory protein TnpA"; protein_id "WP_001339397.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
69 NZ_CP027601.1 Protein Homology CDS 11589 12266 . - 0 gene_id "nbis-gene-5654"; transcript_id "gene-C7A06_RS33430"; Dbxref "Genbank:WP_001339397.1"; ID "cds-WP_001339397.1-10"; Name "WP_001339397.1"; Ontology_term "GO:0006313" "GO:0003677" "GO:0004803"; Parent "gene-C7A06_RS33430"; gbkey "CDS"; gene "tnpA"; go_function "DNA binding|0003677||IEA" "transposase activity|0004803||IEA"; go_process "transposition, DNA-mediated|0006313||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001743492.1"; locus_tag "C7A06_RS33430"; product "IS66-like element accessory protein TnpA"; protein_id "WP_001339397.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
70 NZ_CP027601.1 RefSeq gene 12319 12635 . - . gene_id "nbis-pseudogene-259"; ID "nbis-pseudogene-259"; Name "C7A06_RS33440"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33440"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "12319";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
71 NZ_CP027601.1 RefSeq transcript 12319 12635 . - . gene_id "nbis-pseudogene-259"; transcript_id "gene-C7A06_RS33440"; ID "gene-C7A06_RS33440"; Name "C7A06_RS33440"; Parent "nbis-pseudogene-259"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33440"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "12319";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
72 NZ_CP027601.1 Protein Homology exon 12319 12635 . - . gene_id "nbis-pseudogene-259"; transcript_id "gene-C7A06_RS33440"; ID "nbis-exon-5914"; Note "frameshifted; incomplete; partial in the middle of a contig; missing C-terminus"; Ontology_term "GO:0006313" "GO:0003677" "GO:0004803"; Parent "gene-C7A06_RS33440"; gbkey "CDS"; go_function "DNA binding|0003677||IEA" "transposase activity|0004803||IEA"; go_process "transposition, DNA-mediated|0006313||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1"; locus_tag "C7A06_RS33440"; partial "true"; product "transposase"; pseudo "true"; start_range "." "12319"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
73 NZ_CP027601.1 Protein Homology CDS 12319 12635 . - 0 gene_id "nbis-pseudogene-259"; transcript_id "gene-C7A06_RS33440"; ID "cds-C7A06_RS33440"; Note "frameshifted; incomplete; partial in the middle of a contig; missing C-terminus"; Ontology_term "GO:0006313" "GO:0003677" "GO:0004803"; Parent "gene-C7A06_RS33440"; gbkey "CDS"; go_function "DNA binding|0003677||IEA" "transposase activity|0004803||IEA"; go_process "transposition, DNA-mediated|0006313||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1"; locus_tag "C7A06_RS33440"; partial "true"; product "transposase"; pseudo "true"; start_range "." "12319"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
74 NZ_CP027601.1 RefSeq gene 12701 12994 . + . gene_id "nbis-pseudogene-368"; ID "nbis-pseudogene-368"; Name "C7A06_RS35240"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS35240"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "12701";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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diff changeset
75 NZ_CP027601.1 RefSeq transcript 12701 12994 . + . gene_id "nbis-pseudogene-368"; transcript_id "gene-C7A06_RS35240"; ID "gene-C7A06_RS35240"; Name "C7A06_RS35240"; Parent "nbis-pseudogene-368"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS35240"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "12701";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
76 NZ_CP027601.1 Protein Homology exon 12701 12994 . + . gene_id "nbis-pseudogene-368"; transcript_id "gene-C7A06_RS35240"; ID "nbis-exon-6228"; Note "incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS35240"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000077650.1"; locus_tag "C7A06_RS35240"; partial "true"; product "conjugal transfer protein TrbC"; pseudo "true"; start_range "." "12701"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
77 NZ_CP027601.1 Protein Homology CDS 12701 12994 . + 0 gene_id "nbis-pseudogene-368"; transcript_id "gene-C7A06_RS35240"; ID "cds-C7A06_RS35240"; Note "incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS35240"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000077650.1"; locus_tag "C7A06_RS35240"; partial "true"; product "conjugal transfer protein TrbC"; pseudo "true"; start_range "." "12701"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
78 NZ_CP027601.1 RefSeq gene 13215 15935 . - . gene_id "nbis-gene-5655"; ID "nbis-gene-5655"; Name "C7A06_RS33450"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33450";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
79 NZ_CP027601.1 RefSeq transcript 13215 15935 . - . gene_id "nbis-gene-5655"; transcript_id "gene-C7A06_RS33450"; ID "gene-C7A06_RS33450"; Name "C7A06_RS33450"; Parent "nbis-gene-5655"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33450"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
80 NZ_CP027601.1 Protein Homology exon 13215 15935 . - . gene_id "nbis-gene-5655"; transcript_id "gene-C7A06_RS33450"; Dbxref "Genbank:WP_000991402.1"; ID "nbis-exon-5915"; Name "WP_000991402.1"; Parent "gene-C7A06_RS33450"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000991381.1"; locus_tag "C7A06_RS33450"; product "relaxase/mobilization nuclease domain-containing protein"; protein_id "WP_000991402.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
81 NZ_CP027601.1 Protein Homology CDS 13215 15935 . - 0 gene_id "nbis-gene-5655"; transcript_id "gene-C7A06_RS33450"; Dbxref "Genbank:WP_000991402.1"; ID "cds-WP_000991402.1"; Name "WP_000991402.1"; Parent "gene-C7A06_RS33450"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000991381.1"; locus_tag "C7A06_RS33450"; product "relaxase/mobilization nuclease domain-containing protein"; protein_id "WP_000991402.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
82 NZ_CP027601.1 RefSeq gene 15947 16279 . - . gene_id "nbis-gene-5656"; ID "nbis-gene-5656"; Name "C7A06_RS33455"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33455";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
83 NZ_CP027601.1 RefSeq transcript 15947 16279 . - . gene_id "nbis-gene-5656"; transcript_id "gene-C7A06_RS33455"; ID "gene-C7A06_RS33455"; Name "C7A06_RS33455"; Parent "nbis-gene-5656"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33455"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
84 NZ_CP027601.1 Protein Homology exon 15947 16279 . - . gene_id "nbis-gene-5656"; transcript_id "gene-C7A06_RS33455"; Dbxref "Genbank:WP_001291056.1"; ID "nbis-exon-5916"; Name "WP_001291056.1"; Parent "gene-C7A06_RS33455"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001291057.1"; locus_tag "C7A06_RS33455"; product "DUF6290 family protein"; protein_id "WP_001291056.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
85 NZ_CP027601.1 Protein Homology CDS 15947 16279 . - 0 gene_id "nbis-gene-5656"; transcript_id "gene-C7A06_RS33455"; Dbxref "Genbank:WP_001291056.1"; ID "cds-WP_001291056.1"; Name "WP_001291056.1"; Parent "gene-C7A06_RS33455"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001291057.1"; locus_tag "C7A06_RS33455"; product "DUF6290 family protein"; protein_id "WP_001291056.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
86 NZ_CP027601.1 RefSeq gene 16511 16846 . + . gene_id "nbis-gene-5657"; ID "nbis-gene-5657"; Name "C7A06_RS33460"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33460";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
87 NZ_CP027601.1 RefSeq transcript 16511 16846 . + . gene_id "nbis-gene-5657"; transcript_id "gene-C7A06_RS33460"; ID "gene-C7A06_RS33460"; Name "C7A06_RS33460"; Parent "nbis-gene-5657"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33460"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
88 NZ_CP027601.1 Protein Homology exon 16511 16846 . + . gene_id "nbis-gene-5657"; transcript_id "gene-C7A06_RS33460"; Dbxref "Genbank:WP_000157095.1"; ID "nbis-exon-5917"; Name "WP_000157095.1"; Parent "gene-C7A06_RS33460"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000157082.1"; locus_tag "C7A06_RS33460"; product "molybdopterin-guanine dinucleotide biosynthesis protein MobC"; protein_id "WP_000157095.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
89 NZ_CP027601.1 Protein Homology CDS 16511 16846 . + 0 gene_id "nbis-gene-5657"; transcript_id "gene-C7A06_RS33460"; Dbxref "Genbank:WP_000157095.1"; ID "cds-WP_000157095.1"; Name "WP_000157095.1"; Parent "gene-C7A06_RS33460"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000157082.1"; locus_tag "C7A06_RS33460"; product "molybdopterin-guanine dinucleotide biosynthesis protein MobC"; protein_id "WP_000157095.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
90 NZ_CP027601.1 RefSeq gene 16932 17780 . - . gene_id "nbis-gene-5658"; ID "nbis-gene-5658"; Name "C7A06_RS33465"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33465";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
91 NZ_CP027601.1 RefSeq transcript 16932 17780 . - . gene_id "nbis-gene-5658"; transcript_id "gene-C7A06_RS33465"; ID "gene-C7A06_RS33465"; Name "C7A06_RS33465"; Parent "nbis-gene-5658"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33465"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
92 NZ_CP027601.1 Protein Homology exon 16932 17780 . - . gene_id "nbis-gene-5658"; transcript_id "gene-C7A06_RS33465"; Dbxref "Genbank:WP_001341408.1"; ID "nbis-exon-5918"; Name "WP_001341408.1"; Parent "gene-C7A06_RS33465"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001401764.1"; locus_tag "C7A06_RS33465"; product "DUF4942 domain-containing protein"; protein_id "WP_001341408.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
93 NZ_CP027601.1 Protein Homology CDS 16932 17780 . - 0 gene_id "nbis-gene-5658"; transcript_id "gene-C7A06_RS33465"; Dbxref "Genbank:WP_001341408.1"; ID "cds-WP_001341408.1"; Name "WP_001341408.1"; Parent "gene-C7A06_RS33465"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001401764.1"; locus_tag "C7A06_RS33465"; product "DUF4942 domain-containing protein"; protein_id "WP_001341408.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
94 NZ_CP027601.1 RefSeq gene 17973 18299 . + . gene_id "nbis-gene-5659"; ID "nbis-gene-5659"; Name "C7A06_RS33470"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33470";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
95 NZ_CP027601.1 RefSeq transcript 17973 18299 . + . gene_id "nbis-gene-5659"; transcript_id "gene-C7A06_RS33470"; ID "gene-C7A06_RS33470"; Name "C7A06_RS33470"; Parent "nbis-gene-5659"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33470"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
96 NZ_CP027601.1 Protein Homology exon 17973 18299 . + . gene_id "nbis-gene-5659"; transcript_id "gene-C7A06_RS33470"; Dbxref "Genbank:WP_199852433.1"; ID "nbis-exon-5919"; Name "WP_199852433.1"; Parent "gene-C7A06_RS33470"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001431784.1"; locus_tag "C7A06_RS33470"; product "hypothetical protein"; protein_id "WP_199852433.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
97 NZ_CP027601.1 Protein Homology CDS 17973 18299 . + 0 gene_id "nbis-gene-5659"; transcript_id "gene-C7A06_RS33470"; Dbxref "Genbank:WP_199852433.1"; ID "cds-WP_199852433.1"; Name "WP_199852433.1"; Parent "gene-C7A06_RS33470"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001431784.1"; locus_tag "C7A06_RS33470"; product "hypothetical protein"; protein_id "WP_199852433.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
98 NZ_CP027601.1 RefSeq gene 18358 18609 . + . gene_id "nbis-gene-5660"; ID "nbis-gene-5660"; Name "C7A06_RS33475"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33475";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
99 NZ_CP027601.1 RefSeq transcript 18358 18609 . + . gene_id "nbis-gene-5660"; transcript_id "gene-C7A06_RS33475"; ID "gene-C7A06_RS33475"; Name "C7A06_RS33475"; Parent "nbis-gene-5660"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33475"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
100 NZ_CP027601.1 Protein Homology exon 18358 18609 . + . gene_id "nbis-gene-5660"; transcript_id "gene-C7A06_RS33475"; Dbxref "Genbank:WP_000148286.1"; ID "nbis-exon-5920"; Name "WP_000148286.1"; Parent "gene-C7A06_RS33475"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_003980153.1"; locus_tag "C7A06_RS33475"; product "helix-turn-helix domain-containing protein"; protein_id "WP_000148286.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
101 NZ_CP027601.1 Protein Homology CDS 18358 18609 . + 0 gene_id "nbis-gene-5660"; transcript_id "gene-C7A06_RS33475"; Dbxref "Genbank:WP_000148286.1"; ID "cds-WP_000148286.1"; Name "WP_000148286.1"; Parent "gene-C7A06_RS33475"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_003980153.1"; locus_tag "C7A06_RS33475"; product "helix-turn-helix domain-containing protein"; protein_id "WP_000148286.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
102 NZ_CP027601.1 RefSeq gene 18640 19539 . - . gene_id "nbis-gene-5661"; ID "nbis-gene-5661"; Name "C7A06_RS33480"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33480";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
103 NZ_CP027601.1 RefSeq transcript 18640 19539 . - . gene_id "nbis-gene-5661"; transcript_id "gene-C7A06_RS33480"; ID "gene-C7A06_RS33480"; Name "C7A06_RS33480"; Parent "nbis-gene-5661"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33480"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
104 NZ_CP027601.1 Protein Homology exon 18640 19539 . - . gene_id "nbis-gene-5661"; transcript_id "gene-C7A06_RS33480"; Dbxref "Genbank:WP_032348834.1"; ID "nbis-exon-5921"; Name "WP_032348834.1"; Parent "gene-C7A06_RS33480"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000038335.1"; locus_tag "C7A06_RS33480"; product "Rpn family recombination-promoting nuclease/putative transposase"; protein_id "WP_032348834.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
105 NZ_CP027601.1 Protein Homology CDS 18640 19539 . - 0 gene_id "nbis-gene-5661"; transcript_id "gene-C7A06_RS33480"; Dbxref "Genbank:WP_032348834.1"; ID "cds-WP_032348834.1"; Name "WP_032348834.1"; Parent "gene-C7A06_RS33480"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000038335.1"; locus_tag "C7A06_RS33480"; product "Rpn family recombination-promoting nuclease/putative transposase"; protein_id "WP_032348834.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
106 NZ_CP027601.1 RefSeq gene 19604 19870 . - . gene_id "nbis-gene-5662"; ID "nbis-gene-5662"; Name "C7A06_RS33485"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33485";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
107 NZ_CP027601.1 RefSeq transcript 19604 19870 . - . gene_id "nbis-gene-5662"; transcript_id "gene-C7A06_RS33485"; ID "gene-C7A06_RS33485"; Name "C7A06_RS33485"; Parent "nbis-gene-5662"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33485"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
108 NZ_CP027601.1 Protein Homology exon 19604 19870 . - . gene_id "nbis-gene-5662"; transcript_id "gene-C7A06_RS33485"; Dbxref "Genbank:WP_001247865.1"; ID "nbis-exon-5922"; Name "WP_001247865.1"; Parent "gene-C7A06_RS33485"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001247860.1"; locus_tag "C7A06_RS33485"; product "hypothetical protein"; protein_id "WP_001247865.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
109 NZ_CP027601.1 Protein Homology CDS 19604 19870 . - 0 gene_id "nbis-gene-5662"; transcript_id "gene-C7A06_RS33485"; Dbxref "Genbank:WP_001247865.1"; ID "cds-WP_001247865.1"; Name "WP_001247865.1"; Parent "gene-C7A06_RS33485"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001247860.1"; locus_tag "C7A06_RS33485"; product "hypothetical protein"; protein_id "WP_001247865.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
110 NZ_CP027601.1 RefSeq gene 19963 20397 . - . gene_id "nbis-gene-5663"; ID "nbis-gene-5663"; Name "C7A06_RS33490"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33490";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
111 NZ_CP027601.1 RefSeq transcript 19963 20397 . - . gene_id "nbis-gene-5663"; transcript_id "gene-C7A06_RS33490"; ID "gene-C7A06_RS33490"; Name "C7A06_RS33490"; Parent "nbis-gene-5663"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33490"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
112 NZ_CP027601.1 Protein Homology exon 19963 20397 . - . gene_id "nbis-gene-5663"; transcript_id "gene-C7A06_RS33490"; Dbxref "Genbank:WP_000218854.1"; ID "nbis-exon-5923"; Name "WP_000218854.1"; Parent "gene-C7A06_RS33490"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000218847.1"; locus_tag "C7A06_RS33490"; product "hypothetical protein"; protein_id "WP_000218854.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
113 NZ_CP027601.1 Protein Homology CDS 19963 20397 . - 0 gene_id "nbis-gene-5663"; transcript_id "gene-C7A06_RS33490"; Dbxref "Genbank:WP_000218854.1"; ID "cds-WP_000218854.1"; Name "WP_000218854.1"; Parent "gene-C7A06_RS33490"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000218847.1"; locus_tag "C7A06_RS33490"; product "hypothetical protein"; protein_id "WP_000218854.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
114 NZ_CP027601.1 RefSeq gene 20503 21123 . + . gene_id "nbis-gene-5805"; ID "nbis-gene-5805"; Name "C7A06_RS34645"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS34645";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
115 NZ_CP027601.1 RefSeq transcript 20503 21123 . + . gene_id "nbis-gene-5805"; transcript_id "gene-C7A06_RS34645"; ID "gene-C7A06_RS34645"; Name "C7A06_RS34645"; Parent "nbis-gene-5805"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS34645"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
116 NZ_CP027601.1 GeneMarkS-2+ exon 20503 21123 . + . gene_id "nbis-gene-5805"; transcript_id "gene-C7A06_RS34645"; Dbxref "Genbank:WP_162137195.1"; ID "nbis-exon-6111"; Name "WP_162137195.1"; Parent "gene-C7A06_RS34645"; gbkey "CDS"; inference "COORDINATES: ab initio prediction:GeneMarkS-2+"; locus_tag "C7A06_RS34645"; product "hypothetical protein"; protein_id "WP_162137195.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
117 NZ_CP027601.1 GeneMarkS-2+ CDS 20503 21123 . + 0 gene_id "nbis-gene-5805"; transcript_id "gene-C7A06_RS34645"; Dbxref "Genbank:WP_162137195.1"; ID "cds-WP_162137195.1"; Name "WP_162137195.1"; Parent "gene-C7A06_RS34645"; gbkey "CDS"; inference "COORDINATES: ab initio prediction:GeneMarkS-2+"; locus_tag "C7A06_RS34645"; product "hypothetical protein"; protein_id "WP_162137195.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
118 NZ_CP027601.1 RefSeq gene 21125 21625 . - . gene_id "nbis-gene-5664"; ID "nbis-gene-5664"; Name "C7A06_RS33505"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33505";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
119 NZ_CP027601.1 RefSeq transcript 21125 21625 . - . gene_id "nbis-gene-5664"; transcript_id "gene-C7A06_RS33505"; ID "gene-C7A06_RS33505"; Name "C7A06_RS33505"; Parent "nbis-gene-5664"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33505"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
120 NZ_CP027601.1 Protein Homology exon 21125 21625 . - . gene_id "nbis-gene-5664"; transcript_id "gene-C7A06_RS33505"; Dbxref "Genbank:WP_000117628.1"; ID "nbis-exon-5924"; Name "WP_000117628.1"; Parent "gene-C7A06_RS33505"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000117633.1"; locus_tag "C7A06_RS33505"; product "antirestriction protein ArdA"; protein_id "WP_000117628.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
121 NZ_CP027601.1 Protein Homology CDS 21125 21625 . - 0 gene_id "nbis-gene-5664"; transcript_id "gene-C7A06_RS33505"; Dbxref "Genbank:WP_000117628.1"; ID "cds-WP_000117628.1"; Name "WP_000117628.1"; Parent "gene-C7A06_RS33505"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000117633.1"; locus_tag "C7A06_RS33505"; product "antirestriction protein ArdA"; protein_id "WP_000117628.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
122 NZ_CP027601.1 RefSeq gene 22087 22684 . - . gene_id "nbis-pseudogene-306"; ID "nbis-pseudogene-306"; Name "C7A06_RS34650"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS34650"; original_biotype "pseudogene"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
123 NZ_CP027601.1 RefSeq transcript 22087 22684 . - . gene_id "nbis-pseudogene-306"; transcript_id "gene-C7A06_RS34650"; ID "gene-C7A06_RS34650"; Name "C7A06_RS34650"; Parent "nbis-pseudogene-306"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS34650"; original_biotype "mrna"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
124 NZ_CP027601.1 Protein Homology exon 22087 22684 . - . gene_id "nbis-pseudogene-306"; transcript_id "gene-C7A06_RS34650"; ID "nbis-exon-6112"; Note "frameshifted"; Parent "gene-C7A06_RS34650"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000978013.1"; locus_tag "C7A06_RS34650"; product "hypothetical protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
125 NZ_CP027601.1 Protein Homology CDS 22087 22684 . - 0 gene_id "nbis-pseudogene-306"; transcript_id "gene-C7A06_RS34650"; ID "cds-C7A06_RS34650"; Note "frameshifted"; Parent "gene-C7A06_RS34650"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000978013.1"; locus_tag "C7A06_RS34650"; product "hypothetical protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
126 NZ_CP027601.1 RefSeq gene 22681 23400 . - . gene_id "nbis-gene-5665"; ID "nbis-gene-5665"; Name "C7A06_RS33520"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33520";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
127 NZ_CP027601.1 RefSeq transcript 22681 23400 . - . gene_id "nbis-gene-5665"; transcript_id "gene-C7A06_RS33520"; ID "gene-C7A06_RS33520"; Name "C7A06_RS33520"; Parent "nbis-gene-5665"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33520"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
128 NZ_CP027601.1 Protein Homology exon 22681 23400 . - . gene_id "nbis-gene-5665"; transcript_id "gene-C7A06_RS33520"; Dbxref "Genbank:WP_001276261.1"; ID "nbis-exon-5925"; Name "WP_001276261.1"; Parent "gene-C7A06_RS33520"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001723065.1"; locus_tag "C7A06_RS33520"; product "plasmid SOS inhibition protein A"; protein_id "WP_001276261.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
129 NZ_CP027601.1 Protein Homology CDS 22681 23400 . - 0 gene_id "nbis-gene-5665"; transcript_id "gene-C7A06_RS33520"; Dbxref "Genbank:WP_001276261.1"; ID "cds-WP_001276261.1"; Name "WP_001276261.1"; Parent "gene-C7A06_RS33520"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001723065.1"; locus_tag "C7A06_RS33520"; product "plasmid SOS inhibition protein A"; protein_id "WP_001276261.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
130 NZ_CP027601.1 RefSeq gene 23397 23645 . - . gene_id "nbis-pseudogene-307"; ID "nbis-pseudogene-307"; Name "psiB"; end_range "23645" "."; gbkey "Gene"; gene "psiB"; gene_biotype "pseudogene"; locus_tag "C7A06_RS34655"; original_biotype "pseudogene"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
131 NZ_CP027601.1 RefSeq transcript 23397 23645 . - . gene_id "nbis-pseudogene-307"; transcript_id "gene-C7A06_RS34655"; ID "gene-C7A06_RS34655"; Name "psiB"; Parent "nbis-pseudogene-307"; end_range "23645" "."; gbkey "Gene"; gene "psiB"; gene_biotype "pseudogene"; locus_tag "C7A06_RS34655"; original_biotype "mrna"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
132 NZ_CP027601.1 Protein Homology exon 23397 23645 . - . gene_id "nbis-pseudogene-307"; transcript_id "gene-C7A06_RS34655"; ID "nbis-exon-6113"; Note "incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS34655"; end_range "23645" "."; gbkey "CDS"; gene "psiB"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000845953.1"; locus_tag "C7A06_RS34655"; partial "true"; product "conjugation system SOS inhibitor PsiB"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
133 NZ_CP027601.1 Protein Homology CDS 23397 23645 . - 0 gene_id "nbis-pseudogene-307"; transcript_id "gene-C7A06_RS34655"; ID "cds-C7A06_RS34655"; Note "incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS34655"; end_range "23645" "."; gbkey "CDS"; gene "psiB"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000845953.1"; locus_tag "C7A06_RS34655"; partial "true"; product "conjugation system SOS inhibitor PsiB"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
134 NZ_CP027601.1 RefSeq gene 23640 23879 . - . gene_id "nbis-pseudogene-308"; ID "nbis-pseudogene-308"; Name "C7A06_RS34660"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS34660"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "23640";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
135 NZ_CP027601.1 RefSeq transcript 23640 23879 . - . gene_id "nbis-pseudogene-308"; transcript_id "gene-C7A06_RS34660"; ID "gene-C7A06_RS34660"; Name "C7A06_RS34660"; Parent "nbis-pseudogene-308"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS34660"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "23640";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
136 NZ_CP027601.1 Protein Homology exon 23640 23879 . - . gene_id "nbis-pseudogene-308"; transcript_id "gene-C7A06_RS34660"; ID "nbis-exon-6114"; Note "incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS34660"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_858335.1"; locus_tag "C7A06_RS34660"; partial "true"; product "hypothetical protein"; pseudo "true"; start_range "." "23640"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
137 NZ_CP027601.1 Protein Homology CDS 23640 23879 . - 0 gene_id "nbis-pseudogene-308"; transcript_id "gene-C7A06_RS34660"; ID "cds-C7A06_RS34660"; Note "incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS34660"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_858335.1"; locus_tag "C7A06_RS34660"; partial "true"; product "hypothetical protein"; pseudo "true"; start_range "." "23640"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
138 NZ_CP027601.1 RefSeq gene 23924 24410 . - . gene_id "nbis-pseudogene-260"; ID "nbis-pseudogene-260"; Name "C7A06_RS33530"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33530"; original_biotype "pseudogene"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
139 NZ_CP027601.1 RefSeq transcript 23924 24410 . - . gene_id "nbis-pseudogene-260"; transcript_id "gene-C7A06_RS33530"; ID "gene-C7A06_RS33530"; Name "C7A06_RS33530"; Parent "nbis-pseudogene-260"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33530"; original_biotype "mrna"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
140 NZ_CP027601.1 Protein Homology exon 23924 24410 . - . gene_id "nbis-pseudogene-260"; transcript_id "gene-C7A06_RS33530"; ID "nbis-exon-5926"; Note "frameshifted"; Parent "gene-C7A06_RS33530"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052646.1"; locus_tag "C7A06_RS33530"; product "DUF1380 domain-containing protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
141 NZ_CP027601.1 Protein Homology CDS 23924 24410 . - 0 gene_id "nbis-pseudogene-260"; transcript_id "gene-C7A06_RS33530"; ID "cds-C7A06_RS33530"; Note "frameshifted"; Parent "gene-C7A06_RS33530"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052646.1"; locus_tag "C7A06_RS33530"; product "DUF1380 domain-containing protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
142 NZ_CP027601.1 RefSeq gene 24370 24588 . - . gene_id "nbis-gene-5666"; ID "nbis-gene-5666"; Name "C7A06_RS33535"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33535";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
143 NZ_CP027601.1 RefSeq transcript 24370 24588 . - . gene_id "nbis-gene-5666"; transcript_id "gene-C7A06_RS33535"; ID "gene-C7A06_RS33535"; Name "C7A06_RS33535"; Parent "nbis-gene-5666"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33535"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
144 NZ_CP027601.1 Protein Homology exon 24370 24588 . - . gene_id "nbis-gene-5666"; transcript_id "gene-C7A06_RS33535"; Dbxref "Genbank:WP_001443814.1"; ID "nbis-exon-5927"; Name "WP_001443814.1"; Parent "gene-C7A06_RS33535"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_858332.1"; locus_tag "C7A06_RS33535"; product "hypothetical protein"; protein_id "WP_001443814.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
145 NZ_CP027601.1 Protein Homology CDS 24370 24588 . - 0 gene_id "nbis-gene-5666"; transcript_id "gene-C7A06_RS33535"; Dbxref "Genbank:WP_001443814.1"; ID "cds-WP_001443814.1"; Name "WP_001443814.1"; Parent "gene-C7A06_RS33535"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_858332.1"; locus_tag "C7A06_RS33535"; product "hypothetical protein"; protein_id "WP_001443814.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
146 NZ_CP027601.1 RefSeq gene 24588 25271 . - . gene_id "nbis-gene-5667"; ID "nbis-gene-5667"; Name "C7A06_RS33540"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33540";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
147 NZ_CP027601.1 RefSeq transcript 24588 25271 . - . gene_id "nbis-gene-5667"; transcript_id "gene-C7A06_RS33540"; ID "gene-C7A06_RS33540"; Name "C7A06_RS33540"; Parent "nbis-gene-5667"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33540"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
148 NZ_CP027601.1 Protein Homology exon 24588 25271 . - . gene_id "nbis-gene-5667"; transcript_id "gene-C7A06_RS33540"; Dbxref "Genbank:WP_000086167.1"; ID "nbis-exon-5928"; Name "WP_000086167.1"; Parent "gene-C7A06_RS33540"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_858331.2"; locus_tag "C7A06_RS33540"; product "DNA methylase"; protein_id "WP_000086167.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
149 NZ_CP027601.1 Protein Homology CDS 24588 25271 . - 0 gene_id "nbis-gene-5667"; transcript_id "gene-C7A06_RS33540"; Dbxref "Genbank:WP_000086167.1"; ID "cds-WP_000086167.1"; Name "WP_000086167.1"; Parent "gene-C7A06_RS33540"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_858331.2"; locus_tag "C7A06_RS33540"; product "DNA methylase"; protein_id "WP_000086167.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
150 NZ_CP027601.1 RefSeq gene 25347 25658 . - . gene_id "nbis-gene-5668"; ID "nbis-gene-5668"; Name "C7A06_RS33545"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33545";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
151 NZ_CP027601.1 RefSeq transcript 25347 25658 . - . gene_id "nbis-gene-5668"; transcript_id "gene-C7A06_RS33545"; ID "gene-C7A06_RS33545"; Name "C7A06_RS33545"; Parent "nbis-gene-5668"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33545"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
152 NZ_CP027601.1 Protein Homology exon 25347 25658 . - . gene_id "nbis-gene-5668"; transcript_id "gene-C7A06_RS33545"; Dbxref "Genbank:WP_012680995.1"; ID "nbis-exon-5929"; Name "WP_012680995.1"; Parent "gene-C7A06_RS33545"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_858330.2"; locus_tag "C7A06_RS33545"; product "hypothetical protein"; protein_id "WP_012680995.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
153 NZ_CP027601.1 Protein Homology CDS 25347 25658 . - 0 gene_id "nbis-gene-5668"; transcript_id "gene-C7A06_RS33545"; Dbxref "Genbank:WP_012680995.1"; ID "cds-WP_012680995.1-2"; Name "WP_012680995.1"; Parent "gene-C7A06_RS33545"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_858330.2"; locus_tag "C7A06_RS33545"; product "hypothetical protein"; protein_id "WP_012680995.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
154 NZ_CP027601.1 RefSeq gene 25655 26557 . - . gene_id "nbis-gene-5669"; ID "nbis-gene-5669"; Name "C7A06_RS33550"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33550";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
155 NZ_CP027601.1 RefSeq transcript 25655 26557 . - . gene_id "nbis-gene-5669"; transcript_id "gene-C7A06_RS33550"; ID "gene-C7A06_RS33550"; Name "C7A06_RS33550"; Parent "nbis-gene-5669"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33550"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
156 NZ_CP027601.1 Protein Homology exon 25655 26557 . - . gene_id "nbis-gene-5669"; transcript_id "gene-C7A06_RS33550"; Dbxref "Genbank:WP_077249722.1"; ID "nbis-exon-5930"; Name "WP_077249722.1"; Parent "gene-C7A06_RS33550"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052643.1"; locus_tag "C7A06_RS33550"; product "DUF1281 domain-containing protein"; protein_id "WP_077249722.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
157 NZ_CP027601.1 Protein Homology CDS 25655 26557 . - 0 gene_id "nbis-gene-5669"; transcript_id "gene-C7A06_RS33550"; Dbxref "Genbank:WP_077249722.1"; ID "cds-WP_077249722.1"; Name "WP_077249722.1"; Parent "gene-C7A06_RS33550"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052643.1"; locus_tag "C7A06_RS33550"; product "DUF1281 domain-containing protein"; protein_id "WP_077249722.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
158 NZ_CP027601.1 RefSeq gene 26830 27789 . + . gene_id "nbis-gene-5670"; ID "nbis-gene-5670"; Name "C7A06_RS33555"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33555";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
159 NZ_CP027601.1 RefSeq transcript 26830 27789 . + . gene_id "nbis-gene-5670"; transcript_id "gene-C7A06_RS33555"; ID "gene-C7A06_RS33555"; Name "C7A06_RS33555"; Parent "nbis-gene-5670"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33555"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
160 NZ_CP027601.1 Protein Homology exon 26830 27789 . + . gene_id "nbis-gene-5670"; transcript_id "gene-C7A06_RS33555"; Dbxref "Genbank:WP_000921957.1"; ID "nbis-exon-5931"; Name "WP_000921957.1"; Parent "gene-C7A06_RS33555"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_858328.1"; locus_tag "C7A06_RS33555"; product "plasmid segregation protein ParM"; protein_id "WP_000921957.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
161 NZ_CP027601.1 Protein Homology CDS 26830 27789 . + 0 gene_id "nbis-gene-5670"; transcript_id "gene-C7A06_RS33555"; Dbxref "Genbank:WP_000921957.1"; ID "cds-WP_000921957.1"; Name "WP_000921957.1"; Parent "gene-C7A06_RS33555"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_858328.1"; locus_tag "C7A06_RS33555"; product "plasmid segregation protein ParM"; protein_id "WP_000921957.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
162 NZ_CP027601.1 RefSeq gene 27789 28184 . + . gene_id "nbis-gene-5671"; ID "nbis-gene-5671"; Name "C7A06_RS33560"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33560";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
163 NZ_CP027601.1 RefSeq transcript 27789 28184 . + . gene_id "nbis-gene-5671"; transcript_id "gene-C7A06_RS33560"; ID "gene-C7A06_RS33560"; Name "C7A06_RS33560"; Parent "nbis-gene-5671"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33560"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
164 NZ_CP027601.1 Protein Homology exon 27789 28184 . + . gene_id "nbis-gene-5671"; transcript_id "gene-C7A06_RS33560"; Dbxref "Genbank:WP_000445934.1"; ID "nbis-exon-5932"; Name "WP_000445934.1"; Parent "gene-C7A06_RS33560"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_858327.1"; locus_tag "C7A06_RS33560"; product "plasmid partitioning/stability family protein"; protein_id "WP_000445934.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
165 NZ_CP027601.1 Protein Homology CDS 27789 28184 . + 0 gene_id "nbis-gene-5671"; transcript_id "gene-C7A06_RS33560"; Dbxref "Genbank:WP_000445934.1"; ID "cds-WP_000445934.1"; Name "WP_000445934.1"; Parent "gene-C7A06_RS33560"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_858327.1"; locus_tag "C7A06_RS33560"; product "plasmid partitioning/stability family protein"; protein_id "WP_000445934.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
166 NZ_CP027601.1 RefSeq gene 28264 29031 . - . gene_id "nbis-pseudogene-261"; ID "nbis-pseudogene-261"; Name "C7A06_RS33565"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33565"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "28264";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
167 NZ_CP027601.1 RefSeq transcript 28264 29031 . - . gene_id "nbis-pseudogene-261"; transcript_id "gene-C7A06_RS33565"; ID "gene-C7A06_RS33565"; Name "C7A06_RS33565"; Parent "nbis-pseudogene-261"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33565"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "28264";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
168 NZ_CP027601.1 Protein Homology exon 28264 29031 . - . gene_id "nbis-pseudogene-261"; transcript_id "gene-C7A06_RS33565"; ID "nbis-exon-5933"; Note "frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS33565"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1"; locus_tag "C7A06_RS33565"; partial "true"; product "IS3 family transposase"; pseudo "true"; start_range "." "28264"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
169 NZ_CP027601.1 Protein Homology CDS 28264 29031 . - 0 gene_id "nbis-pseudogene-261"; transcript_id "gene-C7A06_RS33565"; ID "cds-C7A06_RS33565"; Note "frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS33565"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1"; locus_tag "C7A06_RS33565"; partial "true"; product "IS3 family transposase"; pseudo "true"; start_range "." "28264"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
170 NZ_CP027601.1 RefSeq gene 29145 29534 . - . gene_id "nbis-gene-5672"; ID "nbis-gene-5672"; Name "C7A06_RS33570"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33570";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
171 NZ_CP027601.1 RefSeq transcript 29145 29534 . - . gene_id "nbis-gene-5672"; transcript_id "gene-C7A06_RS33570"; ID "gene-C7A06_RS33570"; Name "C7A06_RS33570"; Parent "nbis-gene-5672"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33570"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
172 NZ_CP027601.1 Protein Homology exon 29145 29534 . - . gene_id "nbis-gene-5672"; transcript_id "gene-C7A06_RS33570"; Dbxref "Genbank:WP_001172748.1"; ID "nbis-exon-5934"; Name "WP_001172748.1"; Ontology_term "GO:0022900" "GO:0005506" "GO:0009055" "GO:0020037" "GO:0042597"; Parent "gene-C7A06_RS33570"; gbkey "CDS"; go_component "periplasmic space|0042597||IEA"; go_function "iron ion binding|0005506||IEA" "electron transfer activity|0009055||IEA" "heme binding|0020037||IEA"; go_process "electron transport chain|0022900||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_016242783.1"; locus_tag "C7A06_RS33570"; product "cytochrome b562"; protein_id "WP_001172748.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
173 NZ_CP027601.1 Protein Homology CDS 29145 29534 . - 0 gene_id "nbis-gene-5672"; transcript_id "gene-C7A06_RS33570"; Dbxref "Genbank:WP_001172748.1"; ID "cds-WP_001172748.1"; Name "WP_001172748.1"; Ontology_term "GO:0022900" "GO:0005506" "GO:0009055" "GO:0020037" "GO:0042597"; Parent "gene-C7A06_RS33570"; gbkey "CDS"; go_component "periplasmic space|0042597||IEA"; go_function "iron ion binding|0005506||IEA" "electron transfer activity|0009055||IEA" "heme binding|0020037||IEA"; go_process "electron transport chain|0022900||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_016242783.1"; locus_tag "C7A06_RS33570"; product "cytochrome b562"; protein_id "WP_001172748.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
174 NZ_CP027601.1 RefSeq gene 29578 31788 . - . gene_id "nbis-gene-5673"; ID "nbis-gene-5673"; Name "katP"; gbkey "Gene"; gene "katP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33575";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
175 NZ_CP027601.1 RefSeq transcript 29578 31788 . - . gene_id "nbis-gene-5673"; transcript_id "gene-C7A06_RS33575"; ID "gene-C7A06_RS33575"; Name "katP"; Parent "nbis-gene-5673"; gbkey "Gene"; gene "katP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33575"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
176 NZ_CP027601.1 Protein Homology exon 29578 31788 . - . gene_id "nbis-gene-5673"; transcript_id "gene-C7A06_RS33575"; Dbxref "Genbank:WP_000592771.1"; ID "nbis-exon-5935"; Name "WP_000592771.1"; Parent "gene-C7A06_RS33575"; gbkey "CDS"; gene "katP"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000592771.1"; locus_tag "C7A06_RS33575"; product "catalase/peroxidase KatP"; protein_id "WP_000592771.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
177 NZ_CP027601.1 Protein Homology CDS 29578 31788 . - 0 gene_id "nbis-gene-5673"; transcript_id "gene-C7A06_RS33575"; Dbxref "Genbank:WP_000592771.1"; ID "cds-WP_000592771.1"; Name "WP_000592771.1"; Parent "gene-C7A06_RS33575"; gbkey "CDS"; gene "katP"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000592771.1"; locus_tag "C7A06_RS33575"; product "catalase/peroxidase KatP"; protein_id "WP_000592771.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
178 NZ_CP027601.1 RefSeq gene 31961 33174 . - . gene_id "nbis-gene-5674"; ID "nbis-gene-5674"; Name "C7A06_RS33585"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33585";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
179 NZ_CP027601.1 RefSeq transcript 31961 33174 . - . gene_id "nbis-gene-5674"; transcript_id "gene-C7A06_RS33585"; ID "gene-C7A06_RS33585"; Name "C7A06_RS33585"; Parent "nbis-gene-5674"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33585"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
180 NZ_CP027601.1 Protein Homology exon 31961 33174 . - . gene_id "nbis-gene-5674"; transcript_id "gene-C7A06_RS33585"; Dbxref "Genbank:WP_162908515.1"; ID "nbis-exon-5936"; Name "WP_162908515.1"; Note "programmed frameshift"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33585"; exception "ribosomal slippage"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_086558238.1"; locus_tag "C7A06_RS33585"; product "IS3 family transposase"; protein_id "WP_162908515.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
181 NZ_CP027601.1 Protein Homology CDS 31961 33174 . - 2 gene_id "nbis-gene-5674"; transcript_id "gene-C7A06_RS33585"; Dbxref "Genbank:WP_162908515.1"; ID "cds-WP_162908515.1"; Name "WP_162908515.1"; Note "programmed frameshift"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33585"; exception "ribosomal slippage"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_086558238.1"; locus_tag "C7A06_RS33585"; product "IS3 family transposase"; protein_id "WP_162908515.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
182 NZ_CP027601.1 RefSeq gene 33980 34957 . + . gene_id "nbis-gene-5675"; ID "nbis-gene-5675"; Name "C7A06_RS33590"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33590";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
183 NZ_CP027601.1 RefSeq transcript 33980 34957 . + . gene_id "nbis-gene-5675"; transcript_id "gene-C7A06_RS33590"; ID "gene-C7A06_RS33590"; Name "C7A06_RS33590"; Parent "nbis-gene-5675"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33590"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
184 NZ_CP027601.1 Protein Homology exon 33980 34957 . + . gene_id "nbis-gene-5675"; transcript_id "gene-C7A06_RS33590"; Dbxref "Genbank:WP_000361610.1"; ID "nbis-exon-5937"; Name "WP_000361610.1"; Ontology_term "GO:0006270" "GO:0003887"; Parent "gene-C7A06_RS33590"; gbkey "CDS"; go_function "DNA-directed DNA polymerase activity|0003887||IEA"; go_process "DNA replication initiation|0006270||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052630.2"; locus_tag "C7A06_RS33590"; product "RepB family plasmid replication initiator protein"; protein_id "WP_000361610.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
185 NZ_CP027601.1 Protein Homology CDS 33980 34957 . + 0 gene_id "nbis-gene-5675"; transcript_id "gene-C7A06_RS33590"; Dbxref "Genbank:WP_000361610.1"; ID "cds-WP_000361610.1"; Name "WP_000361610.1"; Ontology_term "GO:0006270" "GO:0003887"; Parent "gene-C7A06_RS33590"; gbkey "CDS"; go_function "DNA-directed DNA polymerase activity|0003887||IEA"; go_process "DNA replication initiation|0006270||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052630.2"; locus_tag "C7A06_RS33590"; product "RepB family plasmid replication initiator protein"; protein_id "WP_000361610.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
186 NZ_CP027601.1 RefSeq gene 35141 35347 . + . gene_id "nbis-gene-5676"; ID "nbis-gene-5676"; Name "C7A06_RS33595"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33595";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
187 NZ_CP027601.1 RefSeq transcript 35141 35347 . + . gene_id "nbis-gene-5676"; transcript_id "gene-C7A06_RS33595"; ID "gene-C7A06_RS33595"; Name "C7A06_RS33595"; Parent "nbis-gene-5676"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33595"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
188 NZ_CP027601.1 Protein Homology exon 35141 35347 . + . gene_id "nbis-gene-5676"; transcript_id "gene-C7A06_RS33595"; Dbxref "Genbank:WP_012917682.1"; ID "nbis-exon-5938"; Name "WP_012917682.1"; Parent "gene-C7A06_RS33595"; gbkey "CDS"; inference "COORDINATES: protein motif:HMM:NF013677.2"; locus_tag "C7A06_RS33595"; product "transposase"; protein_id "WP_012917682.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
189 NZ_CP027601.1 Protein Homology CDS 35141 35347 . + 0 gene_id "nbis-gene-5676"; transcript_id "gene-C7A06_RS33595"; Dbxref "Genbank:WP_012917682.1"; ID "cds-WP_012917682.1"; Name "WP_012917682.1"; Parent "gene-C7A06_RS33595"; gbkey "CDS"; inference "COORDINATES: protein motif:HMM:NF013677.2"; locus_tag "C7A06_RS33595"; product "transposase"; protein_id "WP_012917682.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
190 NZ_CP027601.1 RefSeq gene 35401 36075 . + . gene_id "nbis-gene-5677"; ID "nbis-gene-5677"; Name "tnpA"; gbkey "Gene"; gene "tnpA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33600";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
191 NZ_CP027601.1 RefSeq transcript 35401 36075 . + . gene_id "nbis-gene-5677"; transcript_id "gene-C7A06_RS33600"; ID "gene-C7A06_RS33600"; Name "tnpA"; Parent "nbis-gene-5677"; gbkey "Gene"; gene "tnpA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33600"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
192 NZ_CP027601.1 Protein Homology exon 35401 36075 . + . gene_id "nbis-gene-5677"; transcript_id "gene-C7A06_RS33600"; Dbxref "Genbank:WP_001341423.1"; ID "nbis-exon-5939"; Name "WP_001341423.1"; Ontology_term "GO:0006313" "GO:0003677" "GO:0004803"; Parent "gene-C7A06_RS33600"; gbkey "CDS"; gene "tnpA"; go_function "DNA binding|0003677||IEA" "transposase activity|0004803||IEA"; go_process "transposition, DNA-mediated|0006313||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_311873.1"; locus_tag "C7A06_RS33600"; product "IS66-like element accessory protein TnpA"; protein_id "WP_001341423.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
193 NZ_CP027601.1 Protein Homology CDS 35401 36075 . + 0 gene_id "nbis-gene-5677"; transcript_id "gene-C7A06_RS33600"; Dbxref "Genbank:WP_001341423.1"; ID "cds-WP_001341423.1-2"; Name "WP_001341423.1"; Ontology_term "GO:0006313" "GO:0003677" "GO:0004803"; Parent "gene-C7A06_RS33600"; gbkey "CDS"; gene "tnpA"; go_function "DNA binding|0003677||IEA" "transposase activity|0004803||IEA"; go_process "transposition, DNA-mediated|0006313||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_311873.1"; locus_tag "C7A06_RS33600"; product "IS66-like element accessory protein TnpA"; protein_id "WP_001341423.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
194 NZ_CP027601.1 RefSeq gene 36072 36419 . + . gene_id "nbis-gene-5678"; ID "nbis-gene-5678"; Name "tnpB"; gbkey "Gene"; gene "tnpB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33605";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
195 NZ_CP027601.1 RefSeq transcript 36072 36419 . + . gene_id "nbis-gene-5678"; transcript_id "gene-C7A06_RS33605"; ID "gene-C7A06_RS33605"; Name "tnpB"; Parent "nbis-gene-5678"; gbkey "Gene"; gene "tnpB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33605"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
196 NZ_CP027601.1 Protein Homology exon 36072 36419 . + . gene_id "nbis-gene-5678"; transcript_id "gene-C7A06_RS33605"; Dbxref "Genbank:WP_000631725.1"; ID "nbis-exon-5940"; Name "WP_000631725.1"; Note "TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase."; Parent "gene-C7A06_RS33605"; gbkey "CDS"; gene "tnpB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_858152.1"; locus_tag "C7A06_RS33605"; product "IS66 family insertion sequence element accessory protein TnpB"; protein_id "WP_000631725.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
197 NZ_CP027601.1 Protein Homology CDS 36072 36419 . + 0 gene_id "nbis-gene-5678"; transcript_id "gene-C7A06_RS33605"; Dbxref "Genbank:WP_000631725.1"; ID "cds-WP_000631725.1-2"; Name "WP_000631725.1"; Note "TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase."; Parent "gene-C7A06_RS33605"; gbkey "CDS"; gene "tnpB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_858152.1"; locus_tag "C7A06_RS33605"; product "IS66 family insertion sequence element accessory protein TnpB"; protein_id "WP_000631725.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
198 NZ_CP027601.1 RefSeq gene 36439 37991 . + . gene_id "nbis-pseudogene-262"; ID "nbis-pseudogene-262"; Name "C7A06_RS33610"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33610"; original_biotype "pseudogene"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
199 NZ_CP027601.1 RefSeq transcript 36439 37991 . + . gene_id "nbis-pseudogene-262"; transcript_id "gene-C7A06_RS33610"; ID "gene-C7A06_RS33610"; Name "C7A06_RS33610"; Parent "nbis-pseudogene-262"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33610"; original_biotype "mrna"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
200 NZ_CP027601.1 Protein Homology exon 36439 37991 . + . gene_id "nbis-pseudogene-262"; transcript_id "gene-C7A06_RS33610"; ID "nbis-exon-5941"; Note "frameshifted"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33610"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001066419.1"; locus_tag "C7A06_RS33610"; product "IS66 family transposase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
201 NZ_CP027601.1 Protein Homology CDS 36439 37991 . + 0 gene_id "nbis-pseudogene-262"; transcript_id "gene-C7A06_RS33610"; ID "cds-C7A06_RS33610"; Note "frameshifted"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33610"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001066419.1"; locus_tag "C7A06_RS33610"; product "IS66 family transposase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
202 NZ_CP027601.1 RefSeq gene 38025 38414 . + . gene_id "nbis-pseudogene-263"; ID "nbis-pseudogene-263"; Name "C7A06_RS33615"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33615"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "38025";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
203 NZ_CP027601.1 RefSeq transcript 38025 38414 . + . gene_id "nbis-pseudogene-263"; transcript_id "gene-C7A06_RS33615"; ID "gene-C7A06_RS33615"; Name "C7A06_RS33615"; Parent "nbis-pseudogene-263"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33615"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "38025";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
204 NZ_CP027601.1 Protein Homology exon 38025 38414 . + . gene_id "nbis-pseudogene-263"; transcript_id "gene-C7A06_RS33615"; ID "nbis-exon-5942"; Note "incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS33615"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052628.1"; locus_tag "C7A06_RS33615"; partial "true"; product "site-specific integrase"; pseudo "true"; start_range "." "38025"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
205 NZ_CP027601.1 Protein Homology CDS 38025 38414 . + 0 gene_id "nbis-pseudogene-263"; transcript_id "gene-C7A06_RS33615"; ID "cds-C7A06_RS33615"; Note "incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS33615"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052628.1"; locus_tag "C7A06_RS33615"; partial "true"; product "site-specific integrase"; pseudo "true"; start_range "." "38025"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
206 NZ_CP027601.1 RefSeq gene 38815 39180 . + . gene_id "nbis-gene-5679"; ID "nbis-gene-5679"; Name "C7A06_RS33625"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33625";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
207 NZ_CP027601.1 RefSeq transcript 38815 39180 . + . gene_id "nbis-gene-5679"; transcript_id "gene-C7A06_RS33625"; ID "gene-C7A06_RS33625"; Name "C7A06_RS33625"; Parent "nbis-gene-5679"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33625"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
208 NZ_CP027601.1 GeneMarkS-2+ exon 38815 39180 . + . gene_id "nbis-gene-5679"; transcript_id "gene-C7A06_RS33625"; Dbxref "Genbank:WP_000091308.1"; ID "nbis-exon-5943"; Name "WP_000091308.1"; Parent "gene-C7A06_RS33625"; gbkey "CDS"; inference "COORDINATES: ab initio prediction:GeneMarkS-2+"; locus_tag "C7A06_RS33625"; product "hypothetical protein"; protein_id "WP_000091308.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
209 NZ_CP027601.1 GeneMarkS-2+ CDS 38815 39180 . + 0 gene_id "nbis-gene-5679"; transcript_id "gene-C7A06_RS33625"; Dbxref "Genbank:WP_000091308.1"; ID "cds-WP_000091308.1"; Name "WP_000091308.1"; Parent "gene-C7A06_RS33625"; gbkey "CDS"; inference "COORDINATES: ab initio prediction:GeneMarkS-2+"; locus_tag "C7A06_RS33625"; product "hypothetical protein"; protein_id "WP_000091308.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
210 NZ_CP027601.1 RefSeq gene 39180 40367 . + . gene_id "nbis-gene-5680"; ID "nbis-gene-5680"; Name "C7A06_RS33630"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33630";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
211 NZ_CP027601.1 RefSeq transcript 39180 40367 . + . gene_id "nbis-gene-5680"; transcript_id "gene-C7A06_RS33630"; ID "gene-C7A06_RS33630"; Name "C7A06_RS33630"; Parent "nbis-gene-5680"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33630"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
212 NZ_CP027601.1 Protein Homology exon 39180 40367 . + . gene_id "nbis-gene-5680"; transcript_id "gene-C7A06_RS33630"; Dbxref "Genbank:WP_000937603.1"; ID "nbis-exon-5944"; Name "WP_000937603.1"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33630"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_013747467.1"; locus_tag "C7A06_RS33630"; product "IS91 family transposase"; protein_id "WP_000937603.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
213 NZ_CP027601.1 Protein Homology CDS 39180 40367 . + 0 gene_id "nbis-gene-5680"; transcript_id "gene-C7A06_RS33630"; Dbxref "Genbank:WP_000937603.1"; ID "cds-WP_000937603.1"; Name "WP_000937603.1"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33630"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_013747467.1"; locus_tag "C7A06_RS33630"; product "IS91 family transposase"; protein_id "WP_000937603.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
214 NZ_CP027601.1 RefSeq gene 40646 42198 . - . gene_id "nbis-pseudogene-264"; ID "nbis-pseudogene-264"; Name "C7A06_RS33635"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33635"; original_biotype "pseudogene"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
215 NZ_CP027601.1 RefSeq transcript 40646 42198 . - . gene_id "nbis-pseudogene-264"; transcript_id "gene-C7A06_RS33635"; ID "gene-C7A06_RS33635"; Name "C7A06_RS33635"; Parent "nbis-pseudogene-264"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33635"; original_biotype "mrna"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
216 NZ_CP027601.1 Protein Homology exon 40646 42198 . - . gene_id "nbis-pseudogene-264"; transcript_id "gene-C7A06_RS33635"; ID "nbis-exon-5945"; Note "frameshifted"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33635"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001066419.1"; locus_tag "C7A06_RS33635"; product "IS66 family transposase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
217 NZ_CP027601.1 Protein Homology CDS 40646 42198 . - 0 gene_id "nbis-pseudogene-264"; transcript_id "gene-C7A06_RS33635"; ID "cds-C7A06_RS33635"; Note "frameshifted"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33635"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001066419.1"; locus_tag "C7A06_RS33635"; product "IS66 family transposase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
218 NZ_CP027601.1 RefSeq gene 42218 42565 . - . gene_id "nbis-gene-5681"; ID "nbis-gene-5681"; Name "tnpB"; gbkey "Gene"; gene "tnpB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33640";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
219 NZ_CP027601.1 RefSeq transcript 42218 42565 . - . gene_id "nbis-gene-5681"; transcript_id "gene-C7A06_RS33640"; ID "gene-C7A06_RS33640"; Name "tnpB"; Parent "nbis-gene-5681"; gbkey "Gene"; gene "tnpB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33640"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
220 NZ_CP027601.1 Protein Homology exon 42218 42565 . - . gene_id "nbis-gene-5681"; transcript_id "gene-C7A06_RS33640"; Dbxref "Genbank:WP_000631725.1"; ID "nbis-exon-5946"; Name "WP_000631725.1"; Note "TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase."; Parent "gene-C7A06_RS33640"; gbkey "CDS"; gene "tnpB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_858152.1"; locus_tag "C7A06_RS33640"; product "IS66 family insertion sequence element accessory protein TnpB"; protein_id "WP_000631725.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
221 NZ_CP027601.1 Protein Homology CDS 42218 42565 . - 0 gene_id "nbis-gene-5681"; transcript_id "gene-C7A06_RS33640"; Dbxref "Genbank:WP_000631725.1"; ID "cds-WP_000631725.1-3"; Name "WP_000631725.1"; Note "TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase."; Parent "gene-C7A06_RS33640"; gbkey "CDS"; gene "tnpB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_858152.1"; locus_tag "C7A06_RS33640"; product "IS66 family insertion sequence element accessory protein TnpB"; protein_id "WP_000631725.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
222 NZ_CP027601.1 RefSeq gene 42562 43236 . - . gene_id "nbis-gene-5682"; ID "nbis-gene-5682"; Name "tnpA"; gbkey "Gene"; gene "tnpA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33645";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
223 NZ_CP027601.1 RefSeq transcript 42562 43236 . - . gene_id "nbis-gene-5682"; transcript_id "gene-C7A06_RS33645"; ID "gene-C7A06_RS33645"; Name "tnpA"; Parent "nbis-gene-5682"; gbkey "Gene"; gene "tnpA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33645"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
224 NZ_CP027601.1 Protein Homology exon 42562 43236 . - . gene_id "nbis-gene-5682"; transcript_id "gene-C7A06_RS33645"; Dbxref "Genbank:WP_001341423.1"; ID "nbis-exon-5947"; Name "WP_001341423.1"; Ontology_term "GO:0006313" "GO:0003677" "GO:0004803"; Parent "gene-C7A06_RS33645"; gbkey "CDS"; gene "tnpA"; go_function "DNA binding|0003677||IEA" "transposase activity|0004803||IEA"; go_process "transposition, DNA-mediated|0006313||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_311873.1"; locus_tag "C7A06_RS33645"; product "IS66-like element accessory protein TnpA"; protein_id "WP_001341423.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
225 NZ_CP027601.1 Protein Homology CDS 42562 43236 . - 0 gene_id "nbis-gene-5682"; transcript_id "gene-C7A06_RS33645"; Dbxref "Genbank:WP_001341423.1"; ID "cds-WP_001341423.1-3"; Name "WP_001341423.1"; Ontology_term "GO:0006313" "GO:0003677" "GO:0004803"; Parent "gene-C7A06_RS33645"; gbkey "CDS"; gene "tnpA"; go_function "DNA binding|0003677||IEA" "transposase activity|0004803||IEA"; go_process "transposition, DNA-mediated|0006313||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_311873.1"; locus_tag "C7A06_RS33645"; product "IS66-like element accessory protein TnpA"; protein_id "WP_001341423.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
226 NZ_CP027601.1 RefSeq gene 43320 43676 . - . gene_id "nbis-pseudogene-265"; ID "nbis-pseudogene-265"; Name "C7A06_RS33650"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33650"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "43320";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
227 NZ_CP027601.1 RefSeq transcript 43320 43676 . - . gene_id "nbis-pseudogene-265"; transcript_id "gene-C7A06_RS33650"; ID "gene-C7A06_RS33650"; Name "C7A06_RS33650"; Parent "nbis-pseudogene-265"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33650"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "43320";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
228 NZ_CP027601.1 Protein Homology exon 43320 43676 . - . gene_id "nbis-pseudogene-265"; transcript_id "gene-C7A06_RS33650"; ID "nbis-exon-5948"; Note "incomplete; partial in the middle of a contig; missing C-terminus"; Ontology_term "GO:0006310" "GO:0015074" "GO:0003677"; Parent "gene-C7A06_RS33650"; gbkey "CDS"; go_function "DNA binding|0003677||IEA"; go_process "DNA recombination|0006310||IEA" "DNA integration|0015074||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052628.1"; locus_tag "C7A06_RS33650"; partial "true"; product "tyrosine-type recombinase/integrase"; pseudo "true"; start_range "." "43320"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
229 NZ_CP027601.1 Protein Homology CDS 43320 43676 . - 0 gene_id "nbis-pseudogene-265"; transcript_id "gene-C7A06_RS33650"; ID "cds-C7A06_RS33650"; Note "incomplete; partial in the middle of a contig; missing C-terminus"; Ontology_term "GO:0006310" "GO:0015074" "GO:0003677"; Parent "gene-C7A06_RS33650"; gbkey "CDS"; go_function "DNA binding|0003677||IEA"; go_process "DNA recombination|0006310||IEA" "DNA integration|0015074||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052628.1"; locus_tag "C7A06_RS33650"; partial "true"; product "tyrosine-type recombinase/integrase"; pseudo "true"; start_range "." "43320"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
230 NZ_CP027601.1 RefSeq gene 43804 44664 . + . gene_id "nbis-gene-5683"; ID "nbis-gene-5683"; Name "C7A06_RS33655"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33655";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
231 NZ_CP027601.1 RefSeq transcript 43804 44664 . + . gene_id "nbis-gene-5683"; transcript_id "gene-C7A06_RS33655"; ID "gene-C7A06_RS33655"; Name "C7A06_RS33655"; Parent "nbis-gene-5683"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33655"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
232 NZ_CP027601.1 Protein Homology exon 43804 44664 . + . gene_id "nbis-gene-5683"; transcript_id "gene-C7A06_RS33655"; Dbxref "Genbank:WP_000704534.1"; ID "nbis-exon-5949"; Name "WP_000704534.1"; Parent "gene-C7A06_RS33655"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052670.1"; locus_tag "C7A06_RS33655"; product "alpha/beta hydrolase"; protein_id "WP_000704534.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
233 NZ_CP027601.1 Protein Homology CDS 43804 44664 . + 0 gene_id "nbis-gene-5683"; transcript_id "gene-C7A06_RS33655"; Dbxref "Genbank:WP_000704534.1"; ID "cds-WP_000704534.1"; Name "WP_000704534.1"; Parent "gene-C7A06_RS33655"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052670.1"; locus_tag "C7A06_RS33655"; product "alpha/beta hydrolase"; protein_id "WP_000704534.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
234 NZ_CP027601.1 RefSeq gene 45279 45428 . + . gene_id "nbis-gene-5806"; ID "nbis-gene-5806"; Name "C7A06_RS34665"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS34665";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
235 NZ_CP027601.1 RefSeq transcript 45279 45428 . + . gene_id "nbis-gene-5806"; transcript_id "gene-C7A06_RS34665"; ID "gene-C7A06_RS34665"; Name "C7A06_RS34665"; Parent "nbis-gene-5806"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS34665"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
236 NZ_CP027601.1 GeneMarkS-2+ exon 45279 45428 . + . gene_id "nbis-gene-5806"; transcript_id "gene-C7A06_RS34665"; Dbxref "Genbank:WP_000955366.1"; ID "nbis-exon-6115"; Name "WP_000955366.1"; Parent "gene-C7A06_RS34665"; gbkey "CDS"; inference "COORDINATES: ab initio prediction:GeneMarkS-2+"; locus_tag "C7A06_RS34665"; product "hypothetical protein"; protein_id "WP_000955366.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
237 NZ_CP027601.1 GeneMarkS-2+ CDS 45279 45428 . + 0 gene_id "nbis-gene-5806"; transcript_id "gene-C7A06_RS34665"; Dbxref "Genbank:WP_000955366.1"; ID "cds-WP_000955366.1"; Name "WP_000955366.1"; Parent "gene-C7A06_RS34665"; gbkey "CDS"; inference "COORDINATES: ab initio prediction:GeneMarkS-2+"; locus_tag "C7A06_RS34665"; product "hypothetical protein"; protein_id "WP_000955366.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
238 NZ_CP027601.1 RefSeq gene 45469 46625 . - . gene_id "nbis-gene-5684"; ID "nbis-gene-5684"; Name "C7A06_RS33660"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33660";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
239 NZ_CP027601.1 RefSeq transcript 45469 46625 . - . gene_id "nbis-gene-5684"; transcript_id "gene-C7A06_RS33660"; ID "gene-C7A06_RS33660"; Name "C7A06_RS33660"; Parent "nbis-gene-5684"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33660"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
240 NZ_CP027601.1 Protein Homology exon 45469 46625 . - . gene_id "nbis-gene-5684"; transcript_id "gene-C7A06_RS33660"; Dbxref "Genbank:WP_085948186.1"; ID "nbis-exon-5950"; Name "WP_085948186.1"; Note "programmed frameshift"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33660"; exception "ribosomal slippage"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1"; locus_tag "C7A06_RS33660"; product "IS3 family transposase"; protein_id "WP_085948186.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
241 NZ_CP027601.1 Protein Homology CDS 45469 46625 . - 2 gene_id "nbis-gene-5684"; transcript_id "gene-C7A06_RS33660"; Dbxref "Genbank:WP_085948186.1"; ID "cds-WP_085948186.1-12"; Name "WP_085948186.1"; Note "programmed frameshift"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33660"; exception "ribosomal slippage"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1"; locus_tag "C7A06_RS33660"; product "IS3 family transposase"; protein_id "WP_085948186.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
242 NZ_CP027601.1 RefSeq gene 46693 47238 . + . gene_id "nbis-gene-5685"; ID "nbis-gene-5685"; Name "C7A06_RS33665"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33665";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
243 NZ_CP027601.1 RefSeq transcript 46693 47238 . + . gene_id "nbis-gene-5685"; transcript_id "gene-C7A06_RS33665"; ID "gene-C7A06_RS33665"; Name "C7A06_RS33665"; Parent "nbis-gene-5685"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33665"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
244 NZ_CP027601.1 Protein Homology exon 46693 47238 . + . gene_id "nbis-gene-5685"; transcript_id "gene-C7A06_RS33665"; Dbxref "Genbank:WP_001165114.1"; ID "nbis-exon-5951"; Name "WP_001165114.1"; Parent "gene-C7A06_RS33665"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001165114.1"; locus_tag "C7A06_RS33665"; product "hypothetical protein"; protein_id "WP_001165114.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
245 NZ_CP027601.1 Protein Homology CDS 46693 47238 . + 0 gene_id "nbis-gene-5685"; transcript_id "gene-C7A06_RS33665"; Dbxref "Genbank:WP_001165114.1"; ID "cds-WP_001165114.1"; Name "WP_001165114.1"; Parent "gene-C7A06_RS33665"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001165114.1"; locus_tag "C7A06_RS33665"; product "hypothetical protein"; protein_id "WP_001165114.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
246 NZ_CP027601.1 RefSeq gene 47400 47816 . - . gene_id "nbis-gene-5686"; ID "nbis-gene-5686"; Name "C7A06_RS33670"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33670";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
247 NZ_CP027601.1 RefSeq transcript 47400 47816 . - . gene_id "nbis-gene-5686"; transcript_id "gene-C7A06_RS33670"; ID "gene-C7A06_RS33670"; Name "C7A06_RS33670"; Parent "nbis-gene-5686"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33670"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
248 NZ_CP027601.1 Protein Homology exon 47400 47816 . - . gene_id "nbis-gene-5686"; transcript_id "gene-C7A06_RS33670"; Dbxref "Genbank:WP_001044768.1"; ID "nbis-exon-5952"; Name "WP_001044768.1"; Parent "gene-C7A06_RS33670"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_005229630.1"; locus_tag "C7A06_RS33670"; product "type II toxin-antitoxin system VapC family toxin"; protein_id "WP_001044768.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
249 NZ_CP027601.1 Protein Homology CDS 47400 47816 . - 0 gene_id "nbis-gene-5686"; transcript_id "gene-C7A06_RS33670"; Dbxref "Genbank:WP_001044768.1"; ID "cds-WP_001044768.1"; Name "WP_001044768.1"; Parent "gene-C7A06_RS33670"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_005229630.1"; locus_tag "C7A06_RS33670"; product "type II toxin-antitoxin system VapC family toxin"; protein_id "WP_001044768.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
250 NZ_CP027601.1 RefSeq gene 47813 48043 . - . gene_id "nbis-gene-5687"; ID "nbis-gene-5687"; Name "vapB"; gbkey "Gene"; gene "vapB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33675";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
251 NZ_CP027601.1 RefSeq transcript 47813 48043 . - . gene_id "nbis-gene-5687"; transcript_id "gene-C7A06_RS33675"; ID "gene-C7A06_RS33675"; Name "vapB"; Parent "nbis-gene-5687"; gbkey "Gene"; gene "vapB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33675"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
252 NZ_CP027601.1 Protein Homology exon 47813 48043 . - . gene_id "nbis-gene-5687"; transcript_id "gene-C7A06_RS33675"; Dbxref "Genbank:WP_001261287.1"; ID "nbis-exon-5953"; Name "WP_001261287.1"; Parent "gene-C7A06_RS33675"; gbkey "CDS"; gene "vapB"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_005229629.1"; locus_tag "C7A06_RS33675"; product "type II toxin-antitoxin system VapB family antitoxin"; protein_id "WP_001261287.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
253 NZ_CP027601.1 Protein Homology CDS 47813 48043 . - 0 gene_id "nbis-gene-5687"; transcript_id "gene-C7A06_RS33675"; Dbxref "Genbank:WP_001261287.1"; ID "cds-WP_001261287.1"; Name "WP_001261287.1"; Parent "gene-C7A06_RS33675"; gbkey "CDS"; gene "vapB"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_005229629.1"; locus_tag "C7A06_RS33675"; product "type II toxin-antitoxin system VapB family antitoxin"; protein_id "WP_001261287.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
254 NZ_CP027601.1 RefSeq gene 48603 49016 . + . gene_id "nbis-gene-5688"; ID "nbis-gene-5688"; Name "C7A06_RS33695"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33695";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
255 NZ_CP027601.1 RefSeq transcript 48603 49016 . + . gene_id "nbis-gene-5688"; transcript_id "gene-C7A06_RS33695"; ID "gene-C7A06_RS33695"; Name "C7A06_RS33695"; Parent "nbis-gene-5688"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33695"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
256 NZ_CP027601.1 Protein Homology exon 48603 49016 . + . gene_id "nbis-gene-5688"; transcript_id "gene-C7A06_RS33695"; Dbxref "Genbank:WP_000465041.1"; ID "nbis-exon-5954"; Name "WP_000465041.1"; Parent "gene-C7A06_RS33695"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001536595.1"; locus_tag "C7A06_RS33695"; product "hypothetical protein"; protein_id "WP_000465041.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
257 NZ_CP027601.1 Protein Homology CDS 48603 49016 . + 0 gene_id "nbis-gene-5688"; transcript_id "gene-C7A06_RS33695"; Dbxref "Genbank:WP_000465041.1"; ID "cds-WP_000465041.1"; Name "WP_000465041.1"; Parent "gene-C7A06_RS33695"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001536595.1"; locus_tag "C7A06_RS33695"; product "hypothetical protein"; protein_id "WP_000465041.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
258 NZ_CP027601.1 RefSeq gene 49018 49800 . + . gene_id "nbis-gene-5689"; ID "nbis-gene-5689"; Name "C7A06_RS33700"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33700";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
259 NZ_CP027601.1 RefSeq transcript 49018 49800 . + . gene_id "nbis-gene-5689"; transcript_id "gene-C7A06_RS33700"; ID "gene-C7A06_RS33700"; Name "C7A06_RS33700"; Parent "nbis-gene-5689"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33700"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
260 NZ_CP027601.1 Protein Homology exon 49018 49800 . + . gene_id "nbis-gene-5689"; transcript_id "gene-C7A06_RS33700"; Dbxref "Genbank:WP_001164205.1"; ID "nbis-exon-5955"; Name "WP_001164205.1"; Parent "gene-C7A06_RS33700"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001164193.1"; locus_tag "C7A06_RS33700"; product "site-specific integrase"; protein_id "WP_001164205.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
261 NZ_CP027601.1 Protein Homology CDS 49018 49800 . + 0 gene_id "nbis-gene-5689"; transcript_id "gene-C7A06_RS33700"; Dbxref "Genbank:WP_001164205.1"; ID "cds-WP_001164205.1"; Name "WP_001164205.1"; Parent "gene-C7A06_RS33700"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001164193.1"; locus_tag "C7A06_RS33700"; product "site-specific integrase"; protein_id "WP_001164205.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
262 NZ_CP027601.1 RefSeq gene 49972 50325 . + . gene_id "nbis-gene-5690"; ID "nbis-gene-5690"; Name "cmi"; gbkey "Gene"; gene "cmi"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33705";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
263 NZ_CP027601.1 RefSeq transcript 49972 50325 . + . gene_id "nbis-gene-5690"; transcript_id "gene-C7A06_RS33705"; ID "gene-C7A06_RS33705"; Name "cmi"; Parent "nbis-gene-5690"; gbkey "Gene"; gene "cmi"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33705"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
264 NZ_CP027601.1 Protein Homology exon 49972 50325 . + . gene_id "nbis-gene-5690"; transcript_id "gene-C7A06_RS33705"; Dbxref "Genbank:WP_000864810.1"; ID "nbis-exon-5956"; Name "WP_000864810.1"; Parent "gene-C7A06_RS33705"; gbkey "CDS"; gene "cmi"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_104216667.1"; locus_tag "C7A06_RS33705"; product "colicin M immunity protein"; protein_id "WP_000864810.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
265 NZ_CP027601.1 Protein Homology CDS 49972 50325 . + 0 gene_id "nbis-gene-5690"; transcript_id "gene-C7A06_RS33705"; Dbxref "Genbank:WP_000864810.1"; ID "cds-WP_000864810.1"; Name "WP_000864810.1"; Parent "gene-C7A06_RS33705"; gbkey "CDS"; gene "cmi"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_104216667.1"; locus_tag "C7A06_RS33705"; product "colicin M immunity protein"; protein_id "WP_000864810.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
266 NZ_CP027601.1 RefSeq gene 50333 50524 . - . gene_id "nbis-pseudogene-266"; ID "nbis-pseudogene-266"; Name "C7A06_RS33710"; end_range "50524" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33710"; original_biotype "pseudogene"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
267 NZ_CP027601.1 RefSeq transcript 50333 50524 . - . gene_id "nbis-pseudogene-266"; transcript_id "gene-C7A06_RS33710"; ID "gene-C7A06_RS33710"; Name "C7A06_RS33710"; Parent "nbis-pseudogene-266"; end_range "50524" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33710"; original_biotype "mrna"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
268 NZ_CP027601.1 Protein Homology exon 50333 50524 . - . gene_id "nbis-pseudogene-266"; transcript_id "gene-C7A06_RS33710"; ID "nbis-exon-5957"; Note "incomplete; partial in the middle of a contig; missing N-terminus"; Ontology_term "GO:0042742"; Parent "gene-C7A06_RS33710"; end_range "50524" "."; gbkey "CDS"; go_process "defense response to bacterium|0042742||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000449473.1"; locus_tag "C7A06_RS33710"; partial "true"; product "lipid II-degrading bacteriocin"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
269 NZ_CP027601.1 Protein Homology CDS 50333 50524 . - 0 gene_id "nbis-pseudogene-266"; transcript_id "gene-C7A06_RS33710"; ID "cds-C7A06_RS33710"; Note "incomplete; partial in the middle of a contig; missing N-terminus"; Ontology_term "GO:0042742"; Parent "gene-C7A06_RS33710"; end_range "50524" "."; gbkey "CDS"; go_process "defense response to bacterium|0042742||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000449473.1"; locus_tag "C7A06_RS33710"; partial "true"; product "lipid II-degrading bacteriocin"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
270 NZ_CP027601.1 RefSeq gene 50528 50671 . - . gene_id "nbis-pseudogene-267"; ID "nbis-pseudogene-267"; Name "C7A06_RS33715"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33715"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "50528";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
271 NZ_CP027601.1 RefSeq transcript 50528 50671 . - . gene_id "nbis-pseudogene-267"; transcript_id "gene-C7A06_RS33715"; ID "gene-C7A06_RS33715"; Name "C7A06_RS33715"; Parent "nbis-pseudogene-267"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33715"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "50528";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
272 NZ_CP027601.1 Protein Homology exon 50528 50671 . - . gene_id "nbis-pseudogene-267"; transcript_id "gene-C7A06_RS33715"; ID "nbis-exon-5958"; Note "incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS33715"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_958720.1"; locus_tag "C7A06_RS33715"; partial "true"; product "transcriptional regulator"; pseudo "true"; start_range "." "50528"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
273 NZ_CP027601.1 Protein Homology CDS 50528 50671 . - 0 gene_id "nbis-pseudogene-267"; transcript_id "gene-C7A06_RS33715"; ID "cds-C7A06_RS33715"; Note "incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS33715"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_958720.1"; locus_tag "C7A06_RS33715"; partial "true"; product "transcriptional regulator"; pseudo "true"; start_range "." "50528"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
274 NZ_CP027601.1 RefSeq gene 50738 52176 . - . gene_id "nbis-pseudogene-268"; ID "nbis-pseudogene-268"; Name "ehxD"; gbkey "Gene"; gene "ehxD"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33720"; original_biotype "pseudogene"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
275 NZ_CP027601.1 RefSeq transcript 50738 52176 . - . gene_id "nbis-pseudogene-268"; transcript_id "gene-C7A06_RS33720"; ID "gene-C7A06_RS33720"; Name "ehxD"; Parent "nbis-pseudogene-268"; gbkey "Gene"; gene "ehxD"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33720"; original_biotype "mrna"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
276 NZ_CP027601.1 Protein Homology exon 50738 52176 . - . gene_id "nbis-pseudogene-268"; transcript_id "gene-C7A06_RS33720"; ID "nbis-exon-5959"; Note "frameshifted"; Parent "gene-C7A06_RS33720"; gbkey "CDS"; gene "ehxD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052626.1"; locus_tag "C7A06_RS33720"; product "enterohemolysin T1SS ABC transporter subunit EhxD"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
277 NZ_CP027601.1 Protein Homology CDS 50738 52176 . - 0 gene_id "nbis-pseudogene-268"; transcript_id "gene-C7A06_RS33720"; ID "cds-C7A06_RS33720"; Note "frameshifted"; Parent "gene-C7A06_RS33720"; gbkey "CDS"; gene "ehxD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052626.1"; locus_tag "C7A06_RS33720"; product "enterohemolysin T1SS ABC transporter subunit EhxD"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
278 NZ_CP027601.1 RefSeq gene 52180 54300 . - . gene_id "nbis-gene-5691"; ID "nbis-gene-5691"; Name "ehxB"; gbkey "Gene"; gene "ehxB"; gene_biotype "protein_coding"; gene_synonym "hlyB"; locus_tag "C7A06_RS33725";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
279 NZ_CP027601.1 RefSeq transcript 52180 54300 . - . gene_id "nbis-gene-5691"; transcript_id "gene-C7A06_RS33725"; ID "gene-C7A06_RS33725"; Name "ehxB"; Parent "nbis-gene-5691"; gbkey "Gene"; gene "ehxB"; gene_biotype "protein_coding"; gene_synonym "hlyB"; locus_tag "C7A06_RS33725"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
280 NZ_CP027601.1 Protein Homology exon 52180 54300 . - . gene_id "nbis-gene-5691"; transcript_id "gene-C7A06_RS33725"; Dbxref "Genbank:WP_000987096.1"; ID "nbis-exon-5960"; Name "WP_000987096.1"; Parent "gene-C7A06_RS33725"; gbkey "CDS"; gene "ehxB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052625.1"; locus_tag "C7A06_RS33725"; product "enterohemolysin T1SS ABC transporter permease/ATPase EhxB"; protein_id "WP_000987096.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
281 NZ_CP027601.1 Protein Homology CDS 52180 54300 . - 0 gene_id "nbis-gene-5691"; transcript_id "gene-C7A06_RS33725"; Dbxref "Genbank:WP_000987096.1"; ID "cds-WP_000987096.1"; Name "WP_000987096.1"; Parent "gene-C7A06_RS33725"; gbkey "CDS"; gene "ehxB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052625.1"; locus_tag "C7A06_RS33725"; product "enterohemolysin T1SS ABC transporter permease/ATPase EhxB"; protein_id "WP_000987096.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
282 NZ_CP027601.1 RefSeq gene 54350 57346 . - . gene_id "nbis-gene-5692"; ID "nbis-gene-5692"; Name "ehxA"; gbkey "Gene"; gene "ehxA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33730";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
283 NZ_CP027601.1 RefSeq transcript 54350 57346 . - . gene_id "nbis-gene-5692"; transcript_id "gene-C7A06_RS33730"; ID "gene-C7A06_RS33730"; Name "ehxA"; Parent "nbis-gene-5692"; gbkey "Gene"; gene "ehxA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33730"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
284 NZ_CP027601.1 Protein Homology exon 54350 57346 . - . gene_id "nbis-gene-5692"; transcript_id "gene-C7A06_RS33730"; Dbxref "Genbank:WP_000217745.1"; ID "nbis-exon-5961"; Name "WP_000217745.1"; Parent "gene-C7A06_RS33730"; gbkey "CDS"; gene "ehxA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052624.1"; locus_tag "C7A06_RS33730"; product "enterohemolysin EhxA"; protein_id "WP_000217745.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
285 NZ_CP027601.1 Protein Homology CDS 54350 57346 . - 0 gene_id "nbis-gene-5692"; transcript_id "gene-C7A06_RS33730"; Dbxref "Genbank:WP_000217745.1"; ID "cds-WP_000217745.1"; Name "WP_000217745.1"; Parent "gene-C7A06_RS33730"; gbkey "CDS"; gene "ehxA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052624.1"; locus_tag "C7A06_RS33730"; product "enterohemolysin EhxA"; protein_id "WP_000217745.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
286 NZ_CP027601.1 RefSeq gene 57348 57862 . - . gene_id "nbis-pseudogene-269"; ID "nbis-pseudogene-269"; Name "ehxC"; gbkey "Gene"; gene "ehxC"; gene_biotype "pseudogene"; gene_synonym "hlyC"; locus_tag "C7A06_RS33735"; original_biotype "pseudogene"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
287 NZ_CP027601.1 RefSeq transcript 57348 57862 . - . gene_id "nbis-pseudogene-269"; transcript_id "gene-C7A06_RS33735"; ID "gene-C7A06_RS33735"; Name "ehxC"; Parent "nbis-pseudogene-269"; gbkey "Gene"; gene "ehxC"; gene_biotype "pseudogene"; gene_synonym "hlyC"; locus_tag "C7A06_RS33735"; original_biotype "mrna"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
288 NZ_CP027601.1 Protein Homology exon 57348 57862 . - . gene_id "nbis-pseudogene-269"; transcript_id "gene-C7A06_RS33735"; ID "nbis-exon-5962"; Note "frameshifted"; Parent "gene-C7A06_RS33735"; gbkey "CDS"; gene "ehxC"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000839950.1"; locus_tag "C7A06_RS33735"; product "enterohemolysin-activating lysine-acyltransferase EhxC"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
289 NZ_CP027601.1 Protein Homology CDS 57348 57862 . - 0 gene_id "nbis-pseudogene-269"; transcript_id "gene-C7A06_RS33735"; ID "cds-C7A06_RS33735"; Note "frameshifted"; Parent "gene-C7A06_RS33735"; gbkey "CDS"; gene "ehxC"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000839950.1"; locus_tag "C7A06_RS33735"; product "enterohemolysin-activating lysine-acyltransferase EhxC"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
290 NZ_CP027601.1 RefSeq gene 58385 59037 . - . gene_id "nbis-pseudogene-270"; ID "nbis-pseudogene-270"; Name "C7A06_RS33745"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33745"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "58385";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
291 NZ_CP027601.1 RefSeq transcript 58385 59037 . - . gene_id "nbis-pseudogene-270"; transcript_id "gene-C7A06_RS33745"; ID "gene-C7A06_RS33745"; Name "C7A06_RS33745"; Parent "nbis-pseudogene-270"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33745"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "58385";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
292 NZ_CP027601.1 Protein Homology exon 58385 59037 . - . gene_id "nbis-pseudogene-270"; transcript_id "gene-C7A06_RS33745"; ID "nbis-exon-5963"; Note "frameshifted; incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS33745"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1"; locus_tag "C7A06_RS33745"; partial "true"; product "IS3 family transposase"; pseudo "true"; start_range "." "58385"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
293 NZ_CP027601.1 Protein Homology CDS 58385 59037 . - 0 gene_id "nbis-pseudogene-270"; transcript_id "gene-C7A06_RS33745"; ID "cds-C7A06_RS33745"; Note "frameshifted; incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS33745"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1"; locus_tag "C7A06_RS33745"; partial "true"; product "IS3 family transposase"; pseudo "true"; start_range "." "58385"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
294 NZ_CP027601.1 RefSeq gene 60511 61332 . + . gene_id "nbis-gene-5693"; ID "nbis-gene-5693"; Name "C7A06_RS33755"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33755";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
295 NZ_CP027601.1 RefSeq transcript 60511 61332 . + . gene_id "nbis-gene-5693"; transcript_id "gene-C7A06_RS33755"; ID "gene-C7A06_RS33755"; Name "C7A06_RS33755"; Parent "nbis-gene-5693"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33755"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
296 NZ_CP027601.1 Protein Homology exon 60511 61332 . + . gene_id "nbis-gene-5693"; transcript_id "gene-C7A06_RS33755"; Dbxref "Genbank:WP_001302199.1"; ID "nbis-exon-5964"; Name "WP_001302199.1"; Parent "gene-C7A06_RS33755"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001302199.1"; locus_tag "C7A06_RS33755"; product "polysaccharide deacetylase family protein"; protein_id "WP_001302199.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
297 NZ_CP027601.1 Protein Homology CDS 60511 61332 . + 0 gene_id "nbis-gene-5693"; transcript_id "gene-C7A06_RS33755"; Dbxref "Genbank:WP_001302199.1"; ID "cds-WP_001302199.1"; Name "WP_001302199.1"; Parent "gene-C7A06_RS33755"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001302199.1"; locus_tag "C7A06_RS33755"; product "polysaccharide deacetylase family protein"; protein_id "WP_001302199.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
298 NZ_CP027601.1 RefSeq gene 61332 62438 . + . gene_id "nbis-gene-5694"; ID "nbis-gene-5694"; Name "C7A06_RS33760"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33760";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
299 NZ_CP027601.1 RefSeq transcript 61332 62438 . + . gene_id "nbis-gene-5694"; transcript_id "gene-C7A06_RS33760"; ID "gene-C7A06_RS33760"; Name "C7A06_RS33760"; Parent "nbis-gene-5694"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33760"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
300 NZ_CP027601.1 Protein Homology exon 61332 62438 . + . gene_id "nbis-gene-5694"; transcript_id "gene-C7A06_RS33760"; Dbxref "Genbank:WP_000975743.1"; ID "nbis-exon-5965"; Name "WP_000975743.1"; Parent "gene-C7A06_RS33760"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052687.1"; locus_tag "C7A06_RS33760"; product "glycosyltransferase family 4 protein"; protein_id "WP_000975743.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
301 NZ_CP027601.1 Protein Homology CDS 61332 62438 . + 0 gene_id "nbis-gene-5694"; transcript_id "gene-C7A06_RS33760"; Dbxref "Genbank:WP_000975743.1"; ID "cds-WP_000975743.1"; Name "WP_000975743.1"; Parent "gene-C7A06_RS33760"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052687.1"; locus_tag "C7A06_RS33760"; product "glycosyltransferase family 4 protein"; protein_id "WP_000975743.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
302 NZ_CP027601.1 RefSeq gene 62532 64253 . + . gene_id "nbis-gene-5695"; ID "nbis-gene-5695"; Name "cptA"; gbkey "Gene"; gene "cptA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33765";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
303 NZ_CP027601.1 RefSeq transcript 62532 64253 . + . gene_id "nbis-gene-5695"; transcript_id "gene-C7A06_RS33765"; ID "gene-C7A06_RS33765"; Name "cptA"; Parent "nbis-gene-5695"; gbkey "Gene"; gene "cptA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33765"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
304 NZ_CP027601.1 Protein Homology exon 62532 64253 . + . gene_id "nbis-gene-5695"; transcript_id "gene-C7A06_RS33765"; Dbxref "Genbank:WP_000550559.1"; ID "nbis-exon-5966"; Name "WP_000550559.1"; Parent "gene-C7A06_RS33765"; gbkey "CDS"; gene "cptA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052688.1"; locus_tag "C7A06_RS33765"; product "phosphoethanolamine transferase CptA"; protein_id "WP_000550559.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
305 NZ_CP027601.1 Protein Homology CDS 62532 64253 . + 0 gene_id "nbis-gene-5695"; transcript_id "gene-C7A06_RS33765"; Dbxref "Genbank:WP_000550559.1"; ID "cds-WP_000550559.1"; Name "WP_000550559.1"; Parent "gene-C7A06_RS33765"; gbkey "CDS"; gene "cptA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052688.1"; locus_tag "C7A06_RS33765"; product "phosphoethanolamine transferase CptA"; protein_id "WP_000550559.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
306 NZ_CP027601.1 RefSeq gene 64327 65325 . + . gene_id "nbis-gene-5696"; ID "nbis-gene-5696"; Name "lpxM"; gbkey "Gene"; gene "lpxM"; gene_biotype "protein_coding"; gene_synonym "msbB"; locus_tag "C7A06_RS33770";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
307 NZ_CP027601.1 RefSeq transcript 64327 65325 . + . gene_id "nbis-gene-5696"; transcript_id "gene-C7A06_RS33770"; ID "gene-C7A06_RS33770"; Name "lpxM"; Parent "nbis-gene-5696"; gbkey "Gene"; gene "lpxM"; gene_biotype "protein_coding"; gene_synonym "msbB"; locus_tag "C7A06_RS33770"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
308 NZ_CP027601.1 Protein Homology exon 64327 65325 . + . gene_id "nbis-gene-5696"; transcript_id "gene-C7A06_RS33770"; Dbxref "Genbank:WP_012680945.1"; ID "nbis-exon-5967"; Name "WP_012680945.1"; Note "LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase, an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species."; Ontology_term "GO:0009245" "GO:0016746"; Parent "gene-C7A06_RS33770"; gbkey "CDS"; gene "lpxM"; go_function "acyltransferase activity|0016746||IEA"; go_process "lipid A biosynthetic process|0009245||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052689.1"; locus_tag "C7A06_RS33770"; product "lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"; protein_id "WP_012680945.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
309 NZ_CP027601.1 Protein Homology CDS 64327 65325 . + 0 gene_id "nbis-gene-5696"; transcript_id "gene-C7A06_RS33770"; Dbxref "Genbank:WP_012680945.1"; ID "cds-WP_012680945.1"; Name "WP_012680945.1"; Note "LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase, an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species."; Ontology_term "GO:0009245" "GO:0016746"; Parent "gene-C7A06_RS33770"; gbkey "CDS"; gene "lpxM"; go_function "acyltransferase activity|0016746||IEA"; go_process "lipid A biosynthetic process|0009245||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_052689.1"; locus_tag "C7A06_RS33770"; product "lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"; protein_id "WP_012680945.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
310 NZ_CP027601.1 RefSeq gene 65378 65566 . + . gene_id "nbis-pseudogene-271"; ID "nbis-pseudogene-271"; Name "C7A06_RS33775"; end_range "65566" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33775"; original_biotype "pseudogene"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
311 NZ_CP027601.1 RefSeq transcript 65378 65566 . + . gene_id "nbis-pseudogene-271"; transcript_id "gene-C7A06_RS33775"; ID "gene-C7A06_RS33775"; Name "C7A06_RS33775"; Parent "nbis-pseudogene-271"; end_range "65566" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33775"; original_biotype "mrna"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
312 NZ_CP027601.1 Protein Homology exon 65378 65566 . + . gene_id "nbis-pseudogene-271"; transcript_id "gene-C7A06_RS33775"; ID "nbis-exon-5968"; Note "internal stop; incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS33775"; end_range "65566" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012767718.1"; locus_tag "C7A06_RS33775"; partial "true"; product "hypothetical protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
313 NZ_CP027601.1 Protein Homology CDS 65378 65566 . + 0 gene_id "nbis-pseudogene-271"; transcript_id "gene-C7A06_RS33775"; ID "cds-C7A06_RS33775"; Note "internal stop; incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS33775"; end_range "65566" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012767718.1"; locus_tag "C7A06_RS33775"; partial "true"; product "hypothetical protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
314 NZ_CP027601.1 RefSeq gene 65629 67167 . - . gene_id "nbis-gene-5697"; ID "nbis-gene-5697"; Name "C7A06_RS33780"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33780";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
315 NZ_CP027601.1 RefSeq transcript 65629 67167 . - . gene_id "nbis-gene-5697"; transcript_id "gene-C7A06_RS33780"; ID "gene-C7A06_RS33780"; Name "C7A06_RS33780"; Parent "nbis-gene-5697"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33780"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
316 NZ_CP027601.1 Protein Homology exon 65629 67167 . - . gene_id "nbis-gene-5697"; transcript_id "gene-C7A06_RS33780"; Dbxref "Genbank:WP_012917688.1"; ID "nbis-exon-5969"; Name "WP_012917688.1"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33780"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1"; locus_tag "C7A06_RS33780"; product "IS66 family transposase"; protein_id "WP_012917688.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
317 NZ_CP027601.1 Protein Homology CDS 65629 67167 . - 0 gene_id "nbis-gene-5697"; transcript_id "gene-C7A06_RS33780"; Dbxref "Genbank:WP_012917688.1"; ID "cds-WP_012917688.1"; Name "WP_012917688.1"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33780"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1"; locus_tag "C7A06_RS33780"; product "IS66 family transposase"; protein_id "WP_012917688.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
318 NZ_CP027601.1 RefSeq gene 67217 67564 . - . gene_id "nbis-gene-5698"; ID "nbis-gene-5698"; Name "tnpB"; gbkey "Gene"; gene "tnpB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33785";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
319 NZ_CP027601.1 RefSeq transcript 67217 67564 . - . gene_id "nbis-gene-5698"; transcript_id "gene-C7A06_RS33785"; ID "gene-C7A06_RS33785"; Name "tnpB"; Parent "nbis-gene-5698"; gbkey "Gene"; gene "tnpB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33785"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
320 NZ_CP027601.1 Protein Homology exon 67217 67564 . - . gene_id "nbis-gene-5698"; transcript_id "gene-C7A06_RS33785"; Dbxref "Genbank:WP_000612591.1"; ID "nbis-exon-5970"; Name "WP_000612591.1"; Note "TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase."; Parent "gene-C7A06_RS33785"; gbkey "CDS"; gene "tnpB"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_019104956.1"; locus_tag "C7A06_RS33785"; product "IS66 family insertion sequence element accessory protein TnpB"; protein_id "WP_000612591.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
321 NZ_CP027601.1 Protein Homology CDS 67217 67564 . - 0 gene_id "nbis-gene-5698"; transcript_id "gene-C7A06_RS33785"; Dbxref "Genbank:WP_000612591.1"; ID "cds-WP_000612591.1-5"; Name "WP_000612591.1"; Note "TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase."; Parent "gene-C7A06_RS33785"; gbkey "CDS"; gene "tnpB"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_019104956.1"; locus_tag "C7A06_RS33785"; product "IS66 family insertion sequence element accessory protein TnpB"; protein_id "WP_000612591.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
322 NZ_CP027601.1 RefSeq gene 67801 68166 . + . gene_id "nbis-gene-5699"; ID "nbis-gene-5699"; Name "C7A06_RS33795"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33795";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
323 NZ_CP027601.1 RefSeq transcript 67801 68166 . + . gene_id "nbis-gene-5699"; transcript_id "gene-C7A06_RS33795"; ID "gene-C7A06_RS33795"; Name "C7A06_RS33795"; Parent "nbis-gene-5699"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33795"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
324 NZ_CP027601.1 GeneMarkS-2+ exon 67801 68166 . + . gene_id "nbis-gene-5699"; transcript_id "gene-C7A06_RS33795"; Dbxref "Genbank:WP_000091308.1"; ID "nbis-exon-5971"; Name "WP_000091308.1"; Parent "gene-C7A06_RS33795"; gbkey "CDS"; inference "COORDINATES: ab initio prediction:GeneMarkS-2+"; locus_tag "C7A06_RS33795"; product "hypothetical protein"; protein_id "WP_000091308.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
325 NZ_CP027601.1 GeneMarkS-2+ CDS 67801 68166 . + 0 gene_id "nbis-gene-5699"; transcript_id "gene-C7A06_RS33795"; Dbxref "Genbank:WP_000091308.1"; ID "cds-WP_000091308.1-2"; Name "WP_000091308.1"; Parent "gene-C7A06_RS33795"; gbkey "CDS"; inference "COORDINATES: ab initio prediction:GeneMarkS-2+"; locus_tag "C7A06_RS33795"; product "hypothetical protein"; protein_id "WP_000091308.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
326 NZ_CP027601.1 RefSeq gene 68166 69353 . + . gene_id "nbis-gene-5700"; ID "nbis-gene-5700"; Name "C7A06_RS33800"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33800";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
327 NZ_CP027601.1 RefSeq transcript 68166 69353 . + . gene_id "nbis-gene-5700"; transcript_id "gene-C7A06_RS33800"; ID "gene-C7A06_RS33800"; Name "C7A06_RS33800"; Parent "nbis-gene-5700"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33800"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
328 NZ_CP027601.1 Protein Homology exon 68166 69353 . + . gene_id "nbis-gene-5700"; transcript_id "gene-C7A06_RS33800"; Dbxref "Genbank:WP_000937603.1"; ID "nbis-exon-5972"; Name "WP_000937603.1"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33800"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_013747467.1"; locus_tag "C7A06_RS33800"; product "IS91 family transposase"; protein_id "WP_000937603.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
329 NZ_CP027601.1 Protein Homology CDS 68166 69353 . + 0 gene_id "nbis-gene-5700"; transcript_id "gene-C7A06_RS33800"; Dbxref "Genbank:WP_000937603.1"; ID "cds-WP_000937603.1-2"; Name "WP_000937603.1"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33800"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_013747467.1"; locus_tag "C7A06_RS33800"; product "IS91 family transposase"; protein_id "WP_000937603.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
330 NZ_CP027601.1 RefSeq gene 69944 70951 . + . gene_id "nbis-pseudogene-272"; ID "nbis-pseudogene-272"; Name "C7A06_RS33810"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33810"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "69944";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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parents:
diff changeset
331 NZ_CP027601.1 RefSeq transcript 69944 70951 . + . gene_id "nbis-pseudogene-272"; transcript_id "gene-C7A06_RS33810"; ID "gene-C7A06_RS33810"; Name "C7A06_RS33810"; Parent "nbis-pseudogene-272"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33810"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "69944";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
332 NZ_CP027601.1 Protein Homology exon 69944 70951 . + . gene_id "nbis-pseudogene-272"; transcript_id "gene-C7A06_RS33810"; ID "nbis-exon-5973"; Note "frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus"; Ontology_term "GO:0006313" "GO:0003677" "GO:0004803"; Parent "gene-C7A06_RS33810"; gbkey "CDS"; go_function "DNA binding|0003677||IEA" "transposase activity|0004803||IEA"; go_process "transposition, DNA-mediated|0006313||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_013747467.1"; locus_tag "C7A06_RS33810"; partial "true"; product "transposase"; pseudo "true"; start_range "." "69944"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
333 NZ_CP027601.1 Protein Homology CDS 69944 70951 . + 0 gene_id "nbis-pseudogene-272"; transcript_id "gene-C7A06_RS33810"; ID "cds-C7A06_RS33810"; Note "frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus"; Ontology_term "GO:0006313" "GO:0003677" "GO:0004803"; Parent "gene-C7A06_RS33810"; gbkey "CDS"; go_function "DNA binding|0003677||IEA" "transposase activity|0004803||IEA"; go_process "transposition, DNA-mediated|0006313||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_013747467.1"; locus_tag "C7A06_RS33810"; partial "true"; product "transposase"; pseudo "true"; start_range "." "69944"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
334 NZ_CP027601.1 RefSeq gene 71571 73080 . + . gene_id "nbis-pseudogene-273"; ID "nbis-pseudogene-273"; Name "C7A06_RS33815"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33815"; original_biotype "pseudogene"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
335 NZ_CP027601.1 RefSeq transcript 71571 73080 . + . gene_id "nbis-pseudogene-273"; transcript_id "gene-C7A06_RS33815"; ID "gene-C7A06_RS33815"; Name "C7A06_RS33815"; Parent "nbis-pseudogene-273"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33815"; original_biotype "mrna"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
336 NZ_CP027601.1 Protein Homology exon 71571 73080 . + . gene_id "nbis-pseudogene-273"; transcript_id "gene-C7A06_RS33815"; ID "nbis-exon-5974"; Note "frameshifted"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33815"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001368704.1"; locus_tag "C7A06_RS33815"; product "ISL3 family transposase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
337 NZ_CP027601.1 Protein Homology CDS 71571 73080 . + 0 gene_id "nbis-pseudogene-273"; transcript_id "gene-C7A06_RS33815"; ID "cds-C7A06_RS33815"; Note "frameshifted"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33815"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001368704.1"; locus_tag "C7A06_RS33815"; product "ISL3 family transposase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
338 NZ_CP027601.1 RefSeq gene 73131 73245 . - . gene_id "nbis-pseudogene-274"; ID "nbis-pseudogene-274"; Name "C7A06_RS33820"; end_range "73245" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33820"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "73131";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
339 NZ_CP027601.1 RefSeq transcript 73131 73245 . - . gene_id "nbis-pseudogene-274"; transcript_id "gene-C7A06_RS33820"; ID "gene-C7A06_RS33820"; Name "C7A06_RS33820"; Parent "nbis-pseudogene-274"; end_range "73245" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33820"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "73131";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
340 NZ_CP027601.1 Protein Homology exon 73131 73245 . - . gene_id "nbis-pseudogene-274"; transcript_id "gene-C7A06_RS33820"; ID "nbis-exon-5975"; Note "frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus"; Parent "gene-C7A06_RS33820"; end_range "73245" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1"; locus_tag "C7A06_RS33820"; partial "true"; product "IS3 family transposase"; pseudo "true"; start_range "." "73131"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
341 NZ_CP027601.1 Protein Homology CDS 73131 73245 . - 0 gene_id "nbis-pseudogene-274"; transcript_id "gene-C7A06_RS33820"; ID "cds-C7A06_RS33820"; Note "frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus"; Parent "gene-C7A06_RS33820"; end_range "73245" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1"; locus_tag "C7A06_RS33820"; partial "true"; product "IS3 family transposase"; pseudo "true"; start_range "." "73131"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
342 NZ_CP027601.1 RefSeq gene 73332 73808 . + . gene_id "nbis-gene-5701"; ID "nbis-gene-5701"; Name "C7A06_RS33825"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33825";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
343 NZ_CP027601.1 RefSeq transcript 73332 73808 . + . gene_id "nbis-gene-5701"; transcript_id "gene-C7A06_RS33825"; ID "gene-C7A06_RS33825"; Name "C7A06_RS33825"; Parent "nbis-gene-5701"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33825"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
344 NZ_CP027601.1 Protein Homology exon 73332 73808 . + . gene_id "nbis-gene-5701"; transcript_id "gene-C7A06_RS33825"; Dbxref "Genbank:WP_000422675.1"; ID "nbis-exon-5976"; Name "WP_000422675.1"; Parent "gene-C7A06_RS33825"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000422669.1"; locus_tag "C7A06_RS33825"; product "transposase"; protein_id "WP_000422675.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
345 NZ_CP027601.1 Protein Homology CDS 73332 73808 . + 0 gene_id "nbis-gene-5701"; transcript_id "gene-C7A06_RS33825"; Dbxref "Genbank:WP_000422675.1"; ID "cds-WP_000422675.1"; Name "WP_000422675.1"; Parent "gene-C7A06_RS33825"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000422669.1"; locus_tag "C7A06_RS33825"; product "transposase"; protein_id "WP_000422675.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
346 NZ_CP027601.1 RefSeq gene 73789 74941 . + . gene_id "nbis-pseudogene-275"; ID "nbis-pseudogene-275"; Name "C7A06_RS33830"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33830"; original_biotype "pseudogene"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
347 NZ_CP027601.1 RefSeq transcript 73789 74941 . + . gene_id "nbis-pseudogene-275"; transcript_id "gene-C7A06_RS33830"; ID "gene-C7A06_RS33830"; Name "C7A06_RS33830"; Parent "nbis-pseudogene-275"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33830"; original_biotype "mrna"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
348 NZ_CP027601.1 Protein Homology exon 73789 74941 . + . gene_id "nbis-pseudogene-275"; transcript_id "gene-C7A06_RS33830"; ID "nbis-exon-5977"; Note "frameshifted"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33830"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1"; locus_tag "C7A06_RS33830"; product "IS3 family transposase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
349 NZ_CP027601.1 Protein Homology CDS 73789 74941 . + 0 gene_id "nbis-pseudogene-275"; transcript_id "gene-C7A06_RS33830"; ID "cds-C7A06_RS33830"; Note "frameshifted"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33830"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1"; locus_tag "C7A06_RS33830"; product "IS3 family transposase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
350 NZ_CP027601.1 RefSeq gene 75004 76453 . + . gene_id "nbis-pseudogene-276"; ID "nbis-pseudogene-276"; Name "C7A06_RS33835"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33835"; original_biotype "pseudogene"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
351 NZ_CP027601.1 RefSeq transcript 75004 76453 . + . gene_id "nbis-pseudogene-276"; transcript_id "gene-C7A06_RS33835"; ID "gene-C7A06_RS33835"; Name "C7A06_RS33835"; Parent "nbis-pseudogene-276"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33835"; original_biotype "mrna"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
352 NZ_CP027601.1 Protein Homology exon 75004 76453 . + . gene_id "nbis-pseudogene-276"; transcript_id "gene-C7A06_RS33835"; ID "nbis-exon-5978"; Note "frameshifted; internal stop"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33835"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1"; locus_tag "C7A06_RS33835"; product "IS66 family transposase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
353 NZ_CP027601.1 Protein Homology CDS 75004 76453 . + 0 gene_id "nbis-pseudogene-276"; transcript_id "gene-C7A06_RS33835"; ID "cds-C7A06_RS33835"; Note "frameshifted; internal stop"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33835"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1"; locus_tag "C7A06_RS33835"; product "IS66 family transposase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
354 NZ_CP027601.1 RefSeq gene 76520 77012 . - . gene_id "nbis-pseudogene-277"; ID "nbis-pseudogene-277"; Name "C7A06_RS33840"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33840"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "76520";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
355 NZ_CP027601.1 RefSeq transcript 76520 77012 . - . gene_id "nbis-pseudogene-277"; transcript_id "gene-C7A06_RS33840"; ID "gene-C7A06_RS33840"; Name "C7A06_RS33840"; Parent "nbis-pseudogene-277"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33840"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "76520";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
356 NZ_CP027601.1 Protein Homology exon 76520 77012 . - . gene_id "nbis-pseudogene-277"; transcript_id "gene-C7A06_RS33840"; ID "nbis-exon-5979"; Note "frameshifted; incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS33840"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_086558155.1"; locus_tag "C7A06_RS33840"; partial "true"; product "IS3 family transposase"; pseudo "true"; start_range "." "76520"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
357 NZ_CP027601.1 Protein Homology CDS 76520 77012 . - 0 gene_id "nbis-pseudogene-277"; transcript_id "gene-C7A06_RS33840"; ID "cds-C7A06_RS33840"; Note "frameshifted; incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS33840"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_086558155.1"; locus_tag "C7A06_RS33840"; partial "true"; product "IS3 family transposase"; pseudo "true"; start_range "." "76520"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
358 NZ_CP027601.1 RefSeq gene 76935 77165 . + . gene_id "nbis-gene-5702"; ID "nbis-gene-5702"; Name "C7A06_RS33845"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33845";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
359 NZ_CP027601.1 RefSeq transcript 76935 77165 . + . gene_id "nbis-gene-5702"; transcript_id "gene-C7A06_RS33845"; ID "gene-C7A06_RS33845"; Name "C7A06_RS33845"; Parent "nbis-gene-5702"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33845"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
360 NZ_CP027601.1 Protein Homology exon 76935 77165 . + . gene_id "nbis-gene-5702"; transcript_id "gene-C7A06_RS33845"; Dbxref "Genbank:WP_001443774.1"; ID "nbis-exon-5980"; Name "WP_001443774.1"; Parent "gene-C7A06_RS33845"; gbkey "CDS"; inference "COORDINATES: protein motif:HMM:NF015365.2"; locus_tag "C7A06_RS33845"; product "IS1 family transposase"; protein_id "WP_001443774.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
361 NZ_CP027601.1 Protein Homology CDS 76935 77165 . + 0 gene_id "nbis-gene-5702"; transcript_id "gene-C7A06_RS33845"; Dbxref "Genbank:WP_001443774.1"; ID "cds-WP_001443774.1"; Name "WP_001443774.1"; Parent "gene-C7A06_RS33845"; gbkey "CDS"; inference "COORDINATES: protein motif:HMM:NF015365.2"; locus_tag "C7A06_RS33845"; product "IS1 family transposase"; protein_id "WP_001443774.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
362 NZ_CP027601.1 RefSeq gene 77280 86778 . + . gene_id "nbis-pseudogene-278"; ID "nbis-pseudogene-278"; Name "toxB"; gbkey "Gene"; gene "toxB"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33850"; original_biotype "pseudogene"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
363 NZ_CP027601.1 RefSeq transcript 77280 86778 . + . gene_id "nbis-pseudogene-278"; transcript_id "gene-C7A06_RS33850"; ID "gene-C7A06_RS33850"; Name "toxB"; Parent "nbis-pseudogene-278"; gbkey "Gene"; gene "toxB"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33850"; original_biotype "mrna"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
364 NZ_CP027601.1 Protein Homology exon 77280 86778 . + . gene_id "nbis-pseudogene-278"; transcript_id "gene-C7A06_RS33850"; ID "nbis-exon-5981"; Note "frameshifted"; Parent "gene-C7A06_RS33850"; gbkey "CDS"; gene "toxB"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000581688.1"; locus_tag "C7A06_RS33850"; product "toxin B"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
365 NZ_CP027601.1 Protein Homology CDS 77280 86778 . + 0 gene_id "nbis-pseudogene-278"; transcript_id "gene-C7A06_RS33850"; ID "cds-C7A06_RS33850"; Note "frameshifted"; Parent "gene-C7A06_RS33850"; gbkey "CDS"; gene "toxB"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000581688.1"; locus_tag "C7A06_RS33850"; product "toxin B"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
366 NZ_CP027601.1 RefSeq gene 87738 88769 . - . gene_id "nbis-gene-5703"; ID "nbis-gene-5703"; Name "C7A06_RS33865"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33865";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
367 NZ_CP027601.1 RefSeq transcript 87738 88769 . - . gene_id "nbis-gene-5703"; transcript_id "gene-C7A06_RS33865"; ID "gene-C7A06_RS33865"; Name "C7A06_RS33865"; Parent "nbis-gene-5703"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33865"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
368 NZ_CP027601.1 Protein Homology exon 87738 88769 . - . gene_id "nbis-gene-5703"; transcript_id "gene-C7A06_RS33865"; Dbxref "Genbank:WP_000907857.1"; ID "nbis-exon-5982"; Name "WP_000907857.1"; Parent "gene-C7A06_RS33865"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000907860.1"; locus_tag "C7A06_RS33865"; product "replication initiation protein"; protein_id "WP_000907857.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
369 NZ_CP027601.1 Protein Homology CDS 87738 88769 . - 0 gene_id "nbis-gene-5703"; transcript_id "gene-C7A06_RS33865"; Dbxref "Genbank:WP_000907857.1"; ID "cds-WP_000907857.1"; Name "WP_000907857.1"; Parent "gene-C7A06_RS33865"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000907860.1"; locus_tag "C7A06_RS33865"; product "replication initiation protein"; protein_id "WP_000907857.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
370 NZ_CP027601.1 RefSeq gene 89478 90119 . + . gene_id "nbis-gene-5704"; ID "nbis-gene-5704"; Name "C7A06_RS33880"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33880";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
371 NZ_CP027601.1 RefSeq transcript 89478 90119 . + . gene_id "nbis-gene-5704"; transcript_id "gene-C7A06_RS33880"; ID "gene-C7A06_RS33880"; Name "C7A06_RS33880"; Parent "nbis-gene-5704"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33880"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
372 NZ_CP027601.1 Protein Homology exon 89478 90119 . + . gene_id "nbis-gene-5704"; transcript_id "gene-C7A06_RS33880"; Dbxref "Genbank:WP_000335839.1"; ID "nbis-exon-5983"; Name "WP_000335839.1"; Parent "gene-C7A06_RS33880"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000335849.1"; locus_tag "C7A06_RS33880"; product "transcription termination factor NusG"; protein_id "WP_000335839.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
373 NZ_CP027601.1 Protein Homology CDS 89478 90119 . + 0 gene_id "nbis-gene-5704"; transcript_id "gene-C7A06_RS33880"; Dbxref "Genbank:WP_000335839.1"; ID "cds-WP_000335839.1"; Name "WP_000335839.1"; Parent "gene-C7A06_RS33880"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000335849.1"; locus_tag "C7A06_RS33880"; product "transcription termination factor NusG"; protein_id "WP_000335839.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
374 NZ_CP027601.1 RefSeq gene 90260 90925 . + . gene_id "nbis-gene-5705"; ID "nbis-gene-5705"; Name "C7A06_RS33885"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33885";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
375 NZ_CP027601.1 RefSeq transcript 90260 90925 . + . gene_id "nbis-gene-5705"; transcript_id "gene-C7A06_RS33885"; ID "gene-C7A06_RS33885"; Name "C7A06_RS33885"; Parent "nbis-gene-5705"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33885"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
376 NZ_CP027601.1 Protein Homology exon 90260 90925 . + . gene_id "nbis-gene-5705"; transcript_id "gene-C7A06_RS33885"; Dbxref "Genbank:WP_000154135.1"; ID "nbis-exon-5984"; Name "WP_000154135.1"; Parent "gene-C7A06_RS33885"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000154135.1"; locus_tag "C7A06_RS33885"; product "hypothetical protein"; protein_id "WP_000154135.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
377 NZ_CP027601.1 Protein Homology CDS 90260 90925 . + 0 gene_id "nbis-gene-5705"; transcript_id "gene-C7A06_RS33885"; Dbxref "Genbank:WP_000154135.1"; ID "cds-WP_000154135.1"; Name "WP_000154135.1"; Parent "gene-C7A06_RS33885"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000154135.1"; locus_tag "C7A06_RS33885"; product "hypothetical protein"; protein_id "WP_000154135.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
378 NZ_CP027601.1 RefSeq gene 91191 91579 . + . gene_id "nbis-pseudogene-279"; ID "nbis-pseudogene-279"; Name "C7A06_RS33895"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33895"; original_biotype "pseudogene"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
379 NZ_CP027601.1 RefSeq transcript 91191 91579 . + . gene_id "nbis-pseudogene-279"; transcript_id "gene-C7A06_RS33895"; ID "gene-C7A06_RS33895"; Name "C7A06_RS33895"; Parent "nbis-pseudogene-279"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33895"; original_biotype "mrna"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
380 NZ_CP027601.1 Protein Homology exon 91191 91579 . + . gene_id "nbis-pseudogene-279"; transcript_id "gene-C7A06_RS33895"; ID "nbis-exon-5985"; Note "frameshifted"; Parent "gene-C7A06_RS33895"; gbkey "CDS"; inference "COORDINATES: protein motif:HMM:NF018941.2"; locus_tag "C7A06_RS33895"; product "YqiJ family protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
381 NZ_CP027601.1 Protein Homology CDS 91191 91579 . + 0 gene_id "nbis-pseudogene-279"; transcript_id "gene-C7A06_RS33895"; ID "cds-C7A06_RS33895"; Note "frameshifted"; Parent "gene-C7A06_RS33895"; gbkey "CDS"; inference "COORDINATES: protein motif:HMM:NF018941.2"; locus_tag "C7A06_RS33895"; product "YqiJ family protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
382 NZ_CP027601.1 RefSeq gene 91582 92590 . - . gene_id "nbis-pseudogene-280"; ID "nbis-pseudogene-280"; Name "C7A06_RS33900"; end_range "92590" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33900"; original_biotype "pseudogene"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
383 NZ_CP027601.1 RefSeq transcript 91582 92590 . - . gene_id "nbis-pseudogene-280"; transcript_id "gene-C7A06_RS33900"; ID "gene-C7A06_RS33900"; Name "C7A06_RS33900"; Parent "nbis-pseudogene-280"; end_range "92590" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33900"; original_biotype "mrna"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
384 NZ_CP027601.1 Protein Homology exon 91582 92590 . - . gene_id "nbis-pseudogene-280"; transcript_id "gene-C7A06_RS33900"; ID "nbis-exon-5986"; Note "frameshifted; incomplete; missing N-terminus"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33900"; end_range "92590" "."; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001066419.1"; locus_tag "C7A06_RS33900"; partial "true"; product "IS66 family transposase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
385 NZ_CP027601.1 Protein Homology CDS 91582 92590 . - 2 gene_id "nbis-pseudogene-280"; transcript_id "gene-C7A06_RS33900"; ID "cds-C7A06_RS33900"; Note "frameshifted; incomplete; missing N-terminus"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS33900"; end_range "92590" "."; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001066419.1"; locus_tag "C7A06_RS33900"; partial "true"; product "IS66 family transposase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
386 NZ_CP027599.1 RefSeq gene 1052 2152 . + . gene_id "nbis-gene-2"; ID "nbis-gene-2"; Name "dnaN"; gbkey "Gene"; gene "dnaN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00010";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
387 NZ_CP027599.1 RefSeq transcript 1052 2152 . + . gene_id "nbis-gene-2"; transcript_id "gene-C7A06_RS00010"; ID "gene-C7A06_RS00010"; Name "dnaN"; Parent "nbis-gene-2"; gbkey "Gene"; gene "dnaN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00010"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
388 NZ_CP027599.1 Protein Homology exon 1052 2152 . + . gene_id "nbis-gene-2"; transcript_id "gene-C7A06_RS00010"; Dbxref "Genbank:WP_000673464.1"; ID "nbis-exon-2"; Name "WP_000673464.1"; Ontology_term "GO:0006260" "GO:0003887" "GO:0009360"; Parent "gene-C7A06_RS00010"; gbkey "CDS"; gene "dnaN"; go_component "DNA polymerase III complex|0009360||IEA"; go_function "DNA-directed DNA polymerase activity|0003887||IEA"; go_process "DNA replication|0006260||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1"; locus_tag "C7A06_RS00010"; product "DNA polymerase III subunit beta"; protein_id "WP_000673464.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
389 NZ_CP027599.1 Protein Homology CDS 1052 2152 . + 0 gene_id "nbis-gene-2"; transcript_id "gene-C7A06_RS00010"; Dbxref "Genbank:WP_000673464.1"; ID "cds-WP_000673464.1"; Name "WP_000673464.1"; Ontology_term "GO:0006260" "GO:0003887" "GO:0009360"; Parent "gene-C7A06_RS00010"; gbkey "CDS"; gene "dnaN"; go_component "DNA polymerase III complex|0009360||IEA"; go_function "DNA-directed DNA polymerase activity|0003887||IEA"; go_process "DNA replication|0006260||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1"; locus_tag "C7A06_RS00010"; product "DNA polymerase III subunit beta"; protein_id "WP_000673464.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
390 NZ_CP027599.1 RefSeq gene 2152 3225 . + . gene_id "nbis-gene-3"; ID "nbis-gene-3"; Name "recF"; gbkey "Gene"; gene "recF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00015";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
391 NZ_CP027599.1 RefSeq transcript 2152 3225 . + . gene_id "nbis-gene-3"; transcript_id "gene-C7A06_RS00015"; ID "gene-C7A06_RS00015"; Name "recF"; Parent "nbis-gene-3"; gbkey "Gene"; gene "recF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00015"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
392 NZ_CP027599.1 Protein Homology exon 2152 3225 . + . gene_id "nbis-gene-3"; transcript_id "gene-C7A06_RS00015"; Dbxref "Genbank:WP_000060112.1"; ID "nbis-exon-3"; Name "WP_000060112.1"; Ontology_term "GO:0006281" "GO:0003697" "GO:0005524"; Parent "gene-C7A06_RS00015"; gbkey "CDS"; gene "recF"; go_function "single-stranded DNA binding|0003697||IEA" "ATP binding|0005524||IEA"; go_process "DNA repair|0006281||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1"; locus_tag "C7A06_RS00015"; product "DNA replication/repair protein RecF"; protein_id "WP_000060112.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
393 NZ_CP027599.1 Protein Homology CDS 2152 3225 . + 0 gene_id "nbis-gene-3"; transcript_id "gene-C7A06_RS00015"; Dbxref "Genbank:WP_000060112.1"; ID "cds-WP_000060112.1"; Name "WP_000060112.1"; Ontology_term "GO:0006281" "GO:0003697" "GO:0005524"; Parent "gene-C7A06_RS00015"; gbkey "CDS"; gene "recF"; go_function "single-stranded DNA binding|0003697||IEA" "ATP binding|0005524||IEA"; go_process "DNA repair|0006281||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1"; locus_tag "C7A06_RS00015"; product "DNA replication/repair protein RecF"; protein_id "WP_000060112.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
394 NZ_CP027599.1 RefSeq gene 3254 5668 . + . gene_id "nbis-gene-4"; ID "nbis-gene-4"; Name "gyrB"; gbkey "Gene"; gene "gyrB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00020";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
395 NZ_CP027599.1 RefSeq transcript 3254 5668 . + . gene_id "nbis-gene-4"; transcript_id "gene-C7A06_RS00020"; ID "gene-C7A06_RS00020"; Name "gyrB"; Parent "nbis-gene-4"; gbkey "Gene"; gene "gyrB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00020"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
396 NZ_CP027599.1 Protein Homology exon 3254 5668 . + . gene_id "nbis-gene-4"; transcript_id "gene-C7A06_RS00020"; Dbxref "Genbank:WP_000072067.1"; ID "nbis-exon-4"; Name "WP_000072067.1"; Ontology_term "GO:0006265" "GO:0003918" "GO:0009330"; Parent "gene-C7A06_RS00020"; gbkey "CDS"; gene "gyrB"; go_component "DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex|0009330||IEA"; go_function "DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity|0003918||IEA"; go_process "DNA topological change|0006265||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1"; locus_tag "C7A06_RS00020"; product "DNA topoisomerase (ATP-hydrolyzing) subunit B"; protein_id "WP_000072067.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
397 NZ_CP027599.1 Protein Homology CDS 3254 5668 . + 0 gene_id "nbis-gene-4"; transcript_id "gene-C7A06_RS00020"; Dbxref "Genbank:WP_000072067.1"; ID "cds-WP_000072067.1"; Name "WP_000072067.1"; Ontology_term "GO:0006265" "GO:0003918" "GO:0009330"; Parent "gene-C7A06_RS00020"; gbkey "CDS"; gene "gyrB"; go_component "DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex|0009330||IEA"; go_function "DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity|0003918||IEA"; go_process "DNA topological change|0006265||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1"; locus_tag "C7A06_RS00020"; product "DNA topoisomerase (ATP-hydrolyzing) subunit B"; protein_id "WP_000072067.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
398 NZ_CP027599.1 RefSeq gene 5908 6306 . + . gene_id "nbis-gene-5"; ID "nbis-gene-5"; Name "yidB"; gbkey "Gene"; gene "yidB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00025";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
399 NZ_CP027599.1 RefSeq transcript 5908 6306 . + . gene_id "nbis-gene-5"; transcript_id "gene-C7A06_RS00025"; ID "gene-C7A06_RS00025"; Name "yidB"; Parent "nbis-gene-5"; gbkey "Gene"; gene "yidB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00025"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
400 NZ_CP027599.1 Protein Homology exon 5908 6306 . + . gene_id "nbis-gene-5"; transcript_id "gene-C7A06_RS00025"; Dbxref "Genbank:WP_000522208.1"; ID "nbis-exon-5"; Name "WP_000522208.1"; Parent "gene-C7A06_RS00025"; gbkey "CDS"; gene "yidB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418153.4"; locus_tag "C7A06_RS00025"; product "YidB family protein"; protein_id "WP_000522208.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
401 NZ_CP027599.1 Protein Homology CDS 5908 6306 . + 0 gene_id "nbis-gene-5"; transcript_id "gene-C7A06_RS00025"; Dbxref "Genbank:WP_000522208.1"; ID "cds-WP_000522208.1"; Name "WP_000522208.1"; Parent "gene-C7A06_RS00025"; gbkey "CDS"; gene "yidB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418153.4"; locus_tag "C7A06_RS00025"; product "YidB family protein"; protein_id "WP_000522208.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
402 NZ_CP027599.1 RefSeq gene 6421 7233 . + . gene_id "nbis-gene-6"; ID "nbis-gene-6"; Name "yidA"; gbkey "Gene"; gene "yidA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00030";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
403 NZ_CP027599.1 RefSeq transcript 6421 7233 . + . gene_id "nbis-gene-6"; transcript_id "gene-C7A06_RS00030"; ID "gene-C7A06_RS00030"; Name "yidA"; Parent "nbis-gene-6"; gbkey "Gene"; gene "yidA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00030"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
404 NZ_CP027599.1 Protein Homology exon 6421 7233 . + . gene_id "nbis-gene-6"; transcript_id "gene-C7A06_RS00030"; Dbxref "Genbank:WP_000985541.1"; ID "nbis-exon-6"; Name "WP_000985541.1"; Ontology_term "GO:0016787"; Parent "gene-C7A06_RS00030"; gbkey "CDS"; gene "yidA"; go_function "hydrolase activity|0016787||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418152.1"; locus_tag "C7A06_RS00030"; product "sugar-phosphatase"; protein_id "WP_000985541.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
405 NZ_CP027599.1 Protein Homology CDS 6421 7233 . + 0 gene_id "nbis-gene-6"; transcript_id "gene-C7A06_RS00030"; Dbxref "Genbank:WP_000985541.1"; ID "cds-WP_000985541.1"; Name "WP_000985541.1"; Ontology_term "GO:0016787"; Parent "gene-C7A06_RS00030"; gbkey "CDS"; gene "yidA"; go_function "hydrolase activity|0016787||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418152.1"; locus_tag "C7A06_RS00030"; product "sugar-phosphatase"; protein_id "WP_000985541.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
406 NZ_CP027599.1 RefSeq gene 7279 7935 . - . gene_id "nbis-gene-7"; ID "nbis-gene-7"; Name "C7A06_RS00035"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00035";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
407 NZ_CP027599.1 RefSeq transcript 7279 7935 . - . gene_id "nbis-gene-7"; transcript_id "gene-C7A06_RS00035"; ID "gene-C7A06_RS00035"; Name "C7A06_RS00035"; Parent "nbis-gene-7"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00035"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
408 NZ_CP027599.1 Protein Homology exon 7279 7935 . - . gene_id "nbis-gene-7"; transcript_id "gene-C7A06_RS00035"; Dbxref "Genbank:WP_000772931.1"; ID "nbis-exon-7"; Name "WP_000772931.1"; Parent "gene-C7A06_RS00035"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709504.1"; locus_tag "C7A06_RS00035"; product "hypothetical protein"; protein_id "WP_000772931.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
409 NZ_CP027599.1 Protein Homology CDS 7279 7935 . - 0 gene_id "nbis-gene-7"; transcript_id "gene-C7A06_RS00035"; Dbxref "Genbank:WP_000772931.1"; ID "cds-WP_000772931.1"; Name "WP_000772931.1"; Parent "gene-C7A06_RS00035"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709504.1"; locus_tag "C7A06_RS00035"; product "hypothetical protein"; protein_id "WP_000772931.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
410 NZ_CP027599.1 RefSeq gene 8213 8902 . + . gene_id "nbis-gene-8"; ID "nbis-gene-8"; Name "dgoR"; gbkey "Gene"; gene "dgoR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00040";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
411 NZ_CP027599.1 RefSeq transcript 8213 8902 . + . gene_id "nbis-gene-8"; transcript_id "gene-C7A06_RS00040"; ID "gene-C7A06_RS00040"; Name "dgoR"; Parent "nbis-gene-8"; gbkey "Gene"; gene "dgoR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00040"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
412 NZ_CP027599.1 Protein Homology exon 8213 8902 . + . gene_id "nbis-gene-8"; transcript_id "gene-C7A06_RS00040"; Dbxref "Genbank:WP_000174305.1"; ID "nbis-exon-8"; Name "WP_000174305.1"; Parent "gene-C7A06_RS00040"; gbkey "CDS"; gene "dgoR"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709505.1"; locus_tag "C7A06_RS00040"; product "D-galactonate utilization transcriptional regulator DgoR"; protein_id "WP_000174305.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
413 NZ_CP027599.1 Protein Homology CDS 8213 8902 . + 0 gene_id "nbis-gene-8"; transcript_id "gene-C7A06_RS00040"; Dbxref "Genbank:WP_000174305.1"; ID "cds-WP_000174305.1"; Name "WP_000174305.1"; Parent "gene-C7A06_RS00040"; gbkey "CDS"; gene "dgoR"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709505.1"; locus_tag "C7A06_RS00040"; product "D-galactonate utilization transcriptional regulator DgoR"; protein_id "WP_000174305.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
414 NZ_CP027599.1 RefSeq gene 8899 9777 . + . gene_id "nbis-gene-9"; ID "nbis-gene-9"; Name "dgoK"; gbkey "Gene"; gene "dgoK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00045";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
415 NZ_CP027599.1 RefSeq transcript 8899 9777 . + . gene_id "nbis-gene-9"; transcript_id "gene-C7A06_RS00045"; ID "gene-C7A06_RS00045"; Name "dgoK"; Parent "nbis-gene-9"; gbkey "Gene"; gene "dgoK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00045"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
416 NZ_CP027599.1 Protein Homology exon 8899 9777 . + . gene_id "nbis-gene-9"; transcript_id "gene-C7A06_RS00045"; Dbxref "Genbank:WP_000127112.1"; ID "nbis-exon-9"; Name "WP_000127112.1"; Parent "gene-C7A06_RS00045"; gbkey "CDS"; gene "dgoK"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709506.1"; locus_tag "C7A06_RS00045"; product "2-dehydro-3-deoxygalactonokinase"; protein_id "WP_000127112.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
417 NZ_CP027599.1 Protein Homology CDS 8899 9777 . + 0 gene_id "nbis-gene-9"; transcript_id "gene-C7A06_RS00045"; Dbxref "Genbank:WP_000127112.1"; ID "cds-WP_000127112.1"; Name "WP_000127112.1"; Parent "gene-C7A06_RS00045"; gbkey "CDS"; gene "dgoK"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709506.1"; locus_tag "C7A06_RS00045"; product "2-dehydro-3-deoxygalactonokinase"; protein_id "WP_000127112.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
418 NZ_CP027599.1 RefSeq gene 9761 10378 . + . gene_id "nbis-gene-10"; ID "nbis-gene-10"; Name "dgoA"; gbkey "Gene"; gene "dgoA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00050";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
419 NZ_CP027599.1 RefSeq transcript 9761 10378 . + . gene_id "nbis-gene-10"; transcript_id "gene-C7A06_RS00050"; ID "gene-C7A06_RS00050"; Name "dgoA"; Parent "nbis-gene-10"; gbkey "Gene"; gene "dgoA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00050"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
420 NZ_CP027599.1 Protein Homology exon 9761 10378 . + . gene_id "nbis-gene-10"; transcript_id "gene-C7A06_RS00050"; Dbxref "Genbank:WP_001198699.1"; ID "nbis-exon-10"; Name "WP_001198699.1"; Parent "gene-C7A06_RS00050"; gbkey "CDS"; gene "dgoA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026238.1"; locus_tag "C7A06_RS00050"; product "2-dehydro-3-deoxy-6-phosphogalactonate aldolase"; protein_id "WP_001198699.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
421 NZ_CP027599.1 Protein Homology CDS 9761 10378 . + 0 gene_id "nbis-gene-10"; transcript_id "gene-C7A06_RS00050"; Dbxref "Genbank:WP_001198699.1"; ID "cds-WP_001198699.1"; Name "WP_001198699.1"; Parent "gene-C7A06_RS00050"; gbkey "CDS"; gene "dgoA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026238.1"; locus_tag "C7A06_RS00050"; product "2-dehydro-3-deoxy-6-phosphogalactonate aldolase"; protein_id "WP_001198699.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
422 NZ_CP027599.1 RefSeq gene 10375 11523 . + . gene_id "nbis-gene-11"; ID "nbis-gene-11"; Name "dgoD"; gbkey "Gene"; gene "dgoD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00055";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
423 NZ_CP027599.1 RefSeq transcript 10375 11523 . + . gene_id "nbis-gene-11"; transcript_id "gene-C7A06_RS00055"; ID "gene-C7A06_RS00055"; Name "dgoD"; Parent "nbis-gene-11"; gbkey "Gene"; gene "dgoD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00055"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
424 NZ_CP027599.1 Protein Homology exon 10375 11523 . + . gene_id "nbis-gene-11"; transcript_id "gene-C7A06_RS00055"; Dbxref "Genbank:WP_000705001.1"; ID "nbis-exon-11"; Name "WP_000705001.1"; Ontology_term "GO:0009063" "GO:0008869"; Parent "gene-C7A06_RS00055"; gbkey "CDS"; gene "dgoD"; go_function "galactonate dehydratase activity|0008869||IEA"; go_process "cellular amino acid catabolic process|0009063||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1"; locus_tag "C7A06_RS00055"; product "galactonate dehydratase"; protein_id "WP_000705001.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
425 NZ_CP027599.1 Protein Homology CDS 10375 11523 . + 0 gene_id "nbis-gene-11"; transcript_id "gene-C7A06_RS00055"; Dbxref "Genbank:WP_000705001.1"; ID "cds-WP_000705001.1"; Name "WP_000705001.1"; Ontology_term "GO:0009063" "GO:0008869"; Parent "gene-C7A06_RS00055"; gbkey "CDS"; gene "dgoD"; go_function "galactonate dehydratase activity|0008869||IEA"; go_process "cellular amino acid catabolic process|0009063||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1"; locus_tag "C7A06_RS00055"; product "galactonate dehydratase"; protein_id "WP_000705001.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
426 NZ_CP027599.1 RefSeq gene 11598 12935 . + . gene_id "nbis-gene-12"; ID "nbis-gene-12"; Name "dgoT"; gbkey "Gene"; gene "dgoT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00060";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
427 NZ_CP027599.1 RefSeq transcript 11598 12935 . + . gene_id "nbis-gene-12"; transcript_id "gene-C7A06_RS00060"; ID "gene-C7A06_RS00060"; Name "dgoT"; Parent "nbis-gene-12"; gbkey "Gene"; gene "dgoT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00060"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
428 NZ_CP027599.1 Protein Homology exon 11598 12935 . + . gene_id "nbis-gene-12"; transcript_id "gene-C7A06_RS00060"; Dbxref "Genbank:WP_000253455.1"; ID "nbis-exon-12"; Name "WP_000253455.1"; Parent "gene-C7A06_RS00060"; gbkey "CDS"; gene "dgoT"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709507.1"; locus_tag "C7A06_RS00060"; product "MFS transporter"; protein_id "WP_000253455.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
429 NZ_CP027599.1 Protein Homology CDS 11598 12935 . + 0 gene_id "nbis-gene-12"; transcript_id "gene-C7A06_RS00060"; Dbxref "Genbank:WP_000253455.1"; ID "cds-WP_000253455.1"; Name "WP_000253455.1"; Parent "gene-C7A06_RS00060"; gbkey "CDS"; gene "dgoT"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709507.1"; locus_tag "C7A06_RS00060"; product "MFS transporter"; protein_id "WP_000253455.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
430 NZ_CP027599.1 RefSeq gene 12932 13996 . - . gene_id "nbis-gene-13"; ID "nbis-gene-13"; Name "cbrA"; gbkey "Gene"; gene "cbrA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00065";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
431 NZ_CP027599.1 RefSeq transcript 12932 13996 . - . gene_id "nbis-gene-13"; transcript_id "gene-C7A06_RS00065"; ID "gene-C7A06_RS00065"; Name "cbrA"; Parent "nbis-gene-13"; gbkey "Gene"; gene "cbrA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00065"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
432 NZ_CP027599.1 Protein Homology exon 12932 13996 . - . gene_id "nbis-gene-13"; transcript_id "gene-C7A06_RS00065"; Dbxref "Genbank:WP_001341773.1"; ID "nbis-exon-13"; Name "WP_001341773.1"; Parent "gene-C7A06_RS00065"; gbkey "CDS"; gene "cbrA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418145.2"; locus_tag "C7A06_RS00065"; product "colicin M resistance lipid reductase CbrA"; protein_id "WP_001341773.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
433 NZ_CP027599.1 Protein Homology CDS 12932 13996 . - 0 gene_id "nbis-gene-13"; transcript_id "gene-C7A06_RS00065"; Dbxref "Genbank:WP_001341773.1"; ID "cds-WP_001341773.1"; Name "WP_001341773.1"; Parent "gene-C7A06_RS00065"; gbkey "CDS"; gene "cbrA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418145.2"; locus_tag "C7A06_RS00065"; product "colicin M resistance lipid reductase CbrA"; protein_id "WP_001341773.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
434 NZ_CP027599.1 RefSeq gene 14097 15311 . + . gene_id "nbis-gene-14"; ID "nbis-gene-14"; Name "yidR"; gbkey "Gene"; gene "yidR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00070";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
435 NZ_CP027599.1 RefSeq transcript 14097 15311 . + . gene_id "nbis-gene-14"; transcript_id "gene-C7A06_RS00070"; ID "gene-C7A06_RS00070"; Name "yidR"; Parent "nbis-gene-14"; gbkey "Gene"; gene "yidR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00070"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
436 NZ_CP027599.1 Protein Homology exon 14097 15311 . + . gene_id "nbis-gene-14"; transcript_id "gene-C7A06_RS00070"; Dbxref "Genbank:WP_001448315.1"; ID "nbis-exon-14"; Name "WP_001448315.1"; Parent "gene-C7A06_RS00070"; gbkey "CDS"; gene "yidR"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312656.3"; locus_tag "C7A06_RS00070"; product "DUF3748 domain-containing protein"; protein_id "WP_001448315.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
437 NZ_CP027599.1 Protein Homology CDS 14097 15311 . + 0 gene_id "nbis-gene-14"; transcript_id "gene-C7A06_RS00070"; Dbxref "Genbank:WP_001448315.1"; ID "cds-WP_001448315.1"; Name "WP_001448315.1"; Parent "gene-C7A06_RS00070"; gbkey "CDS"; gene "yidR"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312656.3"; locus_tag "C7A06_RS00070"; product "DUF3748 domain-containing protein"; protein_id "WP_001448315.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
438 NZ_CP027599.1 RefSeq gene 15313 15645 . - . gene_id "nbis-gene-15"; ID "nbis-gene-15"; Name "yidQ"; gbkey "Gene"; gene "yidQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00075";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
439 NZ_CP027599.1 RefSeq transcript 15313 15645 . - . gene_id "nbis-gene-15"; transcript_id "gene-C7A06_RS00075"; ID "gene-C7A06_RS00075"; Name "yidQ"; Parent "nbis-gene-15"; gbkey "Gene"; gene "yidQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00075"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
440 NZ_CP027599.1 Protein Homology exon 15313 15645 . - . gene_id "nbis-gene-15"; transcript_id "gene-C7A06_RS00075"; Dbxref "Genbank:WP_000620888.1"; ID "nbis-exon-15"; Name "WP_000620888.1"; Parent "gene-C7A06_RS00075"; gbkey "CDS"; gene "yidQ"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418143.2"; locus_tag "C7A06_RS00075"; product "YceK/YidQ family lipoprotein"; protein_id "WP_000620888.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
441 NZ_CP027599.1 Protein Homology CDS 15313 15645 . - 0 gene_id "nbis-gene-15"; transcript_id "gene-C7A06_RS00075"; Dbxref "Genbank:WP_000620888.1"; ID "cds-WP_000620888.1"; Name "WP_000620888.1"; Parent "gene-C7A06_RS00075"; gbkey "CDS"; gene "yidQ"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418143.2"; locus_tag "C7A06_RS00075"; product "YceK/YidQ family lipoprotein"; protein_id "WP_000620888.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
442 NZ_CP027599.1 RefSeq gene 15951 16364 . + . gene_id "nbis-gene-16"; ID "nbis-gene-16"; Name "ibpA"; gbkey "Gene"; gene "ibpA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00080";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
443 NZ_CP027599.1 RefSeq transcript 15951 16364 . + . gene_id "nbis-gene-16"; transcript_id "gene-C7A06_RS00080"; ID "gene-C7A06_RS00080"; Name "ibpA"; Parent "nbis-gene-16"; gbkey "Gene"; gene "ibpA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00080"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
444 NZ_CP027599.1 Protein Homology exon 15951 16364 . + . gene_id "nbis-gene-16"; transcript_id "gene-C7A06_RS00080"; Dbxref "Genbank:WP_001243437.1"; ID "nbis-exon-16"; Name "WP_001243437.1"; Parent "gene-C7A06_RS00080"; gbkey "CDS"; gene "ibpA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1"; locus_tag "C7A06_RS00080"; product "heat shock chaperone IbpA"; protein_id "WP_001243437.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
445 NZ_CP027599.1 Protein Homology CDS 15951 16364 . + 0 gene_id "nbis-gene-16"; transcript_id "gene-C7A06_RS00080"; Dbxref "Genbank:WP_001243437.1"; ID "cds-WP_001243437.1"; Name "WP_001243437.1"; Parent "gene-C7A06_RS00080"; gbkey "CDS"; gene "ibpA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1"; locus_tag "C7A06_RS00080"; product "heat shock chaperone IbpA"; protein_id "WP_001243437.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
446 NZ_CP027599.1 RefSeq gene 16476 16904 . + . gene_id "nbis-gene-17"; ID "nbis-gene-17"; Name "ibpB"; gbkey "Gene"; gene "ibpB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00085";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
447 NZ_CP027599.1 RefSeq transcript 16476 16904 . + . gene_id "nbis-gene-17"; transcript_id "gene-C7A06_RS00085"; ID "gene-C7A06_RS00085"; Name "ibpB"; Parent "nbis-gene-17"; gbkey "Gene"; gene "ibpB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00085"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
448 NZ_CP027599.1 Protein Homology exon 16476 16904 . + . gene_id "nbis-gene-17"; transcript_id "gene-C7A06_RS00085"; Dbxref "Genbank:WP_001243431.1"; ID "nbis-exon-17"; Name "WP_001243431.1"; Parent "gene-C7A06_RS00085"; gbkey "CDS"; gene "ibpB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709512.2"; locus_tag "C7A06_RS00085"; product "heat shock chaperone IbpB"; protein_id "WP_001243431.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
449 NZ_CP027599.1 Protein Homology CDS 16476 16904 . + 0 gene_id "nbis-gene-17"; transcript_id "gene-C7A06_RS00085"; Dbxref "Genbank:WP_001243431.1"; ID "cds-WP_001243431.1"; Name "WP_001243431.1"; Parent "gene-C7A06_RS00085"; gbkey "CDS"; gene "ibpB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709512.2"; locus_tag "C7A06_RS00085"; product "heat shock chaperone IbpB"; protein_id "WP_001243431.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
450 NZ_CP027599.1 RefSeq gene 17101 18762 . + . gene_id "nbis-gene-18"; ID "nbis-gene-18"; Name "yidE"; gbkey "Gene"; gene "yidE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00090";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
451 NZ_CP027599.1 RefSeq transcript 17101 18762 . + . gene_id "nbis-gene-18"; transcript_id "gene-C7A06_RS00090"; ID "gene-C7A06_RS00090"; Name "yidE"; Parent "nbis-gene-18"; gbkey "Gene"; gene "yidE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00090"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
452 NZ_CP027599.1 Protein Homology exon 17101 18762 . + . gene_id "nbis-gene-18"; transcript_id "gene-C7A06_RS00090"; Dbxref "Genbank:WP_001279752.1"; ID "nbis-exon-18"; Name "WP_001279752.1"; Ontology_term "GO:0006813" "GO:0008324"; Parent "gene-C7A06_RS00090"; gbkey "CDS"; gene "yidE"; go_function "cation transmembrane transporter activity|0008324||IEA"; go_process "potassium ion transport|0006813||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312652.2"; locus_tag "C7A06_RS00090"; product "putative transporter"; protein_id "WP_001279752.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
453 NZ_CP027599.1 Protein Homology CDS 17101 18762 . + 0 gene_id "nbis-gene-18"; transcript_id "gene-C7A06_RS00090"; Dbxref "Genbank:WP_001279752.1"; ID "cds-WP_001279752.1"; Name "WP_001279752.1"; Ontology_term "GO:0006813" "GO:0008324"; Parent "gene-C7A06_RS00090"; gbkey "CDS"; gene "yidE"; go_function "cation transmembrane transporter activity|0008324||IEA"; go_process "potassium ion transport|0006813||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312652.2"; locus_tag "C7A06_RS00090"; product "putative transporter"; protein_id "WP_001279752.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
454 NZ_CP027599.1 RefSeq gene 18759 19475 . - . gene_id "nbis-gene-19"; ID "nbis-gene-19"; Name "yidP"; gbkey "Gene"; gene "yidP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00095";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
455 NZ_CP027599.1 RefSeq transcript 18759 19475 . - . gene_id "nbis-gene-19"; transcript_id "gene-C7A06_RS00095"; ID "gene-C7A06_RS00095"; Name "yidP"; Parent "nbis-gene-19"; gbkey "Gene"; gene "yidP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00095"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
456 NZ_CP027599.1 Protein Homology exon 18759 19475 . - . gene_id "nbis-gene-19"; transcript_id "gene-C7A06_RS00095"; Dbxref "Genbank:WP_001300779.1"; ID "nbis-exon-19"; Name "WP_001300779.1"; Parent "gene-C7A06_RS00095"; gbkey "CDS"; gene "yidP"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418139.1"; locus_tag "C7A06_RS00095"; product "GntR family transcriptional regulator"; protein_id "WP_001300779.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
457 NZ_CP027599.1 Protein Homology CDS 18759 19475 . - 0 gene_id "nbis-gene-19"; transcript_id "gene-C7A06_RS00095"; Dbxref "Genbank:WP_001300779.1"; ID "cds-WP_001300779.1"; Name "WP_001300779.1"; Parent "gene-C7A06_RS00095"; gbkey "CDS"; gene "yidP"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418139.1"; locus_tag "C7A06_RS00095"; product "GntR family transcriptional regulator"; protein_id "WP_001300779.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
458 NZ_CP027599.1 RefSeq gene 19771 21387 . + . gene_id "nbis-gene-20"; ID "nbis-gene-20"; Name "C7A06_RS00100"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00100";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
459 NZ_CP027599.1 RefSeq transcript 19771 21387 . + . gene_id "nbis-gene-20"; transcript_id "gene-C7A06_RS00100"; ID "gene-C7A06_RS00100"; Name "C7A06_RS00100"; Parent "nbis-gene-20"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00100"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
460 NZ_CP027599.1 Protein Homology exon 19771 21387 . + . gene_id "nbis-gene-20"; transcript_id "gene-C7A06_RS00100"; Dbxref "Genbank:WP_000952127.1"; ID "nbis-exon-20"; Name "WP_000952127.1"; Parent "gene-C7A06_RS00100"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312650.2"; locus_tag "C7A06_RS00100"; product "PTS sugar transporter subunit IIB"; protein_id "WP_000952127.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
461 NZ_CP027599.1 Protein Homology CDS 19771 21387 . + 0 gene_id "nbis-gene-20"; transcript_id "gene-C7A06_RS00100"; Dbxref "Genbank:WP_000952127.1"; ID "cds-WP_000952127.1"; Name "WP_000952127.1"; Parent "gene-C7A06_RS00100"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312650.2"; locus_tag "C7A06_RS00100"; product "PTS sugar transporter subunit IIB"; protein_id "WP_000952127.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
462 NZ_CP027599.1 RefSeq gene 21387 22201 . + . gene_id "nbis-pseudogene-1"; ID "nbis-pseudogene-1"; Name "C7A06_RS00105"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS00105"; original_biotype "pseudogene"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
463 NZ_CP027599.1 RefSeq transcript 21387 22201 . + . gene_id "nbis-pseudogene-1"; transcript_id "gene-C7A06_RS00105"; ID "gene-C7A06_RS00105"; Name "C7A06_RS00105"; Parent "nbis-pseudogene-1"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS00105"; original_biotype "mrna"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
464 NZ_CP027599.1 Protein Homology exon 21387 22201 . + . gene_id "nbis-pseudogene-1"; transcript_id "gene-C7A06_RS00105"; ID "nbis-exon-21"; Note "frameshifted"; Parent "gene-C7A06_RS00105"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312649.2"; locus_tag "C7A06_RS00105"; product "hypothetical protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
465 NZ_CP027599.1 Protein Homology CDS 21387 22201 . + 0 gene_id "nbis-pseudogene-1"; transcript_id "gene-C7A06_RS00105"; ID "cds-C7A06_RS00105"; Note "frameshifted"; Parent "gene-C7A06_RS00105"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312649.2"; locus_tag "C7A06_RS00105"; product "hypothetical protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
466 NZ_CP027599.1 RefSeq gene 22198 23091 . - . gene_id "nbis-gene-21"; ID "nbis-gene-21"; Name "yidL"; gbkey "Gene"; gene "yidL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00110";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
467 NZ_CP027599.1 RefSeq transcript 22198 23091 . - . gene_id "nbis-gene-21"; transcript_id "gene-C7A06_RS00110"; ID "gene-C7A06_RS00110"; Name "yidL"; Parent "nbis-gene-21"; gbkey "Gene"; gene "yidL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00110"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
468 NZ_CP027599.1 Protein Homology exon 22198 23091 . - . gene_id "nbis-gene-21"; transcript_id "gene-C7A06_RS00110"; Dbxref "Genbank:WP_001013540.1"; ID "nbis-exon-22"; Name "WP_001013540.1"; Parent "gene-C7A06_RS00110"; gbkey "CDS"; gene "yidL"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418136.2"; locus_tag "C7A06_RS00110"; product "AraC family transcriptional regulator"; protein_id "WP_001013540.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
469 NZ_CP027599.1 Protein Homology CDS 22198 23091 . - 0 gene_id "nbis-gene-21"; transcript_id "gene-C7A06_RS00110"; Dbxref "Genbank:WP_001013540.1"; ID "cds-WP_001013540.1"; Name "WP_001013540.1"; Parent "gene-C7A06_RS00110"; gbkey "CDS"; gene "yidL"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418136.2"; locus_tag "C7A06_RS00110"; product "AraC family transcriptional regulator"; protein_id "WP_001013540.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
470 NZ_CP027599.1 RefSeq gene 23258 24973 . + . gene_id "nbis-gene-22"; ID "nbis-gene-22"; Name "yidK"; gbkey "Gene"; gene "yidK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00115";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
471 NZ_CP027599.1 RefSeq transcript 23258 24973 . + . gene_id "nbis-gene-22"; transcript_id "gene-C7A06_RS00115"; ID "gene-C7A06_RS00115"; Name "yidK"; Parent "nbis-gene-22"; gbkey "Gene"; gene "yidK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00115"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
472 NZ_CP027599.1 Protein Homology exon 23258 24973 . + . gene_id "nbis-gene-22"; transcript_id "gene-C7A06_RS00115"; Dbxref "Genbank:WP_001087147.1"; ID "nbis-exon-23"; Name "WP_001087147.1"; Ontology_term "GO:0055085" "GO:0022857" "GO:0016020"; Parent "gene-C7A06_RS00115"; gbkey "CDS"; gene "yidK"; go_component "membrane|0016020||IEA"; go_function "transmembrane transporter activity|0022857||IEA"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418135.1"; locus_tag "C7A06_RS00115"; product "solute:sodium symporter family transporter"; protein_id "WP_001087147.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
473 NZ_CP027599.1 Protein Homology CDS 23258 24973 . + 0 gene_id "nbis-gene-22"; transcript_id "gene-C7A06_RS00115"; Dbxref "Genbank:WP_001087147.1"; ID "cds-WP_001087147.1"; Name "WP_001087147.1"; Ontology_term "GO:0055085" "GO:0022857" "GO:0016020"; Parent "gene-C7A06_RS00115"; gbkey "CDS"; gene "yidK"; go_component "membrane|0016020||IEA"; go_function "transmembrane transporter activity|0022857||IEA"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418135.1"; locus_tag "C7A06_RS00115"; product "solute:sodium symporter family transporter"; protein_id "WP_001087147.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
474 NZ_CP027599.1 RefSeq gene 24970 26463 . + . gene_id "nbis-gene-23"; ID "nbis-gene-23"; Name "yidJ"; gbkey "Gene"; gene "yidJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00120";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
475 NZ_CP027599.1 RefSeq transcript 24970 26463 . + . gene_id "nbis-gene-23"; transcript_id "gene-C7A06_RS00120"; ID "gene-C7A06_RS00120"; Name "yidJ"; Parent "nbis-gene-23"; gbkey "Gene"; gene "yidJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00120"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
476 NZ_CP027599.1 Protein Homology exon 24970 26463 . + . gene_id "nbis-gene-23"; transcript_id "gene-C7A06_RS00120"; Dbxref "Genbank:WP_000828487.1"; ID "nbis-exon-24"; Name "WP_000828487.1"; Ontology_term "GO:0008484"; Parent "gene-C7A06_RS00120"; gbkey "CDS"; gene "yidJ"; go_function "sulfuric ester hydrolase activity|0008484||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418134.1"; locus_tag "C7A06_RS00120"; product "sulfatase-like hydrolase/transferase"; protein_id "WP_000828487.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
477 NZ_CP027599.1 Protein Homology CDS 24970 26463 . + 0 gene_id "nbis-gene-23"; transcript_id "gene-C7A06_RS00120"; Dbxref "Genbank:WP_000828487.1"; ID "cds-WP_000828487.1"; Name "WP_000828487.1"; Ontology_term "GO:0008484"; Parent "gene-C7A06_RS00120"; gbkey "CDS"; gene "yidJ"; go_function "sulfuric ester hydrolase activity|0008484||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418134.1"; locus_tag "C7A06_RS00120"; product "sulfatase-like hydrolase/transferase"; protein_id "WP_000828487.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
478 NZ_CP027599.1 RefSeq gene 26510 26959 . - . gene_id "nbis-gene-24"; ID "nbis-gene-24"; Name "C7A06_RS00125"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00125";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
479 NZ_CP027599.1 RefSeq transcript 26510 26959 . - . gene_id "nbis-gene-24"; transcript_id "gene-C7A06_RS00125"; ID "gene-C7A06_RS00125"; Name "C7A06_RS00125"; Parent "nbis-gene-24"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00125"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
480 NZ_CP027599.1 Protein Homology exon 26510 26959 . - . gene_id "nbis-gene-24"; transcript_id "gene-C7A06_RS00125"; Dbxref "Genbank:WP_000511287.1"; ID "nbis-exon-25"; Name "WP_000511287.1"; Parent "gene-C7A06_RS00125"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418133.1"; locus_tag "C7A06_RS00125"; product "membrane protein"; protein_id "WP_000511287.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
481 NZ_CP027599.1 Protein Homology CDS 26510 26959 . - 0 gene_id "nbis-gene-24"; transcript_id "gene-C7A06_RS00125"; Dbxref "Genbank:WP_000511287.1"; ID "cds-WP_000511287.1"; Name "WP_000511287.1"; Parent "gene-C7A06_RS00125"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418133.1"; locus_tag "C7A06_RS00125"; product "membrane protein"; protein_id "WP_000511287.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
482 NZ_CP027599.1 RefSeq gene 27069 27416 . + . gene_id "nbis-gene-25"; ID "nbis-gene-25"; Name "yidH"; gbkey "Gene"; gene "yidH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00130";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
483 NZ_CP027599.1 RefSeq transcript 27069 27416 . + . gene_id "nbis-gene-25"; transcript_id "gene-C7A06_RS00130"; ID "gene-C7A06_RS00130"; Name "yidH"; Parent "nbis-gene-25"; gbkey "Gene"; gene "yidH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00130"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
484 NZ_CP027599.1 Protein Homology exon 27069 27416 . + . gene_id "nbis-gene-25"; transcript_id "gene-C7A06_RS00130"; Dbxref "Genbank:WP_000703959.1"; ID "nbis-exon-26"; Name "WP_000703959.1"; Parent "gene-C7A06_RS00130"; gbkey "CDS"; gene "yidH"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312644.1"; locus_tag "C7A06_RS00130"; product "YidH family protein"; protein_id "WP_000703959.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
485 NZ_CP027599.1 Protein Homology CDS 27069 27416 . + 0 gene_id "nbis-gene-25"; transcript_id "gene-C7A06_RS00130"; Dbxref "Genbank:WP_000703959.1"; ID "cds-WP_000703959.1"; Name "WP_000703959.1"; Parent "gene-C7A06_RS00130"; gbkey "CDS"; gene "yidH"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312644.1"; locus_tag "C7A06_RS00130"; product "YidH family protein"; protein_id "WP_000703959.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
486 NZ_CP027599.1 RefSeq gene 27406 27768 . + . gene_id "nbis-gene-26"; ID "nbis-gene-26"; Name "yidG"; gbkey "Gene"; gene "yidG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00135";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
487 NZ_CP027599.1 RefSeq transcript 27406 27768 . + . gene_id "nbis-gene-26"; transcript_id "gene-C7A06_RS00135"; ID "gene-C7A06_RS00135"; Name "yidG"; Parent "nbis-gene-26"; gbkey "Gene"; gene "yidG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00135"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
488 NZ_CP027599.1 Protein Homology exon 27406 27768 . + . gene_id "nbis-gene-26"; transcript_id "gene-C7A06_RS00135"; Dbxref "Genbank:WP_001113432.1"; ID "nbis-exon-27"; Name "WP_001113432.1"; Parent "gene-C7A06_RS00135"; gbkey "CDS"; gene "yidG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312643.1"; locus_tag "C7A06_RS00135"; product "DUF202 domain-containing protein"; protein_id "WP_001113432.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
489 NZ_CP027599.1 Protein Homology CDS 27406 27768 . + 0 gene_id "nbis-gene-26"; transcript_id "gene-C7A06_RS00135"; Dbxref "Genbank:WP_001113432.1"; ID "cds-WP_001113432.1"; Name "WP_001113432.1"; Parent "gene-C7A06_RS00135"; gbkey "CDS"; gene "yidG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312643.1"; locus_tag "C7A06_RS00135"; product "DUF202 domain-containing protein"; protein_id "WP_001113432.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
490 NZ_CP027599.1 RefSeq gene 27765 28262 . + . gene_id "nbis-gene-27"; ID "nbis-gene-27"; Name "yidF"; gbkey "Gene"; gene "yidF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00140";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
491 NZ_CP027599.1 RefSeq transcript 27765 28262 . + . gene_id "nbis-gene-27"; transcript_id "gene-C7A06_RS00140"; ID "gene-C7A06_RS00140"; Name "yidF"; Parent "nbis-gene-27"; gbkey "Gene"; gene "yidF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00140"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
492 NZ_CP027599.1 Protein Homology exon 27765 28262 . + . gene_id "nbis-gene-27"; transcript_id "gene-C7A06_RS00140"; Dbxref "Genbank:WP_000148063.1"; ID "nbis-exon-28"; Name "WP_000148063.1"; Parent "gene-C7A06_RS00140"; gbkey "CDS"; gene "yidF"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709521.1"; locus_tag "C7A06_RS00140"; product "radical SAM protein"; protein_id "WP_000148063.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
493 NZ_CP027599.1 Protein Homology CDS 27765 28262 . + 0 gene_id "nbis-gene-27"; transcript_id "gene-C7A06_RS00140"; Dbxref "Genbank:WP_000148063.1"; ID "cds-WP_000148063.1"; Name "WP_000148063.1"; Parent "gene-C7A06_RS00140"; gbkey "CDS"; gene "yidF"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709521.1"; locus_tag "C7A06_RS00140"; product "radical SAM protein"; protein_id "WP_000148063.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
494 NZ_CP027599.1 RefSeq gene 28270 29454 . - . gene_id "nbis-gene-28"; ID "nbis-gene-28"; Name "emrD"; gbkey "Gene"; gene "emrD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00145";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
495 NZ_CP027599.1 RefSeq transcript 28270 29454 . - . gene_id "nbis-gene-28"; transcript_id "gene-C7A06_RS00145"; ID "gene-C7A06_RS00145"; Name "emrD"; Parent "nbis-gene-28"; gbkey "Gene"; gene "emrD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00145"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
496 NZ_CP027599.1 Protein Homology exon 28270 29454 . - . gene_id "nbis-gene-28"; transcript_id "gene-C7A06_RS00145"; Dbxref "Genbank:WP_000828746.1"; ID "nbis-exon-29"; Name "WP_000828746.1"; Parent "gene-C7A06_RS00145"; gbkey "CDS"; gene "emrD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418129.2"; locus_tag "C7A06_RS00145"; product "multidrug efflux MFS transporter EmrD"; protein_id "WP_000828746.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
497 NZ_CP027599.1 Protein Homology CDS 28270 29454 . - 0 gene_id "nbis-gene-28"; transcript_id "gene-C7A06_RS00145"; Dbxref "Genbank:WP_000828746.1"; ID "cds-WP_000828746.1"; Name "WP_000828746.1"; Parent "gene-C7A06_RS00145"; gbkey "CDS"; gene "emrD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418129.2"; locus_tag "C7A06_RS00145"; product "multidrug efflux MFS transporter EmrD"; protein_id "WP_000828746.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
498 NZ_CP027599.1 RefSeq gene 29536 29610 . + . gene_id "nbis-gene-5807"; ID "nbis-gene-5807"; Name "ysdE"; gbkey "Gene"; gene "ysdE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS34670";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
499 NZ_CP027599.1 RefSeq transcript 29536 29610 . + . gene_id "nbis-gene-5807"; transcript_id "gene-C7A06_RS34670"; ID "gene-C7A06_RS34670"; Name "ysdE"; Parent "nbis-gene-5807"; gbkey "Gene"; gene "ysdE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS34670"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
500 NZ_CP027599.1 Protein Homology exon 29536 29610 . + . gene_id "nbis-gene-5807"; transcript_id "gene-C7A06_RS34670"; Dbxref "Genbank:WP_211180519.1"; ID "nbis-exon-6116"; Name "WP_211180519.1"; Parent "gene-C7A06_RS34670"; gbkey "CDS"; gene "ysdE"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_010051212.1"; locus_tag "C7A06_RS34670"; product "protein YsdE"; protein_id "WP_211180519.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
501 NZ_CP027599.1 Protein Homology CDS 29536 29610 . + 0 gene_id "nbis-gene-5807"; transcript_id "gene-C7A06_RS34670"; Dbxref "Genbank:WP_211180519.1"; ID "cds-WP_211180519.1"; Name "WP_211180519.1"; Parent "gene-C7A06_RS34670"; gbkey "CDS"; gene "ysdE"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_010051212.1"; locus_tag "C7A06_RS34670"; product "protein YsdE"; protein_id "WP_211180519.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
502 NZ_CP027599.1 RefSeq gene 29873 29962 . - . gene_id "nbis-gene-29"; ID "nbis-gene-29"; Name "tisB"; gbkey "Gene"; gene "tisB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00155";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
503 NZ_CP027599.1 RefSeq transcript 29873 29962 . - . gene_id "nbis-gene-29"; transcript_id "gene-C7A06_RS00155"; ID "gene-C7A06_RS00155"; Name "tisB"; Parent "nbis-gene-29"; gbkey "Gene"; gene "tisB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00155"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
504 NZ_CP027599.1 Protein Homology exon 29873 29962 . - . gene_id "nbis-gene-29"; transcript_id "gene-C7A06_RS00155"; Dbxref "Genbank:WP_000060506.1"; ID "nbis-exon-30"; Name "WP_000060506.1"; Parent "gene-C7A06_RS00155"; gbkey "CDS"; gene "tisB"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_009502662.1"; locus_tag "C7A06_RS00155"; product "type I toxin-antitoxin system toxin TisB"; protein_id "WP_000060506.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
505 NZ_CP027599.1 Protein Homology CDS 29873 29962 . - 0 gene_id "nbis-gene-29"; transcript_id "gene-C7A06_RS00155"; Dbxref "Genbank:WP_000060506.1"; ID "cds-WP_000060506.1"; Name "WP_000060506.1"; Parent "gene-C7A06_RS00155"; gbkey "CDS"; gene "tisB"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_009502662.1"; locus_tag "C7A06_RS00155"; product "type I toxin-antitoxin system toxin TisB"; protein_id "WP_000060506.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
506 NZ_CP027599.1 RefSeq gene 30527 30625 . + . gene_id "nbis-gene-30"; ID "nbis-gene-30"; Name "ivbL"; gbkey "Gene"; gene "ivbL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00175";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
507 NZ_CP027599.1 RefSeq transcript 30527 30625 . + . gene_id "nbis-gene-30"; transcript_id "gene-C7A06_RS00175"; ID "gene-C7A06_RS00175"; Name "ivbL"; Parent "nbis-gene-30"; gbkey "Gene"; gene "ivbL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00175"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
508 NZ_CP027599.1 Protein Homology exon 30527 30625 . + . gene_id "nbis-gene-30"; transcript_id "gene-C7A06_RS00175"; Dbxref "Genbank:WP_001315912.1"; ID "nbis-exon-31"; Name "WP_001315912.1"; Parent "gene-C7A06_RS00175"; gbkey "CDS"; gene "ivbL"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418128.1"; locus_tag "C7A06_RS00175"; product "ilvB operon leader peptide IvbL"; protein_id "WP_001315912.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
509 NZ_CP027599.1 Protein Homology CDS 30527 30625 . + 0 gene_id "nbis-gene-30"; transcript_id "gene-C7A06_RS00175"; Dbxref "Genbank:WP_001315912.1"; ID "cds-WP_001315912.1"; Name "WP_001315912.1"; Parent "gene-C7A06_RS00175"; gbkey "CDS"; gene "ivbL"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418128.1"; locus_tag "C7A06_RS00175"; product "ilvB operon leader peptide IvbL"; protein_id "WP_001315912.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
510 NZ_CP027599.1 RefSeq gene 30731 32419 . + . gene_id "nbis-gene-31"; ID "nbis-gene-31"; Name "ilvB"; gbkey "Gene"; gene "ilvB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00180";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
511 NZ_CP027599.1 RefSeq transcript 30731 32419 . + . gene_id "nbis-gene-31"; transcript_id "gene-C7A06_RS00180"; ID "gene-C7A06_RS00180"; Name "ilvB"; Parent "nbis-gene-31"; gbkey "Gene"; gene "ilvB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00180"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
512 NZ_CP027599.1 Protein Homology exon 30731 32419 . + . gene_id "nbis-gene-31"; transcript_id "gene-C7A06_RS00180"; Dbxref "Genbank:WP_000168497.1"; ID "nbis-exon-32"; Name "WP_000168497.1"; Ontology_term "GO:0009082" "GO:0000287" "GO:0003984" "GO:0030976" "GO:0050660"; Parent "gene-C7A06_RS00180"; gbkey "CDS"; gene "ilvB"; go_function "magnesium ion binding|0000287||IEA" "acetolactate synthase activity|0003984||IEA" "thiamine pyrophosphate binding|0030976||IEA" "flavin adenine dinucleotide binding|0050660||IEA"; go_process "branched-chain amino acid biosynthetic process|0009082||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418127.1"; locus_tag "C7A06_RS00180"; product "acetolactate synthase large subunit"; protein_id "WP_000168497.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
513 NZ_CP027599.1 Protein Homology CDS 30731 32419 . + 0 gene_id "nbis-gene-31"; transcript_id "gene-C7A06_RS00180"; Dbxref "Genbank:WP_000168497.1"; ID "cds-WP_000168497.1"; Name "WP_000168497.1"; Ontology_term "GO:0009082" "GO:0000287" "GO:0003984" "GO:0030976" "GO:0050660"; Parent "gene-C7A06_RS00180"; gbkey "CDS"; gene "ilvB"; go_function "magnesium ion binding|0000287||IEA" "acetolactate synthase activity|0003984||IEA" "thiamine pyrophosphate binding|0030976||IEA" "flavin adenine dinucleotide binding|0050660||IEA"; go_process "branched-chain amino acid biosynthetic process|0009082||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418127.1"; locus_tag "C7A06_RS00180"; product "acetolactate synthase large subunit"; protein_id "WP_000168497.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
514 NZ_CP027599.1 RefSeq gene 32423 32713 . + . gene_id "nbis-gene-32"; ID "nbis-gene-32"; Name "ilvN"; gbkey "Gene"; gene "ilvN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00185";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
515 NZ_CP027599.1 RefSeq transcript 32423 32713 . + . gene_id "nbis-gene-32"; transcript_id "gene-C7A06_RS00185"; ID "gene-C7A06_RS00185"; Name "ilvN"; Parent "nbis-gene-32"; gbkey "Gene"; gene "ilvN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00185"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
516 NZ_CP027599.1 Protein Homology exon 32423 32713 . + . gene_id "nbis-gene-32"; transcript_id "gene-C7A06_RS00185"; Dbxref "Genbank:WP_001181706.1"; ID "nbis-exon-33"; Name "WP_001181706.1"; Parent "gene-C7A06_RS00185"; gbkey "CDS"; gene "ilvN"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312638.1"; locus_tag "C7A06_RS00185"; product "acetolactate synthase small subunit"; protein_id "WP_001181706.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
517 NZ_CP027599.1 Protein Homology CDS 32423 32713 . + 0 gene_id "nbis-gene-32"; transcript_id "gene-C7A06_RS00185"; Dbxref "Genbank:WP_001181706.1"; ID "cds-WP_001181706.1"; Name "WP_001181706.1"; Parent "gene-C7A06_RS00185"; gbkey "CDS"; gene "ilvN"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312638.1"; locus_tag "C7A06_RS00185"; product "acetolactate synthase small subunit"; protein_id "WP_001181706.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
518 NZ_CP027599.1 RefSeq gene 32788 33378 . + . gene_id "nbis-gene-33"; ID "nbis-gene-33"; Name "uhpA"; gbkey "Gene"; gene "uhpA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00190";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
519 NZ_CP027599.1 RefSeq transcript 32788 33378 . + . gene_id "nbis-gene-33"; transcript_id "gene-C7A06_RS00190"; ID "gene-C7A06_RS00190"; Name "uhpA"; Parent "nbis-gene-33"; gbkey "Gene"; gene "uhpA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00190"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
520 NZ_CP027599.1 Protein Homology exon 32788 33378 . + . gene_id "nbis-gene-33"; transcript_id "gene-C7A06_RS00190"; Dbxref "Genbank:WP_000633668.1"; ID "nbis-exon-34"; Name "WP_000633668.1"; Ontology_term "GO:0006355" "GO:0003677"; Parent "gene-C7A06_RS00190"; gbkey "CDS"; gene "uhpA"; go_function "DNA binding|0003677||IEA"; go_process "regulation of transcription, DNA-templated|0006355||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312633.1"; locus_tag "C7A06_RS00190"; product "transcriptional regulator UhpA"; protein_id "WP_000633668.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
521 NZ_CP027599.1 Protein Homology CDS 32788 33378 . + 0 gene_id "nbis-gene-33"; transcript_id "gene-C7A06_RS00190"; Dbxref "Genbank:WP_000633668.1"; ID "cds-WP_000633668.1"; Name "WP_000633668.1"; Ontology_term "GO:0006355" "GO:0003677"; Parent "gene-C7A06_RS00190"; gbkey "CDS"; gene "uhpA"; go_function "DNA binding|0003677||IEA"; go_process "regulation of transcription, DNA-templated|0006355||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312633.1"; locus_tag "C7A06_RS00190"; product "transcriptional regulator UhpA"; protein_id "WP_000633668.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
522 NZ_CP027599.1 RefSeq gene 33378 34880 . + . gene_id "nbis-gene-34"; ID "nbis-gene-34"; Name "uhpB"; gbkey "Gene"; gene "uhpB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00195";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
523 NZ_CP027599.1 RefSeq transcript 33378 34880 . + . gene_id "nbis-gene-34"; transcript_id "gene-C7A06_RS00195"; ID "gene-C7A06_RS00195"; Name "uhpB"; Parent "nbis-gene-34"; gbkey "Gene"; gene "uhpB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00195"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
524 NZ_CP027599.1 Protein Homology exon 33378 34880 . + . gene_id "nbis-gene-34"; transcript_id "gene-C7A06_RS00195"; Dbxref "Genbank:WP_001295243.1"; ID "nbis-exon-35"; Name "WP_001295243.1"; Ontology_term "GO:0000160" "GO:0000155"; Parent "gene-C7A06_RS00195"; gbkey "CDS"; gene "uhpB"; go_function "phosphorelay sensor kinase activity|0000155||IEA"; go_process "phosphorelay signal transduction system|0000160||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418124.4"; locus_tag "C7A06_RS00195"; product "signal transduction histidine-protein kinase/phosphatase UhpB"; protein_id "WP_001295243.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
525 NZ_CP027599.1 Protein Homology CDS 33378 34880 . + 0 gene_id "nbis-gene-34"; transcript_id "gene-C7A06_RS00195"; Dbxref "Genbank:WP_001295243.1"; ID "cds-WP_001295243.1"; Name "WP_001295243.1"; Ontology_term "GO:0000160" "GO:0000155"; Parent "gene-C7A06_RS00195"; gbkey "CDS"; gene "uhpB"; go_function "phosphorelay sensor kinase activity|0000155||IEA"; go_process "phosphorelay signal transduction system|0000160||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418124.4"; locus_tag "C7A06_RS00195"; product "signal transduction histidine-protein kinase/phosphatase UhpB"; protein_id "WP_001295243.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
526 NZ_CP027599.1 RefSeq gene 34890 36209 . + . gene_id "nbis-gene-35"; ID "nbis-gene-35"; Name "uhpC"; gbkey "Gene"; gene "uhpC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00200";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
527 NZ_CP027599.1 RefSeq transcript 34890 36209 . + . gene_id "nbis-gene-35"; transcript_id "gene-C7A06_RS00200"; ID "gene-C7A06_RS00200"; Name "uhpC"; Parent "nbis-gene-35"; gbkey "Gene"; gene "uhpC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00200"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
528 NZ_CP027599.1 Protein Homology exon 34890 36209 . + . gene_id "nbis-gene-35"; transcript_id "gene-C7A06_RS00200"; Dbxref "Genbank:WP_001341770.1"; ID "nbis-exon-36"; Name "WP_001341770.1"; Parent "gene-C7A06_RS00200"; gbkey "CDS"; gene "uhpC"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709527.2"; locus_tag "C7A06_RS00200"; product "MFS transporter family glucose-6-phosphate receptor UhpC"; protein_id "WP_001341770.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
529 NZ_CP027599.1 Protein Homology CDS 34890 36209 . + 0 gene_id "nbis-gene-35"; transcript_id "gene-C7A06_RS00200"; Dbxref "Genbank:WP_001341770.1"; ID "cds-WP_001341770.1"; Name "WP_001341770.1"; Parent "gene-C7A06_RS00200"; gbkey "CDS"; gene "uhpC"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709527.2"; locus_tag "C7A06_RS00200"; product "MFS transporter family glucose-6-phosphate receptor UhpC"; protein_id "WP_001341770.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
530 NZ_CP027599.1 RefSeq gene 36465 37856 . + . gene_id "nbis-gene-36"; ID "nbis-gene-36"; Name "uhpT"; gbkey "Gene"; gene "uhpT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00205";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
531 NZ_CP027599.1 RefSeq transcript 36465 37856 . + . gene_id "nbis-gene-36"; transcript_id "gene-C7A06_RS00205"; ID "gene-C7A06_RS00205"; Name "uhpT"; Parent "nbis-gene-36"; gbkey "Gene"; gene "uhpT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00205"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
532 NZ_CP027599.1 Protein Homology exon 36465 37856 . + . gene_id "nbis-gene-36"; transcript_id "gene-C7A06_RS00205"; Dbxref "Genbank:WP_000879194.1"; ID "nbis-exon-37"; Name "WP_000879194.1"; Ontology_term "GO:0055085" "GO:0022857"; Parent "gene-C7A06_RS00205"; gbkey "CDS"; gene "uhpT"; go_function "transmembrane transporter activity|0022857||IEA"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312630.1"; locus_tag "C7A06_RS00205"; product "hexose-6-phosphate:phosphate antiporter"; protein_id "WP_000879194.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
533 NZ_CP027599.1 Protein Homology CDS 36465 37856 . + 0 gene_id "nbis-gene-36"; transcript_id "gene-C7A06_RS00205"; Dbxref "Genbank:WP_000879194.1"; ID "cds-WP_000879194.1"; Name "WP_000879194.1"; Ontology_term "GO:0055085" "GO:0022857"; Parent "gene-C7A06_RS00205"; gbkey "CDS"; gene "uhpT"; go_function "transmembrane transporter activity|0022857||IEA"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312630.1"; locus_tag "C7A06_RS00205"; product "hexose-6-phosphate:phosphate antiporter"; protein_id "WP_000879194.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
534 NZ_CP027599.1 RefSeq gene 37901 39667 . - . gene_id "nbis-gene-37"; ID "nbis-gene-37"; Name "adeD"; gbkey "Gene"; gene "adeD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00210";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
535 NZ_CP027599.1 RefSeq transcript 37901 39667 . - . gene_id "nbis-gene-37"; transcript_id "gene-C7A06_RS00210"; ID "gene-C7A06_RS00210"; Name "adeD"; Parent "nbis-gene-37"; gbkey "Gene"; gene "adeD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00210"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
536 NZ_CP027599.1 Protein Homology exon 37901 39667 . - . gene_id "nbis-gene-37"; transcript_id "gene-C7A06_RS00210"; Dbxref "Genbank:WP_001065695.1"; ID "nbis-exon-38"; Name "WP_001065695.1"; Parent "gene-C7A06_RS00210"; gbkey "CDS"; gene "adeD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418121.1"; locus_tag "C7A06_RS00210"; product "adenine deaminase"; protein_id "WP_001065695.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
537 NZ_CP027599.1 Protein Homology CDS 37901 39667 . - 0 gene_id "nbis-gene-37"; transcript_id "gene-C7A06_RS00210"; Dbxref "Genbank:WP_001065695.1"; ID "cds-WP_001065695.1"; Name "WP_001065695.1"; Parent "gene-C7A06_RS00210"; gbkey "CDS"; gene "adeD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418121.1"; locus_tag "C7A06_RS00210"; product "adenine deaminase"; protein_id "WP_001065695.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
538 NZ_CP027599.1 RefSeq gene 39842 41176 . + . gene_id "nbis-gene-38"; ID "nbis-gene-38"; Name "adeQ"; gbkey "Gene"; gene "adeQ"; gene_biotype "protein_coding"; gene_synonym "yicO"; locus_tag "C7A06_RS00215";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
539 NZ_CP027599.1 RefSeq transcript 39842 41176 . + . gene_id "nbis-gene-38"; transcript_id "gene-C7A06_RS00215"; ID "gene-C7A06_RS00215"; Name "adeQ"; Parent "nbis-gene-38"; gbkey "Gene"; gene "adeQ"; gene_biotype "protein_coding"; gene_synonym "yicO"; locus_tag "C7A06_RS00215"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
540 NZ_CP027599.1 Protein Homology exon 39842 41176 . + . gene_id "nbis-gene-38"; transcript_id "gene-C7A06_RS00215"; Dbxref "Genbank:WP_001349999.1"; ID "nbis-exon-39"; Name "WP_001349999.1"; Parent "gene-C7A06_RS00215"; gbkey "CDS"; gene "adeQ"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418120.2"; locus_tag "C7A06_RS00215"; product "adenine permease AdeQ"; protein_id "WP_001349999.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
541 NZ_CP027599.1 Protein Homology CDS 39842 41176 . + 0 gene_id "nbis-gene-38"; transcript_id "gene-C7A06_RS00215"; Dbxref "Genbank:WP_001349999.1"; ID "cds-WP_001349999.1"; Name "WP_001349999.1"; Parent "gene-C7A06_RS00215"; gbkey "CDS"; gene "adeQ"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418120.2"; locus_tag "C7A06_RS00215"; product "adenine permease AdeQ"; protein_id "WP_001349999.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
542 NZ_CP027599.1 RefSeq gene 41229 41681 . + . gene_id "nbis-gene-39"; ID "nbis-gene-39"; Name "yicN"; gbkey "Gene"; gene "yicN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00220";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
543 NZ_CP027599.1 RefSeq transcript 41229 41681 . + . gene_id "nbis-gene-39"; transcript_id "gene-C7A06_RS00220"; ID "gene-C7A06_RS00220"; Name "yicN"; Parent "nbis-gene-39"; gbkey "Gene"; gene "yicN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00220"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
544 NZ_CP027599.1 Protein Homology exon 41229 41681 . + . gene_id "nbis-gene-39"; transcript_id "gene-C7A06_RS00220"; Dbxref "Genbank:WP_001295241.1"; ID "nbis-exon-40"; Name "WP_001295241.1"; Parent "gene-C7A06_RS00220"; gbkey "CDS"; gene "yicN"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418119.2"; locus_tag "C7A06_RS00220"; product "DUF1198 domain-containing protein"; protein_id "WP_001295241.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
545 NZ_CP027599.1 Protein Homology CDS 41229 41681 . + 0 gene_id "nbis-gene-39"; transcript_id "gene-C7A06_RS00220"; Dbxref "Genbank:WP_001295241.1"; ID "cds-WP_001295241.1"; Name "WP_001295241.1"; Parent "gene-C7A06_RS00220"; gbkey "CDS"; gene "yicN"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418119.2"; locus_tag "C7A06_RS00220"; product "DUF1198 domain-containing protein"; protein_id "WP_001295241.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
546 NZ_CP027599.1 RefSeq gene 41892 43082 . + . gene_id "nbis-gene-40"; ID "nbis-gene-40"; Name "nepI"; gbkey "Gene"; gene "nepI"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00230";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
547 NZ_CP027599.1 RefSeq transcript 41892 43082 . + . gene_id "nbis-gene-40"; transcript_id "gene-C7A06_RS00230"; ID "gene-C7A06_RS00230"; Name "nepI"; Parent "nbis-gene-40"; gbkey "Gene"; gene "nepI"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00230"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
548 NZ_CP027599.1 Protein Homology exon 41892 43082 . + . gene_id "nbis-gene-40"; transcript_id "gene-C7A06_RS00230"; Dbxref "Genbank:WP_001288553.1"; ID "nbis-exon-41"; Name "WP_001288553.1"; Ontology_term "GO:0015860" "GO:0015211" "GO:0016021"; Parent "gene-C7A06_RS00230"; gbkey "CDS"; gene "nepI"; go_component "integral component of membrane|0016021||IEA"; go_function "purine nucleoside transmembrane transporter activity|0015211||IEA"; go_process "purine nucleoside transmembrane transport|0015860||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418118.2"; locus_tag "C7A06_RS00230"; product "purine ribonucleoside efflux pump NepI"; protein_id "WP_001288553.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
549 NZ_CP027599.1 Protein Homology CDS 41892 43082 . + 0 gene_id "nbis-gene-40"; transcript_id "gene-C7A06_RS00230"; Dbxref "Genbank:WP_001288553.1"; ID "cds-WP_001288553.1"; Name "WP_001288553.1"; Ontology_term "GO:0015860" "GO:0015211" "GO:0016021"; Parent "gene-C7A06_RS00230"; gbkey "CDS"; gene "nepI"; go_component "integral component of membrane|0016021||IEA"; go_function "purine nucleoside transmembrane transporter activity|0015211||IEA"; go_process "purine nucleoside transmembrane transport|0015860||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418118.2"; locus_tag "C7A06_RS00230"; product "purine ribonucleoside efflux pump NepI"; protein_id "WP_001288553.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
550 NZ_CP027599.1 RefSeq gene 43123 43416 . - . gene_id "nbis-gene-41"; ID "nbis-gene-41"; Name "C7A06_RS00235"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00235";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
551 NZ_CP027599.1 RefSeq transcript 43123 43416 . - . gene_id "nbis-gene-41"; transcript_id "gene-C7A06_RS00235"; ID "gene-C7A06_RS00235"; Name "C7A06_RS00235"; Parent "nbis-gene-41"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00235"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
552 NZ_CP027599.1 Protein Homology exon 43123 43416 . - . gene_id "nbis-gene-41"; transcript_id "gene-C7A06_RS00235"; Dbxref "Genbank:WP_000805507.1"; ID "nbis-exon-42"; Name "WP_000805507.1"; Parent "gene-C7A06_RS00235"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_588471.1"; locus_tag "C7A06_RS00235"; product "hypothetical protein"; protein_id "WP_000805507.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
553 NZ_CP027599.1 Protein Homology CDS 43123 43416 . - 0 gene_id "nbis-gene-41"; transcript_id "gene-C7A06_RS00235"; Dbxref "Genbank:WP_000805507.1"; ID "cds-WP_000805507.1"; Name "WP_000805507.1"; Parent "gene-C7A06_RS00235"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_588471.1"; locus_tag "C7A06_RS00235"; product "hypothetical protein"; protein_id "WP_000805507.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
554 NZ_CP027599.1 RefSeq gene 43638 44456 . + . gene_id "nbis-gene-42"; ID "nbis-gene-42"; Name "nlpA"; gbkey "Gene"; gene "nlpA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00245";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
555 NZ_CP027599.1 RefSeq transcript 43638 44456 . + . gene_id "nbis-gene-42"; transcript_id "gene-C7A06_RS00245"; ID "gene-C7A06_RS00245"; Name "nlpA"; Parent "nbis-gene-42"; gbkey "Gene"; gene "nlpA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00245"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
556 NZ_CP027599.1 Protein Homology exon 43638 44456 . + . gene_id "nbis-gene-42"; transcript_id "gene-C7A06_RS00245"; Dbxref "Genbank:WP_000779426.1"; ID "nbis-exon-43"; Name "WP_000779426.1"; Parent "gene-C7A06_RS00245"; gbkey "CDS"; gene "nlpA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418117.1"; locus_tag "C7A06_RS00245"; product "lipoprotein NlpA"; protein_id "WP_000779426.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
557 NZ_CP027599.1 Protein Homology CDS 43638 44456 . + 0 gene_id "nbis-gene-42"; transcript_id "gene-C7A06_RS00245"; Dbxref "Genbank:WP_000779426.1"; ID "cds-WP_000779426.1"; Name "WP_000779426.1"; Parent "gene-C7A06_RS00245"; gbkey "CDS"; gene "nlpA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418117.1"; locus_tag "C7A06_RS00245"; product "lipoprotein NlpA"; protein_id "WP_000779426.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
558 NZ_CP027599.1 RefSeq gene 44460 45383 . - . gene_id "nbis-gene-43"; ID "nbis-gene-43"; Name "yicL"; gbkey "Gene"; gene "yicL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00250";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
559 NZ_CP027599.1 RefSeq transcript 44460 45383 . - . gene_id "nbis-gene-43"; transcript_id "gene-C7A06_RS00250"; ID "gene-C7A06_RS00250"; Name "yicL"; Parent "nbis-gene-43"; gbkey "Gene"; gene "yicL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00250"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
560 NZ_CP027599.1 Protein Homology exon 44460 45383 . - . gene_id "nbis-gene-43"; transcript_id "gene-C7A06_RS00250"; Dbxref "Genbank:WP_000535958.1"; ID "nbis-exon-44"; Name "WP_000535958.1"; Ontology_term "GO:0016021"; Parent "gene-C7A06_RS00250"; gbkey "CDS"; gene "yicL"; go_component "integral component of membrane|0016021||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418116.1"; locus_tag "C7A06_RS00250"; product "carboxylate/amino acid/amine transporter"; protein_id "WP_000535958.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
561 NZ_CP027599.1 Protein Homology CDS 44460 45383 . - 0 gene_id "nbis-gene-43"; transcript_id "gene-C7A06_RS00250"; Dbxref "Genbank:WP_000535958.1"; ID "cds-WP_000535958.1"; Name "WP_000535958.1"; Ontology_term "GO:0016021"; Parent "gene-C7A06_RS00250"; gbkey "CDS"; gene "yicL"; go_component "integral component of membrane|0016021||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418116.1"; locus_tag "C7A06_RS00250"; product "carboxylate/amino acid/amine transporter"; protein_id "WP_000535958.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
562 NZ_CP027599.1 RefSeq gene 45494 46678 . - . gene_id "nbis-gene-44"; ID "nbis-gene-44"; Name "setC"; gbkey "Gene"; gene "setC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00255";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
563 NZ_CP027599.1 RefSeq transcript 45494 46678 . - . gene_id "nbis-gene-44"; transcript_id "gene-C7A06_RS00255"; ID "gene-C7A06_RS00255"; Name "setC"; Parent "nbis-gene-44"; gbkey "Gene"; gene "setC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00255"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
564 NZ_CP027599.1 Protein Homology exon 45494 46678 . - . gene_id "nbis-gene-44"; transcript_id "gene-C7A06_RS00255"; Dbxref "Genbank:WP_001172895.1"; ID "nbis-exon-45"; Name "WP_001172895.1"; Ontology_term "GO:0008643" "GO:0005351"; Parent "gene-C7A06_RS00255"; gbkey "CDS"; gene "setC"; go_function "carbohydrate:proton symporter activity|0005351||IEA"; go_process "carbohydrate transport|0008643||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418115.1"; locus_tag "C7A06_RS00255"; product "sugar efflux transporter"; protein_id "WP_001172895.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
565 NZ_CP027599.1 Protein Homology CDS 45494 46678 . - 0 gene_id "nbis-gene-44"; transcript_id "gene-C7A06_RS00255"; Dbxref "Genbank:WP_001172895.1"; ID "cds-WP_001172895.1"; Name "WP_001172895.1"; Ontology_term "GO:0008643" "GO:0005351"; Parent "gene-C7A06_RS00255"; gbkey "CDS"; gene "setC"; go_function "carbohydrate:proton symporter activity|0005351||IEA"; go_process "carbohydrate transport|0008643||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418115.1"; locus_tag "C7A06_RS00255"; product "sugar efflux transporter"; protein_id "WP_001172895.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
566 NZ_CP027599.1 RefSeq gene 47107 47235 . - . gene_id "nbis-pseudogene-2"; ID "nbis-pseudogene-2"; Name "C7A06_RS00260"; end_range "47235" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS00260"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "47107";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
567 NZ_CP027599.1 RefSeq transcript 47107 47235 . - . gene_id "nbis-pseudogene-2"; transcript_id "gene-C7A06_RS00260"; ID "gene-C7A06_RS00260"; Name "C7A06_RS00260"; Parent "nbis-pseudogene-2"; end_range "47235" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS00260"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "47107";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
568 NZ_CP027599.1 Protein Homology exon 47107 47235 . - . gene_id "nbis-pseudogene-2"; transcript_id "gene-C7A06_RS00260"; ID "nbis-exon-46"; Note "internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus"; Parent "gene-C7A06_RS00260"; end_range "47235" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_462654.1"; locus_tag "C7A06_RS00260"; partial "true"; product "virulence RhuM family protein"; pseudo "true"; start_range "." "47107"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
569 NZ_CP027599.1 Protein Homology CDS 47107 47235 . - 0 gene_id "nbis-pseudogene-2"; transcript_id "gene-C7A06_RS00260"; ID "cds-C7A06_RS00260"; Note "internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus"; Parent "gene-C7A06_RS00260"; end_range "47235" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_462654.1"; locus_tag "C7A06_RS00260"; partial "true"; product "virulence RhuM family protein"; pseudo "true"; start_range "." "47107"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
570 NZ_CP027599.1 RefSeq gene 47473 48315 . - . gene_id "nbis-gene-45"; ID "nbis-gene-45"; Name "C7A06_RS00270"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00270";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
571 NZ_CP027599.1 RefSeq transcript 47473 48315 . - . gene_id "nbis-gene-45"; transcript_id "gene-C7A06_RS00270"; ID "gene-C7A06_RS00270"; Name "C7A06_RS00270"; Parent "nbis-gene-45"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00270"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
572 NZ_CP027599.1 Protein Homology exon 47473 48315 . - . gene_id "nbis-gene-45"; transcript_id "gene-C7A06_RS00270"; Dbxref "Genbank:WP_032348719.1"; ID "nbis-exon-47"; Name "WP_032348719.1"; Parent "gene-C7A06_RS00270"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001696593.1"; locus_tag "C7A06_RS00270"; product "DUF4942 domain-containing protein"; protein_id "WP_032348719.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
573 NZ_CP027599.1 Protein Homology CDS 47473 48315 . - 0 gene_id "nbis-gene-45"; transcript_id "gene-C7A06_RS00270"; Dbxref "Genbank:WP_032348719.1"; ID "cds-WP_032348719.1"; Name "WP_032348719.1"; Parent "gene-C7A06_RS00270"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001696593.1"; locus_tag "C7A06_RS00270"; product "DUF4942 domain-containing protein"; protein_id "WP_032348719.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
574 NZ_CP027599.1 RefSeq gene 48400 48597 . - . gene_id "nbis-gene-46"; ID "nbis-gene-46"; Name "C7A06_RS00275"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00275";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
575 NZ_CP027599.1 RefSeq transcript 48400 48597 . - . gene_id "nbis-gene-46"; transcript_id "gene-C7A06_RS00275"; ID "gene-C7A06_RS00275"; Name "C7A06_RS00275"; Parent "nbis-gene-46"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00275"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
576 NZ_CP027599.1 Protein Homology exon 48400 48597 . - . gene_id "nbis-gene-46"; transcript_id "gene-C7A06_RS00275"; Dbxref "Genbank:WP_086795284.1"; ID "nbis-exon-48"; Name "WP_086795284.1"; Parent "gene-C7A06_RS00275"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_708775.1"; locus_tag "C7A06_RS00275"; product "DUF957 domain-containing protein"; protein_id "WP_086795284.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
577 NZ_CP027599.1 Protein Homology CDS 48400 48597 . - 0 gene_id "nbis-gene-46"; transcript_id "gene-C7A06_RS00275"; Dbxref "Genbank:WP_086795284.1"; ID "cds-WP_086795284.1"; Name "WP_086795284.1"; Parent "gene-C7A06_RS00275"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_708775.1"; locus_tag "C7A06_RS00275"; product "DUF957 domain-containing protein"; protein_id "WP_086795284.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
578 NZ_CP027599.1 RefSeq gene 48673 48822 . - . gene_id "nbis-pseudogene-3"; ID "nbis-pseudogene-3"; Name "C7A06_RS00280"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS00280"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "48673";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
579 NZ_CP027599.1 RefSeq transcript 48673 48822 . - . gene_id "nbis-pseudogene-3"; transcript_id "gene-C7A06_RS00280"; ID "gene-C7A06_RS00280"; Name "C7A06_RS00280"; Parent "nbis-pseudogene-3"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS00280"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "48673";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
580 NZ_CP027599.1 Protein Homology exon 48673 48822 . - . gene_id "nbis-pseudogene-3"; transcript_id "gene-C7A06_RS00280"; ID "nbis-exon-49"; Note "incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS00280"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_708774.1"; locus_tag "C7A06_RS00280"; partial "true"; product "DUF5983 family protein"; pseudo "true"; start_range "." "48673"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
581 NZ_CP027599.1 Protein Homology CDS 48673 48822 . - 0 gene_id "nbis-pseudogene-3"; transcript_id "gene-C7A06_RS00280"; ID "cds-C7A06_RS00280"; Note "incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS00280"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_708774.1"; locus_tag "C7A06_RS00280"; partial "true"; product "DUF5983 family protein"; pseudo "true"; start_range "." "48673"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
582 NZ_CP027599.1 RefSeq gene 48819 49196 . - . gene_id "nbis-gene-47"; ID "nbis-gene-47"; Name "cbtA"; gbkey "Gene"; gene "cbtA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00285";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
583 NZ_CP027599.1 RefSeq transcript 48819 49196 . - . gene_id "nbis-gene-47"; transcript_id "gene-C7A06_RS00285"; ID "gene-C7A06_RS00285"; Name "cbtA"; Parent "nbis-gene-47"; gbkey "Gene"; gene "cbtA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00285"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
584 NZ_CP027599.1 Protein Homology exon 48819 49196 . - . gene_id "nbis-gene-47"; transcript_id "gene-C7A06_RS00285"; Dbxref "Genbank:WP_000854821.1"; ID "nbis-exon-50"; Name "WP_000854821.1"; Parent "gene-C7A06_RS00285"; gbkey "CDS"; gene "cbtA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000854828.1"; locus_tag "C7A06_RS00285"; product "type IV toxin-antitoxin system toxin CbtA"; protein_id "WP_000854821.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
585 NZ_CP027599.1 Protein Homology CDS 48819 49196 . - 0 gene_id "nbis-gene-47"; transcript_id "gene-C7A06_RS00285"; Dbxref "Genbank:WP_000854821.1"; ID "cds-WP_000854821.1"; Name "WP_000854821.1"; Parent "gene-C7A06_RS00285"; gbkey "CDS"; gene "cbtA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000854828.1"; locus_tag "C7A06_RS00285"; product "type IV toxin-antitoxin system toxin CbtA"; protein_id "WP_000854821.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
586 NZ_CP027599.1 RefSeq gene 49286 49654 . - . gene_id "nbis-gene-48"; ID "nbis-gene-48"; Name "C7A06_RS00290"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00290";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
587 NZ_CP027599.1 RefSeq transcript 49286 49654 . - . gene_id "nbis-gene-48"; transcript_id "gene-C7A06_RS00290"; ID "gene-C7A06_RS00290"; Name "C7A06_RS00290"; Parent "nbis-gene-48"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00290"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
588 NZ_CP027599.1 Protein Homology exon 49286 49654 . - . gene_id "nbis-gene-48"; transcript_id "gene-C7A06_RS00290"; Dbxref "Genbank:WP_001285609.1"; ID "nbis-exon-51"; Name "WP_001285609.1"; Parent "gene-C7A06_RS00290"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001443430.1"; locus_tag "C7A06_RS00290"; product "type IV toxin-antitoxin system YeeU family antitoxin"; protein_id "WP_001285609.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
589 NZ_CP027599.1 Protein Homology CDS 49286 49654 . - 0 gene_id "nbis-gene-48"; transcript_id "gene-C7A06_RS00290"; Dbxref "Genbank:WP_001285609.1"; ID "cds-WP_001285609.1"; Name "WP_001285609.1"; Parent "gene-C7A06_RS00290"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001443430.1"; locus_tag "C7A06_RS00290"; product "type IV toxin-antitoxin system YeeU family antitoxin"; protein_id "WP_001285609.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
590 NZ_CP027599.1 RefSeq gene 49734 49955 . - . gene_id "nbis-pseudogene-4"; ID "nbis-pseudogene-4"; Name "C7A06_RS00295"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS00295"; original_biotype "pseudogene"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
591 NZ_CP027599.1 RefSeq transcript 49734 49955 . - . gene_id "nbis-pseudogene-4"; transcript_id "gene-C7A06_RS00295"; ID "gene-C7A06_RS00295"; Name "C7A06_RS00295"; Parent "nbis-pseudogene-4"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS00295"; original_biotype "mrna"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
592 NZ_CP027599.1 Protein Homology exon 49734 49955 . - . gene_id "nbis-pseudogene-4"; transcript_id "gene-C7A06_RS00295"; ID "nbis-exon-52"; Note "internal stop"; Parent "gene-C7A06_RS00295"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_708771.1"; locus_tag "C7A06_RS00295"; product "DUF987 domain-containing protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
593 NZ_CP027599.1 Protein Homology CDS 49734 49955 . - 0 gene_id "nbis-pseudogene-4"; transcript_id "gene-C7A06_RS00295"; ID "cds-C7A06_RS00295"; Note "internal stop"; Parent "gene-C7A06_RS00295"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_708771.1"; locus_tag "C7A06_RS00295"; product "DUF987 domain-containing protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
594 NZ_CP027599.1 RefSeq gene 50042 50518 . - . gene_id "nbis-gene-49"; ID "nbis-gene-49"; Name "C7A06_RS00300"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00300";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
595 NZ_CP027599.1 RefSeq transcript 50042 50518 . - . gene_id "nbis-gene-49"; transcript_id "gene-C7A06_RS00300"; ID "gene-C7A06_RS00300"; Name "C7A06_RS00300"; Parent "nbis-gene-49"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00300"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
596 NZ_CP027599.1 Protein Homology exon 50042 50518 . - . gene_id "nbis-gene-49"; transcript_id "gene-C7A06_RS00300"; Dbxref "Genbank:WP_001186768.1"; ID "nbis-exon-53"; Name "WP_001186768.1"; Parent "gene-C7A06_RS00300"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_310830.1"; locus_tag "C7A06_RS00300"; product "RadC family protein"; protein_id "WP_001186768.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
597 NZ_CP027599.1 Protein Homology CDS 50042 50518 . - 0 gene_id "nbis-gene-49"; transcript_id "gene-C7A06_RS00300"; Dbxref "Genbank:WP_001186768.1"; ID "cds-WP_001186768.1"; Name "WP_001186768.1"; Parent "gene-C7A06_RS00300"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_310830.1"; locus_tag "C7A06_RS00300"; product "RadC family protein"; protein_id "WP_001186768.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
598 NZ_CP027599.1 RefSeq gene 50533 51012 . - . gene_id "nbis-gene-50"; ID "nbis-gene-50"; Name "C7A06_RS00305"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00305";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
599 NZ_CP027599.1 RefSeq transcript 50533 51012 . - . gene_id "nbis-gene-50"; transcript_id "gene-C7A06_RS00305"; ID "gene-C7A06_RS00305"; Name "C7A06_RS00305"; Parent "nbis-gene-50"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00305"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
600 NZ_CP027599.1 Protein Homology exon 50533 51012 . - . gene_id "nbis-gene-50"; transcript_id "gene-C7A06_RS00305"; Dbxref "Genbank:WP_000706979.1"; ID "nbis-exon-54"; Name "WP_000706979.1"; Parent "gene-C7A06_RS00305"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_708769.2"; locus_tag "C7A06_RS00305"; product "antirestriction protein"; protein_id "WP_000706979.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
601 NZ_CP027599.1 Protein Homology CDS 50533 51012 . - 0 gene_id "nbis-gene-50"; transcript_id "gene-C7A06_RS00305"; Dbxref "Genbank:WP_000706979.1"; ID "cds-WP_000706979.1"; Name "WP_000706979.1"; Parent "gene-C7A06_RS00305"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_708769.2"; locus_tag "C7A06_RS00305"; product "antirestriction protein"; protein_id "WP_000706979.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
602 NZ_CP027599.1 RefSeq gene 51112 51252 . + . gene_id "nbis-gene-5706"; ID "nbis-gene-5706"; Name "C7A06_RS33905"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33905";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
603 NZ_CP027599.1 RefSeq transcript 51112 51252 . + . gene_id "nbis-gene-5706"; transcript_id "gene-C7A06_RS33905"; ID "gene-C7A06_RS33905"; Name "C7A06_RS33905"; Parent "nbis-gene-5706"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33905"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
604 NZ_CP027599.1 Protein Homology exon 51112 51252 . + . gene_id "nbis-gene-5706"; transcript_id "gene-C7A06_RS33905"; Dbxref "Genbank:WP_000997937.1"; ID "nbis-exon-5987"; Name "WP_000997937.1"; Parent "gene-C7A06_RS33905"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000997937.1"; locus_tag "C7A06_RS33905"; product "hypothetical protein"; protein_id "WP_000997937.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
605 NZ_CP027599.1 Protein Homology CDS 51112 51252 . + 0 gene_id "nbis-gene-5706"; transcript_id "gene-C7A06_RS33905"; Dbxref "Genbank:WP_000997937.1"; ID "cds-WP_000997937.1"; Name "WP_000997937.1"; Parent "gene-C7A06_RS33905"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000997937.1"; locus_tag "C7A06_RS33905"; product "hypothetical protein"; protein_id "WP_000997937.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
606 NZ_CP027599.1 RefSeq gene 51290 52096 . - . gene_id "nbis-gene-51"; ID "nbis-gene-51"; Name "C7A06_RS00310"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00310";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
607 NZ_CP027599.1 RefSeq transcript 51290 52096 . - . gene_id "nbis-gene-51"; transcript_id "gene-C7A06_RS00310"; ID "gene-C7A06_RS00310"; Name "C7A06_RS00310"; Parent "nbis-gene-51"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00310"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
608 NZ_CP027599.1 Protein Homology exon 51290 52096 . - . gene_id "nbis-gene-51"; transcript_id "gene-C7A06_RS00310"; Dbxref "Genbank:WP_001175154.1"; ID "nbis-exon-55"; Name "WP_001175154.1"; Parent "gene-C7A06_RS00310"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_309428.1"; locus_tag "C7A06_RS00310"; product "DUF945 domain-containing protein"; protein_id "WP_001175154.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
609 NZ_CP027599.1 Protein Homology CDS 51290 52096 . - 0 gene_id "nbis-gene-51"; transcript_id "gene-C7A06_RS00310"; Dbxref "Genbank:WP_001175154.1"; ID "cds-WP_001175154.1"; Name "WP_001175154.1"; Parent "gene-C7A06_RS00310"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_309428.1"; locus_tag "C7A06_RS00310"; product "DUF945 domain-containing protein"; protein_id "WP_001175154.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
610 NZ_CP027599.1 RefSeq gene 52186 52419 . - . gene_id "nbis-gene-52"; ID "nbis-gene-52"; Name "C7A06_RS00315"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00315";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
611 NZ_CP027599.1 RefSeq transcript 52186 52419 . - . gene_id "nbis-gene-52"; transcript_id "gene-C7A06_RS00315"; ID "gene-C7A06_RS00315"; Name "C7A06_RS00315"; Parent "nbis-gene-52"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00315"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
612 NZ_CP027599.1 Protein Homology exon 52186 52419 . - . gene_id "nbis-gene-52"; transcript_id "gene-C7A06_RS00315"; Dbxref "Genbank:WP_001278287.1"; ID "nbis-exon-56"; Name "WP_001278287.1"; Parent "gene-C7A06_RS00315"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001278287.1"; locus_tag "C7A06_RS00315"; product "DUF905 family protein"; protein_id "WP_001278287.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
613 NZ_CP027599.1 Protein Homology CDS 52186 52419 . - 0 gene_id "nbis-gene-52"; transcript_id "gene-C7A06_RS00315"; Dbxref "Genbank:WP_001278287.1"; ID "cds-WP_001278287.1"; Name "WP_001278287.1"; Parent "gene-C7A06_RS00315"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001278287.1"; locus_tag "C7A06_RS00315"; product "DUF905 family protein"; protein_id "WP_001278287.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
614 NZ_CP027599.1 RefSeq gene 52425 53102 . - . gene_id "nbis-gene-53"; ID "nbis-gene-53"; Name "C7A06_RS00320"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00320";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
615 NZ_CP027599.1 RefSeq transcript 52425 53102 . - . gene_id "nbis-gene-53"; transcript_id "gene-C7A06_RS00320"; ID "gene-C7A06_RS00320"; Name "C7A06_RS00320"; Parent "nbis-gene-53"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00320"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
616 NZ_CP027599.1 Protein Homology exon 52425 53102 . - . gene_id "nbis-gene-53"; transcript_id "gene-C7A06_RS00320"; Dbxref "Genbank:WP_001097301.1"; ID "nbis-exon-57"; Name "WP_001097301.1"; Parent "gene-C7A06_RS00320"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001097314.1"; locus_tag "C7A06_RS00320"; product "hypothetical protein"; protein_id "WP_001097301.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
617 NZ_CP027599.1 Protein Homology CDS 52425 53102 . - 0 gene_id "nbis-gene-53"; transcript_id "gene-C7A06_RS00320"; Dbxref "Genbank:WP_001097301.1"; ID "cds-WP_001097301.1"; Name "WP_001097301.1"; Parent "gene-C7A06_RS00320"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001097314.1"; locus_tag "C7A06_RS00320"; product "hypothetical protein"; protein_id "WP_001097301.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
618 NZ_CP027599.1 RefSeq gene 53250 53930 . - . gene_id "nbis-gene-54"; ID "nbis-gene-54"; Name "C7A06_RS00325"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00325";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
619 NZ_CP027599.1 RefSeq transcript 53250 53930 . - . gene_id "nbis-gene-54"; transcript_id "gene-C7A06_RS00325"; ID "gene-C7A06_RS00325"; Name "C7A06_RS00325"; Parent "nbis-gene-54"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00325"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
620 NZ_CP027599.1 Protein Homology exon 53250 53930 . - . gene_id "nbis-gene-54"; transcript_id "gene-C7A06_RS00325"; Dbxref "Genbank:WP_001282919.1"; ID "nbis-exon-58"; Name "WP_001282919.1"; Parent "gene-C7A06_RS00325"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001278649.1"; locus_tag "C7A06_RS00325"; product "WYL domain-containing protein"; protein_id "WP_001282919.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
621 NZ_CP027599.1 Protein Homology CDS 53250 53930 . - 0 gene_id "nbis-gene-54"; transcript_id "gene-C7A06_RS00325"; Dbxref "Genbank:WP_001282919.1"; ID "cds-WP_001282919.1"; Name "WP_001282919.1"; Parent "gene-C7A06_RS00325"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001278649.1"; locus_tag "C7A06_RS00325"; product "WYL domain-containing protein"; protein_id "WP_001282919.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
622 NZ_CP027599.1 RefSeq gene 54133 55017 . - . gene_id "nbis-gene-55"; ID "nbis-gene-55"; Name "C7A06_RS00330"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00330";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
623 NZ_CP027599.1 RefSeq transcript 54133 55017 . - . gene_id "nbis-gene-55"; transcript_id "gene-C7A06_RS00330"; ID "gene-C7A06_RS00330"; Name "C7A06_RS00330"; Parent "nbis-gene-55"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00330"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
624 NZ_CP027599.1 Protein Homology exon 54133 55017 . - . gene_id "nbis-gene-55"; transcript_id "gene-C7A06_RS00330"; Dbxref "Genbank:WP_000010408.1"; ID "nbis-exon-59"; Name "WP_000010408.1"; Ontology_term "GO:0005525"; Parent "gene-C7A06_RS00330"; gbkey "CDS"; go_function "GTP binding|0005525||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001557377.1"; locus_tag "C7A06_RS00330"; product "50S ribosome-binding GTPase"; protein_id "WP_000010408.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
625 NZ_CP027599.1 Protein Homology CDS 54133 55017 . - 0 gene_id "nbis-gene-55"; transcript_id "gene-C7A06_RS00330"; Dbxref "Genbank:WP_000010408.1"; ID "cds-WP_000010408.1"; Name "WP_000010408.1"; Ontology_term "GO:0005525"; Parent "gene-C7A06_RS00330"; gbkey "CDS"; go_function "GTP binding|0005525||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001557377.1"; locus_tag "C7A06_RS00330"; product "50S ribosome-binding GTPase"; protein_id "WP_000010408.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
626 NZ_CP027599.1 RefSeq gene 55202 56332 . + . gene_id "nbis-gene-56"; ID "nbis-gene-56"; Name "C7A06_RS00335"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00335";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
627 NZ_CP027599.1 RefSeq transcript 55202 56332 . + . gene_id "nbis-gene-56"; transcript_id "gene-C7A06_RS00335"; ID "gene-C7A06_RS00335"; Name "C7A06_RS00335"; Parent "nbis-gene-56"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00335"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
628 NZ_CP027599.1 Protein Homology exon 55202 56332 . + . gene_id "nbis-gene-56"; transcript_id "gene-C7A06_RS00335"; Dbxref "Genbank:WP_000147741.1"; ID "nbis-exon-60"; Name "WP_000147741.1"; Parent "gene-C7A06_RS00335"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000147750.1"; locus_tag "C7A06_RS00335"; product "hypothetical protein"; protein_id "WP_000147741.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
629 NZ_CP027599.1 Protein Homology CDS 55202 56332 . + 0 gene_id "nbis-gene-56"; transcript_id "gene-C7A06_RS00335"; Dbxref "Genbank:WP_000147741.1"; ID "cds-WP_000147741.1"; Name "WP_000147741.1"; Parent "gene-C7A06_RS00335"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000147750.1"; locus_tag "C7A06_RS00335"; product "hypothetical protein"; protein_id "WP_000147741.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
630 NZ_CP027599.1 RefSeq gene 57825 58556 . + . gene_id "nbis-gene-57"; ID "nbis-gene-57"; Name "C7A06_RS00340"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00340";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
631 NZ_CP027599.1 RefSeq transcript 57825 58556 . + . gene_id "nbis-gene-57"; transcript_id "gene-C7A06_RS00340"; ID "gene-C7A06_RS00340"; Name "C7A06_RS00340"; Parent "nbis-gene-57"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00340"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
632 NZ_CP027599.1 Protein Homology exon 57825 58556 . + . gene_id "nbis-gene-57"; transcript_id "gene-C7A06_RS00340"; Dbxref "Genbank:WP_001075456.1"; ID "nbis-exon-61"; Name "WP_001075456.1"; Parent "gene-C7A06_RS00340"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001075464.1"; locus_tag "C7A06_RS00340"; product "inovirus Gp2 family protein"; protein_id "WP_001075456.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
633 NZ_CP027599.1 Protein Homology CDS 57825 58556 . + 0 gene_id "nbis-gene-57"; transcript_id "gene-C7A06_RS00340"; Dbxref "Genbank:WP_001075456.1"; ID "cds-WP_001075456.1"; Name "WP_001075456.1"; Parent "gene-C7A06_RS00340"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001075464.1"; locus_tag "C7A06_RS00340"; product "inovirus Gp2 family protein"; protein_id "WP_001075456.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
634 NZ_CP027599.1 RefSeq gene 58884 59762 . + . gene_id "nbis-gene-58"; ID "nbis-gene-58"; Name "C7A06_RS00345"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00345";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
635 NZ_CP027599.1 RefSeq transcript 58884 59762 . + . gene_id "nbis-gene-58"; transcript_id "gene-C7A06_RS00345"; ID "gene-C7A06_RS00345"; Name "C7A06_RS00345"; Parent "nbis-gene-58"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00345"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
636 NZ_CP027599.1 Protein Homology exon 58884 59762 . + . gene_id "nbis-gene-58"; transcript_id "gene-C7A06_RS00345"; Dbxref "Genbank:WP_000769115.1"; ID "nbis-exon-62"; Name "WP_000769115.1"; Parent "gene-C7A06_RS00345"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_008786839.1"; locus_tag "C7A06_RS00345"; product "restriction endonuclease"; protein_id "WP_000769115.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
637 NZ_CP027599.1 Protein Homology CDS 58884 59762 . + 0 gene_id "nbis-gene-58"; transcript_id "gene-C7A06_RS00345"; Dbxref "Genbank:WP_000769115.1"; ID "cds-WP_000769115.1"; Name "WP_000769115.1"; Parent "gene-C7A06_RS00345"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_008786839.1"; locus_tag "C7A06_RS00345"; product "restriction endonuclease"; protein_id "WP_000769115.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
638 NZ_CP027599.1 RefSeq gene 59816 60369 . + . gene_id "nbis-pseudogene-5"; ID "nbis-pseudogene-5"; Name "C7A06_RS00350"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS00350"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "59816";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
639 NZ_CP027599.1 RefSeq transcript 59816 60369 . + . gene_id "nbis-pseudogene-5"; transcript_id "gene-C7A06_RS00350"; ID "gene-C7A06_RS00350"; Name "C7A06_RS00350"; Parent "nbis-pseudogene-5"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS00350"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "59816";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
640 NZ_CP027599.1 Protein Homology exon 59816 60369 . + . gene_id "nbis-pseudogene-5"; transcript_id "gene-C7A06_RS00350"; ID "nbis-exon-63"; Note "frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus"; Ontology_term "GO:0006313" "GO:0003677" "GO:0004803"; Parent "gene-C7A06_RS00350"; gbkey "CDS"; go_function "DNA binding|0003677||IEA" "transposase activity|0004803||IEA"; go_process "transposition, DNA-mediated|0006313||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1"; locus_tag "C7A06_RS00350"; partial "true"; product "transposase"; pseudo "true"; start_range "." "59816"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
641 NZ_CP027599.1 Protein Homology CDS 59816 60369 . + 0 gene_id "nbis-pseudogene-5"; transcript_id "gene-C7A06_RS00350"; ID "cds-C7A06_RS00350"; Note "frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus"; Ontology_term "GO:0006313" "GO:0003677" "GO:0004803"; Parent "gene-C7A06_RS00350"; gbkey "CDS"; go_function "DNA binding|0003677||IEA" "transposase activity|0004803||IEA"; go_process "transposition, DNA-mediated|0006313||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1"; locus_tag "C7A06_RS00350"; partial "true"; product "transposase"; pseudo "true"; start_range "." "59816"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
642 NZ_CP027599.1 RefSeq gene 61437 62003 . + . gene_id "nbis-gene-59"; ID "nbis-gene-59"; Name "C7A06_RS00355"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00355";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
643 NZ_CP027599.1 RefSeq transcript 61437 62003 . + . gene_id "nbis-gene-59"; transcript_id "gene-C7A06_RS00355"; ID "gene-C7A06_RS00355"; Name "C7A06_RS00355"; Parent "nbis-gene-59"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00355"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
644 NZ_CP027599.1 Protein Homology exon 61437 62003 . + . gene_id "nbis-gene-59"; transcript_id "gene-C7A06_RS00355"; Dbxref "Genbank:WP_001126817.1"; ID "nbis-exon-64"; Name "WP_001126817.1"; Parent "gene-C7A06_RS00355"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001126805.1"; locus_tag "C7A06_RS00355"; product "inovirus-type Gp2 protein"; protein_id "WP_001126817.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
645 NZ_CP027599.1 Protein Homology CDS 61437 62003 . + 0 gene_id "nbis-gene-59"; transcript_id "gene-C7A06_RS00355"; Dbxref "Genbank:WP_001126817.1"; ID "cds-WP_001126817.1"; Name "WP_001126817.1"; Parent "gene-C7A06_RS00355"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001126805.1"; locus_tag "C7A06_RS00355"; product "inovirus-type Gp2 protein"; protein_id "WP_001126817.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
646 NZ_CP027599.1 RefSeq gene 62250 62822 . + . gene_id "nbis-gene-60"; ID "nbis-gene-60"; Name "C7A06_RS00360"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00360";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
647 NZ_CP027599.1 RefSeq transcript 62250 62822 . + . gene_id "nbis-gene-60"; transcript_id "gene-C7A06_RS00360"; ID "gene-C7A06_RS00360"; Name "C7A06_RS00360"; Parent "nbis-gene-60"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00360"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
648 NZ_CP027599.1 Protein Homology exon 62250 62822 . + . gene_id "nbis-gene-60"; transcript_id "gene-C7A06_RS00360"; Dbxref "Genbank:WP_000991590.1"; ID "nbis-exon-65"; Name "WP_000991590.1"; Parent "gene-C7A06_RS00360"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012602601.1"; locus_tag "C7A06_RS00360"; product "hypothetical protein"; protein_id "WP_000991590.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
649 NZ_CP027599.1 Protein Homology CDS 62250 62822 . + 0 gene_id "nbis-gene-60"; transcript_id "gene-C7A06_RS00360"; Dbxref "Genbank:WP_000991590.1"; ID "cds-WP_000991590.1"; Name "WP_000991590.1"; Parent "gene-C7A06_RS00360"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012602601.1"; locus_tag "C7A06_RS00360"; product "hypothetical protein"; protein_id "WP_000991590.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
650 NZ_CP027599.1 RefSeq gene 62891 63127 . + . gene_id "nbis-gene-61"; ID "nbis-gene-61"; Name "C7A06_RS00365"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00365";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
651 NZ_CP027599.1 RefSeq transcript 62891 63127 . + . gene_id "nbis-gene-61"; transcript_id "gene-C7A06_RS00365"; ID "gene-C7A06_RS00365"; Name "C7A06_RS00365"; Parent "nbis-gene-61"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00365"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
652 NZ_CP027599.1 Protein Homology exon 62891 63127 . + . gene_id "nbis-gene-61"; transcript_id "gene-C7A06_RS00365"; Dbxref "Genbank:WP_000958094.1"; ID "nbis-exon-66"; Name "WP_000958094.1"; Parent "gene-C7A06_RS00365"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000958092.1"; locus_tag "C7A06_RS00365"; product "AlpA family transcriptional regulator"; protein_id "WP_000958094.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
653 NZ_CP027599.1 Protein Homology CDS 62891 63127 . + 0 gene_id "nbis-gene-61"; transcript_id "gene-C7A06_RS00365"; Dbxref "Genbank:WP_000958094.1"; ID "cds-WP_000958094.1"; Name "WP_000958094.1"; Parent "gene-C7A06_RS00365"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000958092.1"; locus_tag "C7A06_RS00365"; product "AlpA family transcriptional regulator"; protein_id "WP_000958094.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
654 NZ_CP027599.1 RefSeq gene 63762 64880 . + . gene_id "nbis-gene-62"; ID "nbis-gene-62"; Name "C7A06_RS00375"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00375";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
655 NZ_CP027599.1 RefSeq transcript 63762 64880 . + . gene_id "nbis-gene-62"; transcript_id "gene-C7A06_RS00375"; ID "gene-C7A06_RS00375"; Name "C7A06_RS00375"; Parent "nbis-gene-62"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00375"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
656 NZ_CP027599.1 Protein Homology exon 63762 64880 . + . gene_id "nbis-gene-62"; transcript_id "gene-C7A06_RS00375"; Dbxref "Genbank:WP_001231527.1"; ID "nbis-exon-67"; Name "WP_001231527.1"; Parent "gene-C7A06_RS00375"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001231518.1"; locus_tag "C7A06_RS00375"; product "glycosyltransferase"; protein_id "WP_001231527.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
657 NZ_CP027599.1 Protein Homology CDS 63762 64880 . + 0 gene_id "nbis-gene-62"; transcript_id "gene-C7A06_RS00375"; Dbxref "Genbank:WP_001231527.1"; ID "cds-WP_001231527.1"; Name "WP_001231527.1"; Parent "gene-C7A06_RS00375"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001231518.1"; locus_tag "C7A06_RS00375"; product "glycosyltransferase"; protein_id "WP_001231527.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
658 NZ_CP027599.1 RefSeq gene 65029 66294 . - . gene_id "nbis-gene-63"; ID "nbis-gene-63"; Name "C7A06_RS00380"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00380";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
659 NZ_CP027599.1 RefSeq transcript 65029 66294 . - . gene_id "nbis-gene-63"; transcript_id "gene-C7A06_RS00380"; ID "gene-C7A06_RS00380"; Name "C7A06_RS00380"; Parent "nbis-gene-63"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00380"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
660 NZ_CP027599.1 Protein Homology exon 65029 66294 . - . gene_id "nbis-gene-63"; transcript_id "gene-C7A06_RS00380"; Dbxref "Genbank:WP_000800845.1"; ID "nbis-exon-68"; Name "WP_000800845.1"; Parent "gene-C7A06_RS00380"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000800843.1"; locus_tag "C7A06_RS00380"; product "alpha/beta hydrolase-fold protein"; protein_id "WP_000800845.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
661 NZ_CP027599.1 Protein Homology CDS 65029 66294 . - 0 gene_id "nbis-gene-63"; transcript_id "gene-C7A06_RS00380"; Dbxref "Genbank:WP_000800845.1"; ID "cds-WP_000800845.1"; Name "WP_000800845.1"; Parent "gene-C7A06_RS00380"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000800843.1"; locus_tag "C7A06_RS00380"; product "alpha/beta hydrolase-fold protein"; protein_id "WP_000800845.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
662 NZ_CP027599.1 RefSeq gene 66842 67276 . - . gene_id "nbis-gene-64"; ID "nbis-gene-64"; Name "C7A06_RS00390"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00390";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
663 NZ_CP027599.1 RefSeq transcript 66842 67276 . - . gene_id "nbis-gene-64"; transcript_id "gene-C7A06_RS00390"; ID "gene-C7A06_RS00390"; Name "C7A06_RS00390"; Parent "nbis-gene-64"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00390"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
664 NZ_CP027599.1 Protein Homology exon 66842 67276 . - . gene_id "nbis-gene-64"; transcript_id "gene-C7A06_RS00390"; Dbxref "Genbank:WP_000281561.1"; ID "nbis-exon-69"; Name "WP_000281561.1"; Parent "gene-C7A06_RS00390"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001554632.1"; locus_tag "C7A06_RS00390"; product "hypothetical protein"; protein_id "WP_000281561.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
665 NZ_CP027599.1 Protein Homology CDS 66842 67276 . - 0 gene_id "nbis-gene-64"; transcript_id "gene-C7A06_RS00390"; Dbxref "Genbank:WP_000281561.1"; ID "cds-WP_000281561.1"; Name "WP_000281561.1"; Parent "gene-C7A06_RS00390"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001554632.1"; locus_tag "C7A06_RS00390"; product "hypothetical protein"; protein_id "WP_000281561.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
666 NZ_CP027599.1 RefSeq gene 68088 68297 . + . gene_id "nbis-gene-65"; ID "nbis-gene-65"; Name "mchI"; gbkey "Gene"; gene "mchI"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00395";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
667 NZ_CP027599.1 RefSeq transcript 68088 68297 . + . gene_id "nbis-gene-65"; transcript_id "gene-C7A06_RS00395"; ID "gene-C7A06_RS00395"; Name "mchI"; Parent "nbis-gene-65"; gbkey "Gene"; gene "mchI"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00395"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
668 NZ_CP027599.1 Protein Homology exon 68088 68297 . + . gene_id "nbis-gene-65"; transcript_id "gene-C7A06_RS00395"; Dbxref "Genbank:WP_000120664.1"; ID "nbis-exon-70"; Name "WP_000120664.1"; Parent "gene-C7A06_RS00395"; gbkey "CDS"; gene "mchI"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000120664.1"; locus_tag "C7A06_RS00395"; product "microcin H47 immunity protein MchI"; protein_id "WP_000120664.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
669 NZ_CP027599.1 Protein Homology CDS 68088 68297 . + 0 gene_id "nbis-gene-65"; transcript_id "gene-C7A06_RS00395"; Dbxref "Genbank:WP_000120664.1"; ID "cds-WP_000120664.1"; Name "WP_000120664.1"; Parent "gene-C7A06_RS00395"; gbkey "CDS"; gene "mchI"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000120664.1"; locus_tag "C7A06_RS00395"; product "microcin H47 immunity protein MchI"; protein_id "WP_000120664.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
670 NZ_CP027599.1 RefSeq gene 68314 68541 . + . gene_id "nbis-gene-66"; ID "nbis-gene-66"; Name "mchB"; gbkey "Gene"; gene "mchB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00400";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
671 NZ_CP027599.1 RefSeq transcript 68314 68541 . + . gene_id "nbis-gene-66"; transcript_id "gene-C7A06_RS00400"; ID "gene-C7A06_RS00400"; Name "mchB"; Parent "nbis-gene-66"; gbkey "Gene"; gene "mchB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00400"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
672 NZ_CP027599.1 Protein Homology exon 68314 68541 . + . gene_id "nbis-gene-66"; transcript_id "gene-C7A06_RS00400"; Dbxref "Genbank:WP_001375214.1"; ID "nbis-exon-71"; Name "WP_001375214.1"; Parent "gene-C7A06_RS00400"; gbkey "CDS"; gene "mchB"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001375214.1"; locus_tag "C7A06_RS00400"; product "microcin H47"; protein_id "WP_001375214.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
673 NZ_CP027599.1 Protein Homology CDS 68314 68541 . + 0 gene_id "nbis-gene-66"; transcript_id "gene-C7A06_RS00400"; Dbxref "Genbank:WP_001375214.1"; ID "cds-WP_001375214.1"; Name "WP_001375214.1"; Parent "gene-C7A06_RS00400"; gbkey "CDS"; gene "mchB"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001375214.1"; locus_tag "C7A06_RS00400"; product "microcin H47"; protein_id "WP_001375214.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
674 NZ_CP027599.1 RefSeq gene 68812 70362 . + . gene_id "nbis-gene-67"; ID "nbis-gene-67"; Name "C7A06_RS00405"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00405";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
675 NZ_CP027599.1 RefSeq transcript 68812 70362 . + . gene_id "nbis-gene-67"; transcript_id "gene-C7A06_RS00405"; ID "gene-C7A06_RS00405"; Name "C7A06_RS00405"; Parent "nbis-gene-67"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00405"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
676 NZ_CP027599.1 Protein Homology exon 68812 70362 . + . gene_id "nbis-gene-67"; transcript_id "gene-C7A06_RS00405"; Dbxref "Genbank:WP_000019329.1"; ID "nbis-exon-72"; Name "WP_000019329.1"; Parent "gene-C7A06_RS00405"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000019324.1"; locus_tag "C7A06_RS00405"; product "hypothetical protein"; protein_id "WP_000019329.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
677 NZ_CP027599.1 Protein Homology CDS 68812 70362 . + 0 gene_id "nbis-gene-67"; transcript_id "gene-C7A06_RS00405"; Dbxref "Genbank:WP_000019329.1"; ID "cds-WP_000019329.1"; Name "WP_000019329.1"; Parent "gene-C7A06_RS00405"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000019324.1"; locus_tag "C7A06_RS00405"; product "hypothetical protein"; protein_id "WP_000019329.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
678 NZ_CP027599.1 RefSeq gene 70466 70840 . + . gene_id "nbis-gene-68"; ID "nbis-gene-68"; Name "C7A06_RS00410"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00410";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
679 NZ_CP027599.1 RefSeq transcript 70466 70840 . + . gene_id "nbis-gene-68"; transcript_id "gene-C7A06_RS00410"; ID "gene-C7A06_RS00410"; Name "C7A06_RS00410"; Parent "nbis-gene-68"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00410"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
680 NZ_CP027599.1 Protein Homology exon 70466 70840 . + . gene_id "nbis-gene-68"; transcript_id "gene-C7A06_RS00410"; Dbxref "Genbank:WP_001391575.1"; ID "nbis-exon-73"; Name "WP_001391575.1"; Ontology_term "GO:0009404" "GO:0016746" "GO:0005737"; Parent "gene-C7A06_RS00410"; gbkey "CDS"; go_component "cytoplasm|0005737||IEA"; go_function "acyltransferase activity|0016746||IEA"; go_process "toxin metabolic process|0009404||IEA"; inference "COORDINATES: protein motif:HMM:NF014813.2"; locus_tag "C7A06_RS00410"; product "toxin-activating lysine-acyltransferase"; protein_id "WP_001391575.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
681 NZ_CP027599.1 Protein Homology CDS 70466 70840 . + 0 gene_id "nbis-gene-68"; transcript_id "gene-C7A06_RS00410"; Dbxref "Genbank:WP_001391575.1"; ID "cds-WP_001391575.1"; Name "WP_001391575.1"; Ontology_term "GO:0009404" "GO:0016746" "GO:0005737"; Parent "gene-C7A06_RS00410"; gbkey "CDS"; go_component "cytoplasm|0005737||IEA"; go_function "acyltransferase activity|0016746||IEA"; go_process "toxin metabolic process|0009404||IEA"; inference "COORDINATES: protein motif:HMM:NF014813.2"; locus_tag "C7A06_RS00410"; product "toxin-activating lysine-acyltransferase"; protein_id "WP_001391575.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
682 NZ_CP027599.1 RefSeq gene 70993 72267 . + . gene_id "nbis-gene-69"; ID "nbis-gene-69"; Name "C7A06_RS00415"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00415";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
683 NZ_CP027599.1 RefSeq transcript 70993 72267 . + . gene_id "nbis-gene-69"; transcript_id "gene-C7A06_RS00415"; ID "gene-C7A06_RS00415"; Name "C7A06_RS00415"; Parent "nbis-gene-69"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00415"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
684 NZ_CP027599.1 Protein Homology exon 70993 72267 . + . gene_id "nbis-gene-69"; transcript_id "gene-C7A06_RS00415"; Dbxref "Genbank:WP_000489612.1"; ID "nbis-exon-74"; Name "WP_000489612.1"; Parent "gene-C7A06_RS00415"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000489618.1"; locus_tag "C7A06_RS00415"; product "HlyD family secretion protein"; protein_id "WP_000489612.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
685 NZ_CP027599.1 Protein Homology CDS 70993 72267 . + 0 gene_id "nbis-gene-69"; transcript_id "gene-C7A06_RS00415"; Dbxref "Genbank:WP_000489612.1"; ID "cds-WP_000489612.1"; Name "WP_000489612.1"; Parent "gene-C7A06_RS00415"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000489618.1"; locus_tag "C7A06_RS00415"; product "HlyD family secretion protein"; protein_id "WP_000489612.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
686 NZ_CP027599.1 RefSeq gene 72260 74356 . + . gene_id "nbis-gene-70"; ID "nbis-gene-70"; Name "mchF"; gbkey "Gene"; gene "mchF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00420";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
687 NZ_CP027599.1 RefSeq transcript 72260 74356 . + . gene_id "nbis-gene-70"; transcript_id "gene-C7A06_RS00420"; ID "gene-C7A06_RS00420"; Name "mchF"; Parent "nbis-gene-70"; gbkey "Gene"; gene "mchF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00420"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
688 NZ_CP027599.1 Protein Homology exon 72260 74356 . + . gene_id "nbis-gene-70"; transcript_id "gene-C7A06_RS00420"; Dbxref "Genbank:WP_000181294.1"; ID "nbis-exon-75"; Name "WP_000181294.1"; Parent "gene-C7A06_RS00420"; gbkey "CDS"; gene "mchF"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001529577.1"; locus_tag "C7A06_RS00420"; product "microcin export transporter peptidase/ATP-binding subunit MchF"; protein_id "WP_000181294.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
689 NZ_CP027599.1 Protein Homology CDS 72260 74356 . + 0 gene_id "nbis-gene-70"; transcript_id "gene-C7A06_RS00420"; Dbxref "Genbank:WP_000181294.1"; ID "cds-WP_000181294.1"; Name "WP_000181294.1"; Parent "gene-C7A06_RS00420"; gbkey "CDS"; gene "mchF"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001529577.1"; locus_tag "C7A06_RS00420"; product "microcin export transporter peptidase/ATP-binding subunit MchF"; protein_id "WP_000181294.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
690 NZ_CP027599.1 RefSeq gene 74610 74888 . + . gene_id "nbis-gene-71"; ID "nbis-gene-71"; Name "mcmA"; gbkey "Gene"; gene "mcmA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00430";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
691 NZ_CP027599.1 RefSeq transcript 74610 74888 . + . gene_id "nbis-gene-71"; transcript_id "gene-C7A06_RS00430"; ID "gene-C7A06_RS00430"; Name "mcmA"; Parent "nbis-gene-71"; gbkey "Gene"; gene "mcmA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00430"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
692 NZ_CP027599.1 Protein Homology exon 74610 74888 . + . gene_id "nbis-gene-71"; transcript_id "gene-C7A06_RS00430"; Dbxref "Genbank:WP_071531329.1"; ID "nbis-exon-76"; Name "WP_071531329.1"; Parent "gene-C7A06_RS00430"; gbkey "CDS"; gene "mcmA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001466656.1"; locus_tag "C7A06_RS00430"; product "microcin McmA"; protein_id "WP_071531329.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
693 NZ_CP027599.1 Protein Homology CDS 74610 74888 . + 0 gene_id "nbis-gene-71"; transcript_id "gene-C7A06_RS00430"; Dbxref "Genbank:WP_071531329.1"; ID "cds-WP_071531329.1"; Name "WP_071531329.1"; Parent "gene-C7A06_RS00430"; gbkey "CDS"; gene "mcmA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001466656.1"; locus_tag "C7A06_RS00430"; product "microcin McmA"; protein_id "WP_071531329.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
694 NZ_CP027599.1 RefSeq gene 75027 75203 . - . gene_id "nbis-gene-5829"; ID "nbis-gene-5829"; Name "C7A06_RS34795"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS34795";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
695 NZ_CP027599.1 RefSeq transcript 75027 75203 . - . gene_id "nbis-gene-5829"; transcript_id "gene-C7A06_RS34795"; ID "gene-C7A06_RS34795"; Name "C7A06_RS34795"; Parent "nbis-gene-5829"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS34795"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
696 NZ_CP027599.1 Protein Homology exon 75027 75203 . - . gene_id "nbis-gene-5829"; transcript_id "gene-C7A06_RS34795"; Dbxref "Genbank:WP_231360822.1"; ID "nbis-exon-6139"; Name "WP_231360822.1"; Parent "gene-C7A06_RS34795"; gbkey "CDS"; inference "COORDINATES: protein motif:HMM:NF014566.2"; locus_tag "C7A06_RS34795"; product "hypothetical protein"; protein_id "WP_231360822.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
697 NZ_CP027599.1 Protein Homology CDS 75027 75203 . - 0 gene_id "nbis-gene-5829"; transcript_id "gene-C7A06_RS34795"; Dbxref "Genbank:WP_231360822.1"; ID "cds-WP_231360822.1"; Name "WP_231360822.1"; Parent "gene-C7A06_RS34795"; gbkey "CDS"; inference "COORDINATES: protein motif:HMM:NF014566.2"; locus_tag "C7A06_RS34795"; product "hypothetical protein"; protein_id "WP_231360822.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
698 NZ_CP027599.1 RefSeq gene 75790 76101 . - . gene_id "nbis-pseudogene-310"; ID "nbis-pseudogene-310"; Name "C7A06_RS34800"; end_range "76101" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS34800"; original_biotype "pseudogene"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
699 NZ_CP027599.1 RefSeq transcript 75790 76101 . - . gene_id "nbis-pseudogene-310"; transcript_id "gene-C7A06_RS34800"; ID "gene-C7A06_RS34800"; Name "C7A06_RS34800"; Parent "nbis-pseudogene-310"; end_range "76101" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS34800"; original_biotype "mrna"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
700 NZ_CP027599.1 Protein Homology exon 75790 76101 . - . gene_id "nbis-pseudogene-310"; transcript_id "gene-C7A06_RS34800"; ID "nbis-exon-6140"; Note "incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS34800"; end_range "76101" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_309401.1"; locus_tag "C7A06_RS34800"; partial "true"; product "hypothetical protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
701 NZ_CP027599.1 Protein Homology CDS 75790 76101 . - 0 gene_id "nbis-pseudogene-310"; transcript_id "gene-C7A06_RS34800"; ID "cds-C7A06_RS34800"; Note "incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS34800"; end_range "76101" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_309401.1"; locus_tag "C7A06_RS34800"; partial "true"; product "hypothetical protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
702 NZ_CP027599.1 RefSeq gene 76178 76726 . + . gene_id "nbis-gene-72"; ID "nbis-gene-72"; Name "C7A06_RS00450"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00450";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
703 NZ_CP027599.1 RefSeq transcript 76178 76726 . + . gene_id "nbis-gene-72"; transcript_id "gene-C7A06_RS00450"; ID "gene-C7A06_RS00450"; Name "C7A06_RS00450"; Parent "nbis-gene-72"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00450"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
704 NZ_CP027599.1 Protein Homology exon 76178 76726 . + . gene_id "nbis-gene-72"; transcript_id "gene-C7A06_RS00450"; Dbxref "Genbank:WP_001167431.1"; ID "nbis-exon-77"; Name "WP_001167431.1"; Parent "gene-C7A06_RS00450"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001167424.1"; locus_tag "C7A06_RS00450"; product "hypothetical protein"; protein_id "WP_001167431.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
705 NZ_CP027599.1 Protein Homology CDS 76178 76726 . + 0 gene_id "nbis-gene-72"; transcript_id "gene-C7A06_RS00450"; Dbxref "Genbank:WP_001167431.1"; ID "cds-WP_001167431.1"; Name "WP_001167431.1"; Parent "gene-C7A06_RS00450"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001167424.1"; locus_tag "C7A06_RS00450"; product "hypothetical protein"; protein_id "WP_001167431.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
706 NZ_CP027599.1 RefSeq gene 76745 77089 . - . gene_id "nbis-gene-73"; ID "nbis-gene-73"; Name "C7A06_RS00455"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00455";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
707 NZ_CP027599.1 RefSeq transcript 76745 77089 . - . gene_id "nbis-gene-73"; transcript_id "gene-C7A06_RS00455"; ID "gene-C7A06_RS00455"; Name "C7A06_RS00455"; Parent "nbis-gene-73"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00455"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
708 NZ_CP027599.1 Protein Homology exon 76745 77089 . - . gene_id "nbis-gene-73"; transcript_id "gene-C7A06_RS00455"; Dbxref "Genbank:WP_000166948.1"; ID "nbis-exon-78"; Name "WP_000166948.1"; Parent "gene-C7A06_RS00455"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000166950.1"; locus_tag "C7A06_RS00455"; product "ProQ/FinO family protein"; protein_id "WP_000166948.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
709 NZ_CP027599.1 Protein Homology CDS 76745 77089 . - 0 gene_id "nbis-gene-73"; transcript_id "gene-C7A06_RS00455"; Dbxref "Genbank:WP_000166948.1"; ID "cds-WP_000166948.1"; Name "WP_000166948.1"; Parent "gene-C7A06_RS00455"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000166950.1"; locus_tag "C7A06_RS00455"; product "ProQ/FinO family protein"; protein_id "WP_000166948.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
710 NZ_CP027599.1 RefSeq gene 77086 77259 . - . gene_id "nbis-gene-74"; ID "nbis-gene-74"; Name "C7A06_RS00460"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00460";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
711 NZ_CP027599.1 RefSeq transcript 77086 77259 . - . gene_id "nbis-gene-74"; transcript_id "gene-C7A06_RS00460"; ID "gene-C7A06_RS00460"; Name "C7A06_RS00460"; Parent "nbis-gene-74"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00460"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
712 NZ_CP027599.1 Protein Homology exon 77086 77259 . - . gene_id "nbis-gene-74"; transcript_id "gene-C7A06_RS00460"; Dbxref "Genbank:WP_000258194.1"; ID "nbis-exon-79"; Name "WP_000258194.1"; Parent "gene-C7A06_RS00460"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000258194.1"; locus_tag "C7A06_RS00460"; product "hypothetical protein"; protein_id "WP_000258194.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
713 NZ_CP027599.1 Protein Homology CDS 77086 77259 . - 0 gene_id "nbis-gene-74"; transcript_id "gene-C7A06_RS00460"; Dbxref "Genbank:WP_000258194.1"; ID "cds-WP_000258194.1"; Name "WP_000258194.1"; Parent "gene-C7A06_RS00460"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000258194.1"; locus_tag "C7A06_RS00460"; product "hypothetical protein"; protein_id "WP_000258194.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
714 NZ_CP027599.1 RefSeq gene 77395 77568 . + . gene_id "nbis-gene-75"; ID "nbis-gene-75"; Name "C7A06_RS00465"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00465";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
715 NZ_CP027599.1 RefSeq transcript 77395 77568 . + . gene_id "nbis-gene-75"; transcript_id "gene-C7A06_RS00465"; ID "gene-C7A06_RS00465"; Name "C7A06_RS00465"; Parent "nbis-gene-75"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00465"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
716 NZ_CP027599.1 Protein Homology exon 77395 77568 . + . gene_id "nbis-gene-75"; transcript_id "gene-C7A06_RS00465"; Dbxref "Genbank:WP_153274857.1"; ID "nbis-exon-80"; Name "WP_153274857.1"; Parent "gene-C7A06_RS00465"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000130014.1"; locus_tag "C7A06_RS00465"; product "hypothetical protein"; protein_id "WP_153274857.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
717 NZ_CP027599.1 Protein Homology CDS 77395 77568 . + 0 gene_id "nbis-gene-75"; transcript_id "gene-C7A06_RS00465"; Dbxref "Genbank:WP_153274857.1"; ID "cds-WP_153274857.1"; Name "WP_153274857.1"; Parent "gene-C7A06_RS00465"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000130014.1"; locus_tag "C7A06_RS00465"; product "hypothetical protein"; protein_id "WP_153274857.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
718 NZ_CP027599.1 RefSeq gene 77982 78416 . + . gene_id "nbis-gene-76"; ID "nbis-gene-76"; Name "C7A06_RS00475"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00475";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
719 NZ_CP027599.1 RefSeq transcript 77982 78416 . + . gene_id "nbis-gene-76"; transcript_id "gene-C7A06_RS00475"; ID "gene-C7A06_RS00475"; Name "C7A06_RS00475"; Parent "nbis-gene-76"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00475"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
720 NZ_CP027599.1 Protein Homology exon 77982 78416 . + . gene_id "nbis-gene-76"; transcript_id "gene-C7A06_RS00475"; Dbxref "Genbank:WP_000038249.1"; ID "nbis-exon-81"; Name "WP_000038249.1"; Ontology_term "GO:0006355" "GO:0003677"; Parent "gene-C7A06_RS00475"; gbkey "CDS"; go_function "DNA binding|0003677||IEA"; go_process "regulation of transcription, DNA-templated|0006355||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000038245.1"; locus_tag "C7A06_RS00475"; product "H-NS histone family protein"; protein_id "WP_000038249.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
721 NZ_CP027599.1 Protein Homology CDS 77982 78416 . + 0 gene_id "nbis-gene-76"; transcript_id "gene-C7A06_RS00475"; Dbxref "Genbank:WP_000038249.1"; ID "cds-WP_000038249.1"; Name "WP_000038249.1"; Ontology_term "GO:0006355" "GO:0003677"; Parent "gene-C7A06_RS00475"; gbkey "CDS"; go_function "DNA binding|0003677||IEA"; go_process "regulation of transcription, DNA-templated|0006355||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000038245.1"; locus_tag "C7A06_RS00475"; product "H-NS histone family protein"; protein_id "WP_000038249.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
722 NZ_CP027599.1 RefSeq gene 78833 79402 . - . gene_id "nbis-gene-77"; ID "nbis-gene-77"; Name "C7A06_RS00480"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00480";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
723 NZ_CP027599.1 RefSeq transcript 78833 79402 . - . gene_id "nbis-gene-77"; transcript_id "gene-C7A06_RS00480"; ID "gene-C7A06_RS00480"; Name "C7A06_RS00480"; Parent "nbis-gene-77"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00480"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
724 NZ_CP027599.1 Protein Homology exon 78833 79402 . - . gene_id "nbis-gene-77"; transcript_id "gene-C7A06_RS00480"; Dbxref "Genbank:WP_000517678.1"; ID "nbis-exon-82"; Name "WP_000517678.1"; Parent "gene-C7A06_RS00480"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000517641.1"; locus_tag "C7A06_RS00480"; product "hypothetical protein"; protein_id "WP_000517678.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
725 NZ_CP027599.1 Protein Homology CDS 78833 79402 . - 0 gene_id "nbis-gene-77"; transcript_id "gene-C7A06_RS00480"; Dbxref "Genbank:WP_000517678.1"; ID "cds-WP_000517678.1"; Name "WP_000517678.1"; Parent "gene-C7A06_RS00480"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000517641.1"; locus_tag "C7A06_RS00480"; product "hypothetical protein"; protein_id "WP_000517678.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
726 NZ_CP027599.1 RefSeq gene 79502 80734 . - . gene_id "nbis-gene-78"; ID "nbis-gene-78"; Name "dgt"; gbkey "Gene"; gene "dgt"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00485";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
727 NZ_CP027599.1 RefSeq transcript 79502 80734 . - . gene_id "nbis-gene-78"; transcript_id "gene-C7A06_RS00485"; ID "gene-C7A06_RS00485"; Name "dgt"; Parent "nbis-gene-78"; gbkey "Gene"; gene "dgt"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00485"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
728 NZ_CP027599.1 Protein Homology exon 79502 80734 . - . gene_id "nbis-gene-78"; transcript_id "gene-C7A06_RS00485"; Dbxref "Genbank:WP_000271619.1"; ID "nbis-exon-83"; Name "WP_000271619.1"; Ontology_term "GO:0015949" "GO:0008832"; Parent "gene-C7A06_RS00485"; gbkey "CDS"; gene "dgt"; go_function "dGTPase activity|0008832||IEA"; go_process "nucleobase-containing small molecule interconversion|0015949||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001566974.1"; locus_tag "C7A06_RS00485"; product "dNTP triphosphohydrolase"; protein_id "WP_000271619.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
729 NZ_CP027599.1 Protein Homology CDS 79502 80734 . - 0 gene_id "nbis-gene-78"; transcript_id "gene-C7A06_RS00485"; Dbxref "Genbank:WP_000271619.1"; ID "cds-WP_000271619.1"; Name "WP_000271619.1"; Ontology_term "GO:0015949" "GO:0008832"; Parent "gene-C7A06_RS00485"; gbkey "CDS"; gene "dgt"; go_function "dGTPase activity|0008832||IEA"; go_process "nucleobase-containing small molecule interconversion|0015949||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001566974.1"; locus_tag "C7A06_RS00485"; product "dNTP triphosphohydrolase"; protein_id "WP_000271619.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
730 NZ_CP027599.1 RefSeq gene 80885 82047 . - . gene_id "nbis-gene-79"; ID "nbis-gene-79"; Name "C7A06_RS00490"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00490";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
731 NZ_CP027599.1 RefSeq transcript 80885 82047 . - . gene_id "nbis-gene-79"; transcript_id "gene-C7A06_RS00490"; ID "gene-C7A06_RS00490"; Name "C7A06_RS00490"; Parent "nbis-gene-79"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00490"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
732 NZ_CP027599.1 Protein Homology exon 80885 82047 . - . gene_id "nbis-gene-79"; transcript_id "gene-C7A06_RS00490"; Dbxref "Genbank:WP_106904140.1"; ID "nbis-exon-84"; Name "WP_106904140.1"; Note "programmed frameshift"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS00490"; exception "ribosomal slippage"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1"; locus_tag "C7A06_RS00490"; product "IS3 family transposase"; protein_id "WP_106904140.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
733 NZ_CP027599.1 Protein Homology CDS 80885 82047 . - 2 gene_id "nbis-gene-79"; transcript_id "gene-C7A06_RS00490"; Dbxref "Genbank:WP_106904140.1"; ID "cds-WP_106904140.1"; Name "WP_106904140.1"; Note "programmed frameshift"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS00490"; exception "ribosomal slippage"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1"; locus_tag "C7A06_RS00490"; product "IS3 family transposase"; protein_id "WP_106904140.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
734 NZ_CP027599.1 RefSeq gene 82610 83124 . - . gene_id "nbis-pseudogene-6"; ID "nbis-pseudogene-6"; Name "C7A06_RS00500"; end_range "83124" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS00500"; original_biotype "pseudogene"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
735 NZ_CP027599.1 RefSeq transcript 82610 83124 . - . gene_id "nbis-pseudogene-6"; transcript_id "gene-C7A06_RS00500"; ID "gene-C7A06_RS00500"; Name "C7A06_RS00500"; Parent "nbis-pseudogene-6"; end_range "83124" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS00500"; original_biotype "mrna"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
736 NZ_CP027599.1 Protein Homology exon 82610 83124 . - . gene_id "nbis-pseudogene-6"; transcript_id "gene-C7A06_RS00500"; ID "nbis-exon-85"; Note "frameshifted; incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS00500"; end_range "83124" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001368704.1"; locus_tag "C7A06_RS00500"; partial "true"; product "transposase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
737 NZ_CP027599.1 Protein Homology CDS 82610 83124 . - 0 gene_id "nbis-pseudogene-6"; transcript_id "gene-C7A06_RS00500"; ID "cds-C7A06_RS00500"; Note "frameshifted; incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS00500"; end_range "83124" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001368704.1"; locus_tag "C7A06_RS00500"; partial "true"; product "transposase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
738 NZ_CP027599.1 RefSeq gene 83732 87145 . + . gene_id "nbis-gene-80"; ID "nbis-gene-80"; Name "C7A06_RS00510"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00510";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
739 NZ_CP027599.1 RefSeq transcript 83732 87145 . + . gene_id "nbis-gene-80"; transcript_id "gene-C7A06_RS00510"; ID "gene-C7A06_RS00510"; Name "C7A06_RS00510"; Parent "nbis-gene-80"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00510"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
740 NZ_CP027599.1 Protein Homology exon 83732 87145 . + . gene_id "nbis-gene-80"; transcript_id "gene-C7A06_RS00510"; Dbxref "Genbank:WP_000438167.1"; ID "nbis-exon-86"; Name "WP_000438167.1"; Ontology_term "GO:0003677" "GO:0005524" "GO:0016787"; Parent "gene-C7A06_RS00510"; gbkey "CDS"; go_function "DNA binding|0003677||IEA" "ATP binding|0005524||IEA" "hydrolase activity|0016787||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000438152.1"; locus_tag "C7A06_RS00510"; product "DEAD/DEAH box helicase family protein"; protein_id "WP_000438167.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
741 NZ_CP027599.1 Protein Homology CDS 83732 87145 . + 0 gene_id "nbis-gene-80"; transcript_id "gene-C7A06_RS00510"; Dbxref "Genbank:WP_000438167.1"; ID "cds-WP_000438167.1"; Name "WP_000438167.1"; Ontology_term "GO:0003677" "GO:0005524" "GO:0016787"; Parent "gene-C7A06_RS00510"; gbkey "CDS"; go_function "DNA binding|0003677||IEA" "ATP binding|0005524||IEA" "hydrolase activity|0016787||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000438152.1"; locus_tag "C7A06_RS00510"; product "DEAD/DEAH box helicase family protein"; protein_id "WP_000438167.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
742 NZ_CP027599.1 RefSeq gene 87209 88843 . + . gene_id "nbis-gene-81"; ID "nbis-gene-81"; Name "C7A06_RS00515"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00515";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
743 NZ_CP027599.1 RefSeq transcript 87209 88843 . + . gene_id "nbis-gene-81"; transcript_id "gene-C7A06_RS00515"; ID "gene-C7A06_RS00515"; Name "C7A06_RS00515"; Parent "nbis-gene-81"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00515"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
744 NZ_CP027599.1 Protein Homology exon 87209 88843 . + . gene_id "nbis-gene-81"; transcript_id "gene-C7A06_RS00515"; Dbxref "Genbank:WP_000627719.1"; ID "nbis-exon-87"; Name "WP_000627719.1"; Parent "gene-C7A06_RS00515"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000627727.1"; locus_tag "C7A06_RS00515"; product "type I restriction-modification system subunit M"; protein_id "WP_000627719.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
745 NZ_CP027599.1 Protein Homology CDS 87209 88843 . + 0 gene_id "nbis-gene-81"; transcript_id "gene-C7A06_RS00515"; Dbxref "Genbank:WP_000627719.1"; ID "cds-WP_000627719.1"; Name "WP_000627719.1"; Parent "gene-C7A06_RS00515"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000627727.1"; locus_tag "C7A06_RS00515"; product "type I restriction-modification system subunit M"; protein_id "WP_000627719.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
746 NZ_CP027599.1 RefSeq gene 88840 89982 . + . gene_id "nbis-gene-82"; ID "nbis-gene-82"; Name "C7A06_RS00520"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00520";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
747 NZ_CP027599.1 RefSeq transcript 88840 89982 . + . gene_id "nbis-gene-82"; transcript_id "gene-C7A06_RS00520"; ID "gene-C7A06_RS00520"; Name "C7A06_RS00520"; Parent "nbis-gene-82"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00520"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
748 NZ_CP027599.1 Protein Homology exon 88840 89982 . + . gene_id "nbis-gene-82"; transcript_id "gene-C7A06_RS00520"; Dbxref "Genbank:WP_001680721.1"; ID "nbis-exon-88"; Name "WP_001680721.1"; Ontology_term "GO:0006304" "GO:0003677"; Parent "gene-C7A06_RS00520"; gbkey "CDS"; go_function "DNA binding|0003677||IEA"; go_process "DNA modification|0006304||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001680721.1"; locus_tag "C7A06_RS00520"; product "restriction endonuclease subunit S"; protein_id "WP_001680721.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
749 NZ_CP027599.1 Protein Homology CDS 88840 89982 . + 0 gene_id "nbis-gene-82"; transcript_id "gene-C7A06_RS00520"; Dbxref "Genbank:WP_001680721.1"; ID "cds-WP_001680721.1"; Name "WP_001680721.1"; Ontology_term "GO:0006304" "GO:0003677"; Parent "gene-C7A06_RS00520"; gbkey "CDS"; go_function "DNA binding|0003677||IEA"; go_process "DNA modification|0006304||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001680721.1"; locus_tag "C7A06_RS00520"; product "restriction endonuclease subunit S"; protein_id "WP_001680721.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
750 NZ_CP027599.1 RefSeq gene 89991 91613 . + . gene_id "nbis-gene-83"; ID "nbis-gene-83"; Name "C7A06_RS00525"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00525";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
751 NZ_CP027599.1 RefSeq transcript 89991 91613 . + . gene_id "nbis-gene-83"; transcript_id "gene-C7A06_RS00525"; ID "gene-C7A06_RS00525"; Name "C7A06_RS00525"; Parent "nbis-gene-83"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00525"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
752 NZ_CP027599.1 Protein Homology exon 89991 91613 . + . gene_id "nbis-gene-83"; transcript_id "gene-C7A06_RS00525"; Dbxref "Genbank:WP_000778953.1"; ID "nbis-exon-89"; Name "WP_000778953.1"; Parent "gene-C7A06_RS00525"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000778955.1"; locus_tag "C7A06_RS00525"; product "AAA family ATPase"; protein_id "WP_000778953.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
753 NZ_CP027599.1 Protein Homology CDS 89991 91613 . + 0 gene_id "nbis-gene-83"; transcript_id "gene-C7A06_RS00525"; Dbxref "Genbank:WP_000778953.1"; ID "cds-WP_000778953.1"; Name "WP_000778953.1"; Parent "gene-C7A06_RS00525"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000778955.1"; locus_tag "C7A06_RS00525"; product "AAA family ATPase"; protein_id "WP_000778953.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
754 NZ_CP027599.1 RefSeq gene 91613 92509 . + . gene_id "nbis-gene-84"; ID "nbis-gene-84"; Name "C7A06_RS00530"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00530";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
755 NZ_CP027599.1 RefSeq transcript 91613 92509 . + . gene_id "nbis-gene-84"; transcript_id "gene-C7A06_RS00530"; ID "gene-C7A06_RS00530"; Name "C7A06_RS00530"; Parent "nbis-gene-84"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00530"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
756 NZ_CP027599.1 Protein Homology exon 91613 92509 . + . gene_id "nbis-gene-84"; transcript_id "gene-C7A06_RS00530"; Dbxref "Genbank:WP_001680722.1"; ID "nbis-exon-90"; Name "WP_001680722.1"; Parent "gene-C7A06_RS00530"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001680722.1"; locus_tag "C7A06_RS00530"; product "hypothetical protein"; protein_id "WP_001680722.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
757 NZ_CP027599.1 Protein Homology CDS 91613 92509 . + 0 gene_id "nbis-gene-84"; transcript_id "gene-C7A06_RS00530"; Dbxref "Genbank:WP_001680722.1"; ID "cds-WP_001680722.1"; Name "WP_001680722.1"; Parent "gene-C7A06_RS00530"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001680722.1"; locus_tag "C7A06_RS00530"; product "hypothetical protein"; protein_id "WP_001680722.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
758 NZ_CP027599.1 RefSeq gene 92732 92910 . - . gene_id "nbis-pseudogene-7"; ID "nbis-pseudogene-7"; Name "C7A06_RS00535"; end_range "92910" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS00535"; original_biotype "pseudogene"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
759 NZ_CP027599.1 RefSeq transcript 92732 92910 . - . gene_id "nbis-pseudogene-7"; transcript_id "gene-C7A06_RS00535"; ID "gene-C7A06_RS00535"; Name "C7A06_RS00535"; Parent "nbis-pseudogene-7"; end_range "92910" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS00535"; original_biotype "mrna"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
760 NZ_CP027599.1 Protein Homology exon 92732 92910 . - . gene_id "nbis-pseudogene-7"; transcript_id "gene-C7A06_RS00535"; ID "nbis-exon-91"; Note "frameshifted; incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS00535"; end_range "92910" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012421665.1"; locus_tag "C7A06_RS00535"; partial "true"; product "integrase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
761 NZ_CP027599.1 Protein Homology CDS 92732 92910 . - 0 gene_id "nbis-pseudogene-7"; transcript_id "gene-C7A06_RS00535"; ID "cds-C7A06_RS00535"; Note "frameshifted; incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS00535"; end_range "92910" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012421665.1"; locus_tag "C7A06_RS00535"; partial "true"; product "integrase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
762 NZ_CP027599.1 RefSeq gene 93193 93561 . + . gene_id "nbis-gene-85"; ID "nbis-gene-85"; Name "C7A06_RS00540"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00540";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
763 NZ_CP027599.1 RefSeq transcript 93193 93561 . + . gene_id "nbis-gene-85"; transcript_id "gene-C7A06_RS00540"; ID "gene-C7A06_RS00540"; Name "C7A06_RS00540"; Parent "nbis-gene-85"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00540"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
764 NZ_CP027599.1 Protein Homology exon 93193 93561 . + . gene_id "nbis-gene-85"; transcript_id "gene-C7A06_RS00540"; Dbxref "Genbank:WP_001275820.1"; ID "nbis-exon-92"; Name "WP_001275820.1"; Parent "gene-C7A06_RS00540"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001275822.1"; locus_tag "C7A06_RS00540"; product "hypothetical protein"; protein_id "WP_001275820.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
765 NZ_CP027599.1 Protein Homology CDS 93193 93561 . + 0 gene_id "nbis-gene-85"; transcript_id "gene-C7A06_RS00540"; Dbxref "Genbank:WP_001275820.1"; ID "cds-WP_001275820.1"; Name "WP_001275820.1"; Parent "gene-C7A06_RS00540"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001275822.1"; locus_tag "C7A06_RS00540"; product "hypothetical protein"; protein_id "WP_001275820.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
766 NZ_CP027599.1 RefSeq gene 93779 94525 . + . gene_id "nbis-gene-86"; ID "nbis-gene-86"; Name "C7A06_RS00545"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00545";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
767 NZ_CP027599.1 RefSeq transcript 93779 94525 . + . gene_id "nbis-gene-86"; transcript_id "gene-C7A06_RS00545"; ID "gene-C7A06_RS00545"; Name "C7A06_RS00545"; Parent "nbis-gene-86"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00545"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
768 NZ_CP027599.1 Protein Homology exon 93779 94525 . + . gene_id "nbis-gene-86"; transcript_id "gene-C7A06_RS00545"; Dbxref "Genbank:WP_000755107.1"; ID "nbis-exon-93"; Name "WP_000755107.1"; Parent "gene-C7A06_RS00545"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001536427.1"; locus_tag "C7A06_RS00545"; product "porin family protein"; protein_id "WP_000755107.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
769 NZ_CP027599.1 Protein Homology CDS 93779 94525 . + 0 gene_id "nbis-gene-86"; transcript_id "gene-C7A06_RS00545"; Dbxref "Genbank:WP_000755107.1"; ID "cds-WP_000755107.1"; Name "WP_000755107.1"; Parent "gene-C7A06_RS00545"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001536427.1"; locus_tag "C7A06_RS00545"; product "porin family protein"; protein_id "WP_000755107.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
770 NZ_CP027599.1 RefSeq gene 94710 96211 . + . gene_id "nbis-pseudogene-8"; ID "nbis-pseudogene-8"; Name "C7A06_RS00550"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS00550"; original_biotype "pseudogene"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
771 NZ_CP027599.1 RefSeq transcript 94710 96211 . + . gene_id "nbis-pseudogene-8"; transcript_id "gene-C7A06_RS00550"; ID "gene-C7A06_RS00550"; Name "C7A06_RS00550"; Parent "nbis-pseudogene-8"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS00550"; original_biotype "mrna"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
772 NZ_CP027599.1 Protein Homology exon 94710 96211 . + . gene_id "nbis-pseudogene-8"; transcript_id "gene-C7A06_RS00550"; ID "nbis-exon-94"; Note "frameshifted"; Parent "gene-C7A06_RS00550"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001608786.1"; locus_tag "C7A06_RS00550"; product "phosphoethanolamine transferase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
773 NZ_CP027599.1 Protein Homology CDS 94710 96211 . + 0 gene_id "nbis-pseudogene-8"; transcript_id "gene-C7A06_RS00550"; ID "cds-C7A06_RS00550"; Note "frameshifted"; Parent "gene-C7A06_RS00550"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001608786.1"; locus_tag "C7A06_RS00550"; product "phosphoethanolamine transferase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
774 NZ_CP027599.1 RefSeq gene 96571 97614 . - . gene_id "nbis-gene-87"; ID "nbis-gene-87"; Name "C7A06_RS00560"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00560";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
775 NZ_CP027599.1 RefSeq transcript 96571 97614 . - . gene_id "nbis-gene-87"; transcript_id "gene-C7A06_RS00560"; ID "gene-C7A06_RS00560"; Name "C7A06_RS00560"; Parent "nbis-gene-87"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00560"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
776 NZ_CP027599.1 Protein Homology exon 96571 97614 . - . gene_id "nbis-gene-87"; transcript_id "gene-C7A06_RS00560"; Dbxref "Genbank:WP_000999846.1"; ID "nbis-exon-95"; Name "WP_000999846.1"; Parent "gene-C7A06_RS00560"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709438.1"; locus_tag "C7A06_RS00560"; product "hypothetical protein"; protein_id "WP_000999846.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
777 NZ_CP027599.1 Protein Homology CDS 96571 97614 . - 0 gene_id "nbis-gene-87"; transcript_id "gene-C7A06_RS00560"; Dbxref "Genbank:WP_000999846.1"; ID "cds-WP_000999846.1"; Name "WP_000999846.1"; Parent "gene-C7A06_RS00560"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709438.1"; locus_tag "C7A06_RS00560"; product "hypothetical protein"; protein_id "WP_000999846.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
778 NZ_CP027599.1 RefSeq gene 98026 99210 . - . gene_id "nbis-gene-88"; ID "nbis-gene-88"; Name "C7A06_RS00565"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00565";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
779 NZ_CP027599.1 RefSeq transcript 98026 99210 . - . gene_id "nbis-gene-88"; transcript_id "gene-C7A06_RS00565"; ID "gene-C7A06_RS00565"; Name "C7A06_RS00565"; Parent "nbis-gene-88"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00565"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
780 NZ_CP027599.1 Protein Homology exon 98026 99210 . - . gene_id "nbis-gene-88"; transcript_id "gene-C7A06_RS00565"; Dbxref "Genbank:WP_001218900.1"; ID "nbis-exon-96"; Name "WP_001218900.1"; Ontology_term "GO:0006310" "GO:0015074" "GO:0003677"; Parent "gene-C7A06_RS00565"; gbkey "CDS"; go_function "DNA binding|0003677||IEA"; go_process "DNA recombination|0006310||IEA" "DNA integration|0015074||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001218899.1"; locus_tag "C7A06_RS00565"; product "tyrosine-type recombinase/integrase"; protein_id "WP_001218900.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
781 NZ_CP027599.1 Protein Homology CDS 98026 99210 . - 0 gene_id "nbis-gene-88"; transcript_id "gene-C7A06_RS00565"; Dbxref "Genbank:WP_001218900.1"; ID "cds-WP_001218900.1"; Name "WP_001218900.1"; Ontology_term "GO:0006310" "GO:0015074" "GO:0003677"; Parent "gene-C7A06_RS00565"; gbkey "CDS"; go_function "DNA binding|0003677||IEA"; go_process "DNA recombination|0006310||IEA" "DNA integration|0015074||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001218899.1"; locus_tag "C7A06_RS00565"; product "tyrosine-type recombinase/integrase"; protein_id "WP_001218900.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
782 NZ_CP027599.1 RefSeq gene 99510 99604 . - . gene_id "gene-C7A06_RS00570"; ID "gene-C7A06_RS00570"; Name "C7A06_RS00570"; gbkey "Gene"; gene_biotype "tRNA"; locus_tag "C7A06_RS00570";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
783 NZ_CP027599.1 tRNAscan-SE transcript 99510 99604 . - . gene_id "gene-C7A06_RS00570"; transcript_id "rna-C7A06_RS00570"; ID "rna-C7A06_RS00570"; Parent "gene-C7A06_RS00570"; anticodon "(pos:complement(99568..99570))"; gbkey "tRNA"; inference "COORDINATES: profile:tRNAscan-SE:2.0.7"; locus_tag "C7A06_RS00570"; original_biotype "trna"; product "tRNA-Sec";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
784 NZ_CP027599.1 tRNAscan-SE exon 99510 99604 . - . gene_id "gene-C7A06_RS00570"; transcript_id "rna-C7A06_RS00570"; ID "exon-C7A06_RS00570-1"; Parent "rna-C7A06_RS00570"; anticodon "(pos:complement(99568..99570))"; gbkey "tRNA"; inference "COORDINATES: profile:tRNAscan-SE:2.0.7"; locus_tag "C7A06_RS00570"; product "tRNA-Sec";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
785 NZ_CP027599.1 RefSeq gene 99897 101279 . + . gene_id "nbis-gene-89"; ID "nbis-gene-89"; Name "yicJ"; gbkey "Gene"; gene "yicJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00575";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
786 NZ_CP027599.1 RefSeq transcript 99897 101279 . + . gene_id "nbis-gene-89"; transcript_id "gene-C7A06_RS00575"; ID "gene-C7A06_RS00575"; Name "yicJ"; Parent "nbis-gene-89"; gbkey "Gene"; gene "yicJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00575"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
787 NZ_CP027599.1 Protein Homology exon 99897 101279 . + . gene_id "nbis-gene-89"; transcript_id "gene-C7A06_RS00575"; Dbxref "Genbank:WP_000834439.1"; ID "nbis-exon-97"; Name "WP_000834439.1"; Ontology_term "GO:0006814" "GO:0008643" "GO:0015293" "GO:0016021"; Parent "gene-C7A06_RS00575"; gbkey "CDS"; gene "yicJ"; go_component "integral component of membrane|0016021||IEA"; go_function "symporter activity|0015293||IEA"; go_process "sodium ion transport|0006814||IEA" "carbohydrate transport|0008643||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418114.4"; locus_tag "C7A06_RS00575"; product "glycoside-pentoside-hexuronide family transporter"; protein_id "WP_000834439.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
788 NZ_CP027599.1 Protein Homology CDS 99897 101279 . + 0 gene_id "nbis-gene-89"; transcript_id "gene-C7A06_RS00575"; Dbxref "Genbank:WP_000834439.1"; ID "cds-WP_000834439.1"; Name "WP_000834439.1"; Ontology_term "GO:0006814" "GO:0008643" "GO:0015293" "GO:0016021"; Parent "gene-C7A06_RS00575"; gbkey "CDS"; gene "yicJ"; go_component "integral component of membrane|0016021||IEA"; go_function "symporter activity|0015293||IEA"; go_process "sodium ion transport|0006814||IEA" "carbohydrate transport|0008643||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418114.4"; locus_tag "C7A06_RS00575"; product "glycoside-pentoside-hexuronide family transporter"; protein_id "WP_000834439.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
789 NZ_CP027599.1 RefSeq gene 101289 103607 . + . gene_id "nbis-gene-90"; ID "nbis-gene-90"; Name "yicI"; gbkey "Gene"; gene "yicI"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00580";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
790 NZ_CP027599.1 RefSeq transcript 101289 103607 . + . gene_id "nbis-gene-90"; transcript_id "gene-C7A06_RS00580"; ID "gene-C7A06_RS00580"; Name "yicI"; Parent "nbis-gene-90"; gbkey "Gene"; gene "yicI"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00580"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
791 NZ_CP027599.1 Protein Homology exon 101289 103607 . + . gene_id "nbis-gene-90"; transcript_id "gene-C7A06_RS00580"; Dbxref "Genbank:WP_000702953.1"; ID "nbis-exon-98"; Name "WP_000702953.1"; Ontology_term "GO:0005975" "GO:0004553"; Parent "gene-C7A06_RS00580"; gbkey "CDS"; gene "yicI"; go_function "hydrolase activity, hydrolyzing O-glycosyl compounds|0004553||IEA"; go_process "carbohydrate metabolic process|0005975||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418113.1"; locus_tag "C7A06_RS00580"; product "alpha-xylosidase"; protein_id "WP_000702953.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
792 NZ_CP027599.1 Protein Homology CDS 101289 103607 . + 0 gene_id "nbis-gene-90"; transcript_id "gene-C7A06_RS00580"; Dbxref "Genbank:WP_000702953.1"; ID "cds-WP_000702953.1"; Name "WP_000702953.1"; Ontology_term "GO:0005975" "GO:0004553"; Parent "gene-C7A06_RS00580"; gbkey "CDS"; gene "yicI"; go_function "hydrolase activity, hydrolyzing O-glycosyl compounds|0004553||IEA"; go_process "carbohydrate metabolic process|0005975||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418113.1"; locus_tag "C7A06_RS00580"; product "alpha-xylosidase"; protein_id "WP_000702953.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
793 NZ_CP027599.1 RefSeq gene 103660 105369 . - . gene_id "nbis-gene-91"; ID "nbis-gene-91"; Name "yicH"; gbkey "Gene"; gene "yicH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00585";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
794 NZ_CP027599.1 RefSeq transcript 103660 105369 . - . gene_id "nbis-gene-91"; transcript_id "gene-C7A06_RS00585"; ID "gene-C7A06_RS00585"; Name "yicH"; Parent "nbis-gene-91"; gbkey "Gene"; gene "yicH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00585"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
795 NZ_CP027599.1 Protein Homology exon 103660 105369 . - . gene_id "nbis-gene-91"; transcript_id "gene-C7A06_RS00585"; Dbxref "Genbank:WP_001341763.1"; ID "nbis-exon-99"; Name "WP_001341763.1"; Parent "gene-C7A06_RS00585"; gbkey "CDS"; gene "yicH"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418112.1"; locus_tag "C7A06_RS00585"; product "AsmA family protein"; protein_id "WP_001341763.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
796 NZ_CP027599.1 Protein Homology CDS 103660 105369 . - 0 gene_id "nbis-gene-91"; transcript_id "gene-C7A06_RS00585"; Dbxref "Genbank:WP_001341763.1"; ID "cds-WP_001341763.1"; Name "WP_001341763.1"; Parent "gene-C7A06_RS00585"; gbkey "CDS"; gene "yicH"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418112.1"; locus_tag "C7A06_RS00585"; product "AsmA family protein"; protein_id "WP_001341763.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
797 NZ_CP027599.1 RefSeq gene 105490 106881 . - . gene_id "nbis-gene-92"; ID "nbis-gene-92"; Name "xanP"; gbkey "Gene"; gene "xanP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00590";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
798 NZ_CP027599.1 RefSeq transcript 105490 106881 . - . gene_id "nbis-gene-92"; transcript_id "gene-C7A06_RS00590"; ID "gene-C7A06_RS00590"; Name "xanP"; Parent "nbis-gene-92"; gbkey "Gene"; gene "xanP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00590"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
799 NZ_CP027599.1 Protein Homology exon 105490 106881 . - . gene_id "nbis-gene-92"; transcript_id "gene-C7A06_RS00590"; Dbxref "Genbank:WP_001295238.1"; ID "nbis-exon-100"; Name "WP_001295238.1"; Parent "gene-C7A06_RS00590"; gbkey "CDS"; gene "xanP"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312557.1"; locus_tag "C7A06_RS00590"; product "xanthine/proton symporter XanP"; protein_id "WP_001295238.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
800 NZ_CP027599.1 Protein Homology CDS 105490 106881 . - 0 gene_id "nbis-gene-92"; transcript_id "gene-C7A06_RS00590"; Dbxref "Genbank:WP_001295238.1"; ID "cds-WP_001295238.1"; Name "WP_001295238.1"; Parent "gene-C7A06_RS00590"; gbkey "CDS"; gene "xanP"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312557.1"; locus_tag "C7A06_RS00590"; product "xanthine/proton symporter XanP"; protein_id "WP_001295238.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
801 NZ_CP027599.1 RefSeq gene 107161 108366 . + . gene_id "nbis-gene-93"; ID "nbis-gene-93"; Name "gltS"; gbkey "Gene"; gene "gltS"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00595";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
802 NZ_CP027599.1 RefSeq transcript 107161 108366 . + . gene_id "nbis-gene-93"; transcript_id "gene-C7A06_RS00595"; ID "gene-C7A06_RS00595"; Name "gltS"; Parent "nbis-gene-93"; gbkey "Gene"; gene "gltS"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00595"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
803 NZ_CP027599.1 Protein Homology exon 107161 108366 . + . gene_id "nbis-gene-93"; transcript_id "gene-C7A06_RS00595"; Dbxref "Genbank:WP_000468836.1"; ID "nbis-exon-101"; Name "WP_000468836.1"; Ontology_term "GO:0015813" "GO:0015501"; Parent "gene-C7A06_RS00595"; gbkey "CDS"; gene "gltS"; go_function "glutamate:sodium symporter activity|0015501||IEA"; go_process "L-glutamate transmembrane transport|0015813||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312556.1"; locus_tag "C7A06_RS00595"; product "sodium/glutamate symporter"; protein_id "WP_000468836.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
804 NZ_CP027599.1 Protein Homology CDS 107161 108366 . + 0 gene_id "nbis-gene-93"; transcript_id "gene-C7A06_RS00595"; Dbxref "Genbank:WP_000468836.1"; ID "cds-WP_000468836.1"; Name "WP_000468836.1"; Ontology_term "GO:0015813" "GO:0015501"; Parent "gene-C7A06_RS00595"; gbkey "CDS"; gene "gltS"; go_function "glutamate:sodium symporter activity|0015501||IEA"; go_process "L-glutamate transmembrane transport|0015813||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312556.1"; locus_tag "C7A06_RS00595"; product "sodium/glutamate symporter"; protein_id "WP_000468836.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
805 NZ_CP027599.1 RefSeq gene 108369 109235 . + . gene_id "nbis-gene-94"; ID "nbis-gene-94"; Name "C7A06_RS00600"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00600";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
806 NZ_CP027599.1 RefSeq transcript 108369 109235 . + . gene_id "nbis-gene-94"; transcript_id "gene-C7A06_RS00600"; ID "gene-C7A06_RS00600"; Name "C7A06_RS00600"; Parent "nbis-gene-94"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00600"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
807 NZ_CP027599.1 Protein Homology exon 108369 109235 . + . gene_id "nbis-gene-94"; transcript_id "gene-C7A06_RS00600"; Dbxref "Genbank:WP_000747329.1"; ID "nbis-exon-102"; Name "WP_000747329.1"; Parent "gene-C7A06_RS00600"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312555.2"; locus_tag "C7A06_RS00600"; product "hypothetical protein"; protein_id "WP_000747329.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
808 NZ_CP027599.1 Protein Homology CDS 108369 109235 . + 0 gene_id "nbis-gene-94"; transcript_id "gene-C7A06_RS00600"; Dbxref "Genbank:WP_000747329.1"; ID "cds-WP_000747329.1"; Name "WP_000747329.1"; Parent "gene-C7A06_RS00600"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312555.2"; locus_tag "C7A06_RS00600"; product "hypothetical protein"; protein_id "WP_000747329.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
809 NZ_CP027599.1 RefSeq gene 109220 111301 . - . gene_id "nbis-gene-95"; ID "nbis-gene-95"; Name "recG"; gbkey "Gene"; gene "recG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00605";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
810 NZ_CP027599.1 RefSeq transcript 109220 111301 . - . gene_id "nbis-gene-95"; transcript_id "gene-C7A06_RS00605"; ID "gene-C7A06_RS00605"; Name "recG"; Parent "nbis-gene-95"; gbkey "Gene"; gene "recG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00605"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
811 NZ_CP027599.1 Protein Homology exon 109220 111301 . - . gene_id "nbis-gene-95"; transcript_id "gene-C7A06_RS00605"; Dbxref "Genbank:WP_000678419.1"; ID "nbis-exon-103"; Name "WP_000678419.1"; Ontology_term "GO:0006281" "GO:0006310" "GO:0003676" "GO:0003678" "GO:0005524"; Parent "gene-C7A06_RS00605"; gbkey "CDS"; gene "recG"; go_function "nucleic acid binding|0003676||IEA" "DNA helicase activity|0003678||IEA" "ATP binding|0005524||IEA"; go_process "DNA repair|0006281||IEA" "DNA recombination|0006310||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418109.1"; locus_tag "C7A06_RS00605"; product "ATP-dependent DNA helicase RecG"; protein_id "WP_000678419.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
812 NZ_CP027599.1 Protein Homology CDS 109220 111301 . - 0 gene_id "nbis-gene-95"; transcript_id "gene-C7A06_RS00605"; Dbxref "Genbank:WP_000678419.1"; ID "cds-WP_000678419.1"; Name "WP_000678419.1"; Ontology_term "GO:0006281" "GO:0006310" "GO:0003676" "GO:0003678" "GO:0005524"; Parent "gene-C7A06_RS00605"; gbkey "CDS"; gene "recG"; go_function "nucleic acid binding|0003676||IEA" "DNA helicase activity|0003678||IEA" "ATP binding|0005524||IEA"; go_process "DNA repair|0006281||IEA" "DNA recombination|0006310||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418109.1"; locus_tag "C7A06_RS00605"; product "ATP-dependent DNA helicase RecG"; protein_id "WP_000678419.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
813 NZ_CP027599.1 RefSeq gene 111307 111996 . - . gene_id "nbis-gene-96"; ID "nbis-gene-96"; Name "trmH"; gbkey "Gene"; gene "trmH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00610";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
814 NZ_CP027599.1 RefSeq transcript 111307 111996 . - . gene_id "nbis-gene-96"; transcript_id "gene-C7A06_RS00610"; ID "gene-C7A06_RS00610"; Name "trmH"; Parent "nbis-gene-96"; gbkey "Gene"; gene "trmH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00610"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
815 NZ_CP027599.1 Protein Homology exon 111307 111996 . - . gene_id "nbis-gene-96"; transcript_id "gene-C7A06_RS00610"; Dbxref "Genbank:WP_001070177.1"; ID "nbis-exon-104"; Name "WP_001070177.1"; Ontology_term "GO:0030488" "GO:0008173" "GO:0009020"; Parent "gene-C7A06_RS00610"; gbkey "CDS"; gene "trmH"; go_function "RNA methyltransferase activity|0008173||IEA" "tRNA (guanosine-2'-O-)-methyltransferase activity|0009020||IEA"; go_process "tRNA methylation|0030488||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418108.1"; locus_tag "C7A06_RS00610"; product "tRNA (guanosine(18)-2'-O)-methyltransferase TrmH"; protein_id "WP_001070177.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
816 NZ_CP027599.1 Protein Homology CDS 111307 111996 . - 0 gene_id "nbis-gene-96"; transcript_id "gene-C7A06_RS00610"; Dbxref "Genbank:WP_001070177.1"; ID "cds-WP_001070177.1"; Name "WP_001070177.1"; Ontology_term "GO:0030488" "GO:0008173" "GO:0009020"; Parent "gene-C7A06_RS00610"; gbkey "CDS"; gene "trmH"; go_function "RNA methyltransferase activity|0008173||IEA" "tRNA (guanosine-2'-O-)-methyltransferase activity|0009020||IEA"; go_process "tRNA methylation|0030488||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418108.1"; locus_tag "C7A06_RS00610"; product "tRNA (guanosine(18)-2'-O)-methyltransferase TrmH"; protein_id "WP_001070177.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
817 NZ_CP027599.1 RefSeq gene 112003 114111 . - . gene_id "nbis-gene-97"; ID "nbis-gene-97"; Name "spoT"; gbkey "Gene"; gene "spoT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00615";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
818 NZ_CP027599.1 RefSeq transcript 112003 114111 . - . gene_id "nbis-gene-97"; transcript_id "gene-C7A06_RS00615"; ID "gene-C7A06_RS00615"; Name "spoT"; Parent "nbis-gene-97"; gbkey "Gene"; gene "spoT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00615"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
819 NZ_CP027599.1 Protein Homology exon 112003 114111 . - . gene_id "nbis-gene-97"; transcript_id "gene-C7A06_RS00615"; Dbxref "Genbank:WP_000280488.1"; ID "nbis-exon-105"; Name "WP_000280488.1"; Ontology_term "GO:0015969" "GO:0008728" "GO:0008893"; Parent "gene-C7A06_RS00615"; gbkey "CDS"; gene "spoT"; go_function "GTP diphosphokinase activity|0008728||IEA" "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA"; go_process "guanosine tetraphosphate metabolic process|0015969||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312552.1"; locus_tag "C7A06_RS00615"; product "bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase"; protein_id "WP_000280488.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
820 NZ_CP027599.1 Protein Homology CDS 112003 114111 . - 0 gene_id "nbis-gene-97"; transcript_id "gene-C7A06_RS00615"; Dbxref "Genbank:WP_000280488.1"; ID "cds-WP_000280488.1"; Name "WP_000280488.1"; Ontology_term "GO:0015969" "GO:0008728" "GO:0008893"; Parent "gene-C7A06_RS00615"; gbkey "CDS"; gene "spoT"; go_function "GTP diphosphokinase activity|0008728||IEA" "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA"; go_process "guanosine tetraphosphate metabolic process|0015969||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312552.1"; locus_tag "C7A06_RS00615"; product "bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase"; protein_id "WP_000280488.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
821 NZ_CP027599.1 RefSeq gene 114130 114405 . - . gene_id "nbis-gene-98"; ID "nbis-gene-98"; Name "rpoZ"; gbkey "Gene"; gene "rpoZ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00620";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
822 NZ_CP027599.1 RefSeq transcript 114130 114405 . - . gene_id "nbis-gene-98"; transcript_id "gene-C7A06_RS00620"; ID "gene-C7A06_RS00620"; Name "rpoZ"; Parent "nbis-gene-98"; gbkey "Gene"; gene "rpoZ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00620"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
823 NZ_CP027599.1 Protein Homology exon 114130 114405 . - . gene_id "nbis-gene-98"; transcript_id "gene-C7A06_RS00620"; Dbxref "Genbank:WP_000135058.1"; ID "nbis-exon-106"; Name "WP_000135058.1"; Ontology_term "GO:0006351" "GO:0003899" "GO:0000345"; Parent "gene-C7A06_RS00620"; gbkey "CDS"; gene "rpoZ"; go_component "cytosolic DNA-directed RNA polymerase complex|0000345||IEA"; go_function "DNA-directed 5'-3' RNA polymerase activity|0003899||IEA"; go_process "transcription, DNA-templated|0006351||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1"; locus_tag "C7A06_RS00620"; product "DNA-directed RNA polymerase subunit omega"; protein_id "WP_000135058.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
824 NZ_CP027599.1 Protein Homology CDS 114130 114405 . - 0 gene_id "nbis-gene-98"; transcript_id "gene-C7A06_RS00620"; Dbxref "Genbank:WP_000135058.1"; ID "cds-WP_000135058.1"; Name "WP_000135058.1"; Ontology_term "GO:0006351" "GO:0003899" "GO:0000345"; Parent "gene-C7A06_RS00620"; gbkey "CDS"; gene "rpoZ"; go_component "cytosolic DNA-directed RNA polymerase complex|0000345||IEA"; go_function "DNA-directed 5'-3' RNA polymerase activity|0003899||IEA"; go_process "transcription, DNA-templated|0006351||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1"; locus_tag "C7A06_RS00620"; product "DNA-directed RNA polymerase subunit omega"; protein_id "WP_000135058.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
825 NZ_CP027599.1 RefSeq gene 114460 115083 . - . gene_id "nbis-gene-99"; ID "nbis-gene-99"; Name "gmk"; gbkey "Gene"; gene "gmk"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00625";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
826 NZ_CP027599.1 RefSeq transcript 114460 115083 . - . gene_id "nbis-gene-99"; transcript_id "gene-C7A06_RS00625"; ID "gene-C7A06_RS00625"; Name "gmk"; Parent "nbis-gene-99"; gbkey "Gene"; gene "gmk"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00625"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
827 NZ_CP027599.1 Protein Homology exon 114460 115083 . - . gene_id "nbis-gene-99"; transcript_id "gene-C7A06_RS00625"; Dbxref "Genbank:WP_001295237.1"; ID "nbis-exon-107"; Name "WP_001295237.1"; Ontology_term "GO:0015949" "GO:0004385"; Parent "gene-C7A06_RS00625"; gbkey "CDS"; gene "gmk"; go_function "guanylate kinase activity|0004385||IEA"; go_process "nucleobase-containing small molecule interconversion|0015949||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1"; locus_tag "C7A06_RS00625"; product "guanylate kinase"; protein_id "WP_001295237.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
828 NZ_CP027599.1 Protein Homology CDS 114460 115083 . - 0 gene_id "nbis-gene-99"; transcript_id "gene-C7A06_RS00625"; Dbxref "Genbank:WP_001295237.1"; ID "cds-WP_001295237.1"; Name "WP_001295237.1"; Ontology_term "GO:0015949" "GO:0004385"; Parent "gene-C7A06_RS00625"; gbkey "CDS"; gene "gmk"; go_function "guanylate kinase activity|0004385||IEA"; go_process "nucleobase-containing small molecule interconversion|0015949||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1"; locus_tag "C7A06_RS00625"; product "guanylate kinase"; protein_id "WP_001295237.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
829 NZ_CP027599.1 RefSeq gene 115341 117023 . + . gene_id "nbis-gene-100"; ID "nbis-gene-100"; Name "ligB"; gbkey "Gene"; gene "ligB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00630";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
830 NZ_CP027599.1 RefSeq transcript 115341 117023 . + . gene_id "nbis-gene-100"; transcript_id "gene-C7A06_RS00630"; ID "gene-C7A06_RS00630"; Name "ligB"; Parent "nbis-gene-100"; gbkey "Gene"; gene "ligB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00630"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
831 NZ_CP027599.1 Protein Homology exon 115341 117023 . + . gene_id "nbis-gene-100"; transcript_id "gene-C7A06_RS00630"; Dbxref "Genbank:WP_001426185.1"; ID "nbis-exon-108"; Name "WP_001426185.1"; Ontology_term "GO:0006260" "GO:0006281" "GO:0003911"; Parent "gene-C7A06_RS00630"; gbkey "CDS"; gene "ligB"; go_function "DNA ligase (NAD+) activity|0003911||IEA"; go_process "DNA replication|0006260||IEA" "DNA repair|0006281||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312549.2"; locus_tag "C7A06_RS00630"; product "NAD-dependent DNA ligase LigB"; protein_id "WP_001426185.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
832 NZ_CP027599.1 Protein Homology CDS 115341 117023 . + 0 gene_id "nbis-gene-100"; transcript_id "gene-C7A06_RS00630"; Dbxref "Genbank:WP_001426185.1"; ID "cds-WP_001426185.1"; Name "WP_001426185.1"; Ontology_term "GO:0006260" "GO:0006281" "GO:0003911"; Parent "gene-C7A06_RS00630"; gbkey "CDS"; gene "ligB"; go_function "DNA ligase (NAD+) activity|0003911||IEA"; go_process "DNA replication|0006260||IEA" "DNA repair|0006281||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312549.2"; locus_tag "C7A06_RS00630"; product "NAD-dependent DNA ligase LigB"; protein_id "WP_001426185.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
833 NZ_CP027599.1 RefSeq gene 117020 117637 . - . gene_id "nbis-gene-101"; ID "nbis-gene-101"; Name "yicG"; gbkey "Gene"; gene "yicG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00635";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
834 NZ_CP027599.1 RefSeq transcript 117020 117637 . - . gene_id "nbis-gene-101"; transcript_id "gene-C7A06_RS00635"; ID "gene-C7A06_RS00635"; Name "yicG"; Parent "nbis-gene-101"; gbkey "Gene"; gene "yicG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00635"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
835 NZ_CP027599.1 Protein Homology exon 117020 117637 . - . gene_id "nbis-gene-101"; transcript_id "gene-C7A06_RS00635"; Dbxref "Genbank:WP_000924289.1"; ID "nbis-exon-109"; Name "WP_000924289.1"; Parent "gene-C7A06_RS00635"; gbkey "CDS"; gene "yicG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312548.2"; locus_tag "C7A06_RS00635"; product "trimeric intracellular cation channel family protein"; protein_id "WP_000924289.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
836 NZ_CP027599.1 Protein Homology CDS 117020 117637 . - 0 gene_id "nbis-gene-101"; transcript_id "gene-C7A06_RS00635"; Dbxref "Genbank:WP_000924289.1"; ID "cds-WP_000924289.1"; Name "WP_000924289.1"; Parent "gene-C7A06_RS00635"; gbkey "CDS"; gene "yicG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312548.2"; locus_tag "C7A06_RS00635"; product "trimeric intracellular cation channel family protein"; protein_id "WP_000924289.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
837 NZ_CP027599.1 RefSeq gene 117929 118753 . - . gene_id "nbis-gene-102"; ID "nbis-gene-102"; Name "dinD"; gbkey "Gene"; gene "dinD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00640";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
838 NZ_CP027599.1 RefSeq transcript 117929 118753 . - . gene_id "nbis-gene-102"; transcript_id "gene-C7A06_RS00640"; ID "gene-C7A06_RS00640"; Name "dinD"; Parent "nbis-gene-102"; gbkey "Gene"; gene "dinD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00640"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
839 NZ_CP027599.1 Protein Homology exon 117929 118753 . - . gene_id "nbis-gene-102"; transcript_id "gene-C7A06_RS00640"; Dbxref "Genbank:WP_001297374.1"; ID "nbis-exon-110"; Name "WP_001297374.1"; Parent "gene-C7A06_RS00640"; gbkey "CDS"; gene "dinD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312547.2"; locus_tag "C7A06_RS00640"; product "DNA damage-inducible protein D"; protein_id "WP_001297374.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
840 NZ_CP027599.1 Protein Homology CDS 117929 118753 . - 0 gene_id "nbis-gene-102"; transcript_id "gene-C7A06_RS00640"; Dbxref "Genbank:WP_001297374.1"; ID "cds-WP_001297374.1"; Name "WP_001297374.1"; Parent "gene-C7A06_RS00640"; gbkey "CDS"; gene "dinD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312547.2"; locus_tag "C7A06_RS00640"; product "DNA damage-inducible protein D"; protein_id "WP_001297374.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
841 NZ_CP027599.1 RefSeq gene 118974 119837 . - . gene_id "nbis-gene-103"; ID "nbis-gene-103"; Name "yicC"; gbkey "Gene"; gene "yicC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00645";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
842 NZ_CP027599.1 RefSeq transcript 118974 119837 . - . gene_id "nbis-gene-103"; transcript_id "gene-C7A06_RS00645"; ID "gene-C7A06_RS00645"; Name "yicC"; Parent "nbis-gene-103"; gbkey "Gene"; gene "yicC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00645"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
843 NZ_CP027599.1 Protein Homology exon 118974 119837 . - . gene_id "nbis-gene-103"; transcript_id "gene-C7A06_RS00645"; Dbxref "Genbank:WP_000621336.1"; ID "nbis-exon-111"; Name "WP_000621336.1"; Parent "gene-C7A06_RS00645"; gbkey "CDS"; gene "yicC"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1"; locus_tag "C7A06_RS00645"; product "YicC family protein"; protein_id "WP_000621336.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
844 NZ_CP027599.1 Protein Homology CDS 118974 119837 . - 0 gene_id "nbis-gene-103"; transcript_id "gene-C7A06_RS00645"; Dbxref "Genbank:WP_000621336.1"; ID "cds-WP_000621336.1"; Name "WP_000621336.1"; Parent "gene-C7A06_RS00645"; gbkey "CDS"; gene "yicC"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1"; locus_tag "C7A06_RS00645"; product "YicC family protein"; protein_id "WP_000621336.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
845 NZ_CP027599.1 RefSeq gene 119964 120680 . + . gene_id "nbis-gene-104"; ID "nbis-gene-104"; Name "rph"; gbkey "Gene"; gene "rph"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00655";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
846 NZ_CP027599.1 RefSeq transcript 119964 120680 . + . gene_id "nbis-gene-104"; transcript_id "gene-C7A06_RS00655"; ID "gene-C7A06_RS00655"; Name "rph"; Parent "nbis-gene-104"; gbkey "Gene"; gene "rph"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00655"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
847 NZ_CP027599.1 Protein Homology exon 119964 120680 . + . gene_id "nbis-gene-104"; transcript_id "gene-C7A06_RS00655"; Dbxref "Genbank:WP_001247089.1"; ID "nbis-exon-112"; Name "WP_001247089.1"; Ontology_term "GO:0008033" "GO:0004549"; Parent "gene-C7A06_RS00655"; gbkey "CDS"; gene "rph"; go_function "tRNA-specific ribonuclease activity|0004549||IEA"; go_process "tRNA processing|0008033||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1"; locus_tag "C7A06_RS00655"; product "ribonuclease PH"; protein_id "WP_001247089.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
848 NZ_CP027599.1 Protein Homology CDS 119964 120680 . + 0 gene_id "nbis-gene-104"; transcript_id "gene-C7A06_RS00655"; Dbxref "Genbank:WP_001247089.1"; ID "cds-WP_001247089.1"; Name "WP_001247089.1"; Ontology_term "GO:0008033" "GO:0004549"; Parent "gene-C7A06_RS00655"; gbkey "CDS"; gene "rph"; go_function "tRNA-specific ribonuclease activity|0004549||IEA"; go_process "tRNA processing|0008033||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1"; locus_tag "C7A06_RS00655"; product "ribonuclease PH"; protein_id "WP_001247089.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
849 NZ_CP027599.1 RefSeq gene 120746 121387 . + . gene_id "nbis-gene-105"; ID "nbis-gene-105"; Name "pyrE"; gbkey "Gene"; gene "pyrE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00660";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
850 NZ_CP027599.1 RefSeq transcript 120746 121387 . + . gene_id "nbis-gene-105"; transcript_id "gene-C7A06_RS00660"; ID "gene-C7A06_RS00660"; Name "pyrE"; Parent "nbis-gene-105"; gbkey "Gene"; gene "pyrE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00660"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
851 NZ_CP027599.1 Protein Homology exon 120746 121387 . + . gene_id "nbis-gene-105"; transcript_id "gene-C7A06_RS00660"; Dbxref "Genbank:WP_000806161.1"; ID "nbis-exon-113"; Name "WP_000806161.1"; Ontology_term "GO:0009220" "GO:0004588"; Parent "gene-C7A06_RS00660"; gbkey "CDS"; gene "pyrE"; go_function "orotate phosphoribosyltransferase activity|0004588||IEA"; go_process "pyrimidine ribonucleotide biosynthetic process|0009220||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312544.1"; locus_tag "C7A06_RS00660"; product "orotate phosphoribosyltransferase"; protein_id "WP_000806161.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
852 NZ_CP027599.1 Protein Homology CDS 120746 121387 . + 0 gene_id "nbis-gene-105"; transcript_id "gene-C7A06_RS00660"; Dbxref "Genbank:WP_000806161.1"; ID "cds-WP_000806161.1"; Name "WP_000806161.1"; Ontology_term "GO:0009220" "GO:0004588"; Parent "gene-C7A06_RS00660"; gbkey "CDS"; gene "pyrE"; go_function "orotate phosphoribosyltransferase activity|0004588||IEA"; go_process "pyrimidine ribonucleotide biosynthetic process|0009220||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312544.1"; locus_tag "C7A06_RS00660"; product "orotate phosphoribosyltransferase"; protein_id "WP_000806161.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
853 NZ_CP027599.1 RefSeq gene 121424 122020 . - . gene_id "nbis-gene-106"; ID "nbis-gene-106"; Name "slmA"; gbkey "Gene"; gene "slmA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00665";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
854 NZ_CP027599.1 RefSeq transcript 121424 122020 . - . gene_id "nbis-gene-106"; transcript_id "gene-C7A06_RS00665"; ID "gene-C7A06_RS00665"; Name "slmA"; Parent "nbis-gene-106"; gbkey "Gene"; gene "slmA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00665"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
855 NZ_CP027599.1 Protein Homology exon 121424 122020 . - . gene_id "nbis-gene-106"; transcript_id "gene-C7A06_RS00665"; Dbxref "Genbank:WP_000818601.1"; ID "nbis-exon-114"; Name "WP_000818601.1"; Ontology_term "GO:0010974" "GO:0003677"; Parent "gene-C7A06_RS00665"; gbkey "CDS"; gene "slmA"; go_function "DNA binding|0003677||IEA"; go_process "negative regulation of division septum assembly|0010974||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1"; locus_tag "C7A06_RS00665"; product "nucleoid occlusion factor SlmA"; protein_id "WP_000818601.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
856 NZ_CP027599.1 Protein Homology CDS 121424 122020 . - 0 gene_id "nbis-gene-106"; transcript_id "gene-C7A06_RS00665"; Dbxref "Genbank:WP_000818601.1"; ID "cds-WP_000818601.1"; Name "WP_000818601.1"; Ontology_term "GO:0010974" "GO:0003677"; Parent "gene-C7A06_RS00665"; gbkey "CDS"; gene "slmA"; go_function "DNA binding|0003677||IEA"; go_process "negative regulation of division septum assembly|0010974||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1"; locus_tag "C7A06_RS00665"; product "nucleoid occlusion factor SlmA"; protein_id "WP_000818601.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
857 NZ_CP027599.1 RefSeq gene 122127 122585 . - . gene_id "nbis-gene-107"; ID "nbis-gene-107"; Name "dut"; gbkey "Gene"; gene "dut"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00670";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
858 NZ_CP027599.1 RefSeq transcript 122127 122585 . - . gene_id "nbis-gene-107"; transcript_id "gene-C7A06_RS00670"; ID "gene-C7A06_RS00670"; Name "dut"; Parent "nbis-gene-107"; gbkey "Gene"; gene "dut"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00670"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
859 NZ_CP027599.1 Protein Homology exon 122127 122585 . - . gene_id "nbis-gene-107"; transcript_id "gene-C7A06_RS00670"; Dbxref "Genbank:WP_000976070.1"; ID "nbis-exon-115"; Name "WP_000976070.1"; Ontology_term "GO:0006226" "GO:0046081" "GO:0000287" "GO:0004170"; Parent "gene-C7A06_RS00670"; gbkey "CDS"; gene "dut"; go_function "magnesium ion binding|0000287||IEA" "dUTP diphosphatase activity|0004170||IEA"; go_process "dUMP biosynthetic process|0006226||IEA" "dUTP catabolic process|0046081||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1"; locus_tag "C7A06_RS00670"; product "dUTP diphosphatase"; protein_id "WP_000976070.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
860 NZ_CP027599.1 Protein Homology CDS 122127 122585 . - 0 gene_id "nbis-gene-107"; transcript_id "gene-C7A06_RS00670"; Dbxref "Genbank:WP_000976070.1"; ID "cds-WP_000976070.1"; Name "WP_000976070.1"; Ontology_term "GO:0006226" "GO:0046081" "GO:0000287" "GO:0004170"; Parent "gene-C7A06_RS00670"; gbkey "CDS"; gene "dut"; go_function "magnesium ion binding|0000287||IEA" "dUTP diphosphatase activity|0004170||IEA"; go_process "dUMP biosynthetic process|0006226||IEA" "dUTP catabolic process|0046081||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1"; locus_tag "C7A06_RS00670"; product "dUTP diphosphatase"; protein_id "WP_000976070.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
861 NZ_CP027599.1 RefSeq gene 122563 123783 . - . gene_id "nbis-gene-108"; ID "nbis-gene-108"; Name "coaBC"; gbkey "Gene"; gene "coaBC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00675";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
862 NZ_CP027599.1 RefSeq transcript 122563 123783 . - . gene_id "nbis-gene-108"; transcript_id "gene-C7A06_RS00675"; ID "gene-C7A06_RS00675"; Name "coaBC"; Parent "nbis-gene-108"; gbkey "Gene"; gene "coaBC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00675"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
863 NZ_CP027599.1 Protein Homology exon 122563 123783 . - . gene_id "nbis-gene-108"; transcript_id "gene-C7A06_RS00675"; Dbxref "Genbank:WP_000050139.1"; ID "nbis-exon-116"; Name "WP_000050139.1"; Ontology_term "GO:0015937" "GO:0015939" "GO:0004632" "GO:0004633"; Parent "gene-C7A06_RS00675"; gbkey "CDS"; gene "coaBC"; go_function "phosphopantothenate--cysteine ligase activity|0004632||IEA" "phosphopantothenoylcysteine decarboxylase activity|0004633||IEA"; go_process "coenzyme A biosynthetic process|0015937||IEA" "pantothenate metabolic process|0015939||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418096.4"; locus_tag "C7A06_RS00675"; product "bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC"; protein_id "WP_000050139.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
864 NZ_CP027599.1 Protein Homology CDS 122563 123783 . - 0 gene_id "nbis-gene-108"; transcript_id "gene-C7A06_RS00675"; Dbxref "Genbank:WP_000050139.1"; ID "cds-WP_000050139.1"; Name "WP_000050139.1"; Ontology_term "GO:0015937" "GO:0015939" "GO:0004632" "GO:0004633"; Parent "gene-C7A06_RS00675"; gbkey "CDS"; gene "coaBC"; go_function "phosphopantothenate--cysteine ligase activity|0004632||IEA" "phosphopantothenoylcysteine decarboxylase activity|0004633||IEA"; go_process "coenzyme A biosynthetic process|0015937||IEA" "pantothenate metabolic process|0015939||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418096.4"; locus_tag "C7A06_RS00675"; product "bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC"; protein_id "WP_000050139.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
865 NZ_CP027599.1 RefSeq gene 123955 124623 . + . gene_id "nbis-gene-109"; ID "nbis-gene-109"; Name "radC"; gbkey "Gene"; gene "radC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00680";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
866 NZ_CP027599.1 RefSeq transcript 123955 124623 . + . gene_id "nbis-gene-109"; transcript_id "gene-C7A06_RS00680"; ID "gene-C7A06_RS00680"; Name "radC"; Parent "nbis-gene-109"; gbkey "Gene"; gene "radC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00680"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
867 NZ_CP027599.1 Protein Homology exon 123955 124623 . + . gene_id "nbis-gene-109"; transcript_id "gene-C7A06_RS00680"; Dbxref "Genbank:WP_001297375.1"; ID "nbis-exon-117"; Name "WP_001297375.1"; Ontology_term "GO:0006281" "GO:0003677"; Parent "gene-C7A06_RS00680"; gbkey "CDS"; gene "radC"; go_function "DNA binding|0003677||IEA"; go_process "DNA repair|0006281||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709417.4"; locus_tag "C7A06_RS00680"; product "DNA repair protein RadC"; protein_id "WP_001297375.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
868 NZ_CP027599.1 Protein Homology CDS 123955 124623 . + 0 gene_id "nbis-gene-109"; transcript_id "gene-C7A06_RS00680"; Dbxref "Genbank:WP_001297375.1"; ID "cds-WP_001297375.1"; Name "WP_001297375.1"; Ontology_term "GO:0006281" "GO:0003677"; Parent "gene-C7A06_RS00680"; gbkey "CDS"; gene "radC"; go_function "DNA binding|0003677||IEA"; go_process "DNA repair|0006281||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709417.4"; locus_tag "C7A06_RS00680"; product "DNA repair protein RadC"; protein_id "WP_001297375.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
869 NZ_CP027599.1 RefSeq gene 124840 125076 . + . gene_id "nbis-gene-110"; ID "nbis-gene-110"; Name "rpmB"; gbkey "Gene"; gene "rpmB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00685";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
870 NZ_CP027599.1 RefSeq transcript 124840 125076 . + . gene_id "nbis-gene-110"; transcript_id "gene-C7A06_RS00685"; ID "gene-C7A06_RS00685"; Name "rpmB"; Parent "nbis-gene-110"; gbkey "Gene"; gene "rpmB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00685"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
871 NZ_CP027599.1 Protein Homology exon 124840 125076 . + . gene_id "nbis-gene-110"; transcript_id "gene-C7A06_RS00685"; Dbxref "Genbank:WP_000091955.1"; ID "nbis-exon-118"; Name "WP_000091955.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000311" "GO:0022625"; Parent "gene-C7A06_RS00685"; gbkey "CDS"; gene "rpmB"; go_component "plastid large ribosomal subunit|0000311||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1"; locus_tag "C7A06_RS00685"; product "50S ribosomal protein L28"; protein_id "WP_000091955.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
872 NZ_CP027599.1 Protein Homology CDS 124840 125076 . + 0 gene_id "nbis-gene-110"; transcript_id "gene-C7A06_RS00685"; Dbxref "Genbank:WP_000091955.1"; ID "cds-WP_000091955.1"; Name "WP_000091955.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000311" "GO:0022625"; Parent "gene-C7A06_RS00685"; gbkey "CDS"; gene "rpmB"; go_component "plastid large ribosomal subunit|0000311||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1"; locus_tag "C7A06_RS00685"; product "50S ribosomal protein L28"; protein_id "WP_000091955.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
873 NZ_CP027599.1 RefSeq gene 125097 125264 . + . gene_id "nbis-gene-111"; ID "nbis-gene-111"; Name "rpmG"; gbkey "Gene"; gene "rpmG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00690";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
874 NZ_CP027599.1 RefSeq transcript 125097 125264 . + . gene_id "nbis-gene-111"; transcript_id "gene-C7A06_RS00690"; ID "gene-C7A06_RS00690"; Name "rpmG"; Parent "nbis-gene-111"; gbkey "Gene"; gene "rpmG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00690"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
875 NZ_CP027599.1 Protein Homology exon 125097 125264 . + . gene_id "nbis-gene-111"; transcript_id "gene-C7A06_RS00690"; Dbxref "Genbank:WP_001051798.1"; ID "nbis-exon-119"; Name "WP_001051798.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS00690"; gbkey "CDS"; gene "rpmG"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1"; locus_tag "C7A06_RS00690"; product "50S ribosomal protein L33"; protein_id "WP_001051798.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
876 NZ_CP027599.1 Protein Homology CDS 125097 125264 . + 0 gene_id "nbis-gene-111"; transcript_id "gene-C7A06_RS00690"; Dbxref "Genbank:WP_001051798.1"; ID "cds-WP_001051798.1"; Name "WP_001051798.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS00690"; gbkey "CDS"; gene "rpmG"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1"; locus_tag "C7A06_RS00690"; product "50S ribosomal protein L33"; protein_id "WP_001051798.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
877 NZ_CP027599.1 RefSeq gene 125362 126171 . + . gene_id "nbis-gene-112"; ID "nbis-gene-112"; Name "mutM"; gbkey "Gene"; gene "mutM"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00695";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
878 NZ_CP027599.1 RefSeq transcript 125362 126171 . + . gene_id "nbis-gene-112"; transcript_id "gene-C7A06_RS00695"; ID "gene-C7A06_RS00695"; Name "mutM"; Parent "nbis-gene-112"; gbkey "Gene"; gene "mutM"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00695"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
879 NZ_CP027599.1 Protein Homology exon 125362 126171 . + . gene_id "nbis-gene-112"; transcript_id "gene-C7A06_RS00695"; Dbxref "Genbank:WP_001114533.1"; ID "nbis-exon-120"; Name "WP_001114533.1"; Ontology_term "GO:0006281" "GO:0006284" "GO:0003676" "GO:0003684" "GO:0003906" "GO:0008534" "GO:0016799" "GO:0019104"; Parent "gene-C7A06_RS00695"; gbkey "CDS"; gene "mutM"; go_function "nucleic acid binding|0003676||IEA" "damaged DNA binding|0003684||IEA" "DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA" "oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA" "hydrolase activity, hydrolyzing N-glycosyl compounds|0016799||IEA" "DNA N-glycosylase activity|0019104||IEA"; go_process "DNA repair|0006281||IEA" "base-excision repair|0006284||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312537.1"; locus_tag "C7A06_RS00695"; product "bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase"; protein_id "WP_001114533.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
880 NZ_CP027599.1 Protein Homology CDS 125362 126171 . + 0 gene_id "nbis-gene-112"; transcript_id "gene-C7A06_RS00695"; Dbxref "Genbank:WP_001114533.1"; ID "cds-WP_001114533.1"; Name "WP_001114533.1"; Ontology_term "GO:0006281" "GO:0006284" "GO:0003676" "GO:0003684" "GO:0003906" "GO:0008534" "GO:0016799" "GO:0019104"; Parent "gene-C7A06_RS00695"; gbkey "CDS"; gene "mutM"; go_function "nucleic acid binding|0003676||IEA" "damaged DNA binding|0003684||IEA" "DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA" "oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA" "hydrolase activity, hydrolyzing N-glycosyl compounds|0016799||IEA" "DNA N-glycosylase activity|0019104||IEA"; go_process "DNA repair|0006281||IEA" "base-excision repair|0006284||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312537.1"; locus_tag "C7A06_RS00695"; product "bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase"; protein_id "WP_001114533.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
881 NZ_CP027599.1 RefSeq gene 126210 126689 . - . gene_id "nbis-gene-113"; ID "nbis-gene-113"; Name "coaD"; gbkey "Gene"; gene "coaD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00700";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
882 NZ_CP027599.1 RefSeq transcript 126210 126689 . - . gene_id "nbis-gene-113"; transcript_id "gene-C7A06_RS00700"; ID "gene-C7A06_RS00700"; Name "coaD"; Parent "nbis-gene-113"; gbkey "Gene"; gene "coaD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00700"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
883 NZ_CP027599.1 Protein Homology exon 126210 126689 . - . gene_id "nbis-gene-113"; transcript_id "gene-C7A06_RS00700"; Dbxref "Genbank:WP_001171866.1"; ID "nbis-exon-121"; Name "WP_001171866.1"; Ontology_term "GO:0015937" "GO:0004595"; Parent "gene-C7A06_RS00700"; gbkey "CDS"; gene "coaD"; go_function "pantetheine-phosphate adenylyltransferase activity|0004595||IEA"; go_process "coenzyme A biosynthetic process|0015937||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312536.1"; locus_tag "C7A06_RS00700"; product "pantetheine-phosphate adenylyltransferase"; protein_id "WP_001171866.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
884 NZ_CP027599.1 Protein Homology CDS 126210 126689 . - 0 gene_id "nbis-gene-113"; transcript_id "gene-C7A06_RS00700"; Dbxref "Genbank:WP_001171866.1"; ID "cds-WP_001171866.1"; Name "WP_001171866.1"; Ontology_term "GO:0015937" "GO:0004595"; Parent "gene-C7A06_RS00700"; gbkey "CDS"; gene "coaD"; go_function "pantetheine-phosphate adenylyltransferase activity|0004595||IEA"; go_process "coenzyme A biosynthetic process|0015937||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312536.1"; locus_tag "C7A06_RS00700"; product "pantetheine-phosphate adenylyltransferase"; protein_id "WP_001171866.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
885 NZ_CP027599.1 RefSeq gene 126697 127974 . - . gene_id "nbis-gene-114"; ID "nbis-gene-114"; Name "waaA"; gbkey "Gene"; gene "waaA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00705";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
886 NZ_CP027599.1 RefSeq transcript 126697 127974 . - . gene_id "nbis-gene-114"; transcript_id "gene-C7A06_RS00705"; ID "gene-C7A06_RS00705"; Name "waaA"; Parent "nbis-gene-114"; gbkey "Gene"; gene "waaA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00705"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
887 NZ_CP027599.1 Protein Homology exon 126697 127974 . - . gene_id "nbis-gene-114"; transcript_id "gene-C7A06_RS00705"; Dbxref "Genbank:WP_000891564.1"; ID "nbis-exon-122"; Name "WP_000891564.1"; Ontology_term "GO:0016740"; Parent "gene-C7A06_RS00705"; gbkey "CDS"; gene "waaA"; go_function "transferase activity|0016740||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312535.1"; locus_tag "C7A06_RS00705"; product "lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase"; protein_id "WP_000891564.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
888 NZ_CP027599.1 Protein Homology CDS 126697 127974 . - 0 gene_id "nbis-gene-114"; transcript_id "gene-C7A06_RS00705"; Dbxref "Genbank:WP_000891564.1"; ID "cds-WP_000891564.1"; Name "WP_000891564.1"; Ontology_term "GO:0016740"; Parent "gene-C7A06_RS00705"; gbkey "CDS"; gene "waaA"; go_function "transferase activity|0016740||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312535.1"; locus_tag "C7A06_RS00705"; product "lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase"; protein_id "WP_000891564.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
889 NZ_CP027599.1 RefSeq gene 128387 129445 . + . gene_id "nbis-gene-115"; ID "nbis-gene-115"; Name "rfaQ"; gbkey "Gene"; gene "rfaQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00710";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
890 NZ_CP027599.1 RefSeq transcript 128387 129445 . + . gene_id "nbis-gene-115"; transcript_id "gene-C7A06_RS00710"; ID "gene-C7A06_RS00710"; Name "rfaQ"; Parent "nbis-gene-115"; gbkey "Gene"; gene "rfaQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00710"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
891 NZ_CP027599.1 Protein Homology exon 128387 129445 . + . gene_id "nbis-gene-115"; transcript_id "gene-C7A06_RS00710"; Dbxref "Genbank:WP_000360406.1"; ID "nbis-exon-123"; Name "WP_000360406.1"; Ontology_term "GO:0016757"; Parent "gene-C7A06_RS00710"; gbkey "CDS"; gene "rfaQ"; go_function "glycosyltransferase activity|0016757||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709409.1"; locus_tag "C7A06_RS00710"; product "lipopolysaccharide core heptosyltransferase RfaQ"; protein_id "WP_000360406.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
892 NZ_CP027599.1 Protein Homology CDS 128387 129445 . + 0 gene_id "nbis-gene-115"; transcript_id "gene-C7A06_RS00710"; Dbxref "Genbank:WP_000360406.1"; ID "cds-WP_000360406.1"; Name "WP_000360406.1"; Ontology_term "GO:0016757"; Parent "gene-C7A06_RS00710"; gbkey "CDS"; gene "rfaQ"; go_function "glycosyltransferase activity|0016757||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709409.1"; locus_tag "C7A06_RS00710"; product "lipopolysaccharide core heptosyltransferase RfaQ"; protein_id "WP_000360406.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
893 NZ_CP027599.1 RefSeq gene 129442 130566 . + . gene_id "nbis-gene-116"; ID "nbis-gene-116"; Name "waaG"; gbkey "Gene"; gene "waaG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00715";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
894 NZ_CP027599.1 RefSeq transcript 129442 130566 . + . gene_id "nbis-gene-116"; transcript_id "gene-C7A06_RS00715"; ID "gene-C7A06_RS00715"; Name "waaG"; Parent "nbis-gene-116"; gbkey "Gene"; gene "waaG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00715"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
895 NZ_CP027599.1 Protein Homology exon 129442 130566 . + . gene_id "nbis-gene-116"; transcript_id "gene-C7A06_RS00715"; Dbxref "Genbank:WP_000634240.1"; ID "nbis-exon-124"; Name "WP_000634240.1"; Parent "gene-C7A06_RS00715"; gbkey "CDS"; gene "waaG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312533.1"; locus_tag "C7A06_RS00715"; product "glycosyltransferase family 4 protein"; protein_id "WP_000634240.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
896 NZ_CP027599.1 Protein Homology CDS 129442 130566 . + 0 gene_id "nbis-gene-116"; transcript_id "gene-C7A06_RS00715"; Dbxref "Genbank:WP_000634240.1"; ID "cds-WP_000634240.1"; Name "WP_000634240.1"; Parent "gene-C7A06_RS00715"; gbkey "CDS"; gene "waaG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312533.1"; locus_tag "C7A06_RS00715"; product "glycosyltransferase family 4 protein"; protein_id "WP_000634240.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
897 NZ_CP027599.1 RefSeq gene 130559 131356 . + . gene_id "nbis-gene-117"; ID "nbis-gene-117"; Name "rfaP"; gbkey "Gene"; gene "rfaP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00720";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
898 NZ_CP027599.1 RefSeq transcript 130559 131356 . + . gene_id "nbis-gene-117"; transcript_id "gene-C7A06_RS00720"; ID "gene-C7A06_RS00720"; Name "rfaP"; Parent "nbis-gene-117"; gbkey "Gene"; gene "rfaP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00720"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
899 NZ_CP027599.1 Protein Homology exon 130559 131356 . + . gene_id "nbis-gene-117"; transcript_id "gene-C7A06_RS00720"; Dbxref "Genbank:WP_001341761.1"; ID "nbis-exon-125"; Name "WP_001341761.1"; Ontology_term "GO:0009103" "GO:0016301"; Parent "gene-C7A06_RS00720"; gbkey "CDS"; gene "rfaP"; go_function "kinase activity|0016301||IEA"; go_process "lipopolysaccharide biosynthetic process|0009103||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312532.2"; locus_tag "C7A06_RS00720"; product "lipopolysaccharide core heptose(I) kinase RfaP"; protein_id "WP_001341761.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
900 NZ_CP027599.1 Protein Homology CDS 130559 131356 . + 0 gene_id "nbis-gene-117"; transcript_id "gene-C7A06_RS00720"; Dbxref "Genbank:WP_001341761.1"; ID "cds-WP_001341761.1"; Name "WP_001341761.1"; Ontology_term "GO:0009103" "GO:0016301"; Parent "gene-C7A06_RS00720"; gbkey "CDS"; gene "rfaP"; go_function "kinase activity|0016301||IEA"; go_process "lipopolysaccharide biosynthetic process|0009103||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312532.2"; locus_tag "C7A06_RS00720"; product "lipopolysaccharide core heptose(I) kinase RfaP"; protein_id "WP_001341761.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
901 NZ_CP027599.1 RefSeq gene 131399 132406 . + . gene_id "nbis-gene-118"; ID "nbis-gene-118"; Name "waaO"; gbkey "Gene"; gene "waaO"; gene_biotype "protein_coding"; gene_synonym "rfaI"; locus_tag "C7A06_RS00725";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
902 NZ_CP027599.1 RefSeq transcript 131399 132406 . + . gene_id "nbis-gene-118"; transcript_id "gene-C7A06_RS00725"; ID "gene-C7A06_RS00725"; Name "waaO"; Parent "nbis-gene-118"; gbkey "Gene"; gene "waaO"; gene_biotype "protein_coding"; gene_synonym "rfaI"; locus_tag "C7A06_RS00725"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
903 NZ_CP027599.1 Protein Homology exon 131399 132406 . + . gene_id "nbis-gene-118"; transcript_id "gene-C7A06_RS00725"; Dbxref "Genbank:WP_000080643.1"; ID "nbis-exon-126"; Name "WP_000080643.1"; Ontology_term "GO:0009103" "GO:0008918"; Parent "gene-C7A06_RS00725"; gbkey "CDS"; gene "waaO"; go_function "lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA"; go_process "lipopolysaccharide biosynthetic process|0009103||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001521942.1"; locus_tag "C7A06_RS00725"; product "lipopolysaccharide 3-alpha-galactosyltransferase"; protein_id "WP_000080643.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
904 NZ_CP027599.1 Protein Homology CDS 131399 132406 . + 0 gene_id "nbis-gene-118"; transcript_id "gene-C7A06_RS00725"; Dbxref "Genbank:WP_000080643.1"; ID "cds-WP_000080643.1"; Name "WP_000080643.1"; Ontology_term "GO:0009103" "GO:0008918"; Parent "gene-C7A06_RS00725"; gbkey "CDS"; gene "waaO"; go_function "lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA"; go_process "lipopolysaccharide biosynthetic process|0009103||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001521942.1"; locus_tag "C7A06_RS00725"; product "lipopolysaccharide 3-alpha-galactosyltransferase"; protein_id "WP_000080643.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
905 NZ_CP027599.1 RefSeq gene 132432 133139 . + . gene_id "nbis-gene-119"; ID "nbis-gene-119"; Name "rfaY"; gbkey "Gene"; gene "rfaY"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00730";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
906 NZ_CP027599.1 RefSeq transcript 132432 133139 . + . gene_id "nbis-gene-119"; transcript_id "gene-C7A06_RS00730"; ID "gene-C7A06_RS00730"; Name "rfaY"; Parent "nbis-gene-119"; gbkey "Gene"; gene "rfaY"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00730"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
907 NZ_CP027599.1 Protein Homology exon 132432 133139 . + . gene_id "nbis-gene-119"; transcript_id "gene-C7A06_RS00730"; Dbxref "Genbank:WP_000639946.1"; ID "nbis-exon-127"; Name "WP_000639946.1"; Parent "gene-C7A06_RS00730"; gbkey "CDS"; gene "rfaY"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709405.1"; locus_tag "C7A06_RS00730"; product "lipopolysaccharide core heptose(II) kinase RfaY"; protein_id "WP_000639946.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
908 NZ_CP027599.1 Protein Homology CDS 132432 133139 . + 0 gene_id "nbis-gene-119"; transcript_id "gene-C7A06_RS00730"; Dbxref "Genbank:WP_000639946.1"; ID "cds-WP_000639946.1"; Name "WP_000639946.1"; Parent "gene-C7A06_RS00730"; gbkey "CDS"; gene "rfaY"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709405.1"; locus_tag "C7A06_RS00730"; product "lipopolysaccharide core heptose(II) kinase RfaY"; protein_id "WP_000639946.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
909 NZ_CP027599.1 RefSeq gene 133164 134177 . + . gene_id "nbis-gene-120"; ID "nbis-gene-120"; Name "C7A06_RS00735"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00735";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
910 NZ_CP027599.1 RefSeq transcript 133164 134177 . + . gene_id "nbis-gene-120"; transcript_id "gene-C7A06_RS00735"; ID "gene-C7A06_RS00735"; Name "C7A06_RS00735"; Parent "nbis-gene-120"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00735"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
911 NZ_CP027599.1 Protein Homology exon 133164 134177 . + . gene_id "nbis-gene-120"; transcript_id "gene-C7A06_RS00735"; Dbxref "Genbank:WP_000346017.1"; ID "nbis-exon-128"; Name "WP_000346017.1"; Parent "gene-C7A06_RS00735"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312529.1"; locus_tag "C7A06_RS00735"; product "UDP-glucose--(galactosyl) LPS alpha1,2-glucosyltransferase"; protein_id "WP_000346017.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
912 NZ_CP027599.1 Protein Homology CDS 133164 134177 . + 0 gene_id "nbis-gene-120"; transcript_id "gene-C7A06_RS00735"; Dbxref "Genbank:WP_000346017.1"; ID "cds-WP_000346017.1"; Name "WP_000346017.1"; Parent "gene-C7A06_RS00735"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312529.1"; locus_tag "C7A06_RS00735"; product "UDP-glucose--(galactosyl) LPS alpha1,2-glucosyltransferase"; protein_id "WP_000346017.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
913 NZ_CP027599.1 RefSeq gene 134186 135328 . + . gene_id "nbis-gene-121"; ID "nbis-gene-121"; Name "C7A06_RS00740"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00740";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
914 NZ_CP027599.1 RefSeq transcript 134186 135328 . + . gene_id "nbis-gene-121"; transcript_id "gene-C7A06_RS00740"; ID "gene-C7A06_RS00740"; Name "C7A06_RS00740"; Parent "nbis-gene-121"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00740"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
915 NZ_CP027599.1 Protein Homology exon 134186 135328 . + . gene_id "nbis-gene-121"; transcript_id "gene-C7A06_RS00740"; Dbxref "Genbank:WP_000227812.1"; ID "nbis-exon-129"; Name "WP_000227812.1"; Parent "gene-C7A06_RS00740"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312528.1"; locus_tag "C7A06_RS00740"; product "lipopolysaccharide N-acetylglucosaminyltransferase"; protein_id "WP_000227812.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
916 NZ_CP027599.1 Protein Homology CDS 134186 135328 . + 0 gene_id "nbis-gene-121"; transcript_id "gene-C7A06_RS00740"; Dbxref "Genbank:WP_000227812.1"; ID "cds-WP_000227812.1"; Name "WP_000227812.1"; Parent "gene-C7A06_RS00740"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312528.1"; locus_tag "C7A06_RS00740"; product "lipopolysaccharide N-acetylglucosaminyltransferase"; protein_id "WP_000227812.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
917 NZ_CP027599.1 RefSeq gene 135364 136572 . - . gene_id "nbis-gene-122"; ID "nbis-gene-122"; Name "rfaL"; gbkey "Gene"; gene "rfaL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00745";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
918 NZ_CP027599.1 RefSeq transcript 135364 136572 . - . gene_id "nbis-gene-122"; transcript_id "gene-C7A06_RS00745"; ID "gene-C7A06_RS00745"; Name "rfaL"; Parent "nbis-gene-122"; gbkey "Gene"; gene "rfaL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00745"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
919 NZ_CP027599.1 Protein Homology exon 135364 136572 . - . gene_id "nbis-gene-122"; transcript_id "gene-C7A06_RS00745"; Dbxref "Genbank:WP_000204742.1"; ID "nbis-exon-130"; Name "WP_000204742.1"; Parent "gene-C7A06_RS00745"; gbkey "CDS"; gene "rfaL"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312527.1"; locus_tag "C7A06_RS00745"; product "O-antigen ligase RfaL"; protein_id "WP_000204742.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
920 NZ_CP027599.1 Protein Homology CDS 135364 136572 . - 0 gene_id "nbis-gene-122"; transcript_id "gene-C7A06_RS00745"; Dbxref "Genbank:WP_000204742.1"; ID "cds-WP_000204742.1"; Name "WP_000204742.1"; Parent "gene-C7A06_RS00745"; gbkey "CDS"; gene "rfaL"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312527.1"; locus_tag "C7A06_RS00745"; product "O-antigen ligase RfaL"; protein_id "WP_000204742.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
921 NZ_CP027599.1 RefSeq gene 136569 137561 . - . gene_id "nbis-gene-123"; ID "nbis-gene-123"; Name "rfaC"; gbkey "Gene"; gene "rfaC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00750";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
922 NZ_CP027599.1 RefSeq transcript 136569 137561 . - . gene_id "nbis-gene-123"; transcript_id "gene-C7A06_RS00750"; ID "gene-C7A06_RS00750"; Name "rfaC"; Parent "nbis-gene-123"; gbkey "Gene"; gene "rfaC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00750"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
923 NZ_CP027599.1 Protein Homology exon 136569 137561 . - . gene_id "nbis-gene-123"; transcript_id "gene-C7A06_RS00750"; Dbxref "Genbank:WP_001264565.1"; ID "nbis-exon-131"; Name "WP_001264565.1"; Ontology_term "GO:0009244" "GO:0008920"; Parent "gene-C7A06_RS00750"; gbkey "CDS"; gene "rfaC"; go_function "lipopolysaccharide heptosyltransferase activity|0008920||IEA"; go_process "lipopolysaccharide core region biosynthetic process|0009244||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312526.1"; locus_tag "C7A06_RS00750"; product "lipopolysaccharide heptosyltransferase RfaC"; protein_id "WP_001264565.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
924 NZ_CP027599.1 Protein Homology CDS 136569 137561 . - 0 gene_id "nbis-gene-123"; transcript_id "gene-C7A06_RS00750"; Dbxref "Genbank:WP_001264565.1"; ID "cds-WP_001264565.1"; Name "WP_001264565.1"; Ontology_term "GO:0009244" "GO:0008920"; Parent "gene-C7A06_RS00750"; gbkey "CDS"; gene "rfaC"; go_function "lipopolysaccharide heptosyltransferase activity|0008920||IEA"; go_process "lipopolysaccharide core region biosynthetic process|0009244||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312526.1"; locus_tag "C7A06_RS00750"; product "lipopolysaccharide heptosyltransferase RfaC"; protein_id "WP_001264565.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
925 NZ_CP027599.1 RefSeq gene 137565 138611 . - . gene_id "nbis-gene-124"; ID "nbis-gene-124"; Name "rfaF"; gbkey "Gene"; gene "rfaF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00755";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
926 NZ_CP027599.1 RefSeq transcript 137565 138611 . - . gene_id "nbis-gene-124"; transcript_id "gene-C7A06_RS00755"; ID "gene-C7A06_RS00755"; Name "rfaF"; Parent "nbis-gene-124"; gbkey "Gene"; gene "rfaF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00755"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
927 NZ_CP027599.1 Protein Homology exon 137565 138611 . - . gene_id "nbis-gene-124"; transcript_id "gene-C7A06_RS00755"; Dbxref "Genbank:WP_000699219.1"; ID "nbis-exon-132"; Name "WP_000699219.1"; Ontology_term "GO:0009103" "GO:0016757"; Parent "gene-C7A06_RS00755"; gbkey "CDS"; gene "rfaF"; go_function "glycosyltransferase activity|0016757||IEA"; go_process "lipopolysaccharide biosynthetic process|0009103||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418077.1"; locus_tag "C7A06_RS00755"; product "ADP-heptose--LPS heptosyltransferase RfaF"; protein_id "WP_000699219.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
928 NZ_CP027599.1 Protein Homology CDS 137565 138611 . - 0 gene_id "nbis-gene-124"; transcript_id "gene-C7A06_RS00755"; Dbxref "Genbank:WP_000699219.1"; ID "cds-WP_000699219.1"; Name "WP_000699219.1"; Ontology_term "GO:0009103" "GO:0016757"; Parent "gene-C7A06_RS00755"; gbkey "CDS"; gene "rfaF"; go_function "glycosyltransferase activity|0016757||IEA"; go_process "lipopolysaccharide biosynthetic process|0009103||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418077.1"; locus_tag "C7A06_RS00755"; product "ADP-heptose--LPS heptosyltransferase RfaF"; protein_id "WP_000699219.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
929 NZ_CP027599.1 RefSeq gene 138621 139553 . - . gene_id "nbis-gene-125"; ID "nbis-gene-125"; Name "rfaD"; gbkey "Gene"; gene "rfaD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00760";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
930 NZ_CP027599.1 RefSeq transcript 138621 139553 . - . gene_id "nbis-gene-125"; transcript_id "gene-C7A06_RS00760"; ID "gene-C7A06_RS00760"; Name "rfaD"; Parent "nbis-gene-125"; gbkey "Gene"; gene "rfaD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00760"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
931 NZ_CP027599.1 Protein Homology exon 138621 139553 . - . gene_id "nbis-gene-125"; transcript_id "gene-C7A06_RS00760"; Dbxref "Genbank:WP_000587764.1"; ID "nbis-exon-133"; Name "WP_000587764.1"; Ontology_term "GO:0005975" "GO:0008712"; Parent "gene-C7A06_RS00760"; gbkey "CDS"; gene "rfaD"; go_function "ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA"; go_process "carbohydrate metabolic process|0005975||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1"; locus_tag "C7A06_RS00760"; product "ADP-glyceromanno-heptose 6-epimerase"; protein_id "WP_000587764.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
932 NZ_CP027599.1 Protein Homology CDS 138621 139553 . - 0 gene_id "nbis-gene-125"; transcript_id "gene-C7A06_RS00760"; Dbxref "Genbank:WP_000587764.1"; ID "cds-WP_000587764.1"; Name "WP_000587764.1"; Ontology_term "GO:0005975" "GO:0008712"; Parent "gene-C7A06_RS00760"; gbkey "CDS"; gene "rfaD"; go_function "ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA"; go_process "carbohydrate metabolic process|0005975||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1"; locus_tag "C7A06_RS00760"; product "ADP-glyceromanno-heptose 6-epimerase"; protein_id "WP_000587764.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
933 NZ_CP027599.1 RefSeq gene 139857 140714 . + . gene_id "nbis-gene-126"; ID "nbis-gene-126"; Name "yibB"; gbkey "Gene"; gene "yibB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00765";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
934 NZ_CP027599.1 RefSeq transcript 139857 140714 . + . gene_id "nbis-gene-126"; transcript_id "gene-C7A06_RS00765"; ID "gene-C7A06_RS00765"; Name "yibB"; Parent "nbis-gene-126"; gbkey "Gene"; gene "yibB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00765"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
935 NZ_CP027599.1 Protein Homology exon 139857 140714 . + . gene_id "nbis-gene-126"; transcript_id "gene-C7A06_RS00765"; Dbxref "Genbank:WP_000842823.1"; ID "nbis-exon-134"; Name "WP_000842823.1"; Parent "gene-C7A06_RS00765"; gbkey "CDS"; gene "yibB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418075.2"; locus_tag "C7A06_RS00765"; product "protein YibB"; protein_id "WP_000842823.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
936 NZ_CP027599.1 Protein Homology CDS 139857 140714 . + 0 gene_id "nbis-gene-126"; transcript_id "gene-C7A06_RS00765"; Dbxref "Genbank:WP_000842823.1"; ID "cds-WP_000842823.1"; Name "WP_000842823.1"; Parent "gene-C7A06_RS00765"; gbkey "CDS"; gene "yibB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418075.2"; locus_tag "C7A06_RS00765"; product "protein YibB"; protein_id "WP_000842823.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
937 NZ_CP027599.1 RefSeq gene 140989 142185 . + . gene_id "nbis-gene-127"; ID "nbis-gene-127"; Name "kbl"; gbkey "Gene"; gene "kbl"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00770";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
938 NZ_CP027599.1 RefSeq transcript 140989 142185 . + . gene_id "nbis-gene-127"; transcript_id "gene-C7A06_RS00770"; ID "gene-C7A06_RS00770"; Name "kbl"; Parent "nbis-gene-127"; gbkey "Gene"; gene "kbl"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00770"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
939 NZ_CP027599.1 Protein Homology exon 140989 142185 . + . gene_id "nbis-gene-127"; transcript_id "gene-C7A06_RS00770"; Dbxref "Genbank:WP_001213834.1"; ID "nbis-exon-135"; Name "WP_001213834.1"; Ontology_term "GO:0006567" "GO:0008890"; Parent "gene-C7A06_RS00770"; gbkey "CDS"; gene "kbl"; go_function "glycine C-acetyltransferase activity|0008890||IEA"; go_process "threonine catabolic process|0006567||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1"; locus_tag "C7A06_RS00770"; product "glycine C-acetyltransferase"; protein_id "WP_001213834.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
940 NZ_CP027599.1 Protein Homology CDS 140989 142185 . + 0 gene_id "nbis-gene-127"; transcript_id "gene-C7A06_RS00770"; Dbxref "Genbank:WP_001213834.1"; ID "cds-WP_001213834.1"; Name "WP_001213834.1"; Ontology_term "GO:0006567" "GO:0008890"; Parent "gene-C7A06_RS00770"; gbkey "CDS"; gene "kbl"; go_function "glycine C-acetyltransferase activity|0008890||IEA"; go_process "threonine catabolic process|0006567||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1"; locus_tag "C7A06_RS00770"; product "glycine C-acetyltransferase"; protein_id "WP_001213834.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
941 NZ_CP027599.1 RefSeq gene 142195 143220 . + . gene_id "nbis-gene-128"; ID "nbis-gene-128"; Name "tdh"; gbkey "Gene"; gene "tdh"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00775";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
942 NZ_CP027599.1 RefSeq transcript 142195 143220 . + . gene_id "nbis-gene-128"; transcript_id "gene-C7A06_RS00775"; ID "gene-C7A06_RS00775"; Name "tdh"; Parent "nbis-gene-128"; gbkey "Gene"; gene "tdh"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00775"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
943 NZ_CP027599.1 Protein Homology exon 142195 143220 . + . gene_id "nbis-gene-128"; transcript_id "gene-C7A06_RS00775"; Dbxref "Genbank:WP_000646014.1"; ID "nbis-exon-136"; Name "WP_000646014.1"; Ontology_term "GO:0006567" "GO:0008743"; Parent "gene-C7A06_RS00775"; gbkey "CDS"; gene "tdh"; go_function "L-threonine 3-dehydrogenase activity|0008743||IEA"; go_process "threonine catabolic process|0006567||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1"; locus_tag "C7A06_RS00775"; product "L-threonine 3-dehydrogenase"; protein_id "WP_000646014.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
944 NZ_CP027599.1 Protein Homology CDS 142195 143220 . + 0 gene_id "nbis-gene-128"; transcript_id "gene-C7A06_RS00775"; Dbxref "Genbank:WP_000646014.1"; ID "cds-WP_000646014.1"; Name "WP_000646014.1"; Ontology_term "GO:0006567" "GO:0008743"; Parent "gene-C7A06_RS00775"; gbkey "CDS"; gene "tdh"; go_function "L-threonine 3-dehydrogenase activity|0008743||IEA"; go_process "threonine catabolic process|0006567||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1"; locus_tag "C7A06_RS00775"; product "L-threonine 3-dehydrogenase"; protein_id "WP_000646014.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
945 NZ_CP027599.1 RefSeq gene 143472 144506 . + . gene_id "nbis-gene-129"; ID "nbis-gene-129"; Name "waaH"; gbkey "Gene"; gene "waaH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00780";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
946 NZ_CP027599.1 RefSeq transcript 143472 144506 . + . gene_id "nbis-gene-129"; transcript_id "gene-C7A06_RS00780"; ID "gene-C7A06_RS00780"; Name "waaH"; Parent "nbis-gene-129"; gbkey "Gene"; gene "waaH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00780"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
947 NZ_CP027599.1 Protein Homology exon 143472 144506 . + . gene_id "nbis-gene-129"; transcript_id "gene-C7A06_RS00780"; Dbxref "Genbank:WP_000982091.1"; ID "nbis-exon-137"; Name "WP_000982091.1"; Parent "gene-C7A06_RS00780"; gbkey "CDS"; gene "waaH"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418072.1"; locus_tag "C7A06_RS00780"; product "UDP-glucuronate:LPS(HepIII) glycosyltransferase"; protein_id "WP_000982091.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
948 NZ_CP027599.1 Protein Homology CDS 143472 144506 . + 0 gene_id "nbis-gene-129"; transcript_id "gene-C7A06_RS00780"; Dbxref "Genbank:WP_000982091.1"; ID "cds-WP_000982091.1"; Name "WP_000982091.1"; Parent "gene-C7A06_RS00780"; gbkey "CDS"; gene "waaH"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418072.1"; locus_tag "C7A06_RS00780"; product "UDP-glucuronate:LPS(HepIII) glycosyltransferase"; protein_id "WP_000982091.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
949 NZ_CP027599.1 RefSeq gene 144493 145452 . - . gene_id "nbis-gene-130"; ID "nbis-gene-130"; Name "yibQ"; gbkey "Gene"; gene "yibQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00785";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
950 NZ_CP027599.1 RefSeq transcript 144493 145452 . - . gene_id "nbis-gene-130"; transcript_id "gene-C7A06_RS00785"; ID "gene-C7A06_RS00785"; Name "yibQ"; Parent "nbis-gene-130"; gbkey "Gene"; gene "yibQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00785"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
951 NZ_CP027599.1 Protein Homology exon 144493 145452 . - . gene_id "nbis-gene-130"; transcript_id "gene-C7A06_RS00785"; Dbxref "Genbank:WP_000483865.1"; ID "nbis-exon-138"; Name "WP_000483865.1"; Parent "gene-C7A06_RS00785"; gbkey "CDS"; gene "yibQ"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312519.2"; locus_tag "C7A06_RS00785"; product "divergent polysaccharide deacetylase family protein"; protein_id "WP_000483865.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
952 NZ_CP027599.1 Protein Homology CDS 144493 145452 . - 0 gene_id "nbis-gene-130"; transcript_id "gene-C7A06_RS00785"; Dbxref "Genbank:WP_000483865.1"; ID "cds-WP_000483865.1"; Name "WP_000483865.1"; Parent "gene-C7A06_RS00785"; gbkey "CDS"; gene "yibQ"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312519.2"; locus_tag "C7A06_RS00785"; product "divergent polysaccharide deacetylase family protein"; protein_id "WP_000483865.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
953 NZ_CP027599.1 RefSeq gene 145456 146715 . - . gene_id "nbis-gene-131"; ID "nbis-gene-131"; Name "envC"; gbkey "Gene"; gene "envC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00790";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
954 NZ_CP027599.1 RefSeq transcript 145456 146715 . - . gene_id "nbis-gene-131"; transcript_id "gene-C7A06_RS00790"; ID "gene-C7A06_RS00790"; Name "envC"; Parent "nbis-gene-131"; gbkey "Gene"; gene "envC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00790"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
955 NZ_CP027599.1 Protein Homology exon 145456 146715 . - . gene_id "nbis-gene-131"; transcript_id "gene-C7A06_RS00790"; Dbxref "Genbank:WP_000196256.1"; ID "nbis-exon-139"; Name "WP_000196256.1"; Parent "gene-C7A06_RS00790"; gbkey "CDS"; gene "envC"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418070.6"; locus_tag "C7A06_RS00790"; product "murein hydrolase activator EnvC"; protein_id "WP_000196256.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
956 NZ_CP027599.1 Protein Homology CDS 145456 146715 . - 0 gene_id "nbis-gene-131"; transcript_id "gene-C7A06_RS00790"; Dbxref "Genbank:WP_000196256.1"; ID "cds-WP_000196256.1"; Name "WP_000196256.1"; Parent "gene-C7A06_RS00790"; gbkey "CDS"; gene "envC"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418070.6"; locus_tag "C7A06_RS00790"; product "murein hydrolase activator EnvC"; protein_id "WP_000196256.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
957 NZ_CP027599.1 RefSeq gene 146749 148293 . - . gene_id "nbis-gene-132"; ID "nbis-gene-132"; Name "gpmM"; gbkey "Gene"; gene "gpmM"; gene_biotype "protein_coding"; gene_synonym "pgmI"; locus_tag "C7A06_RS00795";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
958 NZ_CP027599.1 RefSeq transcript 146749 148293 . - . gene_id "nbis-gene-132"; transcript_id "gene-C7A06_RS00795"; ID "gene-C7A06_RS00795"; Name "gpmM"; Parent "nbis-gene-132"; gbkey "Gene"; gene "gpmM"; gene_biotype "protein_coding"; gene_synonym "pgmI"; locus_tag "C7A06_RS00795"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
959 NZ_CP027599.1 Protein Homology exon 146749 148293 . - . gene_id "nbis-gene-132"; transcript_id "gene-C7A06_RS00795"; Dbxref "Genbank:WP_000116566.1"; ID "nbis-exon-140"; Name "WP_000116566.1"; Ontology_term "GO:0006007" "GO:0004619"; Parent "gene-C7A06_RS00795"; gbkey "CDS"; gene "gpmM"; go_function "phosphoglycerate mutase activity|0004619||IEA"; go_process "glucose catabolic process|0006007||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312517.1"; locus_tag "C7A06_RS00795"; product "2,3-bisphosphoglycerate-independent phosphoglycerate mutase"; protein_id "WP_000116566.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
960 NZ_CP027599.1 Protein Homology CDS 146749 148293 . - 0 gene_id "nbis-gene-132"; transcript_id "gene-C7A06_RS00795"; Dbxref "Genbank:WP_000116566.1"; ID "cds-WP_000116566.1"; Name "WP_000116566.1"; Ontology_term "GO:0006007" "GO:0004619"; Parent "gene-C7A06_RS00795"; gbkey "CDS"; gene "gpmM"; go_function "phosphoglycerate mutase activity|0004619||IEA"; go_process "glucose catabolic process|0006007||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312517.1"; locus_tag "C7A06_RS00795"; product "2,3-bisphosphoglycerate-independent phosphoglycerate mutase"; protein_id "WP_000116566.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
961 NZ_CP027599.1 RefSeq gene 148538 148969 . + . gene_id "nbis-gene-133"; ID "nbis-gene-133"; Name "yibN"; gbkey "Gene"; gene "yibN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00805";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
962 NZ_CP027599.1 RefSeq transcript 148538 148969 . + . gene_id "nbis-gene-133"; transcript_id "gene-C7A06_RS00805"; ID "gene-C7A06_RS00805"; Name "yibN"; Parent "nbis-gene-133"; gbkey "Gene"; gene "yibN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00805"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
963 NZ_CP027599.1 Protein Homology exon 148538 148969 . + . gene_id "nbis-gene-133"; transcript_id "gene-C7A06_RS00805"; Dbxref "Genbank:WP_001156181.1"; ID "nbis-exon-141"; Name "WP_001156181.1"; Parent "gene-C7A06_RS00805"; gbkey "CDS"; gene "yibN"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312516.1"; locus_tag "C7A06_RS00805"; product "rhodanese-like domain-containing protein"; protein_id "WP_001156181.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
964 NZ_CP027599.1 Protein Homology CDS 148538 148969 . + 0 gene_id "nbis-gene-133"; transcript_id "gene-C7A06_RS00805"; Dbxref "Genbank:WP_001156181.1"; ID "cds-WP_001156181.1"; Name "WP_001156181.1"; Parent "gene-C7A06_RS00805"; gbkey "CDS"; gene "yibN"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312516.1"; locus_tag "C7A06_RS00805"; product "rhodanese-like domain-containing protein"; protein_id "WP_001156181.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
965 NZ_CP027599.1 RefSeq gene 149111 149362 . + . gene_id "nbis-gene-134"; ID "nbis-gene-134"; Name "grxC"; gbkey "Gene"; gene "grxC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00810";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
966 NZ_CP027599.1 RefSeq transcript 149111 149362 . + . gene_id "nbis-gene-134"; transcript_id "gene-C7A06_RS00810"; ID "gene-C7A06_RS00810"; Name "grxC"; Parent "nbis-gene-134"; gbkey "Gene"; gene "grxC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00810"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
967 NZ_CP027599.1 Protein Homology exon 149111 149362 . + . gene_id "nbis-gene-134"; transcript_id "gene-C7A06_RS00810"; Dbxref "Genbank:WP_000024392.1"; ID "nbis-exon-142"; Name "WP_000024392.1"; Parent "gene-C7A06_RS00810"; gbkey "CDS"; gene "grxC"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312515.1"; locus_tag "C7A06_RS00810"; product "glutaredoxin 3"; protein_id "WP_000024392.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
968 NZ_CP027599.1 Protein Homology CDS 149111 149362 . + 0 gene_id "nbis-gene-134"; transcript_id "gene-C7A06_RS00810"; Dbxref "Genbank:WP_000024392.1"; ID "cds-WP_000024392.1"; Name "WP_000024392.1"; Parent "gene-C7A06_RS00810"; gbkey "CDS"; gene "grxC"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312515.1"; locus_tag "C7A06_RS00810"; product "glutaredoxin 3"; protein_id "WP_000024392.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
969 NZ_CP027599.1 RefSeq gene 149425 149892 . + . gene_id "nbis-gene-135"; ID "nbis-gene-135"; Name "secB"; gbkey "Gene"; gene "secB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00815";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
970 NZ_CP027599.1 RefSeq transcript 149425 149892 . + . gene_id "nbis-gene-135"; transcript_id "gene-C7A06_RS00815"; ID "gene-C7A06_RS00815"; Name "secB"; Parent "nbis-gene-135"; gbkey "Gene"; gene "secB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00815"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
971 NZ_CP027599.1 Protein Homology exon 149425 149892 . + . gene_id "nbis-gene-135"; transcript_id "gene-C7A06_RS00815"; Dbxref "Genbank:WP_000003377.1"; ID "nbis-exon-143"; Name "WP_000003377.1"; Parent "gene-C7A06_RS00815"; gbkey "CDS"; gene "secB"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1"; locus_tag "C7A06_RS00815"; product "protein-export chaperone SecB"; protein_id "WP_000003377.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
972 NZ_CP027599.1 Protein Homology CDS 149425 149892 . + 0 gene_id "nbis-gene-135"; transcript_id "gene-C7A06_RS00815"; Dbxref "Genbank:WP_000003377.1"; ID "cds-WP_000003377.1"; Name "WP_000003377.1"; Parent "gene-C7A06_RS00815"; gbkey "CDS"; gene "secB"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1"; locus_tag "C7A06_RS00815"; product "protein-export chaperone SecB"; protein_id "WP_000003377.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
973 NZ_CP027599.1 RefSeq gene 149892 150911 . + . gene_id "nbis-gene-136"; ID "nbis-gene-136"; Name "gpsA"; gbkey "Gene"; gene "gpsA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00820";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
974 NZ_CP027599.1 RefSeq transcript 149892 150911 . + . gene_id "nbis-gene-136"; transcript_id "gene-C7A06_RS00820"; ID "gene-C7A06_RS00820"; Name "gpsA"; Parent "nbis-gene-136"; gbkey "Gene"; gene "gpsA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00820"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
975 NZ_CP027599.1 Protein Homology exon 149892 150911 . + . gene_id "nbis-gene-136"; transcript_id "gene-C7A06_RS00820"; Dbxref "Genbank:WP_001076194.1"; ID "nbis-exon-144"; Name "WP_001076194.1"; Ontology_term "GO:0006072" "GO:0004367"; Parent "gene-C7A06_RS00820"; gbkey "CDS"; gene "gpsA"; go_function "glycerol-3-phosphate dehydrogenase [NAD+] activity|0004367||IEA"; go_process "glycerol-3-phosphate metabolic process|0006072||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312513.1"; locus_tag "C7A06_RS00820"; product "NAD(P)H-dependent glycerol-3-phosphate dehydrogenase"; protein_id "WP_001076194.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
976 NZ_CP027599.1 Protein Homology CDS 149892 150911 . + 0 gene_id "nbis-gene-136"; transcript_id "gene-C7A06_RS00820"; Dbxref "Genbank:WP_001076194.1"; ID "cds-WP_001076194.1"; Name "WP_001076194.1"; Ontology_term "GO:0006072" "GO:0004367"; Parent "gene-C7A06_RS00820"; gbkey "CDS"; gene "gpsA"; go_function "glycerol-3-phosphate dehydrogenase [NAD+] activity|0004367||IEA"; go_process "glycerol-3-phosphate metabolic process|0006072||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312513.1"; locus_tag "C7A06_RS00820"; product "NAD(P)H-dependent glycerol-3-phosphate dehydrogenase"; protein_id "WP_001076194.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
977 NZ_CP027599.1 RefSeq gene 150991 151812 . + . gene_id "nbis-gene-137"; ID "nbis-gene-137"; Name "cysE"; gbkey "Gene"; gene "cysE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00825";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
978 NZ_CP027599.1 RefSeq transcript 150991 151812 . + . gene_id "nbis-gene-137"; transcript_id "gene-C7A06_RS00825"; ID "gene-C7A06_RS00825"; Name "cysE"; Parent "nbis-gene-137"; gbkey "Gene"; gene "cysE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00825"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
979 NZ_CP027599.1 Protein Homology exon 150991 151812 . + . gene_id "nbis-gene-137"; transcript_id "gene-C7A06_RS00825"; Dbxref "Genbank:WP_001277561.1"; ID "nbis-exon-145"; Name "WP_001277561.1"; Ontology_term "GO:0006535" "GO:0009001"; Parent "gene-C7A06_RS00825"; gbkey "CDS"; gene "cysE"; go_function "serine O-acetyltransferase activity|0009001||IEA"; go_process "cysteine biosynthetic process from serine|0006535||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1"; locus_tag "C7A06_RS00825"; product "serine O-acetyltransferase"; protein_id "WP_001277561.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
980 NZ_CP027599.1 Protein Homology CDS 150991 151812 . + 0 gene_id "nbis-gene-137"; transcript_id "gene-C7A06_RS00825"; Dbxref "Genbank:WP_001277561.1"; ID "cds-WP_001277561.1"; Name "WP_001277561.1"; Ontology_term "GO:0006535" "GO:0009001"; Parent "gene-C7A06_RS00825"; gbkey "CDS"; gene "cysE"; go_function "serine O-acetyltransferase activity|0009001||IEA"; go_process "cysteine biosynthetic process from serine|0006535||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1"; locus_tag "C7A06_RS00825"; product "serine O-acetyltransferase"; protein_id "WP_001277561.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
981 NZ_CP027599.1 RefSeq gene 151865 152338 . - . gene_id "nbis-gene-138"; ID "nbis-gene-138"; Name "trmL"; gbkey "Gene"; gene "trmL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00830";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
982 NZ_CP027599.1 RefSeq transcript 151865 152338 . - . gene_id "nbis-gene-138"; transcript_id "gene-C7A06_RS00830"; ID "gene-C7A06_RS00830"; Name "trmL"; Parent "nbis-gene-138"; gbkey "Gene"; gene "trmL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00830"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
983 NZ_CP027599.1 Protein Homology exon 151865 152338 . - . gene_id "nbis-gene-138"; transcript_id "gene-C7A06_RS00830"; Dbxref "Genbank:WP_000932342.1"; ID "nbis-exon-146"; Name "WP_000932342.1"; Ontology_term "GO:0001510" "GO:0008173"; Parent "gene-C7A06_RS00830"; gbkey "CDS"; gene "trmL"; go_function "RNA methyltransferase activity|0008173||IEA"; go_process "RNA methylation|0001510||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312511.1"; locus_tag "C7A06_RS00830"; product "tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL"; protein_id "WP_000932342.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
984 NZ_CP027599.1 Protein Homology CDS 151865 152338 . - 0 gene_id "nbis-gene-138"; transcript_id "gene-C7A06_RS00830"; Dbxref "Genbank:WP_000932342.1"; ID "cds-WP_000932342.1"; Name "WP_000932342.1"; Ontology_term "GO:0001510" "GO:0008173"; Parent "gene-C7A06_RS00830"; gbkey "CDS"; gene "trmL"; go_function "RNA methyltransferase activity|0008173||IEA"; go_process "RNA methylation|0001510||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312511.1"; locus_tag "C7A06_RS00830"; product "tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL"; protein_id "WP_000932342.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
985 NZ_CP027599.1 RefSeq gene 152524 153714 . - . gene_id "nbis-gene-139"; ID "nbis-gene-139"; Name "lldD"; gbkey "Gene"; gene "lldD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00835";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
986 NZ_CP027599.1 RefSeq transcript 152524 153714 . - . gene_id "nbis-gene-139"; transcript_id "gene-C7A06_RS00835"; ID "gene-C7A06_RS00835"; Name "lldD"; Parent "nbis-gene-139"; gbkey "Gene"; gene "lldD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00835"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
987 NZ_CP027599.1 Protein Homology exon 152524 153714 . - . gene_id "nbis-gene-139"; transcript_id "gene-C7A06_RS00835"; Dbxref "Genbank:WP_000586964.1"; ID "nbis-exon-147"; Name "WP_000586964.1"; Parent "gene-C7A06_RS00835"; gbkey "CDS"; gene "lldD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312510.1"; locus_tag "C7A06_RS00835"; product "quinone-dependent L-lactate dehydrogenase"; protein_id "WP_000586964.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
988 NZ_CP027599.1 Protein Homology CDS 152524 153714 . - 0 gene_id "nbis-gene-139"; transcript_id "gene-C7A06_RS00835"; Dbxref "Genbank:WP_000586964.1"; ID "cds-WP_000586964.1"; Name "WP_000586964.1"; Parent "gene-C7A06_RS00835"; gbkey "CDS"; gene "lldD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312510.1"; locus_tag "C7A06_RS00835"; product "quinone-dependent L-lactate dehydrogenase"; protein_id "WP_000586964.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
989 NZ_CP027599.1 RefSeq gene 153711 154487 . - . gene_id "nbis-gene-140"; ID "nbis-gene-140"; Name "lldR"; gbkey "Gene"; gene "lldR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00840";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
990 NZ_CP027599.1 RefSeq transcript 153711 154487 . - . gene_id "nbis-gene-140"; transcript_id "gene-C7A06_RS00840"; ID "gene-C7A06_RS00840"; Name "lldR"; Parent "nbis-gene-140"; gbkey "Gene"; gene "lldR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00840"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
991 NZ_CP027599.1 Protein Homology exon 153711 154487 . - . gene_id "nbis-gene-140"; transcript_id "gene-C7A06_RS00840"; Dbxref "Genbank:WP_000636500.1"; ID "nbis-exon-148"; Name "WP_000636500.1"; Ontology_term "GO:0006355" "GO:0003700"; Parent "gene-C7A06_RS00840"; gbkey "CDS"; gene "lldR"; go_function "DNA-binding transcription factor activity|0003700||IEA"; go_process "regulation of transcription, DNA-templated|0006355||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418061.1"; locus_tag "C7A06_RS00840"; product "transcriptional regulator LldR"; protein_id "WP_000636500.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
992 NZ_CP027599.1 Protein Homology CDS 153711 154487 . - 0 gene_id "nbis-gene-140"; transcript_id "gene-C7A06_RS00840"; Dbxref "Genbank:WP_000636500.1"; ID "cds-WP_000636500.1"; Name "WP_000636500.1"; Ontology_term "GO:0006355" "GO:0003700"; Parent "gene-C7A06_RS00840"; gbkey "CDS"; gene "lldR"; go_function "DNA-binding transcription factor activity|0003700||IEA"; go_process "regulation of transcription, DNA-templated|0006355||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418061.1"; locus_tag "C7A06_RS00840"; product "transcriptional regulator LldR"; protein_id "WP_000636500.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
993 NZ_CP027599.1 RefSeq gene 154487 156142 . - . gene_id "nbis-gene-141"; ID "nbis-gene-141"; Name "lldP"; gbkey "Gene"; gene "lldP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00845";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
994 NZ_CP027599.1 RefSeq transcript 154487 156142 . - . gene_id "nbis-gene-141"; transcript_id "gene-C7A06_RS00845"; ID "gene-C7A06_RS00845"; Name "lldP"; Parent "nbis-gene-141"; gbkey "Gene"; gene "lldP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00845"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
995 NZ_CP027599.1 Protein Homology exon 154487 156142 . - . gene_id "nbis-gene-141"; transcript_id "gene-C7A06_RS00845"; Dbxref "Genbank:WP_001297977.1"; ID "nbis-exon-149"; Name "WP_001297977.1"; Ontology_term "GO:0015727" "GO:0015129" "GO:0005887"; Parent "gene-C7A06_RS00845"; gbkey "CDS"; gene "lldP"; go_component "integral component of plasma membrane|0005887||IEA"; go_function "lactate transmembrane transporter activity|0015129||IEA"; go_process "lactate transport|0015727||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312508.1"; locus_tag "C7A06_RS00845"; product "L-lactate permease"; protein_id "WP_001297977.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
996 NZ_CP027599.1 Protein Homology CDS 154487 156142 . - 0 gene_id "nbis-gene-141"; transcript_id "gene-C7A06_RS00845"; Dbxref "Genbank:WP_001297977.1"; ID "cds-WP_001297977.1"; Name "WP_001297977.1"; Ontology_term "GO:0015727" "GO:0015129" "GO:0005887"; Parent "gene-C7A06_RS00845"; gbkey "CDS"; gene "lldP"; go_component "integral component of plasma membrane|0005887||IEA"; go_function "lactate transmembrane transporter activity|0015129||IEA"; go_process "lactate transport|0015727||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312508.1"; locus_tag "C7A06_RS00845"; product "L-lactate permease"; protein_id "WP_001297977.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
997 NZ_CP027599.1 RefSeq gene 156511 161361 . - . gene_id "nbis-gene-142"; ID "nbis-gene-142"; Name "ehaG"; gbkey "Gene"; gene "ehaG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00855";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
998 NZ_CP027599.1 RefSeq transcript 156511 161361 . - . gene_id "nbis-gene-142"; transcript_id "gene-C7A06_RS00855"; ID "gene-C7A06_RS00855"; Name "ehaG"; Parent "nbis-gene-142"; gbkey "Gene"; gene "ehaG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00855"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
999 NZ_CP027599.1 Protein Homology exon 156511 161361 . - . gene_id "nbis-gene-142"; transcript_id "gene-C7A06_RS00855"; Dbxref "Genbank:WP_001033225.1"; ID "nbis-exon-150"; Name "WP_001033225.1"; Parent "gene-C7A06_RS00855"; gbkey "CDS"; gene "ehaG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312507.1"; locus_tag "C7A06_RS00855"; product "trimeric autotransporter adhesin EhaG"; protein_id "WP_001033225.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1000 NZ_CP027599.1 Protein Homology CDS 156511 161361 . - 0 gene_id "nbis-gene-142"; transcript_id "gene-C7A06_RS00855"; Dbxref "Genbank:WP_001033225.1"; ID "cds-WP_001033225.1"; Name "WP_001033225.1"; Parent "gene-C7A06_RS00855"; gbkey "CDS"; gene "ehaG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312507.1"; locus_tag "C7A06_RS00855"; product "trimeric autotransporter adhesin EhaG"; protein_id "WP_001033225.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1001 NZ_CP027599.1 RefSeq gene 161361 162089 . - . gene_id "nbis-gene-143"; ID "nbis-gene-143"; Name "C7A06_RS00860"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00860";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1002 NZ_CP027599.1 RefSeq transcript 161361 162089 . - . gene_id "nbis-gene-143"; transcript_id "gene-C7A06_RS00860"; ID "gene-C7A06_RS00860"; Name "C7A06_RS00860"; Parent "nbis-gene-143"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00860"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1003 NZ_CP027599.1 Protein Homology exon 161361 162089 . - . gene_id "nbis-gene-143"; transcript_id "gene-C7A06_RS00860"; Dbxref "Genbank:WP_001049540.1"; ID "nbis-exon-151"; Name "WP_001049540.1"; Parent "gene-C7A06_RS00860"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001049551.1"; locus_tag "C7A06_RS00860"; product "DUF3251 domain-containing protein"; protein_id "WP_001049540.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1004 NZ_CP027599.1 Protein Homology CDS 161361 162089 . - 0 gene_id "nbis-gene-143"; transcript_id "gene-C7A06_RS00860"; Dbxref "Genbank:WP_001049540.1"; ID "cds-WP_001049540.1"; Name "WP_001049540.1"; Parent "gene-C7A06_RS00860"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001049551.1"; locus_tag "C7A06_RS00860"; product "DUF3251 domain-containing protein"; protein_id "WP_001049540.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1005 NZ_CP027599.1 RefSeq gene 162632 162994 . - . gene_id "nbis-gene-144"; ID "nbis-gene-144"; Name "yibL"; gbkey "Gene"; gene "yibL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00870";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1006 NZ_CP027599.1 RefSeq transcript 162632 162994 . - . gene_id "nbis-gene-144"; transcript_id "gene-C7A06_RS00870"; ID "gene-C7A06_RS00870"; Name "yibL"; Parent "nbis-gene-144"; gbkey "Gene"; gene "yibL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00870"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1007 NZ_CP027599.1 Protein Homology exon 162632 162994 . - . gene_id "nbis-gene-144"; transcript_id "gene-C7A06_RS00870"; Dbxref "Genbank:WP_000665680.1"; ID "nbis-exon-152"; Name "WP_000665680.1"; Parent "gene-C7A06_RS00870"; gbkey "CDS"; gene "yibL"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312505.1"; locus_tag "C7A06_RS00870"; product "YibL family ribosome-associated protein"; protein_id "WP_000665680.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1008 NZ_CP027599.1 Protein Homology CDS 162632 162994 . - 0 gene_id "nbis-gene-144"; transcript_id "gene-C7A06_RS00870"; Dbxref "Genbank:WP_000665680.1"; ID "cds-WP_000665680.1"; Name "WP_000665680.1"; Parent "gene-C7A06_RS00870"; gbkey "CDS"; gene "yibL"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312505.1"; locus_tag "C7A06_RS00870"; product "YibL family ribosome-associated protein"; protein_id "WP_000665680.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1009 NZ_CP027599.1 RefSeq gene 163279 163488 . + . gene_id "nbis-gene-145"; ID "nbis-gene-145"; Name "C7A06_RS00875"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00875";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1010 NZ_CP027599.1 RefSeq transcript 163279 163488 . + . gene_id "nbis-gene-145"; transcript_id "gene-C7A06_RS00875"; ID "gene-C7A06_RS00875"; Name "C7A06_RS00875"; Parent "nbis-gene-145"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00875"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1011 NZ_CP027599.1 Protein Homology exon 163279 163488 . + . gene_id "nbis-gene-145"; transcript_id "gene-C7A06_RS00875"; Dbxref "Genbank:WP_000517100.1"; ID "nbis-exon-153"; Name "WP_000517100.1"; Parent "gene-C7A06_RS00875"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_588470.1"; locus_tag "C7A06_RS00875"; product "hypothetical protein"; protein_id "WP_000517100.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1012 NZ_CP027599.1 Protein Homology CDS 163279 163488 . + 0 gene_id "nbis-gene-145"; transcript_id "gene-C7A06_RS00875"; Dbxref "Genbank:WP_000517100.1"; ID "cds-WP_000517100.1"; Name "WP_000517100.1"; Parent "gene-C7A06_RS00875"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_588470.1"; locus_tag "C7A06_RS00875"; product "hypothetical protein"; protein_id "WP_000517100.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1013 NZ_CP027599.1 RefSeq gene 163500 164087 . - . gene_id "nbis-gene-146"; ID "nbis-gene-146"; Name "mtlR"; gbkey "Gene"; gene "mtlR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00880";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1014 NZ_CP027599.1 RefSeq transcript 163500 164087 . - . gene_id "nbis-gene-146"; transcript_id "gene-C7A06_RS00880"; ID "gene-C7A06_RS00880"; Name "mtlR"; Parent "nbis-gene-146"; gbkey "Gene"; gene "mtlR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00880"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1015 NZ_CP027599.1 Protein Homology exon 163500 164087 . - . gene_id "nbis-gene-146"; transcript_id "gene-C7A06_RS00880"; Dbxref "Genbank:WP_000228271.1"; ID "nbis-exon-154"; Name "WP_000228271.1"; Parent "gene-C7A06_RS00880"; gbkey "CDS"; gene "mtlR"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312504.1"; locus_tag "C7A06_RS00880"; product "mannitol operon repressor MtlR"; protein_id "WP_000228271.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1016 NZ_CP027599.1 Protein Homology CDS 163500 164087 . - 0 gene_id "nbis-gene-146"; transcript_id "gene-C7A06_RS00880"; Dbxref "Genbank:WP_000228271.1"; ID "cds-WP_000228271.1"; Name "WP_000228271.1"; Parent "gene-C7A06_RS00880"; gbkey "CDS"; gene "mtlR"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312504.1"; locus_tag "C7A06_RS00880"; product "mannitol operon repressor MtlR"; protein_id "WP_000228271.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1017 NZ_CP027599.1 RefSeq gene 164087 165235 . - . gene_id "nbis-gene-147"; ID "nbis-gene-147"; Name "mtlD"; gbkey "Gene"; gene "mtlD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00885";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1018 NZ_CP027599.1 RefSeq transcript 164087 165235 . - . gene_id "nbis-gene-147"; transcript_id "gene-C7A06_RS00885"; ID "gene-C7A06_RS00885"; Name "mtlD"; Parent "nbis-gene-147"; gbkey "Gene"; gene "mtlD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00885"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1019 NZ_CP027599.1 Protein Homology exon 164087 165235 . - . gene_id "nbis-gene-147"; transcript_id "gene-C7A06_RS00885"; Dbxref "Genbank:WP_000645424.1"; ID "nbis-exon-155"; Name "WP_000645424.1"; Ontology_term "GO:0019594" "GO:0008926"; Parent "gene-C7A06_RS00885"; gbkey "CDS"; gene "mtlD"; go_function "mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA"; go_process "mannitol metabolic process|0019594||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709374.2"; locus_tag "C7A06_RS00885"; product "mannitol-1-phosphate 5-dehydrogenase"; protein_id "WP_000645424.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1020 NZ_CP027599.1 Protein Homology CDS 164087 165235 . - 0 gene_id "nbis-gene-147"; transcript_id "gene-C7A06_RS00885"; Dbxref "Genbank:WP_000645424.1"; ID "cds-WP_000645424.1"; Name "WP_000645424.1"; Ontology_term "GO:0019594" "GO:0008926"; Parent "gene-C7A06_RS00885"; gbkey "CDS"; gene "mtlD"; go_function "mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA"; go_process "mannitol metabolic process|0019594||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709374.2"; locus_tag "C7A06_RS00885"; product "mannitol-1-phosphate 5-dehydrogenase"; protein_id "WP_000645424.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1021 NZ_CP027599.1 RefSeq gene 165465 167378 . - . gene_id "nbis-gene-148"; ID "nbis-gene-148"; Name "mtlA"; gbkey "Gene"; gene "mtlA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00890";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1022 NZ_CP027599.1 RefSeq transcript 165465 167378 . - . gene_id "nbis-gene-148"; transcript_id "gene-C7A06_RS00890"; ID "gene-C7A06_RS00890"; Name "mtlA"; Parent "nbis-gene-148"; gbkey "Gene"; gene "mtlA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00890"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1023 NZ_CP027599.1 Protein Homology exon 165465 167378 . - . gene_id "nbis-gene-148"; transcript_id "gene-C7A06_RS00890"; Dbxref "Genbank:WP_000093261.1"; ID "nbis-exon-156"; Name "WP_000093261.1"; Parent "gene-C7A06_RS00890"; gbkey "CDS"; gene "mtlA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709373.1"; locus_tag "C7A06_RS00890"; product "PTS mannitol transporter subunit IICBA"; protein_id "WP_000093261.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1024 NZ_CP027599.1 Protein Homology CDS 165465 167378 . - 0 gene_id "nbis-gene-148"; transcript_id "gene-C7A06_RS00890"; Dbxref "Genbank:WP_000093261.1"; ID "cds-WP_000093261.1"; Name "WP_000093261.1"; Parent "gene-C7A06_RS00890"; gbkey "CDS"; gene "mtlA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709373.1"; locus_tag "C7A06_RS00890"; product "PTS mannitol transporter subunit IICBA"; protein_id "WP_000093261.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1025 NZ_CP027599.1 RefSeq gene 167915 168277 . + . gene_id "nbis-gene-149"; ID "nbis-gene-149"; Name "yibI"; gbkey "Gene"; gene "yibI"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00895";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1026 NZ_CP027599.1 RefSeq transcript 167915 168277 . + . gene_id "nbis-gene-149"; transcript_id "gene-C7A06_RS00895"; ID "gene-C7A06_RS00895"; Name "yibI"; Parent "nbis-gene-149"; gbkey "Gene"; gene "yibI"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00895"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1027 NZ_CP027599.1 Protein Homology exon 167915 168277 . + . gene_id "nbis-gene-149"; transcript_id "gene-C7A06_RS00895"; Dbxref "Genbank:WP_000479624.1"; ID "nbis-exon-157"; Name "WP_000479624.1"; Parent "gene-C7A06_RS00895"; gbkey "CDS"; gene "yibI"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418055.1"; locus_tag "C7A06_RS00895"; product "DUF3302 domain-containing protein"; protein_id "WP_000479624.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1028 NZ_CP027599.1 Protein Homology CDS 167915 168277 . + 0 gene_id "nbis-gene-149"; transcript_id "gene-C7A06_RS00895"; Dbxref "Genbank:WP_000479624.1"; ID "cds-WP_000479624.1"; Name "WP_000479624.1"; Parent "gene-C7A06_RS00895"; gbkey "CDS"; gene "yibI"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418055.1"; locus_tag "C7A06_RS00895"; product "DUF3302 domain-containing protein"; protein_id "WP_000479624.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1029 NZ_CP027599.1 RefSeq gene 168280 169346 . + . gene_id "nbis-pseudogene-9"; ID "nbis-pseudogene-9"; Name "yibH"; gbkey "Gene"; gene "yibH"; gene_biotype "pseudogene"; locus_tag "C7A06_RS00900"; original_biotype "pseudogene"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1030 NZ_CP027599.1 RefSeq transcript 168280 169346 . + . gene_id "nbis-pseudogene-9"; transcript_id "gene-C7A06_RS00900"; ID "gene-C7A06_RS00900"; Name "yibH"; Parent "nbis-pseudogene-9"; gbkey "Gene"; gene "yibH"; gene_biotype "pseudogene"; locus_tag "C7A06_RS00900"; original_biotype "mrna"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1031 NZ_CP027599.1 Protein Homology exon 168280 169346 . + . gene_id "nbis-pseudogene-9"; transcript_id "gene-C7A06_RS00900"; ID "nbis-exon-158"; Note "frameshifted"; Parent "gene-C7A06_RS00900"; gbkey "CDS"; gene "yibH"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312500.1"; locus_tag "C7A06_RS00900"; product "HlyD family secretion protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1032 NZ_CP027599.1 Protein Homology CDS 168280 169346 . + 0 gene_id "nbis-pseudogene-9"; transcript_id "gene-C7A06_RS00900"; ID "cds-C7A06_RS00900"; Note "frameshifted"; Parent "gene-C7A06_RS00900"; gbkey "CDS"; gene "yibH"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312500.1"; locus_tag "C7A06_RS00900"; product "HlyD family secretion protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1033 NZ_CP027599.1 RefSeq gene 169806 170315 . - . gene_id "nbis-gene-150"; ID "nbis-gene-150"; Name "C7A06_RS00905"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00905";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1034 NZ_CP027599.1 RefSeq transcript 169806 170315 . - . gene_id "nbis-gene-150"; transcript_id "gene-C7A06_RS00905"; ID "gene-C7A06_RS00905"; Name "C7A06_RS00905"; Parent "nbis-gene-150"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00905"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1035 NZ_CP027599.1 Protein Homology exon 169806 170315 . - . gene_id "nbis-gene-150"; transcript_id "gene-C7A06_RS00905"; Dbxref "Genbank:WP_236917825.1"; ID "nbis-exon-159"; Name "WP_236917825.1"; Parent "gene-C7A06_RS00905"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_016158939.1"; locus_tag "C7A06_RS00905"; product "Imm57 family immunity protein"; protein_id "WP_236917825.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1036 NZ_CP027599.1 Protein Homology CDS 169806 170315 . - 0 gene_id "nbis-gene-150"; transcript_id "gene-C7A06_RS00905"; Dbxref "Genbank:WP_236917825.1"; ID "cds-WP_236917825.1"; Name "WP_236917825.1"; Parent "gene-C7A06_RS00905"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_016158939.1"; locus_tag "C7A06_RS00905"; product "Imm57 family immunity protein"; protein_id "WP_236917825.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1037 NZ_CP027599.1 RefSeq gene 170950 171411 . - . gene_id "nbis-gene-151"; ID "nbis-gene-151"; Name "yibG"; gbkey "Gene"; gene "yibG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00920";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1038 NZ_CP027599.1 RefSeq transcript 170950 171411 . - . gene_id "nbis-gene-151"; transcript_id "gene-C7A06_RS00920"; ID "gene-C7A06_RS00920"; Name "yibG"; Parent "nbis-gene-151"; gbkey "Gene"; gene "yibG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00920"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1039 NZ_CP027599.1 Protein Homology exon 170950 171411 . - . gene_id "nbis-gene-151"; transcript_id "gene-C7A06_RS00920"; Dbxref "Genbank:WP_000642489.1"; ID "nbis-exon-160"; Name "WP_000642489.1"; Parent "gene-C7A06_RS00920"; gbkey "CDS"; gene "yibG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418053.1"; locus_tag "C7A06_RS00920"; product "sel1 repeat family protein"; protein_id "WP_000642489.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1040 NZ_CP027599.1 Protein Homology CDS 170950 171411 . - 0 gene_id "nbis-gene-151"; transcript_id "gene-C7A06_RS00920"; Dbxref "Genbank:WP_000642489.1"; ID "cds-WP_000642489.1"; Name "WP_000642489.1"; Parent "gene-C7A06_RS00920"; gbkey "CDS"; gene "yibG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418053.1"; locus_tag "C7A06_RS00920"; product "sel1 repeat family protein"; protein_id "WP_000642489.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1041 NZ_CP027599.1 RefSeq gene 171423 172381 . - . gene_id "nbis-pseudogene-281"; ID "nbis-pseudogene-281"; Name "C7A06_RS33910"; end_range "172381" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33910"; original_biotype "pseudogene"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1042 NZ_CP027599.1 RefSeq transcript 171423 172381 . - . gene_id "nbis-pseudogene-281"; transcript_id "gene-C7A06_RS33910"; ID "gene-C7A06_RS33910"; Name "C7A06_RS33910"; Parent "nbis-pseudogene-281"; end_range "172381" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS33910"; original_biotype "mrna"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1043 NZ_CP027599.1 Protein Homology exon 171423 172381 . - . gene_id "nbis-pseudogene-281"; transcript_id "gene-C7A06_RS33910"; ID "nbis-exon-5988"; Note "frameshifted; incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS33910"; end_range "172381" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312497.1"; locus_tag "C7A06_RS33910"; partial "true"; product "RHS domain-containing protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1044 NZ_CP027599.1 Protein Homology CDS 171423 172381 . - 0 gene_id "nbis-pseudogene-281"; transcript_id "gene-C7A06_RS33910"; ID "cds-C7A06_RS33910"; Note "frameshifted; incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS33910"; end_range "172381" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312497.1"; locus_tag "C7A06_RS33910"; partial "true"; product "RHS domain-containing protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1045 NZ_CP027599.1 RefSeq gene 172409 173251 . - . gene_id "nbis-gene-152"; ID "nbis-gene-152"; Name "yibA"; gbkey "Gene"; gene "yibA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00930";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1046 NZ_CP027599.1 RefSeq transcript 172409 173251 . - . gene_id "nbis-gene-152"; transcript_id "gene-C7A06_RS00930"; ID "gene-C7A06_RS00930"; Name "yibA"; Parent "nbis-gene-152"; gbkey "Gene"; gene "yibA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00930"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1047 NZ_CP027599.1 Protein Homology exon 172409 173251 . - . gene_id "nbis-gene-152"; transcript_id "gene-C7A06_RS00930"; Dbxref "Genbank:WP_000072850.1"; ID "nbis-exon-161"; Name "WP_000072850.1"; Parent "gene-C7A06_RS00930"; gbkey "CDS"; gene "yibA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418051.1"; locus_tag "C7A06_RS00930"; product "HEAT repeat domain-containing protein"; protein_id "WP_000072850.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1048 NZ_CP027599.1 Protein Homology CDS 172409 173251 . - 0 gene_id "nbis-gene-152"; transcript_id "gene-C7A06_RS00930"; Dbxref "Genbank:WP_000072850.1"; ID "cds-WP_000072850.1"; Name "WP_000072850.1"; Parent "gene-C7A06_RS00930"; gbkey "CDS"; gene "yibA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418051.1"; locus_tag "C7A06_RS00930"; product "HEAT repeat domain-containing protein"; protein_id "WP_000072850.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1049 NZ_CP027599.1 RefSeq gene 173272 177393 . - . gene_id "nbis-gene-153"; ID "nbis-gene-153"; Name "C7A06_RS00935"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00935";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1050 NZ_CP027599.1 RefSeq transcript 173272 177393 . - . gene_id "nbis-gene-153"; transcript_id "gene-C7A06_RS00935"; ID "gene-C7A06_RS00935"; Name "C7A06_RS00935"; Parent "nbis-gene-153"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00935"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1051 NZ_CP027599.1 Protein Homology exon 173272 177393 . - . gene_id "nbis-gene-153"; transcript_id "gene-C7A06_RS00935"; Dbxref "Genbank:WP_000015217.1"; ID "nbis-exon-162"; Name "WP_000015217.1"; Parent "gene-C7A06_RS00935"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418050.1"; locus_tag "C7A06_RS00935"; product "polymorphic toxin type 34 domain-containing protein"; protein_id "WP_000015217.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1052 NZ_CP027599.1 Protein Homology CDS 173272 177393 . - 0 gene_id "nbis-gene-153"; transcript_id "gene-C7A06_RS00935"; Dbxref "Genbank:WP_000015217.1"; ID "cds-WP_000015217.1"; Name "WP_000015217.1"; Parent "gene-C7A06_RS00935"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418050.1"; locus_tag "C7A06_RS00935"; product "polymorphic toxin type 34 domain-containing protein"; protein_id "WP_000015217.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1053 NZ_CP027599.1 RefSeq gene 177622 178230 . + . gene_id "nbis-gene-154"; ID "nbis-gene-154"; Name "yibF"; gbkey "Gene"; gene "yibF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00940";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1054 NZ_CP027599.1 RefSeq transcript 177622 178230 . + . gene_id "nbis-gene-154"; transcript_id "gene-C7A06_RS00940"; ID "gene-C7A06_RS00940"; Name "yibF"; Parent "nbis-gene-154"; gbkey "Gene"; gene "yibF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00940"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1055 NZ_CP027599.1 Protein Homology exon 177622 178230 . + . gene_id "nbis-gene-154"; transcript_id "gene-C7A06_RS00940"; Dbxref "Genbank:WP_000779792.1"; ID "nbis-exon-163"; Name "WP_000779792.1"; Ontology_term "GO:0006749" "GO:0005515"; Parent "gene-C7A06_RS00940"; gbkey "CDS"; gene "yibF"; go_function "protein binding|0005515||IEA"; go_process "glutathione metabolic process|0006749||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418049.1"; locus_tag "C7A06_RS00940"; product "glutathione S-transferase"; protein_id "WP_000779792.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1056 NZ_CP027599.1 Protein Homology CDS 177622 178230 . + 0 gene_id "nbis-gene-154"; transcript_id "gene-C7A06_RS00940"; Dbxref "Genbank:WP_000779792.1"; ID "cds-WP_000779792.1"; Name "WP_000779792.1"; Ontology_term "GO:0006749" "GO:0005515"; Parent "gene-C7A06_RS00940"; gbkey "CDS"; gene "yibF"; go_function "protein binding|0005515||IEA"; go_process "glutathione metabolic process|0006749||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418049.1"; locus_tag "C7A06_RS00940"; product "glutathione S-transferase"; protein_id "WP_000779792.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1057 NZ_CP027599.1 RefSeq gene 178328 179719 . + . gene_id "nbis-gene-155"; ID "nbis-gene-155"; Name "selA"; gbkey "Gene"; gene "selA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00945";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1058 NZ_CP027599.1 RefSeq transcript 178328 179719 . + . gene_id "nbis-gene-155"; transcript_id "gene-C7A06_RS00945"; ID "gene-C7A06_RS00945"; Name "selA"; Parent "nbis-gene-155"; gbkey "Gene"; gene "selA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00945"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1059 NZ_CP027599.1 Protein Homology exon 178328 179719 . + . gene_id "nbis-gene-155"; transcript_id "gene-C7A06_RS00945"; Dbxref "Genbank:WP_000206271.1"; ID "nbis-exon-164"; Name "WP_000206271.1"; Ontology_term "GO:0016260" "GO:0004125"; Parent "gene-C7A06_RS00945"; gbkey "CDS"; gene "selA"; go_function "L-seryl-tRNASec selenium transferase activity|0004125||IEA"; go_process "selenocysteine biosynthetic process|0016260||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312495.1"; locus_tag "C7A06_RS00945"; product "L-seryl-tRNA(Sec) selenium transferase"; protein_id "WP_000206271.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1060 NZ_CP027599.1 Protein Homology CDS 178328 179719 . + 0 gene_id "nbis-gene-155"; transcript_id "gene-C7A06_RS00945"; Dbxref "Genbank:WP_000206271.1"; ID "cds-WP_000206271.1"; Name "WP_000206271.1"; Ontology_term "GO:0016260" "GO:0004125"; Parent "gene-C7A06_RS00945"; gbkey "CDS"; gene "selA"; go_function "L-seryl-tRNASec selenium transferase activity|0004125||IEA"; go_process "selenocysteine biosynthetic process|0016260||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312495.1"; locus_tag "C7A06_RS00945"; product "L-seryl-tRNA(Sec) selenium transferase"; protein_id "WP_000206271.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1061 NZ_CP027599.1 RefSeq gene 179716 181560 . + . gene_id "nbis-gene-156"; ID "nbis-gene-156"; Name "selB"; gbkey "Gene"; gene "selB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00950";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1062 NZ_CP027599.1 RefSeq transcript 179716 181560 . + . gene_id "nbis-gene-156"; transcript_id "gene-C7A06_RS00950"; ID "gene-C7A06_RS00950"; Name "selB"; Parent "nbis-gene-156"; gbkey "Gene"; gene "selB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00950"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1063 NZ_CP027599.1 Protein Homology exon 179716 181560 . + . gene_id "nbis-gene-156"; transcript_id "gene-C7A06_RS00950"; Dbxref "Genbank:WP_000582492.1"; ID "nbis-exon-165"; Name "WP_000582492.1"; Ontology_term "GO:0001514" "GO:0003723" "GO:0003746" "GO:0003924" "GO:0005525"; Parent "gene-C7A06_RS00950"; gbkey "CDS"; gene "selB"; go_function "RNA binding|0003723||IEA" "translation elongation factor activity|0003746||IEA" "GTPase activity|0003924||IEA" "GTP binding|0005525||IEA"; go_process "selenocysteine incorporation|0001514||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418047.1"; locus_tag "C7A06_RS00950"; product "selenocysteine-specific translation elongation factor"; protein_id "WP_000582492.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1064 NZ_CP027599.1 Protein Homology CDS 179716 181560 . + 0 gene_id "nbis-gene-156"; transcript_id "gene-C7A06_RS00950"; Dbxref "Genbank:WP_000582492.1"; ID "cds-WP_000582492.1"; Name "WP_000582492.1"; Ontology_term "GO:0001514" "GO:0003723" "GO:0003746" "GO:0003924" "GO:0005525"; Parent "gene-C7A06_RS00950"; gbkey "CDS"; gene "selB"; go_function "RNA binding|0003723||IEA" "translation elongation factor activity|0003746||IEA" "GTPase activity|0003924||IEA" "GTP binding|0005525||IEA"; go_process "selenocysteine incorporation|0001514||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418047.1"; locus_tag "C7A06_RS00950"; product "selenocysteine-specific translation elongation factor"; protein_id "WP_000582492.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1065 NZ_CP027599.1 RefSeq gene 181750 182901 . + . gene_id "nbis-gene-157"; ID "nbis-gene-157"; Name "yiaY"; gbkey "Gene"; gene "yiaY"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00955";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1066 NZ_CP027599.1 RefSeq transcript 181750 182901 . + . gene_id "nbis-gene-157"; transcript_id "gene-C7A06_RS00955"; ID "gene-C7A06_RS00955"; Name "yiaY"; Parent "nbis-gene-157"; gbkey "Gene"; gene "yiaY"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00955"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1067 NZ_CP027599.1 Protein Homology exon 181750 182901 . + . gene_id "nbis-gene-157"; transcript_id "gene-C7A06_RS00955"; Dbxref "Genbank:WP_000168712.1"; ID "nbis-exon-166"; Name "WP_000168712.1"; Ontology_term "GO:0016491"; Parent "gene-C7A06_RS00955"; gbkey "CDS"; gene "yiaY"; go_function "oxidoreductase activity|0016491||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312493.1"; locus_tag "C7A06_RS00955"; product "L-threonine dehydrogenase"; protein_id "WP_000168712.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1068 NZ_CP027599.1 Protein Homology CDS 181750 182901 . + 0 gene_id "nbis-gene-157"; transcript_id "gene-C7A06_RS00955"; Dbxref "Genbank:WP_000168712.1"; ID "cds-WP_000168712.1"; Name "WP_000168712.1"; Ontology_term "GO:0016491"; Parent "gene-C7A06_RS00955"; gbkey "CDS"; gene "yiaY"; go_function "oxidoreductase activity|0016491||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312493.1"; locus_tag "C7A06_RS00955"; product "L-threonine dehydrogenase"; protein_id "WP_000168712.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1069 NZ_CP027599.1 RefSeq gene 183066 184604 . + . gene_id "nbis-gene-158"; ID "nbis-gene-158"; Name "aldB"; gbkey "Gene"; gene "aldB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00960";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1070 NZ_CP027599.1 RefSeq transcript 183066 184604 . + . gene_id "nbis-gene-158"; transcript_id "gene-C7A06_RS00960"; ID "gene-C7A06_RS00960"; Name "aldB"; Parent "nbis-gene-158"; gbkey "Gene"; gene "aldB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00960"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1071 NZ_CP027599.1 Protein Homology exon 183066 184604 . + . gene_id "nbis-gene-158"; transcript_id "gene-C7A06_RS00960"; Dbxref "Genbank:WP_000183978.1"; ID "nbis-exon-167"; Name "WP_000183978.1"; Parent "gene-C7A06_RS00960"; gbkey "CDS"; gene "aldB"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001551836.1"; locus_tag "C7A06_RS00960"; product "aldehyde dehydrogenase AldB"; protein_id "WP_000183978.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1072 NZ_CP027599.1 Protein Homology CDS 183066 184604 . + 0 gene_id "nbis-gene-158"; transcript_id "gene-C7A06_RS00960"; Dbxref "Genbank:WP_000183978.1"; ID "cds-WP_000183978.1"; Name "WP_000183978.1"; Parent "gene-C7A06_RS00960"; gbkey "CDS"; gene "aldB"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001551836.1"; locus_tag "C7A06_RS00960"; product "aldehyde dehydrogenase AldB"; protein_id "WP_000183978.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1073 NZ_CP027599.1 RefSeq gene 184823 184987 . - . gene_id "nbis-gene-159"; ID "nbis-gene-159"; Name "C7A06_RS00965"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00965";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1074 NZ_CP027599.1 RefSeq transcript 184823 184987 . - . gene_id "nbis-gene-159"; transcript_id "gene-C7A06_RS00965"; ID "gene-C7A06_RS00965"; Name "C7A06_RS00965"; Parent "nbis-gene-159"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00965"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1075 NZ_CP027599.1 GeneMarkS-2+ exon 184823 184987 . - . gene_id "nbis-gene-159"; transcript_id "gene-C7A06_RS00965"; Dbxref "Genbank:WP_001375509.1"; ID "nbis-exon-168"; Name "WP_001375509.1"; Parent "gene-C7A06_RS00965"; gbkey "CDS"; inference "COORDINATES: ab initio prediction:GeneMarkS-2+"; locus_tag "C7A06_RS00965"; product "hypothetical protein"; protein_id "WP_001375509.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1076 NZ_CP027599.1 GeneMarkS-2+ CDS 184823 184987 . - 0 gene_id "nbis-gene-159"; transcript_id "gene-C7A06_RS00965"; Dbxref "Genbank:WP_001375509.1"; ID "cds-WP_001375509.1"; Name "WP_001375509.1"; Parent "gene-C7A06_RS00965"; gbkey "CDS"; inference "COORDINATES: ab initio prediction:GeneMarkS-2+"; locus_tag "C7A06_RS00965"; product "hypothetical protein"; protein_id "WP_001375509.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1077 NZ_CP027599.1 RefSeq gene 185169 185471 . + . gene_id "nbis-gene-160"; ID "nbis-gene-160"; Name "yiaW"; gbkey "Gene"; gene "yiaW"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00975";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1078 NZ_CP027599.1 RefSeq transcript 185169 185471 . + . gene_id "nbis-gene-160"; transcript_id "gene-C7A06_RS00975"; ID "gene-C7A06_RS00975"; Name "yiaW"; Parent "nbis-gene-160"; gbkey "Gene"; gene "yiaW"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00975"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1079 NZ_CP027599.1 Protein Homology exon 185169 185471 . + . gene_id "nbis-gene-160"; transcript_id "gene-C7A06_RS00975"; Dbxref "Genbank:WP_032348558.1"; ID "nbis-exon-169"; Name "WP_032348558.1"; Parent "gene-C7A06_RS00975"; gbkey "CDS"; gene "yiaW"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312490.1"; locus_tag "C7A06_RS00975"; product "DUF3302 domain-containing protein"; protein_id "WP_032348558.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1080 NZ_CP027599.1 Protein Homology CDS 185169 185471 . + 0 gene_id "nbis-gene-160"; transcript_id "gene-C7A06_RS00975"; Dbxref "Genbank:WP_032348558.1"; ID "cds-WP_032348558.1"; Name "WP_032348558.1"; Parent "gene-C7A06_RS00975"; gbkey "CDS"; gene "yiaW"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312490.1"; locus_tag "C7A06_RS00975"; product "DUF3302 domain-containing protein"; protein_id "WP_032348558.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1081 NZ_CP027599.1 RefSeq gene 185477 186613 . + . gene_id "nbis-gene-161"; ID "nbis-gene-161"; Name "yiaV"; gbkey "Gene"; gene "yiaV"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00980";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1082 NZ_CP027599.1 RefSeq transcript 185477 186613 . + . gene_id "nbis-gene-161"; transcript_id "gene-C7A06_RS00980"; ID "gene-C7A06_RS00980"; Name "yiaV"; Parent "nbis-gene-161"; gbkey "Gene"; gene "yiaV"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00980"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1083 NZ_CP027599.1 Protein Homology exon 185477 186613 . + . gene_id "nbis-gene-161"; transcript_id "gene-C7A06_RS00980"; Dbxref "Genbank:WP_000364874.1"; ID "nbis-exon-170"; Name "WP_000364874.1"; Parent "gene-C7A06_RS00980"; gbkey "CDS"; gene "yiaV"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418043.1"; locus_tag "C7A06_RS00980"; product "HlyD family secretion protein"; protein_id "WP_000364874.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1084 NZ_CP027599.1 Protein Homology CDS 185477 186613 . + 0 gene_id "nbis-gene-161"; transcript_id "gene-C7A06_RS00980"; Dbxref "Genbank:WP_000364874.1"; ID "cds-WP_000364874.1"; Name "WP_000364874.1"; Parent "gene-C7A06_RS00980"; gbkey "CDS"; gene "yiaV"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418043.1"; locus_tag "C7A06_RS00980"; product "HlyD family secretion protein"; protein_id "WP_000364874.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1085 NZ_CP027599.1 RefSeq gene 186610 187584 . - . gene_id "nbis-gene-162"; ID "nbis-gene-162"; Name "yiaU"; gbkey "Gene"; gene "yiaU"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00985";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1086 NZ_CP027599.1 RefSeq transcript 186610 187584 . - . gene_id "nbis-gene-162"; transcript_id "gene-C7A06_RS00985"; ID "gene-C7A06_RS00985"; Name "yiaU"; Parent "nbis-gene-162"; gbkey "Gene"; gene "yiaU"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00985"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1087 NZ_CP027599.1 Protein Homology exon 186610 187584 . - . gene_id "nbis-gene-162"; transcript_id "gene-C7A06_RS00985"; Dbxref "Genbank:WP_000164036.1"; ID "nbis-exon-171"; Name "WP_000164036.1"; Parent "gene-C7A06_RS00985"; gbkey "CDS"; gene "yiaU"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418042.1"; locus_tag "C7A06_RS00985"; product "LysR family transcriptional regulator"; protein_id "WP_000164036.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1088 NZ_CP027599.1 Protein Homology CDS 186610 187584 . - 0 gene_id "nbis-gene-162"; transcript_id "gene-C7A06_RS00985"; Dbxref "Genbank:WP_000164036.1"; ID "cds-WP_000164036.1"; Name "WP_000164036.1"; Parent "gene-C7A06_RS00985"; gbkey "CDS"; gene "yiaU"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418042.1"; locus_tag "C7A06_RS00985"; product "LysR family transcriptional regulator"; protein_id "WP_000164036.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1089 NZ_CP027599.1 RefSeq gene 187708 188448 . + . gene_id "nbis-gene-163"; ID "nbis-gene-163"; Name "yiaT"; gbkey "Gene"; gene "yiaT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00990";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1090 NZ_CP027599.1 RefSeq transcript 187708 188448 . + . gene_id "nbis-gene-163"; transcript_id "gene-C7A06_RS00990"; ID "gene-C7A06_RS00990"; Name "yiaT"; Parent "nbis-gene-163"; gbkey "Gene"; gene "yiaT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00990"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1091 NZ_CP027599.1 Protein Homology exon 187708 188448 . + . gene_id "nbis-gene-163"; transcript_id "gene-C7A06_RS00990"; Dbxref "Genbank:WP_000906808.1"; ID "nbis-exon-172"; Name "WP_000906808.1"; Parent "gene-C7A06_RS00990"; gbkey "CDS"; gene "yiaT"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312487.1"; locus_tag "C7A06_RS00990"; product "MipA/OmpV family protein"; protein_id "WP_000906808.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1092 NZ_CP027599.1 Protein Homology CDS 187708 188448 . + 0 gene_id "nbis-gene-163"; transcript_id "gene-C7A06_RS00990"; Dbxref "Genbank:WP_000906808.1"; ID "cds-WP_000906808.1"; Name "WP_000906808.1"; Parent "gene-C7A06_RS00990"; gbkey "CDS"; gene "yiaT"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312487.1"; locus_tag "C7A06_RS00990"; product "MipA/OmpV family protein"; protein_id "WP_000906808.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1093 NZ_CP027599.1 RefSeq gene 188395 188658 . - . gene_id "nbis-pseudogene-311"; ID "nbis-pseudogene-311"; Name "C7A06_RS34805"; end_range "188658" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS34805"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "188395";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1094 NZ_CP027599.1 RefSeq transcript 188395 188658 . - . gene_id "nbis-pseudogene-311"; transcript_id "gene-C7A06_RS34805"; ID "gene-C7A06_RS34805"; Name "C7A06_RS34805"; Parent "nbis-pseudogene-311"; end_range "188658" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS34805"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "188395";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1095 NZ_CP027599.1 Protein Homology exon 188395 188658 . - . gene_id "nbis-pseudogene-311"; transcript_id "gene-C7A06_RS34805"; ID "nbis-exon-6141"; Note "incomplete; partial in the middle of a contig; missing N-terminus and C-terminus"; Parent "gene-C7A06_RS34805"; end_range "188658" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_020239594.1"; locus_tag "C7A06_RS34805"; partial "true"; product "hypothetical protein"; pseudo "true"; start_range "." "188395"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1096 NZ_CP027599.1 Protein Homology CDS 188395 188658 . - 0 gene_id "nbis-pseudogene-311"; transcript_id "gene-C7A06_RS34805"; ID "cds-C7A06_RS34805"; Note "incomplete; partial in the middle of a contig; missing N-terminus and C-terminus"; Parent "gene-C7A06_RS34805"; end_range "188658" "."; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_020239594.1"; locus_tag "C7A06_RS34805"; partial "true"; product "hypothetical protein"; pseudo "true"; start_range "." "188395"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1097 NZ_CP027599.1 RefSeq gene 188662 188763 . + . gene_id "nbis-pseudogene-290"; ID "nbis-pseudogene-290"; Name "C7A06_RS34380"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS34380"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "188662";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1098 NZ_CP027599.1 RefSeq transcript 188662 188763 . + . gene_id "nbis-pseudogene-290"; transcript_id "gene-C7A06_RS34380"; ID "gene-C7A06_RS34380"; Name "C7A06_RS34380"; Parent "nbis-pseudogene-290"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS34380"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "188662";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1099 NZ_CP027599.1 Protein Homology exon 188662 188763 . + . gene_id "nbis-pseudogene-290"; transcript_id "gene-C7A06_RS34380"; ID "nbis-exon-6063"; Note "incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS34380"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312484.1"; locus_tag "C7A06_RS34380"; partial "true"; product "AraC family transcriptional regulator"; pseudo "true"; start_range "." "188662"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1100 NZ_CP027599.1 Protein Homology CDS 188662 188763 . + 0 gene_id "nbis-pseudogene-290"; transcript_id "gene-C7A06_RS34380"; ID "cds-C7A06_RS34380"; Note "incomplete; partial in the middle of a contig; missing N-terminus"; Parent "gene-C7A06_RS34380"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312484.1"; locus_tag "C7A06_RS34380"; partial "true"; product "AraC family transcriptional regulator"; pseudo "true"; start_range "." "188662"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1101 NZ_CP027599.1 RefSeq gene 188795 189490 . - . gene_id "nbis-gene-164"; ID "nbis-gene-164"; Name "araD"; gbkey "Gene"; gene "araD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01000";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1102 NZ_CP027599.1 RefSeq transcript 188795 189490 . - . gene_id "nbis-gene-164"; transcript_id "gene-C7A06_RS01000"; ID "gene-C7A06_RS01000"; Name "araD"; Parent "nbis-gene-164"; gbkey "Gene"; gene "araD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01000"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1103 NZ_CP027599.1 Protein Homology exon 188795 189490 . - . gene_id "nbis-gene-164"; transcript_id "gene-C7A06_RS01000"; Dbxref "Genbank:WP_000893142.1"; ID "nbis-exon-173"; Name "WP_000893142.1"; Ontology_term "GO:0019568" "GO:0008742"; Parent "gene-C7A06_RS01000"; gbkey "CDS"; gene "araD"; go_function "L-ribulose-phosphate 4-epimerase activity|0008742||IEA"; go_process "arabinose catabolic process|0019568||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418040.1"; locus_tag "C7A06_RS01000"; product "L-ribulose-5-phosphate 4-epimerase"; protein_id "WP_000893142.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1104 NZ_CP027599.1 Protein Homology CDS 188795 189490 . - 0 gene_id "nbis-gene-164"; transcript_id "gene-C7A06_RS01000"; Dbxref "Genbank:WP_000893142.1"; ID "cds-WP_000893142.1"; Name "WP_000893142.1"; Ontology_term "GO:0019568" "GO:0008742"; Parent "gene-C7A06_RS01000"; gbkey "CDS"; gene "araD"; go_function "L-ribulose-phosphate 4-epimerase activity|0008742||IEA"; go_process "arabinose catabolic process|0019568||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418040.1"; locus_tag "C7A06_RS01000"; product "L-ribulose-5-phosphate 4-epimerase"; protein_id "WP_000893142.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1105 NZ_CP027599.1 RefSeq gene 189484 190344 . - . gene_id "nbis-gene-165"; ID "nbis-gene-165"; Name "sgbU"; gbkey "Gene"; gene "sgbU"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01005";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1106 NZ_CP027599.1 RefSeq transcript 189484 190344 . - . gene_id "nbis-gene-165"; transcript_id "gene-C7A06_RS01005"; ID "gene-C7A06_RS01005"; Name "sgbU"; Parent "nbis-gene-165"; gbkey "Gene"; gene "sgbU"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01005"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1107 NZ_CP027599.1 Protein Homology exon 189484 190344 . - . gene_id "nbis-gene-165"; transcript_id "gene-C7A06_RS01005"; Dbxref "Genbank:WP_001296811.1"; ID "nbis-exon-174"; Name "WP_001296811.1"; Parent "gene-C7A06_RS01005"; gbkey "CDS"; gene "sgbU"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418039.2"; locus_tag "C7A06_RS01005"; product "L-ribulose-5-phosphate 3-epimerase"; protein_id "WP_001296811.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1108 NZ_CP027599.1 Protein Homology CDS 189484 190344 . - 0 gene_id "nbis-gene-165"; transcript_id "gene-C7A06_RS01005"; Dbxref "Genbank:WP_001296811.1"; ID "cds-WP_001296811.1"; Name "WP_001296811.1"; Parent "gene-C7A06_RS01005"; gbkey "CDS"; gene "sgbU"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418039.2"; locus_tag "C7A06_RS01005"; product "L-ribulose-5-phosphate 3-epimerase"; protein_id "WP_001296811.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1109 NZ_CP027599.1 RefSeq gene 190337 190999 . - . gene_id "nbis-gene-166"; ID "nbis-gene-166"; Name "ulaD"; gbkey "Gene"; gene "ulaD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01010";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1110 NZ_CP027599.1 RefSeq transcript 190337 190999 . - . gene_id "nbis-gene-166"; transcript_id "gene-C7A06_RS01010"; ID "gene-C7A06_RS01010"; Name "ulaD"; Parent "nbis-gene-166"; gbkey "Gene"; gene "ulaD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01010"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1111 NZ_CP027599.1 Protein Homology exon 190337 190999 . - . gene_id "nbis-gene-166"; transcript_id "gene-C7A06_RS01010"; Dbxref "Genbank:WP_000089497.1"; ID "nbis-exon-175"; Name "WP_000089497.1"; Parent "gene-C7A06_RS01010"; gbkey "CDS"; gene "ulaD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418038.1"; locus_tag "C7A06_RS01010"; product "3-keto-L-gulonate-6-phosphate decarboxylase UlaD"; protein_id "WP_000089497.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1112 NZ_CP027599.1 Protein Homology CDS 190337 190999 . - 0 gene_id "nbis-gene-166"; transcript_id "gene-C7A06_RS01010"; Dbxref "Genbank:WP_000089497.1"; ID "cds-WP_000089497.1"; Name "WP_000089497.1"; Parent "gene-C7A06_RS01010"; gbkey "CDS"; gene "ulaD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418038.1"; locus_tag "C7A06_RS01010"; product "3-keto-L-gulonate-6-phosphate decarboxylase UlaD"; protein_id "WP_000089497.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1113 NZ_CP027599.1 RefSeq gene 190996 192492 . - . gene_id "nbis-gene-167"; ID "nbis-gene-167"; Name "lyxK"; gbkey "Gene"; gene "lyxK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01015";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1114 NZ_CP027599.1 RefSeq transcript 190996 192492 . - . gene_id "nbis-gene-167"; transcript_id "gene-C7A06_RS01015"; ID "gene-C7A06_RS01015"; Name "lyxK"; Parent "nbis-gene-167"; gbkey "Gene"; gene "lyxK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01015"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1115 NZ_CP027599.1 Protein Homology exon 190996 192492 . - . gene_id "nbis-gene-167"; transcript_id "gene-C7A06_RS01015"; Dbxref "Genbank:WP_000196086.1"; ID "nbis-exon-176"; Name "WP_000196086.1"; Parent "gene-C7A06_RS01015"; gbkey "CDS"; gene "lyxK"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418037.1"; locus_tag "C7A06_RS01015"; product "L-xylulokinase"; protein_id "WP_000196086.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1116 NZ_CP027599.1 Protein Homology CDS 190996 192492 . - 0 gene_id "nbis-gene-167"; transcript_id "gene-C7A06_RS01015"; Dbxref "Genbank:WP_000196086.1"; ID "cds-WP_000196086.1"; Name "WP_000196086.1"; Parent "gene-C7A06_RS01015"; gbkey "CDS"; gene "lyxK"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418037.1"; locus_tag "C7A06_RS01015"; product "L-xylulokinase"; protein_id "WP_000196086.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1117 NZ_CP027599.1 RefSeq gene 192496 193482 . - . gene_id "nbis-gene-168"; ID "nbis-gene-168"; Name "yiaO"; gbkey "Gene"; gene "yiaO"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01020";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1118 NZ_CP027599.1 RefSeq transcript 192496 193482 . - . gene_id "nbis-gene-168"; transcript_id "gene-C7A06_RS01020"; ID "gene-C7A06_RS01020"; Name "yiaO"; Parent "nbis-gene-168"; gbkey "Gene"; gene "yiaO"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01020"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1119 NZ_CP027599.1 Protein Homology exon 192496 193482 . - . gene_id "nbis-gene-168"; transcript_id "gene-C7A06_RS01020"; Dbxref "Genbank:WP_000776892.1"; ID "nbis-exon-177"; Name "WP_000776892.1"; Parent "gene-C7A06_RS01020"; gbkey "CDS"; gene "yiaO"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418036.1"; locus_tag "C7A06_RS01020"; product "2,3-diketo-L-gulonate transporter substrate-binding protein YiaO"; protein_id "WP_000776892.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1120 NZ_CP027599.1 Protein Homology CDS 192496 193482 . - 0 gene_id "nbis-gene-168"; transcript_id "gene-C7A06_RS01020"; Dbxref "Genbank:WP_000776892.1"; ID "cds-WP_000776892.1"; Name "WP_000776892.1"; Parent "gene-C7A06_RS01020"; gbkey "CDS"; gene "yiaO"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418036.1"; locus_tag "C7A06_RS01020"; product "2,3-diketo-L-gulonate transporter substrate-binding protein YiaO"; protein_id "WP_000776892.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1121 NZ_CP027599.1 RefSeq gene 193495 194772 . - . gene_id "nbis-gene-169"; ID "nbis-gene-169"; Name "yiaN"; gbkey "Gene"; gene "yiaN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01025";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1122 NZ_CP027599.1 RefSeq transcript 193495 194772 . - . gene_id "nbis-gene-169"; transcript_id "gene-C7A06_RS01025"; ID "gene-C7A06_RS01025"; Name "yiaN"; Parent "nbis-gene-169"; gbkey "Gene"; gene "yiaN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01025"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1123 NZ_CP027599.1 Protein Homology exon 193495 194772 . - . gene_id "nbis-gene-169"; transcript_id "gene-C7A06_RS01025"; Dbxref "Genbank:WP_000279599.1"; ID "nbis-exon-178"; Name "WP_000279599.1"; Parent "gene-C7A06_RS01025"; gbkey "CDS"; gene "yiaN"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026232.1"; locus_tag "C7A06_RS01025"; product "2,3-diketo-L-gulonate transporter large permease YiaN"; protein_id "WP_000279599.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1124 NZ_CP027599.1 Protein Homology CDS 193495 194772 . - 0 gene_id "nbis-gene-169"; transcript_id "gene-C7A06_RS01025"; Dbxref "Genbank:WP_000279599.1"; ID "cds-WP_000279599.1"; Name "WP_000279599.1"; Parent "gene-C7A06_RS01025"; gbkey "CDS"; gene "yiaN"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026232.1"; locus_tag "C7A06_RS01025"; product "2,3-diketo-L-gulonate transporter large permease YiaN"; protein_id "WP_000279599.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1125 NZ_CP027599.1 RefSeq gene 194775 195248 . - . gene_id "nbis-gene-170"; ID "nbis-gene-170"; Name "yiaM"; gbkey "Gene"; gene "yiaM"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01030";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1126 NZ_CP027599.1 RefSeq transcript 194775 195248 . - . gene_id "nbis-gene-170"; transcript_id "gene-C7A06_RS01030"; ID "gene-C7A06_RS01030"; Name "yiaM"; Parent "nbis-gene-170"; gbkey "Gene"; gene "yiaM"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01030"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1127 NZ_CP027599.1 Protein Homology exon 194775 195248 . - . gene_id "nbis-gene-170"; transcript_id "gene-C7A06_RS01030"; Dbxref "Genbank:WP_000721664.1"; ID "nbis-exon-179"; Name "WP_000721664.1"; Parent "gene-C7A06_RS01030"; gbkey "CDS"; gene "yiaM"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418034.1"; locus_tag "C7A06_RS01030"; product "2,3-diketo-L-gulonate TRAP transporter small permease YiaM"; protein_id "WP_000721664.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1128 NZ_CP027599.1 Protein Homology CDS 194775 195248 . - 0 gene_id "nbis-gene-170"; transcript_id "gene-C7A06_RS01030"; Dbxref "Genbank:WP_000721664.1"; ID "cds-WP_000721664.1"; Name "WP_000721664.1"; Parent "gene-C7A06_RS01030"; gbkey "CDS"; gene "yiaM"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418034.1"; locus_tag "C7A06_RS01030"; product "2,3-diketo-L-gulonate TRAP transporter small permease YiaM"; protein_id "WP_000721664.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1129 NZ_CP027599.1 RefSeq gene 195366 195833 . - . gene_id "nbis-gene-171"; ID "nbis-gene-171"; Name "yiaL"; gbkey "Gene"; gene "yiaL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01035";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1130 NZ_CP027599.1 RefSeq transcript 195366 195833 . - . gene_id "nbis-gene-171"; transcript_id "gene-C7A06_RS01035"; ID "gene-C7A06_RS01035"; Name "yiaL"; Parent "nbis-gene-171"; gbkey "Gene"; gene "yiaL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01035"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1131 NZ_CP027599.1 Protein Homology exon 195366 195833 . - . gene_id "nbis-gene-171"; transcript_id "gene-C7A06_RS01035"; Dbxref "Genbank:WP_000576071.1"; ID "nbis-exon-180"; Name "WP_000576071.1"; Parent "gene-C7A06_RS01035"; gbkey "CDS"; gene "yiaL"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418033.1"; locus_tag "C7A06_RS01035"; product "YhcH/YjgK/YiaL family protein"; protein_id "WP_000576071.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1132 NZ_CP027599.1 Protein Homology CDS 195366 195833 . - 0 gene_id "nbis-gene-171"; transcript_id "gene-C7A06_RS01035"; Dbxref "Genbank:WP_000576071.1"; ID "cds-WP_000576071.1"; Name "WP_000576071.1"; Parent "gene-C7A06_RS01035"; gbkey "CDS"; gene "yiaL"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418033.1"; locus_tag "C7A06_RS01035"; product "YhcH/YjgK/YiaL family protein"; protein_id "WP_000576071.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1133 NZ_CP027599.1 RefSeq gene 195845 196843 . - . gene_id "nbis-gene-172"; ID "nbis-gene-172"; Name "yiaK"; gbkey "Gene"; gene "yiaK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01040";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1134 NZ_CP027599.1 RefSeq transcript 195845 196843 . - . gene_id "nbis-gene-172"; transcript_id "gene-C7A06_RS01040"; ID "gene-C7A06_RS01040"; Name "yiaK"; Parent "nbis-gene-172"; gbkey "Gene"; gene "yiaK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01040"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1135 NZ_CP027599.1 Protein Homology exon 195845 196843 . - . gene_id "nbis-gene-172"; transcript_id "gene-C7A06_RS01040"; Dbxref "Genbank:WP_000869039.1"; ID "nbis-exon-181"; Name "WP_000869039.1"; Ontology_term "GO:0047559" "GO:0070403"; Parent "gene-C7A06_RS01040"; gbkey "CDS"; gene "yiaK"; go_function "3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA" "NAD+ binding|0070403||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709360.1"; locus_tag "C7A06_RS01040"; product "3-dehydro-L-gulonate 2-dehydrogenase"; protein_id "WP_000869039.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1136 NZ_CP027599.1 Protein Homology CDS 195845 196843 . - 0 gene_id "nbis-gene-172"; transcript_id "gene-C7A06_RS01040"; Dbxref "Genbank:WP_000869039.1"; ID "cds-WP_000869039.1"; Name "WP_000869039.1"; Ontology_term "GO:0047559" "GO:0070403"; Parent "gene-C7A06_RS01040"; gbkey "CDS"; gene "yiaK"; go_function "3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA" "NAD+ binding|0070403||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709360.1"; locus_tag "C7A06_RS01040"; product "3-dehydro-L-gulonate 2-dehydrogenase"; protein_id "WP_000869039.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1137 NZ_CP027599.1 RefSeq gene 197044 197892 . + . gene_id "nbis-gene-173"; ID "nbis-gene-173"; Name "yiaJ"; gbkey "Gene"; gene "yiaJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01045";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1138 NZ_CP027599.1 RefSeq transcript 197044 197892 . + . gene_id "nbis-gene-173"; transcript_id "gene-C7A06_RS01045"; ID "gene-C7A06_RS01045"; Name "yiaJ"; Parent "nbis-gene-173"; gbkey "Gene"; gene "yiaJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01045"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1139 NZ_CP027599.1 Protein Homology exon 197044 197892 . + . gene_id "nbis-gene-173"; transcript_id "gene-C7A06_RS01045"; Dbxref "Genbank:WP_000514230.1"; ID "nbis-exon-182"; Name "WP_000514230.1"; Parent "gene-C7A06_RS01045"; gbkey "CDS"; gene "yiaJ"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418031.1"; locus_tag "C7A06_RS01045"; product "IclR family transcriptional regulator YiaJ"; protein_id "WP_000514230.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1140 NZ_CP027599.1 Protein Homology CDS 197044 197892 . + 0 gene_id "nbis-gene-173"; transcript_id "gene-C7A06_RS01045"; Dbxref "Genbank:WP_000514230.1"; ID "cds-WP_000514230.1"; Name "WP_000514230.1"; Parent "gene-C7A06_RS01045"; gbkey "CDS"; gene "yiaJ"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418031.1"; locus_tag "C7A06_RS01045"; product "IclR family transcriptional regulator YiaJ"; protein_id "WP_000514230.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1141 NZ_CP027599.1 RefSeq gene 197994 198467 . + . gene_id "nbis-gene-174"; ID "nbis-gene-174"; Name "ysaA"; gbkey "Gene"; gene "ysaA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01050";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1142 NZ_CP027599.1 RefSeq transcript 197994 198467 . + . gene_id "nbis-gene-174"; transcript_id "gene-C7A06_RS01050"; ID "gene-C7A06_RS01050"; Name "ysaA"; Parent "nbis-gene-174"; gbkey "Gene"; gene "ysaA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01050"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1143 NZ_CP027599.1 Protein Homology exon 197994 198467 . + . gene_id "nbis-gene-174"; transcript_id "gene-C7A06_RS01050"; Dbxref "Genbank:WP_001296790.1"; ID "nbis-exon-183"; Name "WP_001296790.1"; Parent "gene-C7A06_RS01050"; gbkey "CDS"; gene "ysaA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312483.1"; locus_tag "C7A06_RS01050"; product "4Fe-4S binding protein"; protein_id "WP_001296790.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1144 NZ_CP027599.1 Protein Homology CDS 197994 198467 . + 0 gene_id "nbis-gene-174"; transcript_id "gene-C7A06_RS01050"; Dbxref "Genbank:WP_001296790.1"; ID "cds-WP_001296790.1"; Name "WP_001296790.1"; Parent "gene-C7A06_RS01050"; gbkey "CDS"; gene "ysaA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312483.1"; locus_tag "C7A06_RS01050"; product "4Fe-4S binding protein"; protein_id "WP_001296790.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1145 NZ_CP027599.1 RefSeq gene 198619 199872 . - . gene_id "nbis-gene-175"; ID "nbis-gene-175"; Name "avtA"; gbkey "Gene"; gene "avtA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01055";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1146 NZ_CP027599.1 RefSeq transcript 198619 199872 . - . gene_id "nbis-gene-175"; transcript_id "gene-C7A06_RS01055"; ID "gene-C7A06_RS01055"; Name "avtA"; Parent "nbis-gene-175"; gbkey "Gene"; gene "avtA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01055"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1147 NZ_CP027599.1 Protein Homology exon 198619 199872 . - . gene_id "nbis-gene-175"; transcript_id "gene-C7A06_RS01055"; Dbxref "Genbank:WP_000144361.1"; ID "nbis-exon-184"; Name "WP_000144361.1"; Parent "gene-C7A06_RS01055"; gbkey "CDS"; gene "avtA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026231.1"; locus_tag "C7A06_RS01055"; product "valine--pyruvate transaminase"; protein_id "WP_000144361.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1148 NZ_CP027599.1 Protein Homology CDS 198619 199872 . - 0 gene_id "nbis-gene-175"; transcript_id "gene-C7A06_RS01055"; Dbxref "Genbank:WP_000144361.1"; ID "cds-WP_000144361.1"; Name "WP_000144361.1"; Parent "gene-C7A06_RS01055"; gbkey "CDS"; gene "avtA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026231.1"; locus_tag "C7A06_RS01055"; product "valine--pyruvate transaminase"; protein_id "WP_000144361.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1149 NZ_CP027599.1 RefSeq gene 200050 202080 . - . gene_id "nbis-gene-176"; ID "nbis-gene-176"; Name "malS"; gbkey "Gene"; gene "malS"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01060";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1150 NZ_CP027599.1 RefSeq transcript 200050 202080 . - . gene_id "nbis-gene-176"; transcript_id "gene-C7A06_RS01060"; ID "gene-C7A06_RS01060"; Name "malS"; Parent "nbis-gene-176"; gbkey "Gene"; gene "malS"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01060"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1151 NZ_CP027599.1 Protein Homology exon 200050 202080 . - . gene_id "nbis-gene-176"; transcript_id "gene-C7A06_RS01060"; Dbxref "Genbank:WP_000761204.1"; ID "nbis-exon-185"; Name "WP_000761204.1"; Ontology_term "GO:0004556"; Parent "gene-C7A06_RS01060"; gbkey "CDS"; gene "malS"; go_function "alpha-amylase activity|0004556||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312481.1"; locus_tag "C7A06_RS01060"; product "alpha-amylase"; protein_id "WP_000761204.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1152 NZ_CP027599.1 Protein Homology CDS 200050 202080 . - 0 gene_id "nbis-gene-176"; transcript_id "gene-C7A06_RS01060"; Dbxref "Genbank:WP_000761204.1"; ID "cds-WP_000761204.1"; Name "WP_000761204.1"; Ontology_term "GO:0004556"; Parent "gene-C7A06_RS01060"; gbkey "CDS"; gene "malS"; go_function "alpha-amylase activity|0004556||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312481.1"; locus_tag "C7A06_RS01060"; product "alpha-amylase"; protein_id "WP_000761204.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1153 NZ_CP027599.1 RefSeq gene 202400 203224 . + . gene_id "nbis-gene-177"; ID "nbis-gene-177"; Name "bax"; gbkey "Gene"; gene "bax"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01065";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1154 NZ_CP027599.1 RefSeq transcript 202400 203224 . + . gene_id "nbis-gene-177"; transcript_id "gene-C7A06_RS01065"; ID "gene-C7A06_RS01065"; Name "bax"; Parent "nbis-gene-177"; gbkey "Gene"; gene "bax"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01065"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1155 NZ_CP027599.1 Protein Homology exon 202400 203224 . + . gene_id "nbis-gene-177"; transcript_id "gene-C7A06_RS01065"; Dbxref "Genbank:WP_001296804.1"; ID "nbis-exon-186"; Name "WP_001296804.1"; Parent "gene-C7A06_RS01065"; gbkey "CDS"; gene "bax"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026230.1"; locus_tag "C7A06_RS01065"; product "protein bax"; protein_id "WP_001296804.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1156 NZ_CP027599.1 Protein Homology CDS 202400 203224 . + 0 gene_id "nbis-gene-177"; transcript_id "gene-C7A06_RS01065"; Dbxref "Genbank:WP_001296804.1"; ID "cds-WP_001296804.1"; Name "WP_001296804.1"; Parent "gene-C7A06_RS01065"; gbkey "CDS"; gene "bax"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026230.1"; locus_tag "C7A06_RS01065"; product "protein bax"; protein_id "WP_001296804.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1157 NZ_CP027599.1 RefSeq gene 203332 204510 . - . gene_id "nbis-gene-178"; ID "nbis-gene-178"; Name "xylR"; gbkey "Gene"; gene "xylR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01070";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1158 NZ_CP027599.1 RefSeq transcript 203332 204510 . - . gene_id "nbis-gene-178"; transcript_id "gene-C7A06_RS01070"; ID "gene-C7A06_RS01070"; Name "xylR"; Parent "nbis-gene-178"; gbkey "Gene"; gene "xylR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01070"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1159 NZ_CP027599.1 Protein Homology exon 203332 204510 . - . gene_id "nbis-gene-178"; transcript_id "gene-C7A06_RS01070"; Dbxref "Genbank:WP_000494484.1"; ID "nbis-exon-187"; Name "WP_000494484.1"; Parent "gene-C7A06_RS01070"; gbkey "CDS"; gene "xylR"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312479.1"; locus_tag "C7A06_RS01070"; product "DNA-binding transcriptional regulator XylR"; protein_id "WP_000494484.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1160 NZ_CP027599.1 Protein Homology CDS 203332 204510 . - 0 gene_id "nbis-gene-178"; transcript_id "gene-C7A06_RS01070"; Dbxref "Genbank:WP_000494484.1"; ID "cds-WP_000494484.1"; Name "WP_000494484.1"; Parent "gene-C7A06_RS01070"; gbkey "CDS"; gene "xylR"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312479.1"; locus_tag "C7A06_RS01070"; product "DNA-binding transcriptional regulator XylR"; protein_id "WP_000494484.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1161 NZ_CP027599.1 RefSeq gene 204588 205769 . - . gene_id "nbis-gene-179"; ID "nbis-gene-179"; Name "xylH"; gbkey "Gene"; gene "xylH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01075";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1162 NZ_CP027599.1 RefSeq transcript 204588 205769 . - . gene_id "nbis-gene-179"; transcript_id "gene-C7A06_RS01075"; ID "gene-C7A06_RS01075"; Name "xylH"; Parent "nbis-gene-179"; gbkey "Gene"; gene "xylH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01075"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1163 NZ_CP027599.1 Protein Homology exon 204588 205769 . - . gene_id "nbis-gene-179"; transcript_id "gene-C7A06_RS01075"; Dbxref "Genbank:WP_000045978.1"; ID "nbis-exon-188"; Name "WP_000045978.1"; Parent "gene-C7A06_RS01075"; gbkey "CDS"; gene "xylH"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312478.1"; locus_tag "C7A06_RS01075"; product "xylose ABC transporter permease XylH"; protein_id "WP_000045978.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1164 NZ_CP027599.1 Protein Homology CDS 204588 205769 . - 0 gene_id "nbis-gene-179"; transcript_id "gene-C7A06_RS01075"; Dbxref "Genbank:WP_000045978.1"; ID "cds-WP_000045978.1"; Name "WP_000045978.1"; Parent "gene-C7A06_RS01075"; gbkey "CDS"; gene "xylH"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312478.1"; locus_tag "C7A06_RS01075"; product "xylose ABC transporter permease XylH"; protein_id "WP_000045978.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1165 NZ_CP027599.1 RefSeq gene 205747 207288 . - . gene_id "nbis-gene-180"; ID "nbis-gene-180"; Name "xylG"; gbkey "Gene"; gene "xylG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01080";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1166 NZ_CP027599.1 RefSeq transcript 205747 207288 . - . gene_id "nbis-gene-180"; transcript_id "gene-C7A06_RS01080"; ID "gene-C7A06_RS01080"; Name "xylG"; Parent "nbis-gene-180"; gbkey "Gene"; gene "xylG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01080"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1167 NZ_CP027599.1 Protein Homology exon 205747 207288 . - . gene_id "nbis-gene-180"; transcript_id "gene-C7A06_RS01080"; Dbxref "Genbank:WP_001146482.1"; ID "nbis-exon-189"; Name "WP_001146482.1"; Ontology_term "GO:0015753" "GO:0005524" "GO:0015614" "GO:0009898" "GO:0055052"; Parent "gene-C7A06_RS01080"; gbkey "CDS"; gene "xylG"; go_component "cytoplasmic side of plasma membrane|0009898||IEA" "ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing|0055052||IEA"; go_function "ATP binding|0005524||IEA" "ABC-type D-xylose transporter activity|0015614||IEA"; go_process "D-xylose transmembrane transport|0015753||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312477.1"; locus_tag "C7A06_RS01080"; product "D-xylose ABC transporter ATP-binding protein"; protein_id "WP_001146482.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1168 NZ_CP027599.1 Protein Homology CDS 205747 207288 . - 0 gene_id "nbis-gene-180"; transcript_id "gene-C7A06_RS01080"; Dbxref "Genbank:WP_001146482.1"; ID "cds-WP_001146482.1"; Name "WP_001146482.1"; Ontology_term "GO:0015753" "GO:0005524" "GO:0015614" "GO:0009898" "GO:0055052"; Parent "gene-C7A06_RS01080"; gbkey "CDS"; gene "xylG"; go_component "cytoplasmic side of plasma membrane|0009898||IEA" "ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing|0055052||IEA"; go_function "ATP binding|0005524||IEA" "ABC-type D-xylose transporter activity|0015614||IEA"; go_process "D-xylose transmembrane transport|0015753||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312477.1"; locus_tag "C7A06_RS01080"; product "D-xylose ABC transporter ATP-binding protein"; protein_id "WP_001146482.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1169 NZ_CP027599.1 RefSeq gene 207366 208358 . - . gene_id "nbis-gene-181"; ID "nbis-gene-181"; Name "xylF"; gbkey "Gene"; gene "xylF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01085";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1170 NZ_CP027599.1 RefSeq transcript 207366 208358 . - . gene_id "nbis-gene-181"; transcript_id "gene-C7A06_RS01085"; ID "gene-C7A06_RS01085"; Name "xylF"; Parent "nbis-gene-181"; gbkey "Gene"; gene "xylF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01085"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1171 NZ_CP027599.1 Protein Homology exon 207366 208358 . - . gene_id "nbis-gene-181"; transcript_id "gene-C7A06_RS01085"; Dbxref "Genbank:WP_001296518.1"; ID "nbis-exon-190"; Name "WP_001296518.1"; Ontology_term "GO:0015753"; Parent "gene-C7A06_RS01085"; gbkey "CDS"; gene "xylF"; go_process "D-xylose transmembrane transport|0015753||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418023.1"; locus_tag "C7A06_RS01085"; product "D-xylose ABC transporter substrate-binding protein"; protein_id "WP_001296518.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1172 NZ_CP027599.1 Protein Homology CDS 207366 208358 . - 0 gene_id "nbis-gene-181"; transcript_id "gene-C7A06_RS01085"; Dbxref "Genbank:WP_001296518.1"; ID "cds-WP_001296518.1"; Name "WP_001296518.1"; Ontology_term "GO:0015753"; Parent "gene-C7A06_RS01085"; gbkey "CDS"; gene "xylF"; go_process "D-xylose transmembrane transport|0015753||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418023.1"; locus_tag "C7A06_RS01085"; product "D-xylose ABC transporter substrate-binding protein"; protein_id "WP_001296518.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1173 NZ_CP027599.1 RefSeq gene 208724 210046 . + . gene_id "nbis-gene-182"; ID "nbis-gene-182"; Name "xylA"; gbkey "Gene"; gene "xylA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01090";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1174 NZ_CP027599.1 RefSeq transcript 208724 210046 . + . gene_id "nbis-gene-182"; transcript_id "gene-C7A06_RS01090"; ID "gene-C7A06_RS01090"; Name "xylA"; Parent "nbis-gene-182"; gbkey "Gene"; gene "xylA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01090"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1175 NZ_CP027599.1 Protein Homology exon 208724 210046 . + . gene_id "nbis-gene-182"; transcript_id "gene-C7A06_RS01090"; Dbxref "Genbank:WP_001149582.1"; ID "nbis-exon-191"; Name "WP_001149582.1"; Ontology_term "GO:0006098" "GO:0042732" "GO:0000287" "GO:0009045"; Parent "gene-C7A06_RS01090"; gbkey "CDS"; gene "xylA"; go_function "magnesium ion binding|0000287||IEA" "xylose isomerase activity|0009045||IEA"; go_process "pentose-phosphate shunt|0006098||IEA" "D-xylose metabolic process|0042732||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312475.1"; locus_tag "C7A06_RS01090"; product "xylose isomerase"; protein_id "WP_001149582.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1176 NZ_CP027599.1 Protein Homology CDS 208724 210046 . + 0 gene_id "nbis-gene-182"; transcript_id "gene-C7A06_RS01090"; Dbxref "Genbank:WP_001149582.1"; ID "cds-WP_001149582.1"; Name "WP_001149582.1"; Ontology_term "GO:0006098" "GO:0042732" "GO:0000287" "GO:0009045"; Parent "gene-C7A06_RS01090"; gbkey "CDS"; gene "xylA"; go_function "magnesium ion binding|0000287||IEA" "xylose isomerase activity|0009045||IEA"; go_process "pentose-phosphate shunt|0006098||IEA" "D-xylose metabolic process|0042732||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312475.1"; locus_tag "C7A06_RS01090"; product "xylose isomerase"; protein_id "WP_001149582.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1177 NZ_CP027599.1 RefSeq gene 210118 211572 . + . gene_id "nbis-gene-183"; ID "nbis-gene-183"; Name "xylB"; gbkey "Gene"; gene "xylB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01095";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1178 NZ_CP027599.1 RefSeq transcript 210118 211572 . + . gene_id "nbis-gene-183"; transcript_id "gene-C7A06_RS01095"; ID "gene-C7A06_RS01095"; Name "xylB"; Parent "nbis-gene-183"; gbkey "Gene"; gene "xylB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01095"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1179 NZ_CP027599.1 Protein Homology exon 210118 211572 . + . gene_id "nbis-gene-183"; transcript_id "gene-C7A06_RS01095"; Dbxref "Genbank:WP_000275386.1"; ID "nbis-exon-192"; Name "WP_000275386.1"; Ontology_term "GO:0005997" "GO:0004856"; Parent "gene-C7A06_RS01095"; gbkey "CDS"; gene "xylB"; go_function "xylulokinase activity|0004856||IEA"; go_process "xylulose metabolic process|0005997||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709351.1"; locus_tag "C7A06_RS01095"; product "xylulokinase"; protein_id "WP_000275386.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1180 NZ_CP027599.1 Protein Homology CDS 210118 211572 . + 0 gene_id "nbis-gene-183"; transcript_id "gene-C7A06_RS01095"; Dbxref "Genbank:WP_000275386.1"; ID "cds-WP_000275386.1"; Name "WP_000275386.1"; Ontology_term "GO:0005997" "GO:0004856"; Parent "gene-C7A06_RS01095"; gbkey "CDS"; gene "xylB"; go_function "xylulokinase activity|0004856||IEA"; go_process "xylulose metabolic process|0005997||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709351.1"; locus_tag "C7A06_RS01095"; product "xylulokinase"; protein_id "WP_000275386.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1181 NZ_CP027599.1 RefSeq gene 211741 212082 . + . gene_id "nbis-gene-184"; ID "nbis-gene-184"; Name "C7A06_RS01100"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01100";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1182 NZ_CP027599.1 RefSeq transcript 211741 212082 . + . gene_id "nbis-gene-184"; transcript_id "gene-C7A06_RS01100"; ID "gene-C7A06_RS01100"; Name "C7A06_RS01100"; Parent "nbis-gene-184"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01100"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1183 NZ_CP027599.1 Protein Homology exon 211741 212082 . + . gene_id "nbis-gene-184"; transcript_id "gene-C7A06_RS01100"; Dbxref "Genbank:WP_000858193.1"; ID "nbis-exon-193"; Name "WP_000858193.1"; Parent "gene-C7A06_RS01100"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709350.2"; locus_tag "C7A06_RS01100"; product "hypothetical protein"; protein_id "WP_000858193.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1184 NZ_CP027599.1 Protein Homology CDS 211741 212082 . + 0 gene_id "nbis-gene-184"; transcript_id "gene-C7A06_RS01100"; Dbxref "Genbank:WP_000858193.1"; ID "cds-WP_000858193.1"; Name "WP_000858193.1"; Parent "gene-C7A06_RS01100"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709350.2"; locus_tag "C7A06_RS01100"; product "hypothetical protein"; protein_id "WP_000858193.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1185 NZ_CP027599.1 RefSeq gene 212128 212565 . + . gene_id "nbis-gene-185"; ID "nbis-gene-185"; Name "yiaA"; gbkey "Gene"; gene "yiaA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01105";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1186 NZ_CP027599.1 RefSeq transcript 212128 212565 . + . gene_id "nbis-gene-185"; transcript_id "gene-C7A06_RS01105"; ID "gene-C7A06_RS01105"; Name "yiaA"; Parent "nbis-gene-185"; gbkey "Gene"; gene "yiaA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01105"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1187 NZ_CP027599.1 Protein Homology exon 212128 212565 . + . gene_id "nbis-gene-185"; transcript_id "gene-C7A06_RS01105"; Dbxref "Genbank:WP_001298726.1"; ID "nbis-exon-194"; Name "WP_001298726.1"; Parent "gene-C7A06_RS01105"; gbkey "CDS"; gene "yiaA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312472.2"; locus_tag "C7A06_RS01105"; product "YiaB family inner membrane protein"; protein_id "WP_001298726.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1188 NZ_CP027599.1 Protein Homology CDS 212128 212565 . + 0 gene_id "nbis-gene-185"; transcript_id "gene-C7A06_RS01105"; Dbxref "Genbank:WP_001298726.1"; ID "cds-WP_001298726.1"; Name "WP_001298726.1"; Parent "gene-C7A06_RS01105"; gbkey "CDS"; gene "yiaA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312472.2"; locus_tag "C7A06_RS01105"; product "YiaB family inner membrane protein"; protein_id "WP_001298726.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1189 NZ_CP027599.1 RefSeq gene 212607 213602 . - . gene_id "nbis-gene-186"; ID "nbis-gene-186"; Name "wecH"; gbkey "Gene"; gene "wecH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01110";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1190 NZ_CP027599.1 RefSeq transcript 212607 213602 . - . gene_id "nbis-gene-186"; transcript_id "gene-C7A06_RS01110"; ID "gene-C7A06_RS01110"; Name "wecH"; Parent "nbis-gene-186"; gbkey "Gene"; gene "wecH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01110"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1191 NZ_CP027599.1 Protein Homology exon 212607 213602 . - . gene_id "nbis-gene-186"; transcript_id "gene-C7A06_RS01110"; Dbxref "Genbank:WP_001182671.1"; ID "nbis-exon-195"; Name "WP_001182671.1"; Parent "gene-C7A06_RS01110"; gbkey "CDS"; gene "wecH"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709348.1"; locus_tag "C7A06_RS01110"; product "O-acetyltransferase WecH"; protein_id "WP_001182671.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1192 NZ_CP027599.1 Protein Homology CDS 212607 213602 . - 0 gene_id "nbis-gene-186"; transcript_id "gene-C7A06_RS01110"; Dbxref "Genbank:WP_001182671.1"; ID "cds-WP_001182671.1"; Name "WP_001182671.1"; Parent "gene-C7A06_RS01110"; gbkey "CDS"; gene "wecH"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709348.1"; locus_tag "C7A06_RS01110"; product "O-acetyltransferase WecH"; protein_id "WP_001182671.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1193 NZ_CP027599.1 RefSeq gene 213777 214076 . + . gene_id "nbis-gene-187"; ID "nbis-gene-187"; Name "ysaB"; gbkey "Gene"; gene "ysaB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01115";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1194 NZ_CP027599.1 RefSeq transcript 213777 214076 . + . gene_id "nbis-gene-187"; transcript_id "gene-C7A06_RS01115"; ID "gene-C7A06_RS01115"; Name "ysaB"; Parent "nbis-gene-187"; gbkey "Gene"; gene "ysaB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01115"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1195 NZ_CP027599.1 Protein Homology exon 213777 214076 . + . gene_id "nbis-gene-187"; transcript_id "gene-C7A06_RS01115"; Dbxref "Genbank:WP_000980114.1"; ID "nbis-exon-196"; Name "WP_000980114.1"; Parent "gene-C7A06_RS01115"; gbkey "CDS"; gene "ysaB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709347.1"; locus_tag "C7A06_RS01115"; product "YsaB family lipoprotein"; protein_id "WP_000980114.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1196 NZ_CP027599.1 Protein Homology CDS 213777 214076 . + 0 gene_id "nbis-gene-187"; transcript_id "gene-C7A06_RS01115"; Dbxref "Genbank:WP_000980114.1"; ID "cds-WP_000980114.1"; Name "WP_000980114.1"; Parent "gene-C7A06_RS01115"; gbkey "CDS"; gene "ysaB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709347.1"; locus_tag "C7A06_RS01115"; product "YsaB family lipoprotein"; protein_id "WP_000980114.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1197 NZ_CP027599.1 RefSeq gene 214171 215082 . + . gene_id "nbis-gene-188"; ID "nbis-gene-188"; Name "glyQ"; gbkey "Gene"; gene "glyQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01120";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1198 NZ_CP027599.1 RefSeq transcript 214171 215082 . + . gene_id "nbis-gene-188"; transcript_id "gene-C7A06_RS01120"; ID "gene-C7A06_RS01120"; Name "glyQ"; Parent "nbis-gene-188"; gbkey "Gene"; gene "glyQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01120"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1199 NZ_CP027599.1 Protein Homology exon 214171 215082 . + . gene_id "nbis-gene-188"; transcript_id "gene-C7A06_RS01120"; Dbxref "Genbank:WP_001168544.1"; ID "nbis-exon-197"; Name "WP_001168544.1"; Ontology_term "GO:0006426" "GO:0004820" "GO:0009345"; Parent "gene-C7A06_RS01120"; gbkey "CDS"; gene "glyQ"; go_component "glycine-tRNA ligase complex|0009345||IEA"; go_function "glycine-tRNA ligase activity|0004820||IEA"; go_process "glycyl-tRNA aminoacylation|0006426||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312470.1"; locus_tag "C7A06_RS01120"; product "glycine--tRNA ligase subunit alpha"; protein_id "WP_001168544.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1200 NZ_CP027599.1 Protein Homology CDS 214171 215082 . + 0 gene_id "nbis-gene-188"; transcript_id "gene-C7A06_RS01120"; Dbxref "Genbank:WP_001168544.1"; ID "cds-WP_001168544.1"; Name "WP_001168544.1"; Ontology_term "GO:0006426" "GO:0004820" "GO:0009345"; Parent "gene-C7A06_RS01120"; gbkey "CDS"; gene "glyQ"; go_component "glycine-tRNA ligase complex|0009345||IEA"; go_function "glycine-tRNA ligase activity|0004820||IEA"; go_process "glycyl-tRNA aminoacylation|0006426||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312470.1"; locus_tag "C7A06_RS01120"; product "glycine--tRNA ligase subunit alpha"; protein_id "WP_001168544.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1201 NZ_CP027599.1 RefSeq gene 215092 217161 . + . gene_id "nbis-gene-189"; ID "nbis-gene-189"; Name "glyS"; gbkey "Gene"; gene "glyS"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01125";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1202 NZ_CP027599.1 RefSeq transcript 215092 217161 . + . gene_id "nbis-gene-189"; transcript_id "gene-C7A06_RS01125"; ID "gene-C7A06_RS01125"; Name "glyS"; Parent "nbis-gene-189"; gbkey "Gene"; gene "glyS"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01125"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1203 NZ_CP027599.1 Protein Homology exon 215092 217161 . + . gene_id "nbis-gene-189"; transcript_id "gene-C7A06_RS01125"; Dbxref "Genbank:WP_001291774.1"; ID "nbis-exon-198"; Name "WP_001291774.1"; Ontology_term "GO:0006426" "GO:0004820" "GO:0009345"; Parent "gene-C7A06_RS01125"; gbkey "CDS"; gene "glyS"; go_component "glycine-tRNA ligase complex|0009345||IEA"; go_function "glycine-tRNA ligase activity|0004820||IEA"; go_process "glycyl-tRNA aminoacylation|0006426||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1"; locus_tag "C7A06_RS01125"; product "glycine--tRNA ligase subunit beta"; protein_id "WP_001291774.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1204 NZ_CP027599.1 Protein Homology CDS 215092 217161 . + 0 gene_id "nbis-gene-189"; transcript_id "gene-C7A06_RS01125"; Dbxref "Genbank:WP_001291774.1"; ID "cds-WP_001291774.1"; Name "WP_001291774.1"; Ontology_term "GO:0006426" "GO:0004820" "GO:0009345"; Parent "gene-C7A06_RS01125"; gbkey "CDS"; gene "glyS"; go_component "glycine-tRNA ligase complex|0009345||IEA"; go_function "glycine-tRNA ligase activity|0004820||IEA"; go_process "glycyl-tRNA aminoacylation|0006426||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1"; locus_tag "C7A06_RS01125"; product "glycine--tRNA ligase subunit beta"; protein_id "WP_001291774.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1205 NZ_CP027599.1 RefSeq gene 217486 217638 . + . gene_id "nbis-gene-190"; ID "nbis-gene-190"; Name "hokA"; gbkey "Gene"; gene "hokA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01130";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1206 NZ_CP027599.1 RefSeq transcript 217486 217638 . + . gene_id "nbis-gene-190"; transcript_id "gene-C7A06_RS01130"; ID "gene-C7A06_RS01130"; Name "hokA"; Parent "nbis-gene-190"; gbkey "Gene"; gene "hokA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01130"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1207 NZ_CP027599.1 Protein Homology exon 217486 217638 . + . gene_id "nbis-gene-190"; transcript_id "gene-C7A06_RS01130"; Dbxref "Genbank:WP_001135738.1"; ID "nbis-exon-199"; Name "WP_001135738.1"; Parent "gene-C7A06_RS01130"; gbkey "CDS"; gene "hokA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012540334.1"; locus_tag "C7A06_RS01130"; product "type I toxin-antitoxin system toxin HokA"; protein_id "WP_001135738.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1208 NZ_CP027599.1 Protein Homology CDS 217486 217638 . + 0 gene_id "nbis-gene-190"; transcript_id "gene-C7A06_RS01130"; Dbxref "Genbank:WP_001135738.1"; ID "cds-WP_001135738.1"; Name "WP_001135738.1"; Parent "gene-C7A06_RS01130"; gbkey "CDS"; gene "hokA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012540334.1"; locus_tag "C7A06_RS01130"; product "type I toxin-antitoxin system toxin HokA"; protein_id "WP_001135738.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1209 NZ_CP027599.1 RefSeq gene 217627 217686 . - . gene_id "nbis-gene-5808"; ID "nbis-gene-5808"; Name "C7A06_RS34675"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS34675";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1210 NZ_CP027599.1 RefSeq transcript 217627 217686 . - . gene_id "nbis-gene-5808"; transcript_id "gene-C7A06_RS34675"; ID "gene-C7A06_RS34675"; Name "C7A06_RS34675"; Parent "nbis-gene-5808"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS34675"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1211 NZ_CP027599.1 Protein Homology exon 217627 217686 . - . gene_id "nbis-gene-5808"; transcript_id "gene-C7A06_RS34675"; Dbxref "Genbank:WP_212591412.1"; ID "nbis-exon-6117"; Name "WP_212591412.1"; Parent "gene-C7A06_RS34675"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_010051206.1"; locus_tag "C7A06_RS34675"; product "hypothetical protein"; protein_id "WP_212591412.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1212 NZ_CP027599.1 Protein Homology CDS 217627 217686 . - 0 gene_id "nbis-gene-5808"; transcript_id "gene-C7A06_RS34675"; Dbxref "Genbank:WP_212591412.1"; ID "cds-WP_212591412.1"; Name "WP_212591412.1"; Parent "gene-C7A06_RS34675"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_010051206.1"; locus_tag "C7A06_RS34675"; product "hypothetical protein"; protein_id "WP_212591412.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1213 NZ_CP027599.1 RefSeq gene 217826 218038 . - . gene_id "nbis-gene-191"; ID "nbis-gene-191"; Name "cspA"; gbkey "Gene"; gene "cspA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01135";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1214 NZ_CP027599.1 RefSeq transcript 217826 218038 . - . gene_id "nbis-gene-191"; transcript_id "gene-C7A06_RS01135"; ID "gene-C7A06_RS01135"; Name "cspA"; Parent "nbis-gene-191"; gbkey "Gene"; gene "cspA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01135"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1215 NZ_CP027599.1 Protein Homology exon 217826 218038 . - . gene_id "nbis-gene-191"; transcript_id "gene-C7A06_RS01135"; Dbxref "Genbank:WP_000014594.1"; ID "nbis-exon-200"; Name "WP_000014594.1"; Parent "gene-C7A06_RS01135"; gbkey "CDS"; gene "cspA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312468.1"; locus_tag "C7A06_RS01135"; product "RNA chaperone/antiterminator CspA"; protein_id "WP_000014594.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1216 NZ_CP027599.1 Protein Homology CDS 217826 218038 . - 0 gene_id "nbis-gene-191"; transcript_id "gene-C7A06_RS01135"; Dbxref "Genbank:WP_000014594.1"; ID "cds-WP_000014594.1"; Name "WP_000014594.1"; Parent "gene-C7A06_RS01135"; gbkey "CDS"; gene "cspA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312468.1"; locus_tag "C7A06_RS01135"; product "RNA chaperone/antiterminator CspA"; protein_id "WP_000014594.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1217 NZ_CP027599.1 RefSeq gene 218319 218609 . - . gene_id "nbis-gene-192"; ID "nbis-gene-192"; Name "yiaG"; gbkey "Gene"; gene "yiaG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01140";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1218 NZ_CP027599.1 RefSeq transcript 218319 218609 . - . gene_id "nbis-gene-192"; transcript_id "gene-C7A06_RS01140"; ID "gene-C7A06_RS01140"; Name "yiaG"; Parent "nbis-gene-192"; gbkey "Gene"; gene "yiaG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01140"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1219 NZ_CP027599.1 Protein Homology exon 218319 218609 . - . gene_id "nbis-gene-192"; transcript_id "gene-C7A06_RS01140"; Dbxref "Genbank:WP_000455798.1"; ID "nbis-exon-201"; Name "WP_000455798.1"; Parent "gene-C7A06_RS01140"; gbkey "CDS"; gene "yiaG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312467.1"; locus_tag "C7A06_RS01140"; product "HTH-type transcriptional regulator"; protein_id "WP_000455798.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1220 NZ_CP027599.1 Protein Homology CDS 218319 218609 . - 0 gene_id "nbis-gene-192"; transcript_id "gene-C7A06_RS01140"; Dbxref "Genbank:WP_000455798.1"; ID "cds-WP_000455798.1"; Name "WP_000455798.1"; Parent "gene-C7A06_RS01140"; gbkey "CDS"; gene "yiaG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312467.1"; locus_tag "C7A06_RS01140"; product "HTH-type transcriptional regulator"; protein_id "WP_000455798.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1221 NZ_CP027599.1 RefSeq gene 219043 219753 . + . gene_id "nbis-gene-193"; ID "nbis-gene-193"; Name "yiaF"; gbkey "Gene"; gene "yiaF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01145";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1222 NZ_CP027599.1 RefSeq transcript 219043 219753 . + . gene_id "nbis-gene-193"; transcript_id "gene-C7A06_RS01145"; ID "gene-C7A06_RS01145"; Name "yiaF"; Parent "nbis-gene-193"; gbkey "Gene"; gene "yiaF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01145"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1223 NZ_CP027599.1 Protein Homology exon 219043 219753 . + . gene_id "nbis-gene-193"; transcript_id "gene-C7A06_RS01145"; Dbxref "Genbank:WP_000190517.1"; ID "nbis-exon-202"; Name "WP_000190517.1"; Parent "gene-C7A06_RS01145"; gbkey "CDS"; gene "yiaF"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418010.2"; locus_tag "C7A06_RS01145"; product "DUF3053 domain-containing protein"; protein_id "WP_000190517.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1224 NZ_CP027599.1 Protein Homology CDS 219043 219753 . + 0 gene_id "nbis-gene-193"; transcript_id "gene-C7A06_RS01145"; Dbxref "Genbank:WP_000190517.1"; ID "cds-WP_000190517.1"; Name "WP_000190517.1"; Parent "gene-C7A06_RS01145"; gbkey "CDS"; gene "yiaF"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418010.2"; locus_tag "C7A06_RS01145"; product "DUF3053 domain-containing protein"; protein_id "WP_000190517.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1225 NZ_CP027599.1 RefSeq gene 219803 220777 . - . gene_id "nbis-gene-194"; ID "nbis-gene-194"; Name "ghrB"; gbkey "Gene"; gene "ghrB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01150";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1226 NZ_CP027599.1 RefSeq transcript 219803 220777 . - . gene_id "nbis-gene-194"; transcript_id "gene-C7A06_RS01150"; ID "gene-C7A06_RS01150"; Name "ghrB"; Parent "nbis-gene-194"; gbkey "Gene"; gene "ghrB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01150"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1227 NZ_CP027599.1 Protein Homology exon 219803 220777 . - . gene_id "nbis-gene-194"; transcript_id "gene-C7A06_RS01150"; Dbxref "Genbank:WP_000805027.1"; ID "nbis-exon-203"; Name "WP_000805027.1"; Ontology_term "GO:0016616" "GO:0051287"; Parent "gene-C7A06_RS01150"; gbkey "CDS"; gene "ghrB"; go_function "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor|0016616||IEA" "NAD binding|0051287||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312465.2"; locus_tag "C7A06_RS01150"; product "glyoxylate/hydroxypyruvate reductase GhrB"; protein_id "WP_000805027.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1228 NZ_CP027599.1 Protein Homology CDS 219803 220777 . - 0 gene_id "nbis-gene-194"; transcript_id "gene-C7A06_RS01150"; Dbxref "Genbank:WP_000805027.1"; ID "cds-WP_000805027.1"; Name "WP_000805027.1"; Ontology_term "GO:0016616" "GO:0051287"; Parent "gene-C7A06_RS01150"; gbkey "CDS"; gene "ghrB"; go_function "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor|0016616||IEA" "NAD binding|0051287||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312465.2"; locus_tag "C7A06_RS01150"; product "glyoxylate/hydroxypyruvate reductase GhrB"; protein_id "WP_000805027.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1229 NZ_CP027599.1 RefSeq gene 220881 221540 . - . gene_id "nbis-gene-195"; ID "nbis-gene-195"; Name "yiaD"; gbkey "Gene"; gene "yiaD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01155";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1230 NZ_CP027599.1 RefSeq transcript 220881 221540 . - . gene_id "nbis-gene-195"; transcript_id "gene-C7A06_RS01155"; ID "gene-C7A06_RS01155"; Name "yiaD"; Parent "nbis-gene-195"; gbkey "Gene"; gene "yiaD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01155"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1231 NZ_CP027599.1 Protein Homology exon 220881 221540 . - . gene_id "nbis-gene-195"; transcript_id "gene-C7A06_RS01155"; Dbxref "Genbank:WP_000747625.1"; ID "nbis-exon-204"; Name "WP_000747625.1"; Ontology_term "GO:0009279"; Parent "gene-C7A06_RS01155"; gbkey "CDS"; gene "yiaD"; go_component "cell outer membrane|0009279||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312464.1"; locus_tag "C7A06_RS01155"; product "OmpA family lipoprotein"; protein_id "WP_000747625.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1232 NZ_CP027599.1 Protein Homology CDS 220881 221540 . - 0 gene_id "nbis-gene-195"; transcript_id "gene-C7A06_RS01155"; Dbxref "Genbank:WP_000747625.1"; ID "cds-WP_000747625.1"; Name "WP_000747625.1"; Ontology_term "GO:0009279"; Parent "gene-C7A06_RS01155"; gbkey "CDS"; gene "yiaD"; go_component "cell outer membrane|0009279||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312464.1"; locus_tag "C7A06_RS01155"; product "OmpA family lipoprotein"; protein_id "WP_000747625.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1233 NZ_CP027599.1 RefSeq gene 221693 224026 . + . gene_id "nbis-gene-196"; ID "nbis-gene-196"; Name "bisC"; gbkey "Gene"; gene "bisC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01160";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1234 NZ_CP027599.1 RefSeq transcript 221693 224026 . + . gene_id "nbis-gene-196"; transcript_id "gene-C7A06_RS01160"; ID "gene-C7A06_RS01160"; Name "bisC"; Parent "nbis-gene-196"; gbkey "Gene"; gene "bisC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01160"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1235 NZ_CP027599.1 Protein Homology exon 221693 224026 . + . gene_id "nbis-gene-196"; transcript_id "gene-C7A06_RS01160"; Dbxref "Genbank:WP_000013916.1"; ID "nbis-exon-205"; Name "WP_000013916.1"; Parent "gene-C7A06_RS01160"; gbkey "CDS"; gene "bisC"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418007.3"; locus_tag "C7A06_RS01160"; product "biotin sulfoxide reductase"; protein_id "WP_000013916.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1236 NZ_CP027599.1 Protein Homology CDS 221693 224026 . + 0 gene_id "nbis-gene-196"; transcript_id "gene-C7A06_RS01160"; Dbxref "Genbank:WP_000013916.1"; ID "cds-WP_000013916.1"; Name "WP_000013916.1"; Parent "gene-C7A06_RS01160"; gbkey "CDS"; gene "bisC"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418007.3"; locus_tag "C7A06_RS01160"; product "biotin sulfoxide reductase"; protein_id "WP_000013916.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1237 NZ_CP027599.1 RefSeq gene 223995 224435 . - . gene_id "nbis-gene-197"; ID "nbis-gene-197"; Name "yiaC"; gbkey "Gene"; gene "yiaC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01165";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1238 NZ_CP027599.1 RefSeq transcript 223995 224435 . - . gene_id "nbis-gene-197"; transcript_id "gene-C7A06_RS01165"; ID "gene-C7A06_RS01165"; Name "yiaC"; Parent "nbis-gene-197"; gbkey "Gene"; gene "yiaC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01165"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1239 NZ_CP027599.1 Protein Homology exon 223995 224435 . - . gene_id "nbis-gene-197"; transcript_id "gene-C7A06_RS01165"; Dbxref "Genbank:WP_000617478.1"; ID "nbis-exon-206"; Name "WP_000617478.1"; Ontology_term "GO:0008080"; Parent "gene-C7A06_RS01165"; gbkey "CDS"; gene "yiaC"; go_function "N-acetyltransferase activity|0008080||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709328.1"; locus_tag "C7A06_RS01165"; product "N-acetyltransferase"; protein_id "WP_000617478.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1240 NZ_CP027599.1 Protein Homology CDS 223995 224435 . - 0 gene_id "nbis-gene-197"; transcript_id "gene-C7A06_RS01165"; Dbxref "Genbank:WP_000617478.1"; ID "cds-WP_000617478.1"; Name "WP_000617478.1"; Ontology_term "GO:0008080"; Parent "gene-C7A06_RS01165"; gbkey "CDS"; gene "yiaC"; go_function "N-acetyltransferase activity|0008080||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709328.1"; locus_tag "C7A06_RS01165"; product "N-acetyltransferase"; protein_id "WP_000617478.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1241 NZ_CP027599.1 RefSeq gene 224432 224995 . - . gene_id "nbis-gene-198"; ID "nbis-gene-198"; Name "tag"; gbkey "Gene"; gene "tag"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01170";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1242 NZ_CP027599.1 RefSeq transcript 224432 224995 . - . gene_id "nbis-gene-198"; transcript_id "gene-C7A06_RS01170"; ID "gene-C7A06_RS01170"; Name "tag"; Parent "nbis-gene-198"; gbkey "Gene"; gene "tag"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01170"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1243 NZ_CP027599.1 Protein Homology exon 224432 224995 . - . gene_id "nbis-gene-198"; transcript_id "gene-C7A06_RS01170"; Dbxref "Genbank:WP_000438953.1"; ID "nbis-exon-207"; Name "WP_000438953.1"; Parent "gene-C7A06_RS01170"; gbkey "CDS"; gene "tag"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418005.1"; locus_tag "C7A06_RS01170"; product "DNA-3-methyladenine glycosylase I"; protein_id "WP_000438953.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1244 NZ_CP027599.1 Protein Homology CDS 224432 224995 . - 0 gene_id "nbis-gene-198"; transcript_id "gene-C7A06_RS01170"; Dbxref "Genbank:WP_000438953.1"; ID "cds-WP_000438953.1"; Name "WP_000438953.1"; Parent "gene-C7A06_RS01170"; gbkey "CDS"; gene "tag"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418005.1"; locus_tag "C7A06_RS01170"; product "DNA-3-methyladenine glycosylase I"; protein_id "WP_000438953.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1245 NZ_CP027599.1 RefSeq gene 225153 225851 . + . gene_id "nbis-gene-199"; ID "nbis-gene-199"; Name "yhjY"; gbkey "Gene"; gene "yhjY"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01175";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1246 NZ_CP027599.1 RefSeq transcript 225153 225851 . + . gene_id "nbis-gene-199"; transcript_id "gene-C7A06_RS01175"; ID "gene-C7A06_RS01175"; Name "yhjY"; Parent "nbis-gene-199"; gbkey "Gene"; gene "yhjY"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01175"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1247 NZ_CP027599.1 Protein Homology exon 225153 225851 . + . gene_id "nbis-gene-199"; transcript_id "gene-C7A06_RS01175"; Dbxref "Genbank:WP_001296791.1"; ID "nbis-exon-208"; Name "WP_001296791.1"; Parent "gene-C7A06_RS01175"; gbkey "CDS"; gene "yhjY"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709326.2"; locus_tag "C7A06_RS01175"; product "autotransporter outer membrane beta-barrel domain-containing protein"; protein_id "WP_001296791.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1248 NZ_CP027599.1 Protein Homology CDS 225153 225851 . + 0 gene_id "nbis-gene-199"; transcript_id "gene-C7A06_RS01175"; Dbxref "Genbank:WP_001296791.1"; ID "cds-WP_001296791.1"; Name "WP_001296791.1"; Parent "gene-C7A06_RS01175"; gbkey "CDS"; gene "yhjY"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709326.2"; locus_tag "C7A06_RS01175"; product "autotransporter outer membrane beta-barrel domain-containing protein"; protein_id "WP_001296791.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1249 NZ_CP027599.1 RefSeq gene 226080 227282 . + . gene_id "nbis-gene-200"; ID "nbis-gene-200"; Name "yhjX"; gbkey "Gene"; gene "yhjX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01185";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1250 NZ_CP027599.1 RefSeq transcript 226080 227282 . + . gene_id "nbis-gene-200"; transcript_id "gene-C7A06_RS01185"; ID "gene-C7A06_RS01185"; Name "yhjX"; Parent "nbis-gene-200"; gbkey "Gene"; gene "yhjX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01185"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1251 NZ_CP027599.1 Protein Homology exon 226080 227282 . + . gene_id "nbis-gene-200"; transcript_id "gene-C7A06_RS01185"; Dbxref "Genbank:WP_000189036.1"; ID "nbis-exon-209"; Name "WP_000189036.1"; Parent "gene-C7A06_RS01185"; gbkey "CDS"; gene "yhjX"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312459.1"; locus_tag "C7A06_RS01185"; product "MFS transporter"; protein_id "WP_000189036.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1252 NZ_CP027599.1 Protein Homology CDS 226080 227282 . + 0 gene_id "nbis-gene-200"; transcript_id "gene-C7A06_RS01185"; Dbxref "Genbank:WP_000189036.1"; ID "cds-WP_000189036.1"; Name "WP_000189036.1"; Parent "gene-C7A06_RS01185"; gbkey "CDS"; gene "yhjX"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312459.1"; locus_tag "C7A06_RS01185"; product "MFS transporter"; protein_id "WP_000189036.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1253 NZ_CP027599.1 RefSeq gene 227606 228130 . + . gene_id "nbis-gene-201"; ID "nbis-gene-201"; Name "C7A06_RS01190"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01190";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1254 NZ_CP027599.1 RefSeq transcript 227606 228130 . + . gene_id "nbis-gene-201"; transcript_id "gene-C7A06_RS01190"; ID "gene-C7A06_RS01190"; Name "C7A06_RS01190"; Parent "nbis-gene-201"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01190"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1255 NZ_CP027599.1 Protein Homology exon 227606 228130 . + . gene_id "nbis-gene-201"; transcript_id "gene-C7A06_RS01190"; Dbxref "Genbank:WP_000756356.1"; ID "nbis-exon-210"; Name "WP_000756356.1"; Parent "gene-C7A06_RS01190"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000756357.1"; locus_tag "C7A06_RS01190"; product "long polar fimbria major subunit LpfA"; protein_id "WP_000756356.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1256 NZ_CP027599.1 Protein Homology CDS 227606 228130 . + 0 gene_id "nbis-gene-201"; transcript_id "gene-C7A06_RS01190"; Dbxref "Genbank:WP_000756356.1"; ID "cds-WP_000756356.1"; Name "WP_000756356.1"; Parent "gene-C7A06_RS01190"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000756357.1"; locus_tag "C7A06_RS01190"; product "long polar fimbria major subunit LpfA"; protein_id "WP_000756356.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1257 NZ_CP027599.1 RefSeq gene 228214 228900 . + . gene_id "nbis-gene-202"; ID "nbis-gene-202"; Name "lpfB"; gbkey "Gene"; gene "lpfB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01195";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1258 NZ_CP027599.1 RefSeq transcript 228214 228900 . + . gene_id "nbis-gene-202"; transcript_id "gene-C7A06_RS01195"; ID "gene-C7A06_RS01195"; Name "lpfB"; Parent "nbis-gene-202"; gbkey "Gene"; gene "lpfB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01195"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1259 NZ_CP027599.1 Protein Homology exon 228214 228900 . + . gene_id "nbis-gene-202"; transcript_id "gene-C7A06_RS01195"; Dbxref "Genbank:WP_000822476.1"; ID "nbis-exon-211"; Name "WP_000822476.1"; Parent "gene-C7A06_RS01195"; gbkey "CDS"; gene "lpfB"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000822474.1"; locus_tag "C7A06_RS01195"; product "long polar fimbrial biogenesis chaperone LpfB"; protein_id "WP_000822476.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1260 NZ_CP027599.1 Protein Homology CDS 228214 228900 . + 0 gene_id "nbis-gene-202"; transcript_id "gene-C7A06_RS01195"; Dbxref "Genbank:WP_000822476.1"; ID "cds-WP_000822476.1"; Name "WP_000822476.1"; Parent "gene-C7A06_RS01195"; gbkey "CDS"; gene "lpfB"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000822474.1"; locus_tag "C7A06_RS01195"; product "long polar fimbrial biogenesis chaperone LpfB"; protein_id "WP_000822476.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1261 NZ_CP027599.1 RefSeq gene 228924 231455 . + . gene_id "nbis-gene-203"; ID "nbis-gene-203"; Name "lpfC"; gbkey "Gene"; gene "lpfC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01200";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1262 NZ_CP027599.1 RefSeq transcript 228924 231455 . + . gene_id "nbis-gene-203"; transcript_id "gene-C7A06_RS01200"; ID "gene-C7A06_RS01200"; Name "lpfC"; Parent "nbis-gene-203"; gbkey "Gene"; gene "lpfC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01200"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1263 NZ_CP027599.1 Protein Homology exon 228924 231455 . + . gene_id "nbis-gene-203"; transcript_id "gene-C7A06_RS01200"; Dbxref "Genbank:WP_000558677.1"; ID "nbis-exon-212"; Name "WP_000558677.1"; Parent "gene-C7A06_RS01200"; gbkey "CDS"; gene "lpfC"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001759518.1"; locus_tag "C7A06_RS01200"; product "outer membrane usher protein LpfC"; protein_id "WP_000558677.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1264 NZ_CP027599.1 Protein Homology CDS 228924 231455 . + 0 gene_id "nbis-gene-203"; transcript_id "gene-C7A06_RS01200"; Dbxref "Genbank:WP_000558677.1"; ID "cds-WP_000558677.1"; Name "WP_000558677.1"; Parent "gene-C7A06_RS01200"; gbkey "CDS"; gene "lpfC"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001759518.1"; locus_tag "C7A06_RS01200"; product "outer membrane usher protein LpfC"; protein_id "WP_000558677.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1265 NZ_CP027599.1 RefSeq gene 231466 232521 . + . gene_id "nbis-gene-204"; ID "nbis-gene-204"; Name "lpfD"; gbkey "Gene"; gene "lpfD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01205";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1266 NZ_CP027599.1 RefSeq transcript 231466 232521 . + . gene_id "nbis-gene-204"; transcript_id "gene-C7A06_RS01205"; ID "gene-C7A06_RS01205"; Name "lpfD"; Parent "nbis-gene-204"; gbkey "Gene"; gene "lpfD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01205"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1267 NZ_CP027599.1 Protein Homology exon 231466 232521 . + . gene_id "nbis-gene-204"; transcript_id "gene-C7A06_RS01205"; Dbxref "Genbank:WP_000694926.1"; ID "nbis-exon-213"; Name "WP_000694926.1"; Parent "gene-C7A06_RS01205"; gbkey "CDS"; gene "lpfD"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000694923.1"; locus_tag "C7A06_RS01205"; product "long polar fimbrial protein LpfD"; protein_id "WP_000694926.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1268 NZ_CP027599.1 Protein Homology CDS 231466 232521 . + 0 gene_id "nbis-gene-204"; transcript_id "gene-C7A06_RS01205"; Dbxref "Genbank:WP_000694926.1"; ID "cds-WP_000694926.1"; Name "WP_000694926.1"; Parent "gene-C7A06_RS01205"; gbkey "CDS"; gene "lpfD"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000694923.1"; locus_tag "C7A06_RS01205"; product "long polar fimbrial protein LpfD"; protein_id "WP_000694926.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1269 NZ_CP027599.1 RefSeq gene 232527 233051 . + . gene_id "nbis-gene-205"; ID "nbis-gene-205"; Name "lpfE"; gbkey "Gene"; gene "lpfE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01210";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1270 NZ_CP027599.1 RefSeq transcript 232527 233051 . + . gene_id "nbis-gene-205"; transcript_id "gene-C7A06_RS01210"; ID "gene-C7A06_RS01210"; Name "lpfE"; Parent "nbis-gene-205"; gbkey "Gene"; gene "lpfE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01210"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1271 NZ_CP027599.1 Protein Homology exon 232527 233051 . + . gene_id "nbis-gene-205"; transcript_id "gene-C7A06_RS01210"; Dbxref "Genbank:WP_000831422.1"; ID "nbis-exon-214"; Name "WP_000831422.1"; Parent "gene-C7A06_RS01210"; gbkey "CDS"; gene "lpfE"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000792957.1"; locus_tag "C7A06_RS01210"; product "long polar fimbrial protein LpfE"; protein_id "WP_000831422.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1272 NZ_CP027599.1 Protein Homology CDS 232527 233051 . + 0 gene_id "nbis-gene-205"; transcript_id "gene-C7A06_RS01210"; Dbxref "Genbank:WP_000831422.1"; ID "cds-WP_000831422.1"; Name "WP_000831422.1"; Parent "gene-C7A06_RS01210"; gbkey "CDS"; gene "lpfE"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000792957.1"; locus_tag "C7A06_RS01210"; product "long polar fimbrial protein LpfE"; protein_id "WP_000831422.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1273 NZ_CP027599.1 RefSeq gene 233304 234995 . + . gene_id "nbis-gene-206"; ID "nbis-gene-206"; Name "eptB"; gbkey "Gene"; gene "eptB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01215";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1274 NZ_CP027599.1 RefSeq transcript 233304 234995 . + . gene_id "nbis-gene-206"; transcript_id "gene-C7A06_RS01215"; ID "gene-C7A06_RS01215"; Name "eptB"; Parent "nbis-gene-206"; gbkey "Gene"; gene "eptB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01215"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1275 NZ_CP027599.1 Protein Homology exon 233304 234995 . + . gene_id "nbis-gene-206"; transcript_id "gene-C7A06_RS01215"; Dbxref "Genbank:WP_001269224.1"; ID "nbis-exon-215"; Name "WP_001269224.1"; Ontology_term "GO:0008484"; Parent "gene-C7A06_RS01215"; gbkey "CDS"; gene "eptB"; go_function "sulfuric ester hydrolase activity|0008484||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418002.2"; locus_tag "C7A06_RS01215"; product "kdo(2)-lipid A phosphoethanolamine 7''-transferase"; protein_id "WP_001269224.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1276 NZ_CP027599.1 Protein Homology CDS 233304 234995 . + 0 gene_id "nbis-gene-206"; transcript_id "gene-C7A06_RS01215"; Dbxref "Genbank:WP_001269224.1"; ID "cds-WP_001269224.1"; Name "WP_001269224.1"; Ontology_term "GO:0008484"; Parent "gene-C7A06_RS01215"; gbkey "CDS"; gene "eptB"; go_function "sulfuric ester hydrolase activity|0008484||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418002.2"; locus_tag "C7A06_RS01215"; product "kdo(2)-lipid A phosphoethanolamine 7''-transferase"; protein_id "WP_001269224.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1277 NZ_CP027599.1 RefSeq gene 235087 235163 . + . gene_id "gene-C7A06_RS01220"; ID "gene-C7A06_RS01220"; Name "C7A06_RS01220"; gbkey "Gene"; gene_biotype "tRNA"; locus_tag "C7A06_RS01220";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1278 NZ_CP027599.1 tRNAscan-SE transcript 235087 235163 . + . gene_id "gene-C7A06_RS01220"; transcript_id "rna-C7A06_RS01220"; ID "rna-C7A06_RS01220"; Parent "gene-C7A06_RS01220"; anticodon "(pos:235121..235123)"; gbkey "tRNA"; inference "COORDINATES: profile:tRNAscan-SE:2.0.7"; locus_tag "C7A06_RS01220"; original_biotype "trna"; product "tRNA-Pro";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1279 NZ_CP027599.1 tRNAscan-SE exon 235087 235163 . + . gene_id "gene-C7A06_RS01220"; transcript_id "rna-C7A06_RS01220"; ID "exon-C7A06_RS01220-1"; Parent "rna-C7A06_RS01220"; anticodon "(pos:235121..235123)"; gbkey "tRNA"; inference "COORDINATES: profile:tRNAscan-SE:2.0.7"; locus_tag "C7A06_RS01220"; product "tRNA-Pro";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1280 NZ_CP027599.1 RefSeq gene 235198 235331 . + . gene_id "gene-C7A06_RS01225"; ID "gene-C7A06_RS01225"; Name "C7A06_RS01225"; gbkey "Gene"; gene_biotype "ncRNA"; locus_tag "C7A06_RS01225";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1281 NZ_CP027599.1 cmsearch transcript 235198 235331 . + . gene_id "gene-C7A06_RS01225"; transcript_id "rna-C7A06_RS01225"; Dbxref "RFAM:RF00391"; ID "rna-C7A06_RS01225"; Note "rtT sRNA, processed from tyrT transcript"; Parent "gene-C7A06_RS01225"; gbkey "ncRNA"; inference "COORDINATES: profile:INFERNAL:1.1.1"; locus_tag "C7A06_RS01225"; original_biotype "ncrna"; product "RtT sRNA";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1282 NZ_CP027599.1 cmsearch exon 235198 235331 . + . gene_id "gene-C7A06_RS01225"; transcript_id "rna-C7A06_RS01225"; Dbxref "RFAM:RF00391"; ID "exon-C7A06_RS01225-1"; Note "rtT sRNA, processed from tyrT transcript"; Parent "rna-C7A06_RS01225"; gbkey "ncRNA"; inference "COORDINATES: profile:INFERNAL:1.1.1"; locus_tag "C7A06_RS01225"; product "RtT sRNA";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1283 NZ_CP027599.1 RefSeq gene 235531 236511 . - . gene_id "nbis-gene-207"; ID "nbis-gene-207"; Name "C7A06_RS01235"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01235";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1284 NZ_CP027599.1 RefSeq transcript 235531 236511 . - . gene_id "nbis-gene-207"; transcript_id "gene-C7A06_RS01235"; ID "gene-C7A06_RS01235"; Name "C7A06_RS01235"; Parent "nbis-gene-207"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01235"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1285 NZ_CP027599.1 Protein Homology exon 235531 236511 . - . gene_id "nbis-gene-207"; transcript_id "gene-C7A06_RS01235"; Dbxref "Genbank:WP_000399648.1"; ID "nbis-exon-216"; Name "WP_000399648.1"; Parent "gene-C7A06_RS01235"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012904434.1"; locus_tag "C7A06_RS01235"; product "IS110-like element IS621 family transposase"; protein_id "WP_000399648.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1286 NZ_CP027599.1 Protein Homology CDS 235531 236511 . - 0 gene_id "nbis-gene-207"; transcript_id "gene-C7A06_RS01235"; Dbxref "Genbank:WP_000399648.1"; ID "cds-WP_000399648.1"; Name "WP_000399648.1"; Parent "gene-C7A06_RS01235"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012904434.1"; locus_tag "C7A06_RS01235"; product "IS110-like element IS621 family transposase"; protein_id "WP_000399648.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1287 NZ_CP027599.1 RefSeq gene 236503 237003 . + . gene_id "nbis-gene-5830"; ID "nbis-gene-5830"; Name "C7A06_RS34810"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS34810";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1288 NZ_CP027599.1 RefSeq transcript 236503 237003 . + . gene_id "nbis-gene-5830"; transcript_id "gene-C7A06_RS34810"; ID "gene-C7A06_RS34810"; Name "C7A06_RS34810"; Parent "nbis-gene-5830"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS34810"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1289 NZ_CP027599.1 GeneMarkS-2+ exon 236503 237003 . + . gene_id "nbis-gene-5830"; transcript_id "gene-C7A06_RS34810"; Dbxref "Genbank:WP_000469071.1"; ID "nbis-exon-6142"; Name "WP_000469071.1"; Parent "gene-C7A06_RS34810"; gbkey "CDS"; inference "COORDINATES: ab initio prediction:GeneMarkS-2+"; locus_tag "C7A06_RS34810"; product "hypothetical protein"; protein_id "WP_000469071.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1290 NZ_CP027599.1 GeneMarkS-2+ CDS 236503 237003 . + 0 gene_id "nbis-gene-5830"; transcript_id "gene-C7A06_RS34810"; Dbxref "Genbank:WP_000469071.1"; ID "cds-WP_000469071.1"; Name "WP_000469071.1"; Parent "gene-C7A06_RS34810"; gbkey "CDS"; inference "COORDINATES: ab initio prediction:GeneMarkS-2+"; locus_tag "C7A06_RS34810"; product "hypothetical protein"; protein_id "WP_000469071.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1291 NZ_CP027599.1 RefSeq gene 237355 238962 . + . gene_id "nbis-gene-208"; ID "nbis-gene-208"; Name "dppA"; gbkey "Gene"; gene "dppA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01245";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1292 NZ_CP027599.1 RefSeq transcript 237355 238962 . + . gene_id "nbis-gene-208"; transcript_id "gene-C7A06_RS01245"; ID "gene-C7A06_RS01245"; Name "dppA"; Parent "nbis-gene-208"; gbkey "Gene"; gene "dppA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01245"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1293 NZ_CP027599.1 Protein Homology exon 237355 238962 . + . gene_id "nbis-gene-208"; transcript_id "gene-C7A06_RS01245"; Dbxref "Genbank:WP_001222883.1"; ID "nbis-exon-217"; Name "WP_001222883.1"; Parent "gene-C7A06_RS01245"; gbkey "CDS"; gene "dppA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418001.1"; locus_tag "C7A06_RS01245"; product "dipeptide ABC transporter substrate-binding protein DppA"; protein_id "WP_001222883.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1294 NZ_CP027599.1 Protein Homology CDS 237355 238962 . + 0 gene_id "nbis-gene-208"; transcript_id "gene-C7A06_RS01245"; Dbxref "Genbank:WP_001222883.1"; ID "cds-WP_001222883.1"; Name "WP_001222883.1"; Parent "gene-C7A06_RS01245"; gbkey "CDS"; gene "dppA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418001.1"; locus_tag "C7A06_RS01245"; product "dipeptide ABC transporter substrate-binding protein DppA"; protein_id "WP_001222883.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1295 NZ_CP027599.1 RefSeq gene 239113 240132 . + . gene_id "nbis-gene-209"; ID "nbis-gene-209"; Name "dppB"; gbkey "Gene"; gene "dppB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01255";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1296 NZ_CP027599.1 RefSeq transcript 239113 240132 . + . gene_id "nbis-gene-209"; transcript_id "gene-C7A06_RS01255"; ID "gene-C7A06_RS01255"; Name "dppB"; Parent "nbis-gene-209"; gbkey "Gene"; gene "dppB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01255"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1297 NZ_CP027599.1 Protein Homology exon 239113 240132 . + . gene_id "nbis-gene-209"; transcript_id "gene-C7A06_RS01255"; Dbxref "Genbank:WP_000938864.1"; ID "nbis-exon-218"; Name "WP_000938864.1"; Parent "gene-C7A06_RS01255"; gbkey "CDS"; gene "dppB"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1"; locus_tag "C7A06_RS01255"; product "dipeptide ABC transporter permease DppB"; protein_id "WP_000938864.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1298 NZ_CP027599.1 Protein Homology CDS 239113 240132 . + 0 gene_id "nbis-gene-209"; transcript_id "gene-C7A06_RS01255"; Dbxref "Genbank:WP_000938864.1"; ID "cds-WP_000938864.1"; Name "WP_000938864.1"; Parent "gene-C7A06_RS01255"; gbkey "CDS"; gene "dppB"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1"; locus_tag "C7A06_RS01255"; product "dipeptide ABC transporter permease DppB"; protein_id "WP_000938864.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1299 NZ_CP027599.1 RefSeq gene 240142 241044 . + . gene_id "nbis-gene-210"; ID "nbis-gene-210"; Name "dppC"; gbkey "Gene"; gene "dppC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01260";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1300 NZ_CP027599.1 RefSeq transcript 240142 241044 . + . gene_id "nbis-gene-210"; transcript_id "gene-C7A06_RS01260"; ID "gene-C7A06_RS01260"; Name "dppC"; Parent "nbis-gene-210"; gbkey "Gene"; gene "dppC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01260"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1301 NZ_CP027599.1 Protein Homology exon 240142 241044 . + . gene_id "nbis-gene-210"; transcript_id "gene-C7A06_RS01260"; Dbxref "Genbank:WP_000084677.1"; ID "nbis-exon-219"; Name "WP_000084677.1"; Ontology_term "GO:0055085"; Parent "gene-C7A06_RS01260"; gbkey "CDS"; gene "dppC"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1"; locus_tag "C7A06_RS01260"; product "dipeptide ABC transporter permease DppC"; protein_id "WP_000084677.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1302 NZ_CP027599.1 Protein Homology CDS 240142 241044 . + 0 gene_id "nbis-gene-210"; transcript_id "gene-C7A06_RS01260"; Dbxref "Genbank:WP_000084677.1"; ID "cds-WP_000084677.1"; Name "WP_000084677.1"; Ontology_term "GO:0055085"; Parent "gene-C7A06_RS01260"; gbkey "CDS"; gene "dppC"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1"; locus_tag "C7A06_RS01260"; product "dipeptide ABC transporter permease DppC"; protein_id "WP_000084677.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1303 NZ_CP027599.1 RefSeq gene 241055 242038 . + . gene_id "nbis-gene-211"; ID "nbis-gene-211"; Name "dppD"; gbkey "Gene"; gene "dppD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01265";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1304 NZ_CP027599.1 RefSeq transcript 241055 242038 . + . gene_id "nbis-gene-211"; transcript_id "gene-C7A06_RS01265"; ID "gene-C7A06_RS01265"; Name "dppD"; Parent "nbis-gene-211"; gbkey "Gene"; gene "dppD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01265"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1305 NZ_CP027599.1 Protein Homology exon 241055 242038 . + . gene_id "nbis-gene-211"; transcript_id "gene-C7A06_RS01265"; Dbxref "Genbank:WP_001196495.1"; ID "nbis-exon-220"; Name "WP_001196495.1"; Ontology_term "GO:0015833" "GO:0000166" "GO:0005524"; Parent "gene-C7A06_RS01265"; gbkey "CDS"; gene "dppD"; go_function "nucleotide binding|0000166||IEA" "ATP binding|0005524||IEA"; go_process "peptide transport|0015833||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312448.1"; locus_tag "C7A06_RS01265"; product "dipeptide ABC transporter ATP-binding protein"; protein_id "WP_001196495.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1306 NZ_CP027599.1 Protein Homology CDS 241055 242038 . + 0 gene_id "nbis-gene-211"; transcript_id "gene-C7A06_RS01265"; Dbxref "Genbank:WP_001196495.1"; ID "cds-WP_001196495.1"; Name "WP_001196495.1"; Ontology_term "GO:0015833" "GO:0000166" "GO:0005524"; Parent "gene-C7A06_RS01265"; gbkey "CDS"; gene "dppD"; go_function "nucleotide binding|0000166||IEA" "ATP binding|0005524||IEA"; go_process "peptide transport|0015833||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312448.1"; locus_tag "C7A06_RS01265"; product "dipeptide ABC transporter ATP-binding protein"; protein_id "WP_001196495.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1307 NZ_CP027599.1 RefSeq gene 242035 243039 . + . gene_id "nbis-gene-212"; ID "nbis-gene-212"; Name "dppF"; gbkey "Gene"; gene "dppF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01270";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1308 NZ_CP027599.1 RefSeq transcript 242035 243039 . + . gene_id "nbis-gene-212"; transcript_id "gene-C7A06_RS01270"; ID "gene-C7A06_RS01270"; Name "dppF"; Parent "nbis-gene-212"; gbkey "Gene"; gene "dppF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01270"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1309 NZ_CP027599.1 Protein Homology exon 242035 243039 . + . gene_id "nbis-gene-212"; transcript_id "gene-C7A06_RS01270"; Dbxref "Genbank:WP_000107031.1"; ID "nbis-exon-221"; Name "WP_000107031.1"; Parent "gene-C7A06_RS01270"; gbkey "CDS"; gene "dppF"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312447.1"; locus_tag "C7A06_RS01270"; product "dipeptide ABC transporter ATP-binding subunit DppF"; protein_id "WP_000107031.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1310 NZ_CP027599.1 Protein Homology CDS 242035 243039 . + 0 gene_id "nbis-gene-212"; transcript_id "gene-C7A06_RS01270"; Dbxref "Genbank:WP_000107031.1"; ID "cds-WP_000107031.1"; Name "WP_000107031.1"; Parent "gene-C7A06_RS01270"; gbkey "CDS"; gene "dppF"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312447.1"; locus_tag "C7A06_RS01270"; product "dipeptide ABC transporter ATP-binding subunit DppF"; protein_id "WP_000107031.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1311 NZ_CP027599.1 RefSeq gene 243069 244340 . - . gene_id "nbis-gene-213"; ID "nbis-gene-213"; Name "yhjV"; gbkey "Gene"; gene "yhjV"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01275";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1312 NZ_CP027599.1 RefSeq transcript 243069 244340 . - . gene_id "nbis-gene-213"; transcript_id "gene-C7A06_RS01275"; ID "gene-C7A06_RS01275"; Name "yhjV"; Parent "nbis-gene-213"; gbkey "Gene"; gene "yhjV"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01275"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1313 NZ_CP027599.1 Protein Homology exon 243069 244340 . - . gene_id "nbis-gene-213"; transcript_id "gene-C7A06_RS01275"; Dbxref "Genbank:WP_001296805.1"; ID "nbis-exon-222"; Name "WP_001296805.1"; Parent "gene-C7A06_RS01275"; gbkey "CDS"; gene "yhjV"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417996.1"; locus_tag "C7A06_RS01275"; product "amino acid permease"; protein_id "WP_001296805.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1314 NZ_CP027599.1 Protein Homology CDS 243069 244340 . - 0 gene_id "nbis-gene-213"; transcript_id "gene-C7A06_RS01275"; Dbxref "Genbank:WP_001296805.1"; ID "cds-WP_001296805.1"; Name "WP_001296805.1"; Parent "gene-C7A06_RS01275"; gbkey "CDS"; gene "yhjV"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417996.1"; locus_tag "C7A06_RS01275"; product "amino acid permease"; protein_id "WP_001296805.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1315 NZ_CP027599.1 RefSeq gene 244816 244923 . + . gene_id "nbis-gene-214"; ID "nbis-gene-214"; Name "C7A06_RS01285"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01285";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1316 NZ_CP027599.1 RefSeq transcript 244816 244923 . + . gene_id "nbis-gene-214"; transcript_id "gene-C7A06_RS01285"; ID "gene-C7A06_RS01285"; Name "C7A06_RS01285"; Parent "nbis-gene-214"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01285"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1317 NZ_CP027599.1 Protein Homology exon 244816 244923 . + . gene_id "nbis-gene-214"; transcript_id "gene-C7A06_RS01285"; Dbxref "Genbank:WP_001295224.1"; ID "nbis-exon-223"; Name "WP_001295224.1"; Parent "gene-C7A06_RS01285"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1"; locus_tag "C7A06_RS01285"; product "type I toxin-antitoxin system toxin Ldr family protein"; protein_id "WP_001295224.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1318 NZ_CP027599.1 Protein Homology CDS 244816 244923 . + 0 gene_id "nbis-gene-214"; transcript_id "gene-C7A06_RS01285"; Dbxref "Genbank:WP_001295224.1"; ID "cds-WP_001295224.1"; Name "WP_001295224.1"; Parent "gene-C7A06_RS01285"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1"; locus_tag "C7A06_RS01285"; product "type I toxin-antitoxin system toxin Ldr family protein"; protein_id "WP_001295224.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1319 NZ_CP027599.1 RefSeq gene 245299 245406 . + . gene_id "nbis-gene-5707"; ID "nbis-gene-5707"; Name "C7A06_RS33915"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33915";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1320 NZ_CP027599.1 RefSeq transcript 245299 245406 . + . gene_id "nbis-gene-5707"; transcript_id "gene-C7A06_RS33915"; ID "gene-C7A06_RS33915"; Name "C7A06_RS33915"; Parent "nbis-gene-5707"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33915"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1321 NZ_CP027599.1 Protein Homology exon 245299 245406 . + . gene_id "nbis-gene-5707"; transcript_id "gene-C7A06_RS33915"; Dbxref "Genbank:WP_001295224.1"; ID "nbis-exon-5989"; Name "WP_001295224.1"; Parent "gene-C7A06_RS33915"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1"; locus_tag "C7A06_RS33915"; product "type I toxin-antitoxin system toxin Ldr family protein"; protein_id "WP_001295224.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1322 NZ_CP027599.1 Protein Homology CDS 245299 245406 . + 0 gene_id "nbis-gene-5707"; transcript_id "gene-C7A06_RS33915"; Dbxref "Genbank:WP_001295224.1"; ID "cds-WP_001295224.1-2"; Name "WP_001295224.1"; Parent "gene-C7A06_RS33915"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1"; locus_tag "C7A06_RS33915"; product "type I toxin-antitoxin system toxin Ldr family protein"; protein_id "WP_001295224.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1323 NZ_CP027599.1 RefSeq gene 245782 245889 . + . gene_id "nbis-gene-5708"; ID "nbis-gene-5708"; Name "C7A06_RS33920"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33920";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1324 NZ_CP027599.1 RefSeq transcript 245782 245889 . + . gene_id "nbis-gene-5708"; transcript_id "gene-C7A06_RS33920"; ID "gene-C7A06_RS33920"; Name "C7A06_RS33920"; Parent "nbis-gene-5708"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33920"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1325 NZ_CP027599.1 Protein Homology exon 245782 245889 . + . gene_id "nbis-gene-5708"; transcript_id "gene-C7A06_RS33920"; Dbxref "Genbank:WP_001295224.1"; ID "nbis-exon-5990"; Name "WP_001295224.1"; Parent "gene-C7A06_RS33920"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1"; locus_tag "C7A06_RS33920"; product "type I toxin-antitoxin system toxin Ldr family protein"; protein_id "WP_001295224.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1326 NZ_CP027599.1 Protein Homology CDS 245782 245889 . + 0 gene_id "nbis-gene-5708"; transcript_id "gene-C7A06_RS33920"; Dbxref "Genbank:WP_001295224.1"; ID "cds-WP_001295224.1-3"; Name "WP_001295224.1"; Parent "gene-C7A06_RS33920"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1"; locus_tag "C7A06_RS33920"; product "type I toxin-antitoxin system toxin Ldr family protein"; protein_id "WP_001295224.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1327 NZ_CP027599.1 RefSeq gene 246265 246372 . + . gene_id "nbis-gene-215"; ID "nbis-gene-215"; Name "C7A06_RS01315"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01315";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1328 NZ_CP027599.1 RefSeq transcript 246265 246372 . + . gene_id "nbis-gene-215"; transcript_id "gene-C7A06_RS01315"; ID "gene-C7A06_RS01315"; Name "C7A06_RS01315"; Parent "nbis-gene-215"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01315"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1329 NZ_CP027599.1 Protein Homology exon 246265 246372 . + . gene_id "nbis-gene-215"; transcript_id "gene-C7A06_RS01315"; Dbxref "Genbank:WP_001295224.1"; ID "nbis-exon-224"; Name "WP_001295224.1"; Parent "gene-C7A06_RS01315"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1"; locus_tag "C7A06_RS01315"; product "type I toxin-antitoxin system toxin Ldr family protein"; protein_id "WP_001295224.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1330 NZ_CP027599.1 Protein Homology CDS 246265 246372 . + 0 gene_id "nbis-gene-215"; transcript_id "gene-C7A06_RS01315"; Dbxref "Genbank:WP_001295224.1"; ID "cds-WP_001295224.1-4"; Name "WP_001295224.1"; Parent "gene-C7A06_RS01315"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1"; locus_tag "C7A06_RS01315"; product "type I toxin-antitoxin system toxin Ldr family protein"; protein_id "WP_001295224.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1331 NZ_CP027599.1 RefSeq gene 246459 248138 . - . gene_id "nbis-gene-216"; ID "nbis-gene-216"; Name "bcsG"; gbkey "Gene"; gene "bcsG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01320";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1332 NZ_CP027599.1 RefSeq transcript 246459 248138 . - . gene_id "nbis-gene-216"; transcript_id "gene-C7A06_RS01320"; ID "gene-C7A06_RS01320"; Name "bcsG"; Parent "nbis-gene-216"; gbkey "Gene"; gene "bcsG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01320"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1333 NZ_CP027599.1 Protein Homology exon 246459 248138 . - . gene_id "nbis-gene-216"; transcript_id "gene-C7A06_RS01320"; Dbxref "Genbank:WP_000191606.1"; ID "nbis-exon-225"; Name "WP_000191606.1"; Ontology_term "GO:0030244" "GO:0003674" "GO:0005575"; Parent "gene-C7A06_RS01320"; gbkey "CDS"; gene "bcsG"; go_component "cellular_component|0005575||IEA"; go_function "molecular_function|0003674||IEA"; go_process "cellulose biosynthetic process|0030244||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312445.1"; locus_tag "C7A06_RS01320"; product "cellulose biosynthesis protein BcsG"; protein_id "WP_000191606.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1334 NZ_CP027599.1 Protein Homology CDS 246459 248138 . - 0 gene_id "nbis-gene-216"; transcript_id "gene-C7A06_RS01320"; Dbxref "Genbank:WP_000191606.1"; ID "cds-WP_000191606.1"; Name "WP_000191606.1"; Ontology_term "GO:0030244" "GO:0003674" "GO:0005575"; Parent "gene-C7A06_RS01320"; gbkey "CDS"; gene "bcsG"; go_component "cellular_component|0005575||IEA"; go_function "molecular_function|0003674||IEA"; go_process "cellulose biosynthetic process|0030244||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312445.1"; locus_tag "C7A06_RS01320"; product "cellulose biosynthesis protein BcsG"; protein_id "WP_000191606.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1335 NZ_CP027599.1 RefSeq gene 248135 248326 . - . gene_id "nbis-gene-217"; ID "nbis-gene-217"; Name "bcsF"; gbkey "Gene"; gene "bcsF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01325";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1336 NZ_CP027599.1 RefSeq transcript 248135 248326 . - . gene_id "nbis-gene-217"; transcript_id "gene-C7A06_RS01325"; ID "gene-C7A06_RS01325"; Name "bcsF"; Parent "nbis-gene-217"; gbkey "Gene"; gene "bcsF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01325"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1337 NZ_CP027599.1 Protein Homology exon 248135 248326 . - . gene_id "nbis-gene-217"; transcript_id "gene-C7A06_RS01325"; Dbxref "Genbank:WP_000988308.1"; ID "nbis-exon-226"; Name "WP_000988308.1"; Ontology_term "GO:0052324" "GO:0003674" "GO:0005575"; Parent "gene-C7A06_RS01325"; gbkey "CDS"; gene "bcsF"; go_component "cellular_component|0005575||IEA"; go_function "molecular_function|0003674||IEA"; go_process "plant-type cell wall cellulose biosynthetic process|0052324||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417994.2"; locus_tag "C7A06_RS01325"; product "cellulose biosynthesis protein BcsF"; protein_id "WP_000988308.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1338 NZ_CP027599.1 Protein Homology CDS 248135 248326 . - 0 gene_id "nbis-gene-217"; transcript_id "gene-C7A06_RS01325"; Dbxref "Genbank:WP_000988308.1"; ID "cds-WP_000988308.1"; Name "WP_000988308.1"; Ontology_term "GO:0052324" "GO:0003674" "GO:0005575"; Parent "gene-C7A06_RS01325"; gbkey "CDS"; gene "bcsF"; go_component "cellular_component|0005575||IEA"; go_function "molecular_function|0003674||IEA"; go_process "plant-type cell wall cellulose biosynthetic process|0052324||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417994.2"; locus_tag "C7A06_RS01325"; product "cellulose biosynthesis protein BcsF"; protein_id "WP_000988308.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1339 NZ_CP027599.1 RefSeq gene 248323 249894 . - . gene_id "nbis-gene-218"; ID "nbis-gene-218"; Name "bcsE"; gbkey "Gene"; gene "bcsE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01330";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1340 NZ_CP027599.1 RefSeq transcript 248323 249894 . - . gene_id "nbis-gene-218"; transcript_id "gene-C7A06_RS01330"; ID "gene-C7A06_RS01330"; Name "bcsE"; Parent "nbis-gene-218"; gbkey "Gene"; gene "bcsE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01330"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1341 NZ_CP027599.1 Protein Homology exon 248323 249894 . - . gene_id "nbis-gene-218"; transcript_id "gene-C7A06_RS01330"; Dbxref "Genbank:WP_001204931.1"; ID "nbis-exon-227"; Name "WP_001204931.1"; Ontology_term "GO:0035438"; Parent "gene-C7A06_RS01330"; gbkey "CDS"; gene "bcsE"; go_function "cyclic-di-GMP binding|0035438||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417993.1"; locus_tag "C7A06_RS01330"; product "cellulose biosynthesis protein BcsE"; protein_id "WP_001204931.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1342 NZ_CP027599.1 Protein Homology CDS 248323 249894 . - 0 gene_id "nbis-gene-218"; transcript_id "gene-C7A06_RS01330"; Dbxref "Genbank:WP_001204931.1"; ID "cds-WP_001204931.1"; Name "WP_001204931.1"; Ontology_term "GO:0035438"; Parent "gene-C7A06_RS01330"; gbkey "CDS"; gene "bcsE"; go_function "cyclic-di-GMP binding|0035438||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417993.1"; locus_tag "C7A06_RS01330"; product "cellulose biosynthesis protein BcsE"; protein_id "WP_001204931.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1343 NZ_CP027599.1 RefSeq gene 250167 250355 . + . gene_id "nbis-gene-219"; ID "nbis-gene-219"; Name "bcsR"; gbkey "Gene"; gene "bcsR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01335";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1344 NZ_CP027599.1 RefSeq transcript 250167 250355 . + . gene_id "nbis-gene-219"; transcript_id "gene-C7A06_RS01335"; ID "gene-C7A06_RS01335"; Name "bcsR"; Parent "nbis-gene-219"; gbkey "Gene"; gene "bcsR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01335"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1345 NZ_CP027599.1 Protein Homology exon 250167 250355 . + . gene_id "nbis-gene-219"; transcript_id "gene-C7A06_RS01335"; Dbxref "Genbank:WP_001063318.1"; ID "nbis-exon-228"; Name "WP_001063318.1"; Parent "gene-C7A06_RS01335"; gbkey "CDS"; gene "bcsR"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417992.1"; locus_tag "C7A06_RS01335"; product "cellulose biosynthesis protein BcsR"; protein_id "WP_001063318.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1346 NZ_CP027599.1 Protein Homology CDS 250167 250355 . + 0 gene_id "nbis-gene-219"; transcript_id "gene-C7A06_RS01335"; Dbxref "Genbank:WP_001063318.1"; ID "cds-WP_001063318.1"; Name "WP_001063318.1"; Parent "gene-C7A06_RS01335"; gbkey "CDS"; gene "bcsR"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417992.1"; locus_tag "C7A06_RS01335"; product "cellulose biosynthesis protein BcsR"; protein_id "WP_001063318.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1347 NZ_CP027599.1 RefSeq gene 250367 251119 . + . gene_id "nbis-gene-220"; ID "nbis-gene-220"; Name "bcsQ"; gbkey "Gene"; gene "bcsQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01340";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1348 NZ_CP027599.1 RefSeq transcript 250367 251119 . + . gene_id "nbis-gene-220"; transcript_id "gene-C7A06_RS01340"; ID "gene-C7A06_RS01340"; Name "bcsQ"; Parent "nbis-gene-220"; gbkey "Gene"; gene "bcsQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01340"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1349 NZ_CP027599.1 Protein Homology exon 250367 251119 . + . gene_id "nbis-gene-220"; transcript_id "gene-C7A06_RS01340"; Dbxref "Genbank:WP_000279530.1"; ID "nbis-exon-229"; Name "WP_000279530.1"; Parent "gene-C7A06_RS01340"; gbkey "CDS"; gene "bcsQ"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709309.1"; locus_tag "C7A06_RS01340"; product "cellulose biosynthesis protein BcsQ"; protein_id "WP_000279530.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1350 NZ_CP027599.1 Protein Homology CDS 250367 251119 . + 0 gene_id "nbis-gene-220"; transcript_id "gene-C7A06_RS01340"; Dbxref "Genbank:WP_000279530.1"; ID "cds-WP_000279530.1"; Name "WP_000279530.1"; Parent "gene-C7A06_RS01340"; gbkey "CDS"; gene "bcsQ"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709309.1"; locus_tag "C7A06_RS01340"; product "cellulose biosynthesis protein BcsQ"; protein_id "WP_000279530.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1351 NZ_CP027599.1 RefSeq gene 251116 253734 . + . gene_id "nbis-gene-221"; ID "nbis-gene-221"; Name "bcsA"; gbkey "Gene"; gene "bcsA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01345";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1352 NZ_CP027599.1 RefSeq transcript 251116 253734 . + . gene_id "nbis-gene-221"; transcript_id "gene-C7A06_RS01345"; ID "gene-C7A06_RS01345"; Name "bcsA"; Parent "nbis-gene-221"; gbkey "Gene"; gene "bcsA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01345"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1353 NZ_CP027599.1 Protein Homology exon 251116 253734 . + . gene_id "nbis-gene-221"; transcript_id "gene-C7A06_RS01345"; Dbxref "Genbank:WP_000025892.1"; ID "nbis-exon-230"; Name "WP_000025892.1"; Ontology_term "GO:0006011" "GO:0030244" "GO:0016760" "GO:0035438" "GO:0016020"; Parent "gene-C7A06_RS01345"; gbkey "CDS"; gene "bcsA"; go_component "membrane|0016020||IEA"; go_function "cellulose synthase (UDP-forming) activity|0016760||IEA" "cyclic-di-GMP binding|0035438||IEA"; go_process "UDP-glucose metabolic process|0006011||IEA" "cellulose biosynthetic process|0030244||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417990.4"; locus_tag "C7A06_RS01345"; product "UDP-forming cellulose synthase catalytic subunit"; protein_id "WP_000025892.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1354 NZ_CP027599.1 Protein Homology CDS 251116 253734 . + 0 gene_id "nbis-gene-221"; transcript_id "gene-C7A06_RS01345"; Dbxref "Genbank:WP_000025892.1"; ID "cds-WP_000025892.1"; Name "WP_000025892.1"; Ontology_term "GO:0006011" "GO:0030244" "GO:0016760" "GO:0035438" "GO:0016020"; Parent "gene-C7A06_RS01345"; gbkey "CDS"; gene "bcsA"; go_component "membrane|0016020||IEA"; go_function "cellulose synthase (UDP-forming) activity|0016760||IEA" "cyclic-di-GMP binding|0035438||IEA"; go_process "UDP-glucose metabolic process|0006011||IEA" "cellulose biosynthetic process|0030244||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417990.4"; locus_tag "C7A06_RS01345"; product "UDP-forming cellulose synthase catalytic subunit"; protein_id "WP_000025892.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1355 NZ_CP027599.1 RefSeq gene 253745 256084 . + . gene_id "nbis-gene-222"; ID "nbis-gene-222"; Name "bcsB"; gbkey "Gene"; gene "bcsB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01350";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1356 NZ_CP027599.1 RefSeq transcript 253745 256084 . + . gene_id "nbis-gene-222"; transcript_id "gene-C7A06_RS01350"; ID "gene-C7A06_RS01350"; Name "bcsB"; Parent "nbis-gene-222"; gbkey "Gene"; gene "bcsB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01350"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1357 NZ_CP027599.1 Protein Homology exon 253745 256084 . + . gene_id "nbis-gene-222"; transcript_id "gene-C7A06_RS01350"; Dbxref "Genbank:WP_000823624.1"; ID "nbis-exon-231"; Name "WP_000823624.1"; Parent "gene-C7A06_RS01350"; gbkey "CDS"; gene "bcsB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417989.1"; locus_tag "C7A06_RS01350"; product "cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB"; protein_id "WP_000823624.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1358 NZ_CP027599.1 Protein Homology CDS 253745 256084 . + 0 gene_id "nbis-gene-222"; transcript_id "gene-C7A06_RS01350"; Dbxref "Genbank:WP_000823624.1"; ID "cds-WP_000823624.1"; Name "WP_000823624.1"; Parent "gene-C7A06_RS01350"; gbkey "CDS"; gene "bcsB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417989.1"; locus_tag "C7A06_RS01350"; product "cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB"; protein_id "WP_000823624.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1359 NZ_CP027599.1 RefSeq gene 256091 257197 . + . gene_id "nbis-gene-223"; ID "nbis-gene-223"; Name "bcsZ"; gbkey "Gene"; gene "bcsZ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01355";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1360 NZ_CP027599.1 RefSeq transcript 256091 257197 . + . gene_id "nbis-gene-223"; transcript_id "gene-C7A06_RS01355"; ID "gene-C7A06_RS01355"; Name "bcsZ"; Parent "nbis-gene-223"; gbkey "Gene"; gene "bcsZ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01355"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1361 NZ_CP027599.1 Protein Homology exon 256091 257197 . + . gene_id "nbis-gene-223"; transcript_id "gene-C7A06_RS01355"; Dbxref "Genbank:WP_001341948.1"; ID "nbis-exon-232"; Name "WP_001341948.1"; Ontology_term "GO:0005975" "GO:0004553"; Parent "gene-C7A06_RS01355"; gbkey "CDS"; gene "bcsZ"; go_function "hydrolase activity, hydrolyzing O-glycosyl compounds|0004553||IEA"; go_process "carbohydrate metabolic process|0005975||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312438.1"; locus_tag "C7A06_RS01355"; product "cellulose synthase complex periplasmic endoglucanase BcsZ"; protein_id "WP_001341948.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1362 NZ_CP027599.1 Protein Homology CDS 256091 257197 . + 0 gene_id "nbis-gene-223"; transcript_id "gene-C7A06_RS01355"; Dbxref "Genbank:WP_001341948.1"; ID "cds-WP_001341948.1"; Name "WP_001341948.1"; Ontology_term "GO:0005975" "GO:0004553"; Parent "gene-C7A06_RS01355"; gbkey "CDS"; gene "bcsZ"; go_function "hydrolase activity, hydrolyzing O-glycosyl compounds|0004553||IEA"; go_process "carbohydrate metabolic process|0005975||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312438.1"; locus_tag "C7A06_RS01355"; product "cellulose synthase complex periplasmic endoglucanase BcsZ"; protein_id "WP_001341948.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1363 NZ_CP027599.1 RefSeq gene 257179 260652 . + . gene_id "nbis-gene-224"; ID "nbis-gene-224"; Name "bcsC"; gbkey "Gene"; gene "bcsC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01360";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1364 NZ_CP027599.1 RefSeq transcript 257179 260652 . + . gene_id "nbis-gene-224"; transcript_id "gene-C7A06_RS01360"; ID "gene-C7A06_RS01360"; Name "bcsC"; Parent "nbis-gene-224"; gbkey "Gene"; gene "bcsC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01360"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1365 NZ_CP027599.1 Protein Homology exon 257179 260652 . + . gene_id "nbis-gene-224"; transcript_id "gene-C7A06_RS01360"; Dbxref "Genbank:WP_001225108.1"; ID "nbis-exon-233"; Name "WP_001225108.1"; Ontology_term "GO:0030244" "GO:0005515" "GO:0019867"; Parent "gene-C7A06_RS01360"; gbkey "CDS"; gene "bcsC"; go_component "outer membrane|0019867||IEA"; go_function "protein binding|0005515||IEA"; go_process "cellulose biosynthetic process|0030244||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026226.4"; locus_tag "C7A06_RS01360"; product "cellulose synthase complex outer membrane protein BcsC"; protein_id "WP_001225108.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1366 NZ_CP027599.1 Protein Homology CDS 257179 260652 . + 0 gene_id "nbis-gene-224"; transcript_id "gene-C7A06_RS01360"; Dbxref "Genbank:WP_001225108.1"; ID "cds-WP_001225108.1"; Name "WP_001225108.1"; Ontology_term "GO:0030244" "GO:0005515" "GO:0019867"; Parent "gene-C7A06_RS01360"; gbkey "CDS"; gene "bcsC"; go_component "outer membrane|0019867||IEA"; go_function "protein binding|0005515||IEA"; go_process "cellulose biosynthetic process|0030244||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026226.4"; locus_tag "C7A06_RS01360"; product "cellulose synthase complex outer membrane protein BcsC"; protein_id "WP_001225108.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1367 NZ_CP027599.1 RefSeq gene 260734 262722 . + . gene_id "nbis-gene-225"; ID "nbis-gene-225"; Name "hmsP"; gbkey "Gene"; gene "hmsP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01365";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1368 NZ_CP027599.1 RefSeq transcript 260734 262722 . + . gene_id "nbis-gene-225"; transcript_id "gene-C7A06_RS01365"; ID "gene-C7A06_RS01365"; Name "hmsP"; Parent "nbis-gene-225"; gbkey "Gene"; gene "hmsP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01365"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1369 NZ_CP027599.1 Protein Homology exon 260734 262722 . + . gene_id "nbis-gene-225"; transcript_id "gene-C7A06_RS01365"; Dbxref "Genbank:WP_001266286.1"; ID "nbis-exon-234"; Name "WP_001266286.1"; Ontology_term "GO:0007165"; Parent "gene-C7A06_RS01365"; gbkey "CDS"; gene "hmsP"; go_process "signal transduction|0007165||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417986.4"; locus_tag "C7A06_RS01365"; product "biofilm formation regulator HmsP"; protein_id "WP_001266286.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1370 NZ_CP027599.1 Protein Homology CDS 260734 262722 . + 0 gene_id "nbis-gene-225"; transcript_id "gene-C7A06_RS01365"; Dbxref "Genbank:WP_001266286.1"; ID "cds-WP_001266286.1"; Name "WP_001266286.1"; Ontology_term "GO:0007165"; Parent "gene-C7A06_RS01365"; gbkey "CDS"; gene "hmsP"; go_process "signal transduction|0007165||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417986.4"; locus_tag "C7A06_RS01365"; product "biofilm formation regulator HmsP"; protein_id "WP_001266286.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1371 NZ_CP027599.1 RefSeq gene 262905 264191 . + . gene_id "nbis-gene-226"; ID "nbis-gene-226"; Name "dctA"; gbkey "Gene"; gene "dctA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01375";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1372 NZ_CP027599.1 RefSeq transcript 262905 264191 . + . gene_id "nbis-gene-226"; transcript_id "gene-C7A06_RS01375"; ID "gene-C7A06_RS01375"; Name "dctA"; Parent "nbis-gene-226"; gbkey "Gene"; gene "dctA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01375"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1373 NZ_CP027599.1 Protein Homology exon 262905 264191 . + . gene_id "nbis-gene-226"; transcript_id "gene-C7A06_RS01375"; Dbxref "Genbank:WP_044164517.1"; ID "nbis-exon-235"; Name "WP_044164517.1"; Parent "gene-C7A06_RS01375"; gbkey "CDS"; gene "dctA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417985.1"; locus_tag "C7A06_RS01375"; product "C4-dicarboxylate transporter DctC"; protein_id "WP_044164517.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1374 NZ_CP027599.1 Protein Homology CDS 262905 264191 . + 0 gene_id "nbis-gene-226"; transcript_id "gene-C7A06_RS01375"; Dbxref "Genbank:WP_044164517.1"; ID "cds-WP_044164517.1"; Name "WP_044164517.1"; Parent "gene-C7A06_RS01375"; gbkey "CDS"; gene "dctA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417985.1"; locus_tag "C7A06_RS01375"; product "C4-dicarboxylate transporter DctC"; protein_id "WP_044164517.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1375 NZ_CP027599.1 RefSeq gene 264411 265907 . + . gene_id "nbis-gene-227"; ID "nbis-gene-227"; Name "yhjJ"; gbkey "Gene"; gene "yhjJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01385";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1376 NZ_CP027599.1 RefSeq transcript 264411 265907 . + . gene_id "nbis-gene-227"; transcript_id "gene-C7A06_RS01385"; ID "gene-C7A06_RS01385"; Name "yhjJ"; Parent "nbis-gene-227"; gbkey "Gene"; gene "yhjJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01385"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1377 NZ_CP027599.1 Protein Homology exon 264411 265907 . + . gene_id "nbis-gene-227"; transcript_id "gene-C7A06_RS01385"; Dbxref "Genbank:WP_001163135.1"; ID "nbis-exon-236"; Name "WP_001163135.1"; Parent "gene-C7A06_RS01385"; gbkey "CDS"; gene "yhjJ"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312434.1"; locus_tag "C7A06_RS01385"; product "insulinase family protein"; protein_id "WP_001163135.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1378 NZ_CP027599.1 Protein Homology CDS 264411 265907 . + 0 gene_id "nbis-gene-227"; transcript_id "gene-C7A06_RS01385"; Dbxref "Genbank:WP_001163135.1"; ID "cds-WP_001163135.1"; Name "WP_001163135.1"; Parent "gene-C7A06_RS01385"; gbkey "CDS"; gene "yhjJ"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312434.1"; locus_tag "C7A06_RS01385"; product "insulinase family protein"; protein_id "WP_001163135.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1379 NZ_CP027599.1 RefSeq gene 266003 266932 . - . gene_id "nbis-gene-228"; ID "nbis-gene-228"; Name "kdgK"; gbkey "Gene"; gene "kdgK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01390";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1380 NZ_CP027599.1 RefSeq transcript 266003 266932 . - . gene_id "nbis-gene-228"; transcript_id "gene-C7A06_RS01390"; ID "gene-C7A06_RS01390"; Name "kdgK"; Parent "nbis-gene-228"; gbkey "Gene"; gene "kdgK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01390"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1381 NZ_CP027599.1 Protein Homology exon 266003 266932 . - . gene_id "nbis-gene-228"; transcript_id "gene-C7A06_RS01390"; Dbxref "Genbank:WP_001296796.1"; ID "nbis-exon-237"; Name "WP_001296796.1"; Parent "gene-C7A06_RS01390"; gbkey "CDS"; gene "kdgK"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417983.2"; locus_tag "C7A06_RS01390"; product "2-dehydro-3-deoxygluconokinase"; protein_id "WP_001296796.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1382 NZ_CP027599.1 Protein Homology CDS 266003 266932 . - 0 gene_id "nbis-gene-228"; transcript_id "gene-C7A06_RS01390"; Dbxref "Genbank:WP_001296796.1"; ID "cds-WP_001296796.1"; Name "WP_001296796.1"; Parent "gene-C7A06_RS01390"; gbkey "CDS"; gene "kdgK"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417983.2"; locus_tag "C7A06_RS01390"; product "2-dehydro-3-deoxygluconokinase"; protein_id "WP_001296796.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1383 NZ_CP027599.1 RefSeq gene 267164 267931 . + . gene_id "nbis-gene-229"; ID "nbis-gene-229"; Name "pdeH"; gbkey "Gene"; gene "pdeH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01400";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1384 NZ_CP027599.1 RefSeq transcript 267164 267931 . + . gene_id "nbis-gene-229"; transcript_id "gene-C7A06_RS01400"; ID "gene-C7A06_RS01400"; Name "pdeH"; Parent "nbis-gene-229"; gbkey "Gene"; gene "pdeH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01400"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1385 NZ_CP027599.1 Protein Homology exon 267164 267931 . + . gene_id "nbis-gene-229"; transcript_id "gene-C7A06_RS01400"; Dbxref "Genbank:WP_001295219.1"; ID "nbis-exon-238"; Name "WP_001295219.1"; Parent "gene-C7A06_RS01400"; gbkey "CDS"; gene "pdeH"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417982.2"; locus_tag "C7A06_RS01400"; product "cyclic-guanylate-specific phosphodiesterase"; protein_id "WP_001295219.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1386 NZ_CP027599.1 Protein Homology CDS 267164 267931 . + 0 gene_id "nbis-gene-229"; transcript_id "gene-C7A06_RS01400"; Dbxref "Genbank:WP_001295219.1"; ID "cds-WP_001295219.1"; Name "WP_001295219.1"; Parent "gene-C7A06_RS01400"; gbkey "CDS"; gene "pdeH"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417982.2"; locus_tag "C7A06_RS01400"; product "cyclic-guanylate-specific phosphodiesterase"; protein_id "WP_001295219.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1387 NZ_CP027599.1 RefSeq gene 268001 270061 . + . gene_id "nbis-gene-230"; ID "nbis-gene-230"; Name "yhjG"; gbkey "Gene"; gene "yhjG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01405";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1388 NZ_CP027599.1 RefSeq transcript 268001 270061 . + . gene_id "nbis-gene-230"; transcript_id "gene-C7A06_RS01405"; ID "gene-C7A06_RS01405"; Name "yhjG"; Parent "nbis-gene-230"; gbkey "Gene"; gene "yhjG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01405"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1389 NZ_CP027599.1 Protein Homology exon 268001 270061 . + . gene_id "nbis-gene-230"; transcript_id "gene-C7A06_RS01405"; Dbxref "Genbank:WP_001344892.1"; ID "nbis-exon-239"; Name "WP_001344892.1"; Parent "gene-C7A06_RS01405"; gbkey "CDS"; gene "yhjG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417981.2"; locus_tag "C7A06_RS01405"; product "AsmA family protein"; protein_id "WP_001344892.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1390 NZ_CP027599.1 Protein Homology CDS 268001 270061 . + 0 gene_id "nbis-gene-230"; transcript_id "gene-C7A06_RS01405"; Dbxref "Genbank:WP_001344892.1"; ID "cds-WP_001344892.1"; Name "WP_001344892.1"; Parent "gene-C7A06_RS01405"; gbkey "CDS"; gene "yhjG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417981.2"; locus_tag "C7A06_RS01405"; product "AsmA family protein"; protein_id "WP_001344892.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1391 NZ_CP027599.1 RefSeq gene 270295 271617 . - . gene_id "nbis-gene-231"; ID "nbis-gene-231"; Name "yhjE"; gbkey "Gene"; gene "yhjE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01410";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1392 NZ_CP027599.1 RefSeq transcript 270295 271617 . - . gene_id "nbis-gene-231"; transcript_id "gene-C7A06_RS01410"; ID "gene-C7A06_RS01410"; Name "yhjE"; Parent "nbis-gene-231"; gbkey "Gene"; gene "yhjE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01410"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1393 NZ_CP027599.1 Protein Homology exon 270295 271617 . - . gene_id "nbis-gene-231"; transcript_id "gene-C7A06_RS01410"; Dbxref "Genbank:WP_001149002.1"; ID "nbis-exon-240"; Name "WP_001149002.1"; Parent "gene-C7A06_RS01410"; gbkey "CDS"; gene "yhjE"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417980.1"; locus_tag "C7A06_RS01410"; product "MHS family MFS transporter"; protein_id "WP_001149002.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1394 NZ_CP027599.1 Protein Homology CDS 270295 271617 . - 0 gene_id "nbis-gene-231"; transcript_id "gene-C7A06_RS01410"; Dbxref "Genbank:WP_001149002.1"; ID "cds-WP_001149002.1"; Name "WP_001149002.1"; Parent "gene-C7A06_RS01410"; gbkey "CDS"; gene "yhjE"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417980.1"; locus_tag "C7A06_RS01410"; product "MHS family MFS transporter"; protein_id "WP_001149002.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1395 NZ_CP027599.1 RefSeq gene 272028 273041 . - . gene_id "nbis-gene-232"; ID "nbis-gene-232"; Name "yhjD"; gbkey "Gene"; gene "yhjD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01415";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1396 NZ_CP027599.1 RefSeq transcript 272028 273041 . - . gene_id "nbis-gene-232"; transcript_id "gene-C7A06_RS01415"; ID "gene-C7A06_RS01415"; Name "yhjD"; Parent "nbis-gene-232"; gbkey "Gene"; gene "yhjD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01415"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1397 NZ_CP027599.1 Protein Homology exon 272028 273041 . - . gene_id "nbis-gene-232"; transcript_id "gene-C7A06_RS01415"; Dbxref "Genbank:WP_000191257.1"; ID "nbis-exon-241"; Name "WP_000191257.1"; Parent "gene-C7A06_RS01415"; gbkey "CDS"; gene "yhjD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312429.1"; locus_tag "C7A06_RS01415"; product "inner membrane protein YhjD"; protein_id "WP_000191257.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1398 NZ_CP027599.1 Protein Homology CDS 272028 273041 . - 0 gene_id "nbis-gene-232"; transcript_id "gene-C7A06_RS01415"; Dbxref "Genbank:WP_000191257.1"; ID "cds-WP_000191257.1"; Name "WP_000191257.1"; Parent "gene-C7A06_RS01415"; gbkey "CDS"; gene "yhjD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312429.1"; locus_tag "C7A06_RS01415"; product "inner membrane protein YhjD"; protein_id "WP_000191257.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1399 NZ_CP027599.1 RefSeq gene 273090 273989 . - . gene_id "nbis-gene-233"; ID "nbis-gene-233"; Name "rcdB"; gbkey "Gene"; gene "rcdB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01420";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1400 NZ_CP027599.1 RefSeq transcript 273090 273989 . - . gene_id "nbis-gene-233"; transcript_id "gene-C7A06_RS01420"; ID "gene-C7A06_RS01420"; Name "rcdB"; Parent "nbis-gene-233"; gbkey "Gene"; gene "rcdB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01420"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1401 NZ_CP027599.1 Protein Homology exon 273090 273989 . - . gene_id "nbis-gene-233"; transcript_id "gene-C7A06_RS01420"; Dbxref "Genbank:WP_001307449.1"; ID "nbis-exon-242"; Name "WP_001307449.1"; Parent "gene-C7A06_RS01420"; gbkey "CDS"; gene "rcdB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417978.2"; locus_tag "C7A06_RS01420"; product "LysR family transcriptional regulator"; protein_id "WP_001307449.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1402 NZ_CP027599.1 Protein Homology CDS 273090 273989 . - 0 gene_id "nbis-gene-233"; transcript_id "gene-C7A06_RS01420"; Dbxref "Genbank:WP_001307449.1"; ID "cds-WP_001307449.1"; Name "WP_001307449.1"; Parent "gene-C7A06_RS01420"; gbkey "CDS"; gene "rcdB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417978.2"; locus_tag "C7A06_RS01420"; product "LysR family transcriptional regulator"; protein_id "WP_001307449.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1403 NZ_CP027599.1 RefSeq gene 274509 275111 . + . gene_id "nbis-gene-234"; ID "nbis-gene-234"; Name "yhjB"; gbkey "Gene"; gene "yhjB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01425";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1404 NZ_CP027599.1 RefSeq transcript 274509 275111 . + . gene_id "nbis-gene-234"; transcript_id "gene-C7A06_RS01425"; ID "gene-C7A06_RS01425"; Name "yhjB"; Parent "nbis-gene-234"; gbkey "Gene"; gene "yhjB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01425"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1405 NZ_CP027599.1 Protein Homology exon 274509 275111 . + . gene_id "nbis-gene-234"; transcript_id "gene-C7A06_RS01425"; Dbxref "Genbank:WP_001167676.1"; ID "nbis-exon-243"; Name "WP_001167676.1"; Parent "gene-C7A06_RS01425"; gbkey "CDS"; gene "yhjB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417977.1"; locus_tag "C7A06_RS01425"; product "response regulator transcription factor"; protein_id "WP_001167676.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1406 NZ_CP027599.1 Protein Homology CDS 274509 275111 . + 0 gene_id "nbis-gene-234"; transcript_id "gene-C7A06_RS01425"; Dbxref "Genbank:WP_001167676.1"; ID "cds-WP_001167676.1"; Name "WP_001167676.1"; Parent "gene-C7A06_RS01425"; gbkey "CDS"; gene "yhjB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417977.1"; locus_tag "C7A06_RS01425"; product "response regulator transcription factor"; protein_id "WP_001167676.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1407 NZ_CP027599.1 RefSeq gene 275162 276811 . - . gene_id "nbis-gene-235"; ID "nbis-gene-235"; Name "treF"; gbkey "Gene"; gene "treF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01430";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1408 NZ_CP027599.1 RefSeq transcript 275162 276811 . - . gene_id "nbis-gene-235"; transcript_id "gene-C7A06_RS01430"; ID "gene-C7A06_RS01430"; Name "treF"; Parent "nbis-gene-235"; gbkey "Gene"; gene "treF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01430"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1409 NZ_CP027599.1 Protein Homology exon 275162 276811 . - . gene_id "nbis-gene-235"; transcript_id "gene-C7A06_RS01430"; Dbxref "Genbank:WP_000934218.1"; ID "nbis-exon-244"; Name "WP_000934218.1"; Parent "gene-C7A06_RS01430"; gbkey "CDS"; gene "treF"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709297.1"; locus_tag "C7A06_RS01430"; product "alpha,alpha-trehalase"; protein_id "WP_000934218.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1410 NZ_CP027599.1 Protein Homology CDS 275162 276811 . - 0 gene_id "nbis-gene-235"; transcript_id "gene-C7A06_RS01430"; Dbxref "Genbank:WP_000934218.1"; ID "cds-WP_000934218.1"; Name "WP_000934218.1"; Parent "gene-C7A06_RS01430"; gbkey "CDS"; gene "treF"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709297.1"; locus_tag "C7A06_RS01430"; product "alpha,alpha-trehalase"; protein_id "WP_000934218.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1411 NZ_CP027599.1 RefSeq gene 277216 278613 . + . gene_id "nbis-gene-236"; ID "nbis-gene-236"; Name "ccp"; gbkey "Gene"; gene "ccp"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01435";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1412 NZ_CP027599.1 RefSeq transcript 277216 278613 . + . gene_id "nbis-gene-236"; transcript_id "gene-C7A06_RS01435"; ID "gene-C7A06_RS01435"; Name "ccp"; Parent "nbis-gene-236"; gbkey "Gene"; gene "ccp"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01435"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1413 NZ_CP027599.1 Protein Homology exon 277216 278613 . + . gene_id "nbis-gene-236"; transcript_id "gene-C7A06_RS01435"; Dbxref "Genbank:WP_000784821.1"; ID "nbis-exon-245"; Name "WP_000784821.1"; Parent "gene-C7A06_RS01435"; gbkey "CDS"; gene "ccp"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312425.1"; locus_tag "C7A06_RS01435"; product "cytochrome c peroxidase"; protein_id "WP_000784821.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1414 NZ_CP027599.1 Protein Homology CDS 277216 278613 . + 0 gene_id "nbis-gene-236"; transcript_id "gene-C7A06_RS01435"; Dbxref "Genbank:WP_000784821.1"; ID "cds-WP_000784821.1"; Name "WP_000784821.1"; Parent "gene-C7A06_RS01435"; gbkey "CDS"; gene "ccp"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312425.1"; locus_tag "C7A06_RS01435"; product "cytochrome c peroxidase"; protein_id "WP_000784821.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1415 NZ_CP027599.1 RefSeq gene 278824 280224 . + . gene_id "nbis-gene-237"; ID "nbis-gene-237"; Name "gadA"; gbkey "Gene"; gene "gadA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01440";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1416 NZ_CP027599.1 RefSeq transcript 278824 280224 . + . gene_id "nbis-gene-237"; transcript_id "gene-C7A06_RS01440"; ID "gene-C7A06_RS01440"; Name "gadA"; Parent "nbis-gene-237"; gbkey "Gene"; gene "gadA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01440"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1417 NZ_CP027599.1 Protein Homology exon 278824 280224 . + . gene_id "nbis-gene-237"; transcript_id "gene-C7A06_RS01440"; Dbxref "Genbank:WP_000372240.1"; ID "nbis-exon-246"; Name "WP_000372240.1"; Ontology_term "GO:0006540" "GO:0004351"; Parent "gene-C7A06_RS01440"; gbkey "CDS"; gene "gadA"; go_function "glutamate decarboxylase activity|0004351||IEA"; go_process "glutamate decarboxylation to succinate|0006540||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417974.1"; locus_tag "C7A06_RS01440"; product "glutamate decarboxylase"; protein_id "WP_000372240.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1418 NZ_CP027599.1 Protein Homology CDS 278824 280224 . + 0 gene_id "nbis-gene-237"; transcript_id "gene-C7A06_RS01440"; Dbxref "Genbank:WP_000372240.1"; ID "cds-WP_000372240.1"; Name "WP_000372240.1"; Ontology_term "GO:0006540" "GO:0004351"; Parent "gene-C7A06_RS01440"; gbkey "CDS"; gene "gadA"; go_function "glutamate decarboxylase activity|0004351||IEA"; go_process "glutamate decarboxylation to succinate|0006540||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417974.1"; locus_tag "C7A06_RS01440"; product "glutamate decarboxylase"; protein_id "WP_000372240.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1419 NZ_CP027599.1 RefSeq gene 280594 281418 . + . gene_id "nbis-gene-238"; ID "nbis-gene-238"; Name "gadX"; gbkey "Gene"; gene "gadX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01445";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1420 NZ_CP027599.1 RefSeq transcript 280594 281418 . + . gene_id "nbis-gene-238"; transcript_id "gene-C7A06_RS01445"; ID "gene-C7A06_RS01445"; Name "gadX"; Parent "nbis-gene-238"; gbkey "Gene"; gene "gadX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01445"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1421 NZ_CP027599.1 Protein Homology exon 280594 281418 . + . gene_id "nbis-gene-238"; transcript_id "gene-C7A06_RS01445"; Dbxref "Genbank:WP_001191068.1"; ID "nbis-exon-247"; Name "WP_001191068.1"; Parent "gene-C7A06_RS01445"; gbkey "CDS"; gene "gadX"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709339.1"; locus_tag "C7A06_RS01445"; product "acid resistance transcriptional activator GadX"; protein_id "WP_001191068.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1422 NZ_CP027599.1 Protein Homology CDS 280594 281418 . + 0 gene_id "nbis-gene-238"; transcript_id "gene-C7A06_RS01445"; Dbxref "Genbank:WP_001191068.1"; ID "cds-WP_001191068.1"; Name "WP_001191068.1"; Parent "gene-C7A06_RS01445"; gbkey "CDS"; gene "gadX"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709339.1"; locus_tag "C7A06_RS01445"; product "acid resistance transcriptional activator GadX"; protein_id "WP_001191068.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1423 NZ_CP027599.1 RefSeq gene 281786 282514 . + . gene_id "nbis-gene-239"; ID "nbis-gene-239"; Name "gadW"; gbkey "Gene"; gene "gadW"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01450";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1424 NZ_CP027599.1 RefSeq transcript 281786 282514 . + . gene_id "nbis-gene-239"; transcript_id "gene-C7A06_RS01450"; ID "gene-C7A06_RS01450"; Name "gadW"; Parent "nbis-gene-239"; gbkey "Gene"; gene "gadW"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01450"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1425 NZ_CP027599.1 Protein Homology exon 281786 282514 . + . gene_id "nbis-gene-239"; transcript_id "gene-C7A06_RS01450"; Dbxref "Genbank:WP_000149991.1"; ID "nbis-exon-248"; Name "WP_000149991.1"; Parent "gene-C7A06_RS01450"; gbkey "CDS"; gene "gadW"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312422.1"; locus_tag "C7A06_RS01450"; product "acid resistance transcriptional activator GadW"; protein_id "WP_000149991.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1426 NZ_CP027599.1 Protein Homology CDS 281786 282514 . + 0 gene_id "nbis-gene-239"; transcript_id "gene-C7A06_RS01450"; Dbxref "Genbank:WP_000149991.1"; ID "cds-WP_000149991.1"; Name "WP_000149991.1"; Parent "gene-C7A06_RS01450"; gbkey "CDS"; gene "gadW"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312422.1"; locus_tag "C7A06_RS01450"; product "acid resistance transcriptional activator GadW"; protein_id "WP_000149991.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1427 NZ_CP027599.1 RefSeq gene 282877 285990 . - . gene_id "nbis-gene-240"; ID "nbis-gene-240"; Name "mdtF"; gbkey "Gene"; gene "mdtF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01460";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1428 NZ_CP027599.1 RefSeq transcript 282877 285990 . - . gene_id "nbis-gene-240"; transcript_id "gene-C7A06_RS01460"; ID "gene-C7A06_RS01460"; Name "mdtF"; Parent "nbis-gene-240"; gbkey "Gene"; gene "mdtF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01460"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1429 NZ_CP027599.1 Protein Homology exon 282877 285990 . - . gene_id "nbis-gene-240"; transcript_id "gene-C7A06_RS01460"; Dbxref "Genbank:WP_000024892.1"; ID "nbis-exon-249"; Name "WP_000024892.1"; Parent "gene-C7A06_RS01460"; gbkey "CDS"; gene "mdtF"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312421.1"; locus_tag "C7A06_RS01460"; product "multidrug efflux pump RND permease MdtF"; protein_id "WP_000024892.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1430 NZ_CP027599.1 Protein Homology CDS 282877 285990 . - 0 gene_id "nbis-gene-240"; transcript_id "gene-C7A06_RS01460"; Dbxref "Genbank:WP_000024892.1"; ID "cds-WP_000024892.1"; Name "WP_000024892.1"; Parent "gene-C7A06_RS01460"; gbkey "CDS"; gene "mdtF"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312421.1"; locus_tag "C7A06_RS01460"; product "multidrug efflux pump RND permease MdtF"; protein_id "WP_000024892.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1431 NZ_CP027599.1 RefSeq gene 286015 287172 . - . gene_id "nbis-gene-241"; ID "nbis-gene-241"; Name "mdtE"; gbkey "Gene"; gene "mdtE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01465";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1432 NZ_CP027599.1 RefSeq transcript 286015 287172 . - . gene_id "nbis-gene-241"; transcript_id "gene-C7A06_RS01465"; ID "gene-C7A06_RS01465"; Name "mdtE"; Parent "nbis-gene-241"; gbkey "Gene"; gene "mdtE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01465"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1433 NZ_CP027599.1 Protein Homology exon 286015 287172 . - . gene_id "nbis-gene-241"; transcript_id "gene-C7A06_RS01465"; Dbxref "Genbank:WP_001081984.1"; ID "nbis-exon-250"; Name "WP_001081984.1"; Parent "gene-C7A06_RS01465"; gbkey "CDS"; gene "mdtE"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417970.1"; locus_tag "C7A06_RS01465"; product "multidrug transporter subunit MdtE"; protein_id "WP_001081984.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1434 NZ_CP027599.1 Protein Homology CDS 286015 287172 . - 0 gene_id "nbis-gene-241"; transcript_id "gene-C7A06_RS01465"; Dbxref "Genbank:WP_001081984.1"; ID "cds-WP_001081984.1"; Name "WP_001081984.1"; Parent "gene-C7A06_RS01465"; gbkey "CDS"; gene "mdtE"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417970.1"; locus_tag "C7A06_RS01465"; product "multidrug transporter subunit MdtE"; protein_id "WP_001081984.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1435 NZ_CP027599.1 RefSeq gene 287232 287510 . + . gene_id "nbis-gene-242"; ID "nbis-gene-242"; Name "C7A06_RS01470"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01470";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1436 NZ_CP027599.1 RefSeq transcript 287232 287510 . + . gene_id "nbis-gene-242"; transcript_id "gene-C7A06_RS01470"; ID "gene-C7A06_RS01470"; Name "C7A06_RS01470"; Parent "nbis-gene-242"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01470"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1437 NZ_CP027599.1 Protein Homology exon 287232 287510 . + . gene_id "nbis-gene-242"; transcript_id "gene-C7A06_RS01470"; Dbxref "Genbank:WP_001205329.1"; ID "nbis-exon-251"; Name "WP_001205329.1"; Parent "gene-C7A06_RS01470"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_009502656.1"; locus_tag "C7A06_RS01470"; product "hypothetical protein"; protein_id "WP_001205329.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1438 NZ_CP027599.1 Protein Homology CDS 287232 287510 . + 0 gene_id "nbis-gene-242"; transcript_id "gene-C7A06_RS01470"; Dbxref "Genbank:WP_001205329.1"; ID "cds-WP_001205329.1"; Name "WP_001205329.1"; Parent "gene-C7A06_RS01470"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_009502656.1"; locus_tag "C7A06_RS01470"; product "hypothetical protein"; protein_id "WP_001205329.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1439 NZ_CP027599.1 RefSeq gene 287511 288038 . - . gene_id "nbis-gene-243"; ID "nbis-gene-243"; Name "gadE"; gbkey "Gene"; gene "gadE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01475";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1440 NZ_CP027599.1 RefSeq transcript 287511 288038 . - . gene_id "nbis-gene-243"; transcript_id "gene-C7A06_RS01475"; ID "gene-C7A06_RS01475"; Name "gadE"; Parent "nbis-gene-243"; gbkey "Gene"; gene "gadE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01475"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1441 NZ_CP027599.1 Protein Homology exon 287511 288038 . - . gene_id "nbis-gene-243"; transcript_id "gene-C7A06_RS01475"; Dbxref "Genbank:WP_000576690.1"; ID "nbis-exon-252"; Name "WP_000576690.1"; Parent "gene-C7A06_RS01475"; gbkey "CDS"; gene "gadE"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312419.1"; locus_tag "C7A06_RS01475"; product "acid resistance transcriptional activator GadE"; protein_id "WP_000576690.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1442 NZ_CP027599.1 Protein Homology CDS 287511 288038 . - 0 gene_id "nbis-gene-243"; transcript_id "gene-C7A06_RS01475"; Dbxref "Genbank:WP_000576690.1"; ID "cds-WP_000576690.1"; Name "WP_000576690.1"; Parent "gene-C7A06_RS01475"; gbkey "CDS"; gene "gadE"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312419.1"; locus_tag "C7A06_RS01475"; product "acid resistance transcriptional activator GadE"; protein_id "WP_000576690.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1443 NZ_CP027599.1 RefSeq gene 288837 289409 . - . gene_id "nbis-gene-244"; ID "nbis-gene-244"; Name "hdeD"; gbkey "Gene"; gene "hdeD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01480";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1444 NZ_CP027599.1 RefSeq transcript 288837 289409 . - . gene_id "nbis-gene-244"; transcript_id "gene-C7A06_RS01480"; ID "gene-C7A06_RS01480"; Name "hdeD"; Parent "nbis-gene-244"; gbkey "Gene"; gene "hdeD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01480"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1445 NZ_CP027599.1 Protein Homology exon 288837 289409 . - . gene_id "nbis-gene-244"; transcript_id "gene-C7A06_RS01480"; Dbxref "Genbank:WP_000965672.1"; ID "nbis-exon-253"; Name "WP_000965672.1"; Parent "gene-C7A06_RS01480"; gbkey "CDS"; gene "hdeD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312418.1"; locus_tag "C7A06_RS01480"; product "acid-resistance protein HdeD"; protein_id "WP_000965672.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1446 NZ_CP027599.1 Protein Homology CDS 288837 289409 . - 0 gene_id "nbis-gene-244"; transcript_id "gene-C7A06_RS01480"; Dbxref "Genbank:WP_000965672.1"; ID "cds-WP_000965672.1"; Name "WP_000965672.1"; Parent "gene-C7A06_RS01480"; gbkey "CDS"; gene "hdeD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312418.1"; locus_tag "C7A06_RS01480"; product "acid-resistance protein HdeD"; protein_id "WP_000965672.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1447 NZ_CP027599.1 RefSeq gene 289664 289996 . + . gene_id "nbis-gene-245"; ID "nbis-gene-245"; Name "hdeA"; gbkey "Gene"; gene "hdeA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01485";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1448 NZ_CP027599.1 RefSeq transcript 289664 289996 . + . gene_id "nbis-gene-245"; transcript_id "gene-C7A06_RS01485"; ID "gene-C7A06_RS01485"; Name "hdeA"; Parent "nbis-gene-245"; gbkey "Gene"; gene "hdeA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01485"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1449 NZ_CP027599.1 Protein Homology exon 289664 289996 . + . gene_id "nbis-gene-245"; transcript_id "gene-C7A06_RS01485"; Dbxref "Genbank:WP_000756550.1"; ID "nbis-exon-254"; Name "WP_000756550.1"; Parent "gene-C7A06_RS01485"; gbkey "CDS"; gene "hdeA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312417.1"; locus_tag "C7A06_RS01485"; product "acid-activated periplasmic chaperone HdeA"; protein_id "WP_000756550.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1450 NZ_CP027599.1 Protein Homology CDS 289664 289996 . + 0 gene_id "nbis-gene-245"; transcript_id "gene-C7A06_RS01485"; Dbxref "Genbank:WP_000756550.1"; ID "cds-WP_000756550.1"; Name "WP_000756550.1"; Parent "gene-C7A06_RS01485"; gbkey "CDS"; gene "hdeA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312417.1"; locus_tag "C7A06_RS01485"; product "acid-activated periplasmic chaperone HdeA"; protein_id "WP_000756550.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1451 NZ_CP027599.1 RefSeq gene 290112 290438 . + . gene_id "nbis-gene-246"; ID "nbis-gene-246"; Name "hdeB"; gbkey "Gene"; gene "hdeB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01490";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1452 NZ_CP027599.1 RefSeq transcript 290112 290438 . + . gene_id "nbis-gene-246"; transcript_id "gene-C7A06_RS01490"; ID "gene-C7A06_RS01490"; Name "hdeB"; Parent "nbis-gene-246"; gbkey "Gene"; gene "hdeB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01490"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1453 NZ_CP027599.1 Protein Homology exon 290112 290438 . + . gene_id "nbis-gene-246"; transcript_id "gene-C7A06_RS01490"; Dbxref "Genbank:WP_001298717.1"; ID "nbis-exon-255"; Name "WP_001298717.1"; Parent "gene-C7A06_RS01490"; gbkey "CDS"; gene "hdeB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417966.4"; locus_tag "C7A06_RS01490"; product "acid-activated periplasmic chaperone HdeB"; protein_id "WP_001298717.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1454 NZ_CP027599.1 Protein Homology CDS 290112 290438 . + 0 gene_id "nbis-gene-246"; transcript_id "gene-C7A06_RS01490"; Dbxref "Genbank:WP_001298717.1"; ID "cds-WP_001298717.1"; Name "WP_001298717.1"; Parent "gene-C7A06_RS01490"; gbkey "CDS"; gene "hdeB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417966.4"; locus_tag "C7A06_RS01490"; product "acid-activated periplasmic chaperone HdeB"; protein_id "WP_001298717.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1455 NZ_CP027599.1 RefSeq gene 290502 291149 . + . gene_id "nbis-gene-247"; ID "nbis-gene-247"; Name "yhiD"; gbkey "Gene"; gene "yhiD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01495";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1456 NZ_CP027599.1 RefSeq transcript 290502 291149 . + . gene_id "nbis-gene-247"; transcript_id "gene-C7A06_RS01495"; ID "gene-C7A06_RS01495"; Name "yhiD"; Parent "nbis-gene-247"; gbkey "Gene"; gene "yhiD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01495"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1457 NZ_CP027599.1 Protein Homology exon 290502 291149 . + . gene_id "nbis-gene-247"; transcript_id "gene-C7A06_RS01495"; Dbxref "Genbank:WP_001341943.1"; ID "nbis-exon-256"; Name "WP_001341943.1"; Parent "gene-C7A06_RS01495"; gbkey "CDS"; gene "yhiD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417965.1"; locus_tag "C7A06_RS01495"; product "MgtC/SapB family protein"; protein_id "WP_001341943.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1458 NZ_CP027599.1 Protein Homology CDS 290502 291149 . + 0 gene_id "nbis-gene-247"; transcript_id "gene-C7A06_RS01495"; Dbxref "Genbank:WP_001341943.1"; ID "cds-WP_001341943.1"; Name "WP_001341943.1"; Parent "gene-C7A06_RS01495"; gbkey "CDS"; gene "yhiD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417965.1"; locus_tag "C7A06_RS01495"; product "MgtC/SapB family protein"; protein_id "WP_001341943.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1459 NZ_CP027599.1 RefSeq gene 291191 291721 . - . gene_id "nbis-gene-248"; ID "nbis-gene-248"; Name "dctR"; gbkey "Gene"; gene "dctR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01500";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1460 NZ_CP027599.1 RefSeq transcript 291191 291721 . - . gene_id "nbis-gene-248"; transcript_id "gene-C7A06_RS01500"; ID "gene-C7A06_RS01500"; Name "dctR"; Parent "nbis-gene-248"; gbkey "Gene"; gene "dctR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01500"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1461 NZ_CP027599.1 Protein Homology exon 291191 291721 . - . gene_id "nbis-gene-248"; transcript_id "gene-C7A06_RS01500"; Dbxref "Genbank:WP_000478623.1"; ID "nbis-exon-257"; Name "WP_000478623.1"; Ontology_term "GO:0006355"; Parent "gene-C7A06_RS01500"; gbkey "CDS"; gene "dctR"; go_process "regulation of transcription, DNA-templated|0006355||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709290.2"; locus_tag "C7A06_RS01500"; product "LuxR C-terminal-related transcriptional regulator"; protein_id "WP_000478623.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1462 NZ_CP027599.1 Protein Homology CDS 291191 291721 . - 0 gene_id "nbis-gene-248"; transcript_id "gene-C7A06_RS01500"; Dbxref "Genbank:WP_000478623.1"; ID "cds-WP_000478623.1"; Name "WP_000478623.1"; Ontology_term "GO:0006355"; Parent "gene-C7A06_RS01500"; gbkey "CDS"; gene "dctR"; go_process "regulation of transcription, DNA-templated|0006355||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709290.2"; locus_tag "C7A06_RS01500"; product "LuxR C-terminal-related transcriptional regulator"; protein_id "WP_000478623.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1463 NZ_CP027599.1 RefSeq gene 291877 292443 . - . gene_id "nbis-gene-249"; ID "nbis-gene-249"; Name "slp"; gbkey "Gene"; gene "slp"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01510";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1464 NZ_CP027599.1 RefSeq transcript 291877 292443 . - . gene_id "nbis-gene-249"; transcript_id "gene-C7A06_RS01510"; ID "gene-C7A06_RS01510"; Name "slp"; Parent "nbis-gene-249"; gbkey "Gene"; gene "slp"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01510"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1465 NZ_CP027599.1 Protein Homology exon 291877 292443 . - . gene_id "nbis-gene-249"; transcript_id "gene-C7A06_RS01510"; Dbxref "Genbank:WP_001057453.1"; ID "nbis-exon-258"; Name "WP_001057453.1"; Parent "gene-C7A06_RS01510"; gbkey "CDS"; gene "slp"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312404.2"; locus_tag "C7A06_RS01510"; product "outer membrane lipoprotein Slp"; protein_id "WP_001057453.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1466 NZ_CP027599.1 Protein Homology CDS 291877 292443 . - 0 gene_id "nbis-gene-249"; transcript_id "gene-C7A06_RS01510"; Dbxref "Genbank:WP_001057453.1"; ID "cds-WP_001057453.1"; Name "WP_001057453.1"; Parent "gene-C7A06_RS01510"; gbkey "CDS"; gene "slp"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312404.2"; locus_tag "C7A06_RS01510"; product "outer membrane lipoprotein Slp"; protein_id "WP_001057453.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1467 NZ_CP027599.1 RefSeq gene 292798 293913 . - . gene_id "nbis-pseudogene-291"; ID "nbis-pseudogene-291"; Name "C7A06_RS34385"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS34385"; original_biotype "pseudogene"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1468 NZ_CP027599.1 RefSeq transcript 292798 293913 . - . gene_id "nbis-pseudogene-291"; transcript_id "gene-C7A06_RS34385"; ID "gene-C7A06_RS34385"; Name "C7A06_RS34385"; Parent "nbis-pseudogene-291"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS34385"; original_biotype "mrna"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1469 NZ_CP027599.1 Protein Homology exon 292798 293913 . - . gene_id "nbis-pseudogene-291"; transcript_id "gene-C7A06_RS34385"; ID "nbis-exon-6064"; Note "frameshifted; internal stop"; Parent "gene-C7A06_RS34385"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312403.1"; locus_tag "C7A06_RS34385"; product "hypothetical protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1470 NZ_CP027599.1 Protein Homology CDS 292798 293913 . - 0 gene_id "nbis-pseudogene-291"; transcript_id "gene-C7A06_RS34385"; ID "cds-C7A06_RS34385"; Note "frameshifted; internal stop"; Parent "gene-C7A06_RS34385"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312403.1"; locus_tag "C7A06_RS34385"; product "hypothetical protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1471 NZ_CP027599.1 RefSeq gene 294493 295494 . - . gene_id "nbis-gene-250"; ID "nbis-gene-250"; Name "C7A06_RS01520"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01520";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1472 NZ_CP027599.1 RefSeq transcript 294493 295494 . - . gene_id "nbis-gene-250"; transcript_id "gene-C7A06_RS01520"; ID "gene-C7A06_RS01520"; Name "C7A06_RS01520"; Parent "nbis-gene-250"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01520"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1473 NZ_CP027599.1 Protein Homology exon 294493 295494 . - . gene_id "nbis-gene-250"; transcript_id "gene-C7A06_RS01520"; Dbxref "Genbank:WP_000100276.1"; ID "nbis-exon-259"; Name "WP_000100276.1"; Parent "gene-C7A06_RS01520"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000100290.1"; locus_tag "C7A06_RS01520"; product "permease"; protein_id "WP_000100276.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1474 NZ_CP027599.1 Protein Homology CDS 294493 295494 . - 0 gene_id "nbis-gene-250"; transcript_id "gene-C7A06_RS01520"; Dbxref "Genbank:WP_000100276.1"; ID "cds-WP_000100276.1"; Name "WP_000100276.1"; Parent "gene-C7A06_RS01520"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000100290.1"; locus_tag "C7A06_RS01520"; product "permease"; protein_id "WP_000100276.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1475 NZ_CP027599.1 RefSeq gene 295601 295897 . + . gene_id "nbis-gene-251"; ID "nbis-gene-251"; Name "C7A06_RS01525"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01525";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1476 NZ_CP027599.1 RefSeq transcript 295601 295897 . + . gene_id "nbis-gene-251"; transcript_id "gene-C7A06_RS01525"; ID "gene-C7A06_RS01525"; Name "C7A06_RS01525"; Parent "nbis-gene-251"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01525"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1477 NZ_CP027599.1 Protein Homology exon 295601 295897 . + . gene_id "nbis-gene-251"; transcript_id "gene-C7A06_RS01525"; Dbxref "Genbank:WP_001175589.1"; ID "nbis-exon-260"; Name "WP_001175589.1"; Parent "gene-C7A06_RS01525"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001465662.1"; locus_tag "C7A06_RS01525"; product "helix-turn-helix domain-containing protein"; protein_id "WP_001175589.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1478 NZ_CP027599.1 Protein Homology CDS 295601 295897 . + 0 gene_id "nbis-gene-251"; transcript_id "gene-C7A06_RS01525"; Dbxref "Genbank:WP_001175589.1"; ID "cds-WP_001175589.1"; Name "WP_001175589.1"; Parent "gene-C7A06_RS01525"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001465662.1"; locus_tag "C7A06_RS01525"; product "helix-turn-helix domain-containing protein"; protein_id "WP_001175589.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1479 NZ_CP027599.1 RefSeq gene 296031 296456 . - . gene_id "nbis-gene-252"; ID "nbis-gene-252"; Name "arsC"; gbkey "Gene"; gene "arsC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01530";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1480 NZ_CP027599.1 RefSeq transcript 296031 296456 . - . gene_id "nbis-gene-252"; transcript_id "gene-C7A06_RS01530"; ID "gene-C7A06_RS01530"; Name "arsC"; Parent "nbis-gene-252"; gbkey "Gene"; gene "arsC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01530"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1481 NZ_CP027599.1 Protein Homology exon 296031 296456 . - . gene_id "nbis-gene-252"; transcript_id "gene-C7A06_RS01530"; Dbxref "Genbank:WP_000065769.1"; ID "nbis-exon-261"; Name "WP_000065769.1"; Ontology_term "GO:0008794"; Parent "gene-C7A06_RS01530"; gbkey "CDS"; gene "arsC"; go_function "arsenate reductase (glutaredoxin) activity|0008794||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417960.1"; locus_tag "C7A06_RS01530"; product "glutaredoxin-dependent arsenate reductase"; protein_id "WP_000065769.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1482 NZ_CP027599.1 Protein Homology CDS 296031 296456 . - 0 gene_id "nbis-gene-252"; transcript_id "gene-C7A06_RS01530"; Dbxref "Genbank:WP_000065769.1"; ID "cds-WP_000065769.1"; Name "WP_000065769.1"; Ontology_term "GO:0008794"; Parent "gene-C7A06_RS01530"; gbkey "CDS"; gene "arsC"; go_function "arsenate reductase (glutaredoxin) activity|0008794||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417960.1"; locus_tag "C7A06_RS01530"; product "glutaredoxin-dependent arsenate reductase"; protein_id "WP_000065769.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1483 NZ_CP027599.1 RefSeq gene 296469 297758 . - . gene_id "nbis-gene-253"; ID "nbis-gene-253"; Name "arsB"; gbkey "Gene"; gene "arsB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01535";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1484 NZ_CP027599.1 RefSeq transcript 296469 297758 . - . gene_id "nbis-gene-253"; transcript_id "gene-C7A06_RS01535"; ID "gene-C7A06_RS01535"; Name "arsB"; Parent "nbis-gene-253"; gbkey "Gene"; gene "arsB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01535"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1485 NZ_CP027599.1 Protein Homology exon 296469 297758 . - . gene_id "nbis-gene-253"; transcript_id "gene-C7A06_RS01535"; Dbxref "Genbank:WP_000922639.1"; ID "nbis-exon-262"; Name "WP_000922639.1"; Parent "gene-C7A06_RS01535"; gbkey "CDS"; gene "arsB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312401.1"; locus_tag "C7A06_RS01535"; product "arsenite/antimonite:H(+) antiporter ArsB"; protein_id "WP_000922639.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1486 NZ_CP027599.1 Protein Homology CDS 296469 297758 . - 0 gene_id "nbis-gene-253"; transcript_id "gene-C7A06_RS01535"; Dbxref "Genbank:WP_000922639.1"; ID "cds-WP_000922639.1"; Name "WP_000922639.1"; Parent "gene-C7A06_RS01535"; gbkey "CDS"; gene "arsB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312401.1"; locus_tag "C7A06_RS01535"; product "arsenite/antimonite:H(+) antiporter ArsB"; protein_id "WP_000922639.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1487 NZ_CP027599.1 RefSeq gene 297812 298165 . - . gene_id "nbis-gene-254"; ID "nbis-gene-254"; Name "arsR"; gbkey "Gene"; gene "arsR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01540";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1488 NZ_CP027599.1 RefSeq transcript 297812 298165 . - . gene_id "nbis-gene-254"; transcript_id "gene-C7A06_RS01540"; ID "gene-C7A06_RS01540"; Name "arsR"; Parent "nbis-gene-254"; gbkey "Gene"; gene "arsR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01540"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1489 NZ_CP027599.1 Protein Homology exon 297812 298165 . - . gene_id "nbis-gene-254"; transcript_id "gene-C7A06_RS01540"; Dbxref "Genbank:WP_000008957.1"; ID "nbis-exon-263"; Name "WP_000008957.1"; Parent "gene-C7A06_RS01540"; gbkey "CDS"; gene "arsR"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417958.1"; locus_tag "C7A06_RS01540"; product "As(III)-sensing metalloregulatory transcriptional repressor ArsR"; protein_id "WP_000008957.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1490 NZ_CP027599.1 Protein Homology CDS 297812 298165 . - 0 gene_id "nbis-gene-254"; transcript_id "gene-C7A06_RS01540"; Dbxref "Genbank:WP_000008957.1"; ID "cds-WP_000008957.1"; Name "WP_000008957.1"; Parent "gene-C7A06_RS01540"; gbkey "CDS"; gene "arsR"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417958.1"; locus_tag "C7A06_RS01540"; product "As(III)-sensing metalloregulatory transcriptional repressor ArsR"; protein_id "WP_000008957.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1491 NZ_CP027599.1 RefSeq gene 298905 298988 . + . gene_id "nbis-gene-255"; ID "nbis-gene-255"; Name "dinQ"; gbkey "Gene"; gene "dinQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01550";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1492 NZ_CP027599.1 RefSeq transcript 298905 298988 . + . gene_id "nbis-gene-255"; transcript_id "gene-C7A06_RS01550"; ID "gene-C7A06_RS01550"; Name "dinQ"; Parent "nbis-gene-255"; gbkey "Gene"; gene "dinQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01550"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1493 NZ_CP027599.1 Protein Homology exon 298905 298988 . + . gene_id "nbis-gene-255"; transcript_id "gene-C7A06_RS01550"; Dbxref "Genbank:WP_001295215.1"; ID "nbis-exon-264"; Name "WP_001295215.1"; Parent "gene-C7A06_RS01550"; gbkey "CDS"; gene "dinQ"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_001165328.2"; locus_tag "C7A06_RS01550"; product "hypothetical protein"; protein_id "WP_001295215.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1494 NZ_CP027599.1 Protein Homology CDS 298905 298988 . + 0 gene_id "nbis-gene-255"; transcript_id "gene-C7A06_RS01550"; Dbxref "Genbank:WP_001295215.1"; ID "cds-WP_001295215.1"; Name "WP_001295215.1"; Parent "gene-C7A06_RS01550"; gbkey "CDS"; gene "dinQ"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_001165328.2"; locus_tag "C7A06_RS01550"; product "hypothetical protein"; protein_id "WP_001295215.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1495 NZ_CP027599.1 RefSeq gene 299042 300394 . - . gene_id "nbis-gene-256"; ID "nbis-gene-256"; Name "gorA"; gbkey "Gene"; gene "gorA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01555";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1496 NZ_CP027599.1 RefSeq transcript 299042 300394 . - . gene_id "nbis-gene-256"; transcript_id "gene-C7A06_RS01555"; ID "gene-C7A06_RS01555"; Name "gorA"; Parent "nbis-gene-256"; gbkey "Gene"; gene "gorA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01555"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1497 NZ_CP027599.1 Protein Homology exon 299042 300394 . - . gene_id "nbis-gene-256"; transcript_id "gene-C7A06_RS01555"; Dbxref "Genbank:WP_000160808.1"; ID "nbis-exon-265"; Name "WP_000160808.1"; Ontology_term "GO:0006749" "GO:0045454" "GO:0004362" "GO:0050660" "GO:0050661"; Parent "gene-C7A06_RS01555"; gbkey "CDS"; gene "gorA"; go_function "glutathione-disulfide reductase (NADPH) activity|0004362||IEA" "flavin adenine dinucleotide binding|0050660||IEA" "NADP binding|0050661||IEA"; go_process "glutathione metabolic process|0006749||IEA" "cell redox homeostasis|0045454||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1"; locus_tag "C7A06_RS01555"; product "glutathione-disulfide reductase"; protein_id "WP_000160808.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1498 NZ_CP027599.1 Protein Homology CDS 299042 300394 . - 0 gene_id "nbis-gene-256"; transcript_id "gene-C7A06_RS01555"; Dbxref "Genbank:WP_000160808.1"; ID "cds-WP_000160808.1"; Name "WP_000160808.1"; Ontology_term "GO:0006749" "GO:0045454" "GO:0004362" "GO:0050660" "GO:0050661"; Parent "gene-C7A06_RS01555"; gbkey "CDS"; gene "gorA"; go_function "glutathione-disulfide reductase (NADPH) activity|0004362||IEA" "flavin adenine dinucleotide binding|0050660||IEA" "NADP binding|0050661||IEA"; go_process "glutathione metabolic process|0006749||IEA" "cell redox homeostasis|0045454||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1"; locus_tag "C7A06_RS01555"; product "glutathione-disulfide reductase"; protein_id "WP_000160808.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1499 NZ_CP027599.1 RefSeq gene 300466 301308 . - . gene_id "nbis-gene-257"; ID "nbis-gene-257"; Name "rlmJ"; gbkey "Gene"; gene "rlmJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01560";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1500 NZ_CP027599.1 RefSeq transcript 300466 301308 . - . gene_id "nbis-gene-257"; transcript_id "gene-C7A06_RS01560"; ID "gene-C7A06_RS01560"; Name "rlmJ"; Parent "nbis-gene-257"; gbkey "Gene"; gene "rlmJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01560"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1501 NZ_CP027599.1 Protein Homology exon 300466 301308 . - . gene_id "nbis-gene-257"; transcript_id "gene-C7A06_RS01560"; Dbxref "Genbank:WP_000954225.1"; ID "nbis-exon-266"; Name "WP_000954225.1"; Parent "gene-C7A06_RS01560"; gbkey "CDS"; gene "rlmJ"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312398.1"; locus_tag "C7A06_RS01560"; product "23S rRNA (adenine(2030)-N(6))-methyltransferase"; protein_id "WP_000954225.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1502 NZ_CP027599.1 Protein Homology CDS 300466 301308 . - 0 gene_id "nbis-gene-257"; transcript_id "gene-C7A06_RS01560"; Dbxref "Genbank:WP_000954225.1"; ID "cds-WP_000954225.1"; Name "WP_000954225.1"; Parent "gene-C7A06_RS01560"; gbkey "CDS"; gene "rlmJ"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312398.1"; locus_tag "C7A06_RS01560"; product "23S rRNA (adenine(2030)-N(6))-methyltransferase"; protein_id "WP_000954225.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1503 NZ_CP027599.1 RefSeq gene 301511 303553 . + . gene_id "nbis-gene-258"; ID "nbis-gene-258"; Name "prlC"; gbkey "Gene"; gene "prlC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01565";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1504 NZ_CP027599.1 RefSeq transcript 301511 303553 . + . gene_id "nbis-gene-258"; transcript_id "gene-C7A06_RS01565"; ID "gene-C7A06_RS01565"; Name "prlC"; Parent "nbis-gene-258"; gbkey "Gene"; gene "prlC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01565"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1505 NZ_CP027599.1 Protein Homology exon 301511 303553 . + . gene_id "nbis-gene-258"; transcript_id "gene-C7A06_RS01565"; Dbxref "Genbank:WP_001341942.1"; ID "nbis-exon-267"; Name "WP_001341942.1"; Ontology_term "GO:0006508" "GO:0004222"; Parent "gene-C7A06_RS01565"; gbkey "CDS"; gene "prlC"; go_function "metalloendopeptidase activity|0004222||IEA"; go_process "proteolysis|0006508||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1"; locus_tag "C7A06_RS01565"; product "oligopeptidase A"; protein_id "WP_001341942.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1506 NZ_CP027599.1 Protein Homology CDS 301511 303553 . + 0 gene_id "nbis-gene-258"; transcript_id "gene-C7A06_RS01565"; Dbxref "Genbank:WP_001341942.1"; ID "cds-WP_001341942.1"; Name "WP_001341942.1"; Ontology_term "GO:0006508" "GO:0004222"; Parent "gene-C7A06_RS01565"; gbkey "CDS"; gene "prlC"; go_function "metalloendopeptidase activity|0004222||IEA"; go_process "proteolysis|0006508||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1"; locus_tag "C7A06_RS01565"; product "oligopeptidase A"; protein_id "WP_001341942.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1507 NZ_CP027599.1 RefSeq gene 303561 304313 . + . gene_id "nbis-gene-259"; ID "nbis-gene-259"; Name "rsmJ"; gbkey "Gene"; gene "rsmJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01570";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1508 NZ_CP027599.1 RefSeq transcript 303561 304313 . + . gene_id "nbis-gene-259"; transcript_id "gene-C7A06_RS01570"; ID "gene-C7A06_RS01570"; Name "rsmJ"; Parent "nbis-gene-259"; gbkey "Gene"; gene "rsmJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01570"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1509 NZ_CP027599.1 Protein Homology exon 303561 304313 . + . gene_id "nbis-gene-259"; transcript_id "gene-C7A06_RS01570"; Dbxref "Genbank:WP_000686608.1"; ID "nbis-exon-268"; Name "WP_000686608.1"; Ontology_term "GO:0031167" "GO:0008990"; Parent "gene-C7A06_RS01570"; gbkey "CDS"; gene "rsmJ"; go_function "rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA"; go_process "rRNA methylation|0031167||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709277.2"; locus_tag "C7A06_RS01570"; product "16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ"; protein_id "WP_000686608.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1510 NZ_CP027599.1 Protein Homology CDS 303561 304313 . + 0 gene_id "nbis-gene-259"; transcript_id "gene-C7A06_RS01570"; Dbxref "Genbank:WP_000686608.1"; ID "cds-WP_000686608.1"; Name "WP_000686608.1"; Ontology_term "GO:0031167" "GO:0008990"; Parent "gene-C7A06_RS01570"; gbkey "CDS"; gene "rsmJ"; go_function "rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA"; go_process "rRNA methylation|0031167||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709277.2"; locus_tag "C7A06_RS01570"; product "16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ"; protein_id "WP_000686608.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1511 NZ_CP027599.1 RefSeq gene 304362 305831 . - . gene_id "nbis-gene-260"; ID "nbis-gene-260"; Name "dtpB"; gbkey "Gene"; gene "dtpB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01575";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1512 NZ_CP027599.1 RefSeq transcript 304362 305831 . - . gene_id "nbis-gene-260"; transcript_id "gene-C7A06_RS01575"; ID "gene-C7A06_RS01575"; Name "dtpB"; Parent "nbis-gene-260"; gbkey "Gene"; gene "dtpB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01575"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1513 NZ_CP027599.1 Protein Homology exon 304362 305831 . - . gene_id "nbis-gene-260"; transcript_id "gene-C7A06_RS01575"; Dbxref "Genbank:WP_001098647.1"; ID "nbis-exon-269"; Name "WP_001098647.1"; Parent "gene-C7A06_RS01575"; gbkey "CDS"; gene "dtpB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417953.1"; locus_tag "C7A06_RS01575"; product "dipeptide/tripeptide permease DtpB"; protein_id "WP_001098647.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1514 NZ_CP027599.1 Protein Homology CDS 304362 305831 . - 0 gene_id "nbis-gene-260"; transcript_id "gene-C7A06_RS01575"; Dbxref "Genbank:WP_001098647.1"; ID "cds-WP_001098647.1"; Name "WP_001098647.1"; Parent "gene-C7A06_RS01575"; gbkey "CDS"; gene "dtpB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417953.1"; locus_tag "C7A06_RS01575"; product "dipeptide/tripeptide permease DtpB"; protein_id "WP_001098647.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1515 NZ_CP027599.1 RefSeq gene 305997 306050 . + . gene_id "nbis-gene-5809"; ID "nbis-gene-5809"; Name "C7A06_RS34680"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS34680";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1516 NZ_CP027599.1 RefSeq transcript 305997 306050 . + . gene_id "nbis-gene-5809"; transcript_id "gene-C7A06_RS34680"; ID "gene-C7A06_RS34680"; Name "C7A06_RS34680"; Parent "nbis-gene-5809"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS34680"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1517 NZ_CP027599.1 Protein Homology exon 305997 306050 . + . gene_id "nbis-gene-5809"; transcript_id "gene-C7A06_RS34680"; Dbxref "Genbank:WP_212591402.1"; ID "nbis-exon-6118"; Name "WP_212591402.1"; Parent "gene-C7A06_RS34680"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_010051205.1"; locus_tag "C7A06_RS34680"; product "hypothetical protein"; protein_id "WP_212591402.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1518 NZ_CP027599.1 Protein Homology CDS 305997 306050 . + 0 gene_id "nbis-gene-5809"; transcript_id "gene-C7A06_RS34680"; Dbxref "Genbank:WP_212591402.1"; ID "cds-WP_212591402.1"; Name "WP_212591402.1"; Parent "gene-C7A06_RS34680"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_010051205.1"; locus_tag "C7A06_RS34680"; product "hypothetical protein"; protein_id "WP_212591402.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1519 NZ_CP027599.1 RefSeq gene 306149 306583 . - . gene_id "nbis-gene-261"; ID "nbis-gene-261"; Name "uspA"; gbkey "Gene"; gene "uspA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01585";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1520 NZ_CP027599.1 RefSeq transcript 306149 306583 . - . gene_id "nbis-gene-261"; transcript_id "gene-C7A06_RS01585"; ID "gene-C7A06_RS01585"; Name "uspA"; Parent "nbis-gene-261"; gbkey "Gene"; gene "uspA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01585"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1521 NZ_CP027599.1 Protein Homology exon 306149 306583 . - . gene_id "nbis-gene-261"; transcript_id "gene-C7A06_RS01585"; Dbxref "Genbank:WP_000323571.1"; ID "nbis-exon-270"; Name "WP_000323571.1"; Parent "gene-C7A06_RS01585"; gbkey "CDS"; gene "uspA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312394.1"; locus_tag "C7A06_RS01585"; product "universal stress protein UspA"; protein_id "WP_000323571.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1522 NZ_CP027599.1 Protein Homology CDS 306149 306583 . - 0 gene_id "nbis-gene-261"; transcript_id "gene-C7A06_RS01585"; Dbxref "Genbank:WP_000323571.1"; ID "cds-WP_000323571.1"; Name "WP_000323571.1"; Parent "gene-C7A06_RS01585"; gbkey "CDS"; gene "uspA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312394.1"; locus_tag "C7A06_RS01585"; product "universal stress protein UspA"; protein_id "WP_000323571.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1523 NZ_CP027599.1 RefSeq gene 306974 307309 . + . gene_id "nbis-gene-262"; ID "nbis-gene-262"; Name "uspB"; gbkey "Gene"; gene "uspB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01590";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1524 NZ_CP027599.1 RefSeq transcript 306974 307309 . + . gene_id "nbis-gene-262"; transcript_id "gene-C7A06_RS01590"; ID "gene-C7A06_RS01590"; Name "uspB"; Parent "nbis-gene-262"; gbkey "Gene"; gene "uspB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01590"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1525 NZ_CP027599.1 Protein Homology exon 306974 307309 . + . gene_id "nbis-gene-262"; transcript_id "gene-C7A06_RS01590"; Dbxref "Genbank:WP_000626187.1"; ID "nbis-exon-271"; Name "WP_000626187.1"; Parent "gene-C7A06_RS01590"; gbkey "CDS"; gene "uspB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312393.1"; locus_tag "C7A06_RS01590"; product "universal stress protein UspB"; protein_id "WP_000626187.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1526 NZ_CP027599.1 Protein Homology CDS 306974 307309 . + 0 gene_id "nbis-gene-262"; transcript_id "gene-C7A06_RS01590"; Dbxref "Genbank:WP_000626187.1"; ID "cds-WP_000626187.1"; Name "WP_000626187.1"; Parent "gene-C7A06_RS01590"; gbkey "CDS"; gene "uspB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312393.1"; locus_tag "C7A06_RS01590"; product "universal stress protein UspB"; protein_id "WP_000626187.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1527 NZ_CP027599.1 RefSeq gene 307554 309053 . - . gene_id "nbis-gene-263"; ID "nbis-gene-263"; Name "pitA"; gbkey "Gene"; gene "pitA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01595";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1528 NZ_CP027599.1 RefSeq transcript 307554 309053 . - . gene_id "nbis-gene-263"; transcript_id "gene-C7A06_RS01595"; ID "gene-C7A06_RS01595"; Name "pitA"; Parent "nbis-gene-263"; gbkey "Gene"; gene "pitA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01595"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1529 NZ_CP027599.1 Protein Homology exon 307554 309053 . - . gene_id "nbis-gene-263"; transcript_id "gene-C7A06_RS01595"; Dbxref "Genbank:WP_000902780.1"; ID "nbis-exon-272"; Name "WP_000902780.1"; Ontology_term "GO:0016020"; Parent "gene-C7A06_RS01595"; gbkey "CDS"; gene "pitA"; go_component "membrane|0016020||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312392.1"; locus_tag "C7A06_RS01595"; product "inorganic phosphate transporter PitA"; protein_id "WP_000902780.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1530 NZ_CP027599.1 Protein Homology CDS 307554 309053 . - 0 gene_id "nbis-gene-263"; transcript_id "gene-C7A06_RS01595"; Dbxref "Genbank:WP_000902780.1"; ID "cds-WP_000902780.1"; Name "WP_000902780.1"; Ontology_term "GO:0016020"; Parent "gene-C7A06_RS01595"; gbkey "CDS"; gene "pitA"; go_component "membrane|0016020||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312392.1"; locus_tag "C7A06_RS01595"; product "inorganic phosphate transporter PitA"; protein_id "WP_000902780.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1531 NZ_CP027599.1 RefSeq gene 309285 310487 . + . gene_id "nbis-gene-264"; ID "nbis-gene-264"; Name "yhiN"; gbkey "Gene"; gene "yhiN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01600";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1532 NZ_CP027599.1 RefSeq transcript 309285 310487 . + . gene_id "nbis-gene-264"; transcript_id "gene-C7A06_RS01600"; ID "gene-C7A06_RS01600"; Name "yhiN"; Parent "nbis-gene-264"; gbkey "Gene"; gene "yhiN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01600"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1533 NZ_CP027599.1 Protein Homology exon 309285 310487 . + . gene_id "nbis-gene-264"; transcript_id "gene-C7A06_RS01600"; Dbxref "Genbank:WP_000439180.1"; ID "nbis-exon-273"; Name "WP_000439180.1"; Parent "gene-C7A06_RS01600"; gbkey "CDS"; gene "yhiN"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417949.1"; locus_tag "C7A06_RS01600"; product "NAD(P)/FAD-dependent oxidoreductase"; protein_id "WP_000439180.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1534 NZ_CP027599.1 Protein Homology CDS 309285 310487 . + 0 gene_id "nbis-gene-264"; transcript_id "gene-C7A06_RS01600"; Dbxref "Genbank:WP_000439180.1"; ID "cds-WP_000439180.1"; Name "WP_000439180.1"; Parent "gene-C7A06_RS01600"; gbkey "CDS"; gene "yhiN"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417949.1"; locus_tag "C7A06_RS01600"; product "NAD(P)/FAD-dependent oxidoreductase"; protein_id "WP_000439180.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1535 NZ_CP027599.1 RefSeq gene 310803 311855 . - . gene_id "nbis-gene-265"; ID "nbis-gene-265"; Name "yhiM"; gbkey "Gene"; gene "yhiM"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01605";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1536 NZ_CP027599.1 RefSeq transcript 310803 311855 . - . gene_id "nbis-gene-265"; transcript_id "gene-C7A06_RS01605"; ID "gene-C7A06_RS01605"; Name "yhiM"; Parent "nbis-gene-265"; gbkey "Gene"; gene "yhiM"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01605"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1537 NZ_CP027599.1 Protein Homology exon 310803 311855 . - . gene_id "nbis-gene-265"; transcript_id "gene-C7A06_RS01605"; Dbxref "Genbank:WP_001028905.1"; ID "nbis-exon-274"; Name "WP_001028905.1"; Parent "gene-C7A06_RS01605"; gbkey "CDS"; gene "yhiM"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417948.4"; locus_tag "C7A06_RS01605"; product "DUF2776 domain-containing protein"; protein_id "WP_001028905.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1538 NZ_CP027599.1 Protein Homology CDS 310803 311855 . - 0 gene_id "nbis-gene-265"; transcript_id "gene-C7A06_RS01605"; Dbxref "Genbank:WP_001028905.1"; ID "cds-WP_001028905.1"; Name "WP_001028905.1"; Parent "gene-C7A06_RS01605"; gbkey "CDS"; gene "yhiM"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417948.4"; locus_tag "C7A06_RS01605"; product "DUF2776 domain-containing protein"; protein_id "WP_001028905.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1539 NZ_CP027599.1 RefSeq gene 312238 313845 . + . gene_id "nbis-gene-266"; ID "nbis-gene-266"; Name "C7A06_RS01615"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01615";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1540 NZ_CP027599.1 RefSeq transcript 312238 313845 . + . gene_id "nbis-gene-266"; transcript_id "gene-C7A06_RS01615"; ID "gene-C7A06_RS01615"; Name "C7A06_RS01615"; Parent "nbis-gene-266"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01615"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1541 NZ_CP027599.1 Protein Homology exon 312238 313845 . + . gene_id "nbis-gene-266"; transcript_id "gene-C7A06_RS01615"; Dbxref "Genbank:WP_000643698.1"; ID "nbis-exon-275"; Name "WP_000643698.1"; Parent "gene-C7A06_RS01615"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312389.1"; locus_tag "C7A06_RS01615"; product "DUF4049 domain-containing protein"; protein_id "WP_000643698.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1542 NZ_CP027599.1 Protein Homology CDS 312238 313845 . + 0 gene_id "nbis-gene-266"; transcript_id "gene-C7A06_RS01615"; Dbxref "Genbank:WP_000643698.1"; ID "cds-WP_000643698.1"; Name "WP_000643698.1"; Parent "gene-C7A06_RS01615"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312389.1"; locus_tag "C7A06_RS01615"; product "DUF4049 domain-containing protein"; protein_id "WP_000643698.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1543 NZ_CP027599.1 RefSeq gene 314107 315729 . + . gene_id "nbis-gene-267"; ID "nbis-gene-267"; Name "C7A06_RS01620"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01620";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1544 NZ_CP027599.1 RefSeq transcript 314107 315729 . + . gene_id "nbis-gene-267"; transcript_id "gene-C7A06_RS01620"; ID "gene-C7A06_RS01620"; Name "C7A06_RS01620"; Parent "nbis-gene-267"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01620"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1545 NZ_CP027599.1 Protein Homology exon 314107 315729 . + . gene_id "nbis-gene-267"; transcript_id "gene-C7A06_RS01620"; Dbxref "Genbank:WP_001341938.1"; ID "nbis-exon-276"; Name "WP_001341938.1"; Parent "gene-C7A06_RS01620"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709256.1"; locus_tag "C7A06_RS01620"; product "DUF4049 domain-containing protein"; protein_id "WP_001341938.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1546 NZ_CP027599.1 Protein Homology CDS 314107 315729 . + 0 gene_id "nbis-gene-267"; transcript_id "gene-C7A06_RS01620"; Dbxref "Genbank:WP_001341938.1"; ID "cds-WP_001341938.1"; Name "WP_001341938.1"; Parent "gene-C7A06_RS01620"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709256.1"; locus_tag "C7A06_RS01620"; product "DUF4049 domain-containing protein"; protein_id "WP_001341938.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1547 NZ_CP027599.1 RefSeq gene 315919 316032 . + . gene_id "nbis-gene-5810"; ID "nbis-gene-5810"; Name "yhiY"; gbkey "Gene"; gene "yhiY"; gene_biotype "protein_coding"; locus_tag "C7A06_RS34685";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1548 NZ_CP027599.1 RefSeq transcript 315919 316032 . + . gene_id "nbis-gene-5810"; transcript_id "gene-C7A06_RS34685"; ID "gene-C7A06_RS34685"; Name "yhiY"; Parent "nbis-gene-5810"; gbkey "Gene"; gene "yhiY"; gene_biotype "protein_coding"; locus_tag "C7A06_RS34685"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1549 NZ_CP027599.1 Protein Homology exon 315919 316032 . + . gene_id "nbis-gene-5810"; transcript_id "gene-C7A06_RS34685"; Dbxref "Genbank:WP_001296785.1"; ID "nbis-exon-6119"; Name "WP_001296785.1"; Parent "gene-C7A06_RS34685"; gbkey "CDS"; gene "yhiY"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_010051203.1"; locus_tag "C7A06_RS34685"; product "protein YhiY"; protein_id "WP_001296785.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1550 NZ_CP027599.1 Protein Homology CDS 315919 316032 . + 0 gene_id "nbis-gene-5810"; transcript_id "gene-C7A06_RS34685"; Dbxref "Genbank:WP_001296785.1"; ID "cds-WP_001296785.1"; Name "WP_001296785.1"; Parent "gene-C7A06_RS34685"; gbkey "CDS"; gene "yhiY"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_010051203.1"; locus_tag "C7A06_RS34685"; product "protein YhiY"; protein_id "WP_001296785.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1551 NZ_CP027599.1 RefSeq gene 316095 317162 . + . gene_id "nbis-gene-268"; ID "nbis-gene-268"; Name "yhiI"; gbkey "Gene"; gene "yhiI"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01625";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1552 NZ_CP027599.1 RefSeq transcript 316095 317162 . + . gene_id "nbis-gene-268"; transcript_id "gene-C7A06_RS01625"; ID "gene-C7A06_RS01625"; Name "yhiI"; Parent "nbis-gene-268"; gbkey "Gene"; gene "yhiI"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01625"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1553 NZ_CP027599.1 Protein Homology exon 316095 317162 . + . gene_id "nbis-gene-268"; transcript_id "gene-C7A06_RS01625"; Dbxref "Genbank:WP_000361464.1"; ID "nbis-exon-277"; Name "WP_000361464.1"; Parent "gene-C7A06_RS01625"; gbkey "CDS"; gene "yhiI"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709255.1"; locus_tag "C7A06_RS01625"; product "HlyD family secretion protein"; protein_id "WP_000361464.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1554 NZ_CP027599.1 Protein Homology CDS 316095 317162 . + 0 gene_id "nbis-gene-268"; transcript_id "gene-C7A06_RS01625"; Dbxref "Genbank:WP_000361464.1"; ID "cds-WP_000361464.1"; Name "WP_000361464.1"; Parent "gene-C7A06_RS01625"; gbkey "CDS"; gene "yhiI"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709255.1"; locus_tag "C7A06_RS01625"; product "HlyD family secretion protein"; protein_id "WP_000361464.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1555 NZ_CP027599.1 RefSeq gene 317159 319894 . + . gene_id "nbis-gene-269"; ID "nbis-gene-269"; Name "rbbA"; gbkey "Gene"; gene "rbbA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01630";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1556 NZ_CP027599.1 RefSeq transcript 317159 319894 . + . gene_id "nbis-gene-269"; transcript_id "gene-C7A06_RS01630"; ID "gene-C7A06_RS01630"; Name "rbbA"; Parent "nbis-gene-269"; gbkey "Gene"; gene "rbbA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01630"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1557 NZ_CP027599.1 Protein Homology exon 317159 319894 . + . gene_id "nbis-gene-269"; transcript_id "gene-C7A06_RS01630"; Dbxref "Genbank:WP_000149160.1"; ID "nbis-exon-278"; Name "WP_000149160.1"; Parent "gene-C7A06_RS01630"; gbkey "CDS"; gene "rbbA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709254.1"; locus_tag "C7A06_RS01630"; product "ribosome-associated ATPase/putative transporter RbbA"; protein_id "WP_000149160.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1558 NZ_CP027599.1 Protein Homology CDS 317159 319894 . + 0 gene_id "nbis-gene-269"; transcript_id "gene-C7A06_RS01630"; Dbxref "Genbank:WP_000149160.1"; ID "cds-WP_000149160.1"; Name "WP_000149160.1"; Parent "gene-C7A06_RS01630"; gbkey "CDS"; gene "rbbA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709254.1"; locus_tag "C7A06_RS01630"; product "ribosome-associated ATPase/putative transporter RbbA"; protein_id "WP_000149160.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1559 NZ_CP027599.1 RefSeq gene 319894 321018 . + . gene_id "nbis-gene-270"; ID "nbis-gene-270"; Name "yhhJ"; gbkey "Gene"; gene "yhhJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01635";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1560 NZ_CP027599.1 RefSeq transcript 319894 321018 . + . gene_id "nbis-gene-270"; transcript_id "gene-C7A06_RS01635"; ID "gene-C7A06_RS01635"; Name "yhhJ"; Parent "nbis-gene-270"; gbkey "Gene"; gene "yhhJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01635"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1561 NZ_CP027599.1 Protein Homology exon 319894 321018 . + . gene_id "nbis-gene-270"; transcript_id "gene-C7A06_RS01635"; Dbxref "Genbank:WP_001314210.1"; ID "nbis-exon-279"; Name "WP_001314210.1"; Parent "gene-C7A06_RS01635"; gbkey "CDS"; gene "yhhJ"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709253.2"; locus_tag "C7A06_RS01635"; product "ABC transporter permease"; protein_id "WP_001314210.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1562 NZ_CP027599.1 Protein Homology CDS 319894 321018 . + 0 gene_id "nbis-gene-270"; transcript_id "gene-C7A06_RS01635"; Dbxref "Genbank:WP_001314210.1"; ID "cds-WP_001314210.1"; Name "WP_001314210.1"; Parent "gene-C7A06_RS01635"; gbkey "CDS"; gene "yhhJ"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709253.2"; locus_tag "C7A06_RS01635"; product "ABC transporter permease"; protein_id "WP_001314210.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1563 NZ_CP027599.1 RefSeq gene 321183 322319 . - . gene_id "nbis-pseudogene-10"; ID "nbis-pseudogene-10"; Name "yhhI"; gbkey "Gene"; gene "yhhI"; gene_biotype "pseudogene"; locus_tag "C7A06_RS01640"; original_biotype "pseudogene"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1564 NZ_CP027599.1 RefSeq transcript 321183 322319 . - . gene_id "nbis-pseudogene-10"; transcript_id "gene-C7A06_RS01640"; ID "gene-C7A06_RS01640"; Name "yhhI"; Parent "nbis-pseudogene-10"; gbkey "Gene"; gene "yhhI"; gene_biotype "pseudogene"; locus_tag "C7A06_RS01640"; original_biotype "mrna"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1565 NZ_CP027599.1 Protein Homology exon 321183 322319 . - . gene_id "nbis-pseudogene-10"; transcript_id "gene-C7A06_RS01640"; ID "nbis-exon-280"; Note "internal stop"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS01640"; gbkey "CDS"; gene "yhhI"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1"; locus_tag "C7A06_RS01640"; product "ISAs1 family transposase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1566 NZ_CP027599.1 Protein Homology CDS 321183 322319 . - 0 gene_id "nbis-pseudogene-10"; transcript_id "gene-C7A06_RS01640"; ID "cds-C7A06_RS01640"; Note "internal stop"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS01640"; gbkey "CDS"; gene "yhhI"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1"; locus_tag "C7A06_RS01640"; product "ISAs1 family transposase"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1567 NZ_CP027599.1 RefSeq gene 322460 322810 . - . gene_id "nbis-pseudogene-11"; ID "nbis-pseudogene-11"; Name "C7A06_RS01645"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS01645"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "322460";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1568 NZ_CP027599.1 RefSeq transcript 322460 322810 . - . gene_id "nbis-pseudogene-11"; transcript_id "gene-C7A06_RS01645"; ID "gene-C7A06_RS01645"; Name "C7A06_RS01645"; Parent "nbis-pseudogene-11"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS01645"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "322460";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1569 NZ_CP027599.1 Protein Homology exon 322460 322810 . - . gene_id "nbis-pseudogene-11"; transcript_id "gene-C7A06_RS01645"; ID "nbis-exon-281"; Note "internal stop; incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS01645"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418051.1"; locus_tag "C7A06_RS01645"; partial "true"; product "lyase"; pseudo "true"; start_range "." "322460"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1570 NZ_CP027599.1 Protein Homology CDS 322460 322810 . - 0 gene_id "nbis-pseudogene-11"; transcript_id "gene-C7A06_RS01645"; ID "cds-C7A06_RS01645"; Note "internal stop; incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS01645"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_418051.1"; locus_tag "C7A06_RS01645"; partial "true"; product "lyase"; pseudo "true"; start_range "." "322460"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1571 NZ_CP027599.1 RefSeq gene 322915 323298 . - . gene_id "nbis-gene-271"; ID "nbis-gene-271"; Name "yhhH"; gbkey "Gene"; gene "yhhH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01650";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1572 NZ_CP027599.1 RefSeq transcript 322915 323298 . - . gene_id "nbis-gene-271"; transcript_id "gene-C7A06_RS01650"; ID "gene-C7A06_RS01650"; Name "yhhH"; Parent "nbis-gene-271"; gbkey "Gene"; gene "yhhH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01650"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1573 NZ_CP027599.1 Protein Homology exon 322915 323298 . - . gene_id "nbis-gene-271"; transcript_id "gene-C7A06_RS01650"; Dbxref "Genbank:WP_001271686.1"; ID "nbis-exon-282"; Name "WP_001271686.1"; Parent "gene-C7A06_RS01650"; gbkey "CDS"; gene "yhhH"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417940.2"; locus_tag "C7A06_RS01650"; product "YbbC/YhhH family protein"; protein_id "WP_001271686.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1574 NZ_CP027599.1 Protein Homology CDS 322915 323298 . - 0 gene_id "nbis-gene-271"; transcript_id "gene-C7A06_RS01650"; Dbxref "Genbank:WP_001271686.1"; ID "cds-WP_001271686.1"; Name "WP_001271686.1"; Parent "gene-C7A06_RS01650"; gbkey "CDS"; gene "yhhH"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417940.2"; locus_tag "C7A06_RS01650"; product "YbbC/YhhH family protein"; protein_id "WP_001271686.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1575 NZ_CP027599.1 RefSeq gene 323270 327505 . - . gene_id "nbis-gene-272"; ID "nbis-gene-272"; Name "rhsB"; gbkey "Gene"; gene "rhsB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01655";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1576 NZ_CP027599.1 RefSeq transcript 323270 327505 . - . gene_id "nbis-gene-272"; transcript_id "gene-C7A06_RS01655"; ID "gene-C7A06_RS01655"; Name "rhsB"; Parent "nbis-gene-272"; gbkey "Gene"; gene "rhsB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01655"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1577 NZ_CP027599.1 Protein Homology exon 323270 327505 . - . gene_id "nbis-gene-272"; transcript_id "gene-C7A06_RS01655"; Dbxref "Genbank:WP_069358362.1"; ID "nbis-exon-283"; Name "WP_069358362.1"; Parent "gene-C7A06_RS01655"; gbkey "CDS"; gene "rhsB"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026224.1"; locus_tag "C7A06_RS01655"; product "rhs element protein RhsB"; protein_id "WP_069358362.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1578 NZ_CP027599.1 Protein Homology CDS 323270 327505 . - 0 gene_id "nbis-gene-272"; transcript_id "gene-C7A06_RS01655"; Dbxref "Genbank:WP_069358362.1"; ID "cds-WP_069358362.1"; Name "WP_069358362.1"; Parent "gene-C7A06_RS01655"; gbkey "CDS"; gene "rhsB"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026224.1"; locus_tag "C7A06_RS01655"; product "rhs element protein RhsB"; protein_id "WP_069358362.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1579 NZ_CP027599.1 RefSeq gene 327708 328109 . - . gene_id "nbis-gene-273"; ID "nbis-gene-273"; Name "nikR"; gbkey "Gene"; gene "nikR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01660";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1580 NZ_CP027599.1 RefSeq transcript 327708 328109 . - . gene_id "nbis-gene-273"; transcript_id "gene-C7A06_RS01660"; ID "gene-C7A06_RS01660"; Name "nikR"; Parent "nbis-gene-273"; gbkey "Gene"; gene "nikR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01660"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1581 NZ_CP027599.1 Protein Homology exon 327708 328109 . - . gene_id "nbis-gene-273"; transcript_id "gene-C7A06_RS01660"; Dbxref "Genbank:WP_001190062.1"; ID "nbis-exon-284"; Name "WP_001190062.1"; Ontology_term "GO:0006355" "GO:0010045" "GO:0003677" "GO:0016151"; Parent "gene-C7A06_RS01660"; gbkey "CDS"; gene "nikR"; go_function "DNA binding|0003677||IEA" "nickel cation binding|0016151||IEA"; go_process "regulation of transcription, DNA-templated|0006355||IEA" "response to nickel cation|0010045||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312375.1"; locus_tag "C7A06_RS01660"; product "nickel-responsive transcriptional regulator NikR"; protein_id "WP_001190062.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1582 NZ_CP027599.1 Protein Homology CDS 327708 328109 . - 0 gene_id "nbis-gene-273"; transcript_id "gene-C7A06_RS01660"; Dbxref "Genbank:WP_001190062.1"; ID "cds-WP_001190062.1"; Name "WP_001190062.1"; Ontology_term "GO:0006355" "GO:0010045" "GO:0003677" "GO:0016151"; Parent "gene-C7A06_RS01660"; gbkey "CDS"; gene "nikR"; go_function "DNA binding|0003677||IEA" "nickel cation binding|0016151||IEA"; go_process "regulation of transcription, DNA-templated|0006355||IEA" "response to nickel cation|0010045||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312375.1"; locus_tag "C7A06_RS01660"; product "nickel-responsive transcriptional regulator NikR"; protein_id "WP_001190062.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1583 NZ_CP027599.1 RefSeq gene 328115 328921 . - . gene_id "nbis-gene-274"; ID "nbis-gene-274"; Name "nikE"; gbkey "Gene"; gene "nikE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01665";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1584 NZ_CP027599.1 RefSeq transcript 328115 328921 . - . gene_id "nbis-gene-274"; transcript_id "gene-C7A06_RS01665"; ID "gene-C7A06_RS01665"; Name "nikE"; Parent "nbis-gene-274"; gbkey "Gene"; gene "nikE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01665"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1585 NZ_CP027599.1 Protein Homology exon 328115 328921 . - . gene_id "nbis-gene-274"; transcript_id "gene-C7A06_RS01665"; Dbxref "Genbank:WP_000173630.1"; ID "nbis-exon-285"; Name "WP_000173630.1"; Ontology_term "GO:0015675" "GO:0005524" "GO:0015413" "GO:0009898" "GO:0043190"; Parent "gene-C7A06_RS01665"; gbkey "CDS"; gene "nikE"; go_component "cytoplasmic side of plasma membrane|0009898||IEA" "ATP-binding cassette (ABC) transporter complex|0043190||IEA"; go_function "ATP binding|0005524||IEA" "ABC-type nickel transporter activity|0015413||IEA"; go_process "nickel cation transport|0015675||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417937.1"; locus_tag "C7A06_RS01665"; product "nickel import ATP-binding protein NikE"; protein_id "WP_000173630.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1586 NZ_CP027599.1 Protein Homology CDS 328115 328921 . - 0 gene_id "nbis-gene-274"; transcript_id "gene-C7A06_RS01665"; Dbxref "Genbank:WP_000173630.1"; ID "cds-WP_000173630.1"; Name "WP_000173630.1"; Ontology_term "GO:0015675" "GO:0005524" "GO:0015413" "GO:0009898" "GO:0043190"; Parent "gene-C7A06_RS01665"; gbkey "CDS"; gene "nikE"; go_component "cytoplasmic side of plasma membrane|0009898||IEA" "ATP-binding cassette (ABC) transporter complex|0043190||IEA"; go_function "ATP binding|0005524||IEA" "ABC-type nickel transporter activity|0015413||IEA"; go_process "nickel cation transport|0015675||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417937.1"; locus_tag "C7A06_RS01665"; product "nickel import ATP-binding protein NikE"; protein_id "WP_000173630.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1587 NZ_CP027599.1 RefSeq gene 328918 329682 . - . gene_id "nbis-gene-275"; ID "nbis-gene-275"; Name "nikD"; gbkey "Gene"; gene "nikD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01670";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1588 NZ_CP027599.1 RefSeq transcript 328918 329682 . - . gene_id "nbis-gene-275"; transcript_id "gene-C7A06_RS01670"; ID "gene-C7A06_RS01670"; Name "nikD"; Parent "nbis-gene-275"; gbkey "Gene"; gene "nikD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01670"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1589 NZ_CP027599.1 Protein Homology exon 328918 329682 . - . gene_id "nbis-gene-275"; transcript_id "gene-C7A06_RS01670"; Dbxref "Genbank:WP_001136229.1"; ID "nbis-exon-286"; Name "WP_001136229.1"; Ontology_term "GO:0015675" "GO:0005524" "GO:0015413" "GO:0009898" "GO:0043190"; Parent "gene-C7A06_RS01670"; gbkey "CDS"; gene "nikD"; go_component "cytoplasmic side of plasma membrane|0009898||IEA" "ATP-binding cassette (ABC) transporter complex|0043190||IEA"; go_function "ATP binding|0005524||IEA" "ABC-type nickel transporter activity|0015413||IEA"; go_process "nickel cation transport|0015675||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417936.1"; locus_tag "C7A06_RS01670"; product "nickel import ATP-binding protein NikD"; protein_id "WP_001136229.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1590 NZ_CP027599.1 Protein Homology CDS 328918 329682 . - 0 gene_id "nbis-gene-275"; transcript_id "gene-C7A06_RS01670"; Dbxref "Genbank:WP_001136229.1"; ID "cds-WP_001136229.1"; Name "WP_001136229.1"; Ontology_term "GO:0015675" "GO:0005524" "GO:0015413" "GO:0009898" "GO:0043190"; Parent "gene-C7A06_RS01670"; gbkey "CDS"; gene "nikD"; go_component "cytoplasmic side of plasma membrane|0009898||IEA" "ATP-binding cassette (ABC) transporter complex|0043190||IEA"; go_function "ATP binding|0005524||IEA" "ABC-type nickel transporter activity|0015413||IEA"; go_process "nickel cation transport|0015675||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417936.1"; locus_tag "C7A06_RS01670"; product "nickel import ATP-binding protein NikD"; protein_id "WP_001136229.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1591 NZ_CP027599.1 RefSeq gene 329682 330515 . - . gene_id "nbis-gene-276"; ID "nbis-gene-276"; Name "nikC"; gbkey "Gene"; gene "nikC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01675";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1592 NZ_CP027599.1 RefSeq transcript 329682 330515 . - . gene_id "nbis-gene-276"; transcript_id "gene-C7A06_RS01675"; ID "gene-C7A06_RS01675"; Name "nikC"; Parent "nbis-gene-276"; gbkey "Gene"; gene "nikC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01675"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1593 NZ_CP027599.1 Protein Homology exon 329682 330515 . - . gene_id "nbis-gene-276"; transcript_id "gene-C7A06_RS01675"; Dbxref "Genbank:WP_001008968.1"; ID "nbis-exon-287"; Name "WP_001008968.1"; Ontology_term "GO:0055085" "GO:0015099" "GO:0016021"; Parent "gene-C7A06_RS01675"; gbkey "CDS"; gene "nikC"; go_component "integral component of membrane|0016021||IEA"; go_function "nickel cation transmembrane transporter activity|0015099||IEA"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312372.1"; locus_tag "C7A06_RS01675"; product "nickel ABC transporter permease subunit NikC"; protein_id "WP_001008968.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1594 NZ_CP027599.1 Protein Homology CDS 329682 330515 . - 0 gene_id "nbis-gene-276"; transcript_id "gene-C7A06_RS01675"; Dbxref "Genbank:WP_001008968.1"; ID "cds-WP_001008968.1"; Name "WP_001008968.1"; Ontology_term "GO:0055085" "GO:0015099" "GO:0016021"; Parent "gene-C7A06_RS01675"; gbkey "CDS"; gene "nikC"; go_component "integral component of membrane|0016021||IEA"; go_function "nickel cation transmembrane transporter activity|0015099||IEA"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312372.1"; locus_tag "C7A06_RS01675"; product "nickel ABC transporter permease subunit NikC"; protein_id "WP_001008968.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1595 NZ_CP027599.1 RefSeq gene 330512 331456 . - . gene_id "nbis-gene-277"; ID "nbis-gene-277"; Name "nikB"; gbkey "Gene"; gene "nikB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01680";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1596 NZ_CP027599.1 RefSeq transcript 330512 331456 . - . gene_id "nbis-gene-277"; transcript_id "gene-C7A06_RS01680"; ID "gene-C7A06_RS01680"; Name "nikB"; Parent "nbis-gene-277"; gbkey "Gene"; gene "nikB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01680"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1597 NZ_CP027599.1 Protein Homology exon 330512 331456 . - . gene_id "nbis-gene-277"; transcript_id "gene-C7A06_RS01680"; Dbxref "Genbank:WP_000947068.1"; ID "nbis-exon-288"; Name "WP_000947068.1"; Parent "gene-C7A06_RS01680"; gbkey "CDS"; gene "nikB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417934.1"; locus_tag "C7A06_RS01680"; product "nickel ABC transporter permease subunit NikB"; protein_id "WP_000947068.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1598 NZ_CP027599.1 Protein Homology CDS 330512 331456 . - 0 gene_id "nbis-gene-277"; transcript_id "gene-C7A06_RS01680"; Dbxref "Genbank:WP_000947068.1"; ID "cds-WP_000947068.1"; Name "WP_000947068.1"; Parent "gene-C7A06_RS01680"; gbkey "CDS"; gene "nikB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417934.1"; locus_tag "C7A06_RS01680"; product "nickel ABC transporter permease subunit NikB"; protein_id "WP_000947068.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1599 NZ_CP027599.1 RefSeq gene 331456 333030 . - . gene_id "nbis-gene-278"; ID "nbis-gene-278"; Name "nikA"; gbkey "Gene"; gene "nikA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01685";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1600 NZ_CP027599.1 RefSeq transcript 331456 333030 . - . gene_id "nbis-gene-278"; transcript_id "gene-C7A06_RS01685"; ID "gene-C7A06_RS01685"; Name "nikA"; Parent "nbis-gene-278"; gbkey "Gene"; gene "nikA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01685"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1601 NZ_CP027599.1 Protein Homology exon 331456 333030 . - . gene_id "nbis-gene-278"; transcript_id "gene-C7A06_RS01685"; Dbxref "Genbank:WP_000953353.1"; ID "nbis-exon-289"; Name "WP_000953353.1"; Ontology_term "GO:0015675" "GO:0015413" "GO:0016151" "GO:0030288" "GO:0031362" "GO:0055052"; Parent "gene-C7A06_RS01685"; gbkey "CDS"; gene "nikA"; go_component "outer membrane-bounded periplasmic space|0030288||IEA" "anchored component of external side of plasma membrane|0031362||IEA" "ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing|0055052||IEA"; go_function "ABC-type nickel transporter activity|0015413||IEA" "nickel cation binding|0016151||IEA"; go_process "nickel cation transport|0015675||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417933.1"; locus_tag "C7A06_RS01685"; product "nickel ABC transporter substrate-binding protein"; protein_id "WP_000953353.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1602 NZ_CP027599.1 Protein Homology CDS 331456 333030 . - 0 gene_id "nbis-gene-278"; transcript_id "gene-C7A06_RS01685"; Dbxref "Genbank:WP_000953353.1"; ID "cds-WP_000953353.1"; Name "WP_000953353.1"; Ontology_term "GO:0015675" "GO:0015413" "GO:0016151" "GO:0030288" "GO:0031362" "GO:0055052"; Parent "gene-C7A06_RS01685"; gbkey "CDS"; gene "nikA"; go_component "outer membrane-bounded periplasmic space|0030288||IEA" "anchored component of external side of plasma membrane|0031362||IEA" "ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing|0055052||IEA"; go_function "ABC-type nickel transporter activity|0015413||IEA" "nickel cation binding|0016151||IEA"; go_process "nickel cation transport|0015675||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417933.1"; locus_tag "C7A06_RS01685"; product "nickel ABC transporter substrate-binding protein"; protein_id "WP_000953353.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1603 NZ_CP027599.1 RefSeq gene 333141 333728 . - . gene_id "nbis-gene-279"; ID "nbis-gene-279"; Name "acpT"; gbkey "Gene"; gene "acpT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01690";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1604 NZ_CP027599.1 RefSeq transcript 333141 333728 . - . gene_id "nbis-gene-279"; transcript_id "gene-C7A06_RS01690"; ID "gene-C7A06_RS01690"; Name "acpT"; Parent "nbis-gene-279"; gbkey "Gene"; gene "acpT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01690"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1605 NZ_CP027599.1 Protein Homology exon 333141 333728 . - . gene_id "nbis-gene-279"; transcript_id "gene-C7A06_RS01690"; Dbxref "Genbank:WP_000285771.1"; ID "nbis-exon-290"; Name "WP_000285771.1"; Parent "gene-C7A06_RS01690"; gbkey "CDS"; gene "acpT"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417932.1"; locus_tag "C7A06_RS01690"; product "4'-phosphopantetheinyl transferase AcpT"; protein_id "WP_000285771.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1606 NZ_CP027599.1 Protein Homology CDS 333141 333728 . - 0 gene_id "nbis-gene-279"; transcript_id "gene-C7A06_RS01690"; Dbxref "Genbank:WP_000285771.1"; ID "cds-WP_000285771.1"; Name "WP_000285771.1"; Parent "gene-C7A06_RS01690"; gbkey "CDS"; gene "acpT"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417932.1"; locus_tag "C7A06_RS01690"; product "4'-phosphopantetheinyl transferase AcpT"; protein_id "WP_000285771.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1607 NZ_CP027599.1 RefSeq gene 333783 334832 . - . gene_id "nbis-gene-280"; ID "nbis-gene-280"; Name "yhhT"; gbkey "Gene"; gene "yhhT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01695";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1608 NZ_CP027599.1 RefSeq transcript 333783 334832 . - . gene_id "nbis-gene-280"; transcript_id "gene-C7A06_RS01695"; ID "gene-C7A06_RS01695"; Name "yhhT"; Parent "nbis-gene-280"; gbkey "Gene"; gene "yhhT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01695"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1609 NZ_CP027599.1 Protein Homology exon 333783 334832 . - . gene_id "nbis-gene-280"; transcript_id "gene-C7A06_RS01695"; Dbxref "Genbank:WP_001295209.1"; ID "nbis-exon-291"; Name "WP_001295209.1"; Parent "gene-C7A06_RS01695"; gbkey "CDS"; gene "yhhT"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312350.2"; locus_tag "C7A06_RS01695"; product "AI-2E family transporter"; protein_id "WP_001295209.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1610 NZ_CP027599.1 Protein Homology CDS 333783 334832 . - 0 gene_id "nbis-gene-280"; transcript_id "gene-C7A06_RS01695"; Dbxref "Genbank:WP_001295209.1"; ID "cds-WP_001295209.1"; Name "WP_001295209.1"; Parent "gene-C7A06_RS01695"; gbkey "CDS"; gene "yhhT"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312350.2"; locus_tag "C7A06_RS01695"; product "AI-2E family transporter"; protein_id "WP_001295209.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1611 NZ_CP027599.1 RefSeq gene 334964 336181 . + . gene_id "nbis-gene-281"; ID "nbis-gene-281"; Name "yhhS"; gbkey "Gene"; gene "yhhS"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01700";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1612 NZ_CP027599.1 RefSeq transcript 334964 336181 . + . gene_id "nbis-gene-281"; transcript_id "gene-C7A06_RS01700"; ID "gene-C7A06_RS01700"; Name "yhhS"; Parent "nbis-gene-281"; gbkey "Gene"; gene "yhhS"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01700"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1613 NZ_CP027599.1 Protein Homology exon 334964 336181 . + . gene_id "nbis-gene-281"; transcript_id "gene-C7A06_RS01700"; Dbxref "Genbank:WP_001341936.1"; ID "nbis-exon-292"; Name "WP_001341936.1"; Parent "gene-C7A06_RS01700"; gbkey "CDS"; gene "yhhS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417930.2"; locus_tag "C7A06_RS01700"; product "MFS transporter"; protein_id "WP_001341936.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1614 NZ_CP027599.1 Protein Homology CDS 334964 336181 . + 0 gene_id "nbis-gene-281"; transcript_id "gene-C7A06_RS01700"; Dbxref "Genbank:WP_001341936.1"; ID "cds-WP_001341936.1"; Name "WP_001341936.1"; Parent "gene-C7A06_RS01700"; gbkey "CDS"; gene "yhhS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417930.2"; locus_tag "C7A06_RS01700"; product "MFS transporter"; protein_id "WP_001341936.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1615 NZ_CP027599.1 RefSeq gene 336185 336742 . - . gene_id "nbis-gene-282"; ID "nbis-gene-282"; Name "dcrB"; gbkey "Gene"; gene "dcrB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01705";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1616 NZ_CP027599.1 RefSeq transcript 336185 336742 . - . gene_id "nbis-gene-282"; transcript_id "gene-C7A06_RS01705"; ID "gene-C7A06_RS01705"; Name "dcrB"; Parent "nbis-gene-282"; gbkey "Gene"; gene "dcrB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01705"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1617 NZ_CP027599.1 Protein Homology exon 336185 336742 . - . gene_id "nbis-gene-282"; transcript_id "gene-C7A06_RS01705"; Dbxref "Genbank:WP_001245295.1"; ID "nbis-exon-293"; Name "WP_001245295.1"; Parent "gene-C7A06_RS01705"; gbkey "CDS"; gene "dcrB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417929.4"; locus_tag "C7A06_RS01705"; product "phage sensitivity protein DcrB"; protein_id "WP_001245295.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1618 NZ_CP027599.1 Protein Homology CDS 336185 336742 . - 0 gene_id "nbis-gene-282"; transcript_id "gene-C7A06_RS01705"; Dbxref "Genbank:WP_001245295.1"; ID "cds-WP_001245295.1"; Name "WP_001245295.1"; Parent "gene-C7A06_RS01705"; gbkey "CDS"; gene "dcrB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417929.4"; locus_tag "C7A06_RS01705"; product "phage sensitivity protein DcrB"; protein_id "WP_001245295.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1619 NZ_CP027599.1 RefSeq gene 336815 337480 . - . gene_id "nbis-gene-283"; ID "nbis-gene-283"; Name "yhhQ"; gbkey "Gene"; gene "yhhQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01710";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1620 NZ_CP027599.1 RefSeq transcript 336815 337480 . - . gene_id "nbis-gene-283"; transcript_id "gene-C7A06_RS01710"; ID "gene-C7A06_RS01710"; Name "yhhQ"; Parent "nbis-gene-283"; gbkey "Gene"; gene "yhhQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01710"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1621 NZ_CP027599.1 Protein Homology exon 336815 337480 . - . gene_id "nbis-gene-283"; transcript_id "gene-C7A06_RS01710"; Dbxref "Genbank:WP_001100467.1"; ID "nbis-exon-294"; Name "WP_001100467.1"; Ontology_term "GO:1990397"; Parent "gene-C7A06_RS01710"; gbkey "CDS"; gene "yhhQ"; go_process "queuosine salvage|1990397||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312347.1"; locus_tag "C7A06_RS01710"; product "7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter"; protein_id "WP_001100467.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1622 NZ_CP027599.1 Protein Homology CDS 336815 337480 . - 0 gene_id "nbis-gene-283"; transcript_id "gene-C7A06_RS01710"; Dbxref "Genbank:WP_001100467.1"; ID "cds-WP_001100467.1"; Name "WP_001100467.1"; Ontology_term "GO:1990397"; Parent "gene-C7A06_RS01710"; gbkey "CDS"; gene "yhhQ"; go_process "queuosine salvage|1990397||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312347.1"; locus_tag "C7A06_RS01710"; product "7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter"; protein_id "WP_001100467.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1623 NZ_CP027599.1 RefSeq gene 337701 337946 . + . gene_id "nbis-gene-284"; ID "nbis-gene-284"; Name "tusA"; gbkey "Gene"; gene "tusA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01715";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1624 NZ_CP027599.1 RefSeq transcript 337701 337946 . + . gene_id "nbis-gene-284"; transcript_id "gene-C7A06_RS01715"; ID "gene-C7A06_RS01715"; Name "tusA"; Parent "nbis-gene-284"; gbkey "Gene"; gene "tusA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01715"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1625 NZ_CP027599.1 Protein Homology exon 337701 337946 . + . gene_id "nbis-gene-284"; transcript_id "gene-C7A06_RS01715"; Dbxref "Genbank:WP_000130621.1"; ID "nbis-exon-295"; Name "WP_000130621.1"; Ontology_term "GO:0002143" "GO:0097163"; Parent "gene-C7A06_RS01715"; gbkey "CDS"; gene "tusA"; go_function "sulfur carrier activity|0097163||IEA"; go_process "tRNA wobble position uridine thiolation|0002143||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312346.1"; locus_tag "C7A06_RS01715"; product "sulfurtransferase TusA"; protein_id "WP_000130621.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1626 NZ_CP027599.1 Protein Homology CDS 337701 337946 . + 0 gene_id "nbis-gene-284"; transcript_id "gene-C7A06_RS01715"; Dbxref "Genbank:WP_000130621.1"; ID "cds-WP_000130621.1"; Name "WP_000130621.1"; Ontology_term "GO:0002143" "GO:0097163"; Parent "gene-C7A06_RS01715"; gbkey "CDS"; gene "tusA"; go_function "sulfur carrier activity|0097163||IEA"; go_process "tRNA wobble position uridine thiolation|0002143||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312346.1"; locus_tag "C7A06_RS01715"; product "sulfurtransferase TusA"; protein_id "WP_000130621.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1627 NZ_CP027599.1 RefSeq gene 338048 340246 . - . gene_id "nbis-gene-285"; ID "nbis-gene-285"; Name "zntA"; gbkey "Gene"; gene "zntA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01720";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1628 NZ_CP027599.1 RefSeq transcript 338048 340246 . - . gene_id "nbis-gene-285"; transcript_id "gene-C7A06_RS01720"; ID "gene-C7A06_RS01720"; Name "zntA"; Parent "nbis-gene-285"; gbkey "Gene"; gene "zntA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01720"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1629 NZ_CP027599.1 Protein Homology exon 338048 340246 . - . gene_id "nbis-gene-285"; transcript_id "gene-C7A06_RS01720"; Dbxref "Genbank:WP_000106580.1"; ID "nbis-exon-296"; Name "WP_000106580.1"; Ontology_term "GO:0006812" "GO:0005215" "GO:0005524" "GO:0016887" "GO:0019829" "GO:0046872" "GO:0016021"; Parent "gene-C7A06_RS01720"; gbkey "CDS"; gene "zntA"; go_component "integral component of membrane|0016021||IEA"; go_function "transporter activity|0005215||IEA" "ATP binding|0005524||IEA" "ATP hydrolysis activity|0016887||IEA" "ATPase-coupled cation transmembrane transporter activity|0019829||IEA" "metal ion binding|0046872||IEA"; go_process "cation transport|0006812||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709239.1"; locus_tag "C7A06_RS01720"; product "Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA"; protein_id "WP_000106580.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1630 NZ_CP027599.1 Protein Homology CDS 338048 340246 . - 0 gene_id "nbis-gene-285"; transcript_id "gene-C7A06_RS01720"; Dbxref "Genbank:WP_000106580.1"; ID "cds-WP_000106580.1"; Name "WP_000106580.1"; Ontology_term "GO:0006812" "GO:0005215" "GO:0005524" "GO:0016887" "GO:0019829" "GO:0046872" "GO:0016021"; Parent "gene-C7A06_RS01720"; gbkey "CDS"; gene "zntA"; go_component "integral component of membrane|0016021||IEA"; go_function "transporter activity|0005215||IEA" "ATP binding|0005524||IEA" "ATP hydrolysis activity|0016887||IEA" "ATPase-coupled cation transmembrane transporter activity|0019829||IEA" "metal ion binding|0046872||IEA"; go_process "cation transport|0006812||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709239.1"; locus_tag "C7A06_RS01720"; product "Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA"; protein_id "WP_000106580.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1631 NZ_CP027599.1 RefSeq gene 340320 340946 . - . gene_id "nbis-gene-286"; ID "nbis-gene-286"; Name "yhhN"; gbkey "Gene"; gene "yhhN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01725";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1632 NZ_CP027599.1 RefSeq transcript 340320 340946 . - . gene_id "nbis-gene-286"; transcript_id "gene-C7A06_RS01725"; ID "gene-C7A06_RS01725"; Name "yhhN"; Parent "nbis-gene-286"; gbkey "Gene"; gene "yhhN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01725"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1633 NZ_CP027599.1 Protein Homology exon 340320 340946 . - . gene_id "nbis-gene-286"; transcript_id "gene-C7A06_RS01725"; Dbxref "Genbank:WP_000964718.1"; ID "nbis-exon-297"; Name "WP_000964718.1"; Parent "gene-C7A06_RS01725"; gbkey "CDS"; gene "yhhN"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312344.1"; locus_tag "C7A06_RS01725"; product "lysoplasmalogenase"; protein_id "WP_000964718.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1634 NZ_CP027599.1 Protein Homology CDS 340320 340946 . - 0 gene_id "nbis-gene-286"; transcript_id "gene-C7A06_RS01725"; Dbxref "Genbank:WP_000964718.1"; ID "cds-WP_000964718.1"; Name "WP_000964718.1"; Parent "gene-C7A06_RS01725"; gbkey "CDS"; gene "yhhN"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312344.1"; locus_tag "C7A06_RS01725"; product "lysoplasmalogenase"; protein_id "WP_000964718.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1635 NZ_CP027599.1 RefSeq gene 341087 341446 . + . gene_id "nbis-gene-287"; ID "nbis-gene-287"; Name "yhhM"; gbkey "Gene"; gene "yhhM"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01730";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1636 NZ_CP027599.1 RefSeq transcript 341087 341446 . + . gene_id "nbis-gene-287"; transcript_id "gene-C7A06_RS01730"; ID "gene-C7A06_RS01730"; Name "yhhM"; Parent "nbis-gene-287"; gbkey "Gene"; gene "yhhM"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01730"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1637 NZ_CP027599.1 Protein Homology exon 341087 341446 . + . gene_id "nbis-gene-287"; transcript_id "gene-C7A06_RS01730"; Dbxref "Genbank:WP_000042873.1"; ID "nbis-exon-298"; Name "WP_000042873.1"; Parent "gene-C7A06_RS01730"; gbkey "CDS"; gene "yhhM"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312343.1"; locus_tag "C7A06_RS01730"; product "DUF2500 domain-containing protein"; protein_id "WP_000042873.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1638 NZ_CP027599.1 Protein Homology CDS 341087 341446 . + 0 gene_id "nbis-gene-287"; transcript_id "gene-C7A06_RS01730"; Dbxref "Genbank:WP_000042873.1"; ID "cds-WP_000042873.1"; Name "WP_000042873.1"; Parent "gene-C7A06_RS01730"; gbkey "CDS"; gene "yhhM"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312343.1"; locus_tag "C7A06_RS01730"; product "DUF2500 domain-containing protein"; protein_id "WP_000042873.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1639 NZ_CP027599.1 RefSeq gene 341449 341718 . - . gene_id "nbis-gene-288"; ID "nbis-gene-288"; Name "yhhL"; gbkey "Gene"; gene "yhhL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01735";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1640 NZ_CP027599.1 RefSeq transcript 341449 341718 . - . gene_id "nbis-gene-288"; transcript_id "gene-C7A06_RS01735"; ID "gene-C7A06_RS01735"; Name "yhhL"; Parent "nbis-gene-288"; gbkey "Gene"; gene "yhhL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01735"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1641 NZ_CP027599.1 Protein Homology exon 341449 341718 . - . gene_id "nbis-gene-288"; transcript_id "gene-C7A06_RS01735"; Dbxref "Genbank:WP_001295207.1"; ID "nbis-exon-299"; Name "WP_001295207.1"; Parent "gene-C7A06_RS01735"; gbkey "CDS"; gene "yhhL"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312342.1"; locus_tag "C7A06_RS01735"; product "DUF1145 family protein"; protein_id "WP_001295207.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1642 NZ_CP027599.1 Protein Homology CDS 341449 341718 . - 0 gene_id "nbis-gene-288"; transcript_id "gene-C7A06_RS01735"; Dbxref "Genbank:WP_001295207.1"; ID "cds-WP_001295207.1"; Name "WP_001295207.1"; Parent "gene-C7A06_RS01735"; gbkey "CDS"; gene "yhhL"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312342.1"; locus_tag "C7A06_RS01735"; product "DUF1145 family protein"; protein_id "WP_001295207.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1643 NZ_CP027599.1 RefSeq gene 341708 342304 . - . gene_id "nbis-gene-289"; ID "nbis-gene-289"; Name "rsmD"; gbkey "Gene"; gene "rsmD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01740";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1644 NZ_CP027599.1 RefSeq transcript 341708 342304 . - . gene_id "nbis-gene-289"; transcript_id "gene-C7A06_RS01740"; ID "gene-C7A06_RS01740"; Name "rsmD"; Parent "nbis-gene-289"; gbkey "Gene"; gene "rsmD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01740"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1645 NZ_CP027599.1 Protein Homology exon 341708 342304 . - . gene_id "nbis-gene-289"; transcript_id "gene-C7A06_RS01740"; Dbxref "Genbank:WP_000743193.1"; ID "nbis-exon-300"; Name "WP_000743193.1"; Ontology_term "GO:0031167" "GO:0003676" "GO:0008168"; Parent "gene-C7A06_RS01740"; gbkey "CDS"; gene "rsmD"; go_function "nucleic acid binding|0003676||IEA" "methyltransferase activity|0008168||IEA"; go_process "rRNA methylation|0031167||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417922.1"; locus_tag "C7A06_RS01740"; product "16S rRNA (guanine(966)-N(2))-methyltransferase"; protein_id "WP_000743193.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1646 NZ_CP027599.1 Protein Homology CDS 341708 342304 . - 0 gene_id "nbis-gene-289"; transcript_id "gene-C7A06_RS01740"; Dbxref "Genbank:WP_000743193.1"; ID "cds-WP_000743193.1"; Name "WP_000743193.1"; Ontology_term "GO:0031167" "GO:0003676" "GO:0008168"; Parent "gene-C7A06_RS01740"; gbkey "CDS"; gene "rsmD"; go_function "nucleic acid binding|0003676||IEA" "methyltransferase activity|0008168||IEA"; go_process "rRNA methylation|0031167||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417922.1"; locus_tag "C7A06_RS01740"; product "16S rRNA (guanine(966)-N(2))-methyltransferase"; protein_id "WP_000743193.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1647 NZ_CP027599.1 RefSeq gene 342454 343950 . + . gene_id "nbis-gene-290"; ID "nbis-gene-290"; Name "ftsY"; gbkey "Gene"; gene "ftsY"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01745";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1648 NZ_CP027599.1 RefSeq transcript 342454 343950 . + . gene_id "nbis-gene-290"; transcript_id "gene-C7A06_RS01745"; ID "gene-C7A06_RS01745"; Name "ftsY"; Parent "nbis-gene-290"; gbkey "Gene"; gene "ftsY"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01745"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1649 NZ_CP027599.1 Protein Homology exon 342454 343950 . + . gene_id "nbis-gene-290"; transcript_id "gene-C7A06_RS01745"; Dbxref "Genbank:WP_001040651.1"; ID "nbis-exon-301"; Name "WP_001040651.1"; Ontology_term "GO:0009306" "GO:0003924" "GO:0005047"; Parent "gene-C7A06_RS01745"; gbkey "CDS"; gene "ftsY"; go_function "GTPase activity|0003924||IEA" "signal recognition particle binding|0005047||IEA"; go_process "protein secretion|0009306||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312340.1"; locus_tag "C7A06_RS01745"; product "signal recognition particle-docking protein FtsY"; protein_id "WP_001040651.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1650 NZ_CP027599.1 Protein Homology CDS 342454 343950 . + 0 gene_id "nbis-gene-290"; transcript_id "gene-C7A06_RS01745"; Dbxref "Genbank:WP_001040651.1"; ID "cds-WP_001040651.1"; Name "WP_001040651.1"; Ontology_term "GO:0009306" "GO:0003924" "GO:0005047"; Parent "gene-C7A06_RS01745"; gbkey "CDS"; gene "ftsY"; go_function "GTPase activity|0003924||IEA" "signal recognition particle binding|0005047||IEA"; go_process "protein secretion|0009306||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312340.1"; locus_tag "C7A06_RS01745"; product "signal recognition particle-docking protein FtsY"; protein_id "WP_001040651.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1651 NZ_CP027599.1 RefSeq gene 343953 344621 . + . gene_id "nbis-gene-291"; ID "nbis-gene-291"; Name "ftsE"; gbkey "Gene"; gene "ftsE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01750";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1652 NZ_CP027599.1 RefSeq transcript 343953 344621 . + . gene_id "nbis-gene-291"; transcript_id "gene-C7A06_RS01750"; ID "gene-C7A06_RS01750"; Name "ftsE"; Parent "nbis-gene-291"; gbkey "Gene"; gene "ftsE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01750"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1653 NZ_CP027599.1 Protein Homology exon 343953 344621 . + . gene_id "nbis-gene-291"; transcript_id "gene-C7A06_RS01750"; Dbxref "Genbank:WP_000617723.1"; ID "nbis-exon-302"; Name "WP_000617723.1"; Parent "gene-C7A06_RS01750"; gbkey "CDS"; gene "ftsE"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312339.1"; locus_tag "C7A06_RS01750"; product "cell division ATP-binding protein FtsE"; protein_id "WP_000617723.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1654 NZ_CP027599.1 Protein Homology CDS 343953 344621 . + 0 gene_id "nbis-gene-291"; transcript_id "gene-C7A06_RS01750"; Dbxref "Genbank:WP_000617723.1"; ID "cds-WP_000617723.1"; Name "WP_000617723.1"; Parent "gene-C7A06_RS01750"; gbkey "CDS"; gene "ftsE"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312339.1"; locus_tag "C7A06_RS01750"; product "cell division ATP-binding protein FtsE"; protein_id "WP_000617723.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1655 NZ_CP027599.1 RefSeq gene 344614 345672 . + . gene_id "nbis-gene-292"; ID "nbis-gene-292"; Name "ftsX"; gbkey "Gene"; gene "ftsX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01755";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1656 NZ_CP027599.1 RefSeq transcript 344614 345672 . + . gene_id "nbis-gene-292"; transcript_id "gene-C7A06_RS01755"; ID "gene-C7A06_RS01755"; Name "ftsX"; Parent "nbis-gene-292"; gbkey "Gene"; gene "ftsX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01755"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1657 NZ_CP027599.1 Protein Homology exon 344614 345672 . + . gene_id "nbis-gene-292"; transcript_id "gene-C7A06_RS01755"; Dbxref "Genbank:WP_001042001.1"; ID "nbis-exon-303"; Name "WP_001042001.1"; Ontology_term "GO:0000910"; Parent "gene-C7A06_RS01755"; gbkey "CDS"; gene "ftsX"; go_process "cytokinesis|0000910||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417919.1"; locus_tag "C7A06_RS01755"; product "permease-like cell division protein FtsX"; protein_id "WP_001042001.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1658 NZ_CP027599.1 Protein Homology CDS 344614 345672 . + 0 gene_id "nbis-gene-292"; transcript_id "gene-C7A06_RS01755"; Dbxref "Genbank:WP_001042001.1"; ID "cds-WP_001042001.1"; Name "WP_001042001.1"; Ontology_term "GO:0000910"; Parent "gene-C7A06_RS01755"; gbkey "CDS"; gene "ftsX"; go_process "cytokinesis|0000910||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417919.1"; locus_tag "C7A06_RS01755"; product "permease-like cell division protein FtsX"; protein_id "WP_001042001.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1659 NZ_CP027599.1 RefSeq gene 345917 346771 . + . gene_id "nbis-gene-293"; ID "nbis-gene-293"; Name "rpoH"; gbkey "Gene"; gene "rpoH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01760";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1660 NZ_CP027599.1 RefSeq transcript 345917 346771 . + . gene_id "nbis-gene-293"; transcript_id "gene-C7A06_RS01760"; ID "gene-C7A06_RS01760"; Name "rpoH"; Parent "nbis-gene-293"; gbkey "Gene"; gene "rpoH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01760"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1661 NZ_CP027599.1 Protein Homology exon 345917 346771 . + . gene_id "nbis-gene-293"; transcript_id "gene-C7A06_RS01760"; Dbxref "Genbank:WP_000130217.1"; ID "nbis-exon-304"; Name "WP_000130217.1"; Ontology_term "GO:0006352" "GO:0016987"; Parent "gene-C7A06_RS01760"; gbkey "CDS"; gene "rpoH"; go_function "sigma factor activity|0016987||IEA"; go_process "DNA-templated transcription, initiation|0006352||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312337.1"; locus_tag "C7A06_RS01760"; product "RNA polymerase sigma factor RpoH"; protein_id "WP_000130217.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1662 NZ_CP027599.1 Protein Homology CDS 345917 346771 . + 0 gene_id "nbis-gene-293"; transcript_id "gene-C7A06_RS01760"; Dbxref "Genbank:WP_000130217.1"; ID "cds-WP_000130217.1"; Name "WP_000130217.1"; Ontology_term "GO:0006352" "GO:0016987"; Parent "gene-C7A06_RS01760"; gbkey "CDS"; gene "rpoH"; go_function "sigma factor activity|0016987||IEA"; go_process "DNA-templated transcription, initiation|0006352||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312337.1"; locus_tag "C7A06_RS01760"; product "RNA polymerase sigma factor RpoH"; protein_id "WP_000130217.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1663 NZ_CP027599.1 RefSeq gene 347042 348145 . + . gene_id "nbis-gene-294"; ID "nbis-gene-294"; Name "livJ"; gbkey "Gene"; gene "livJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01765";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1664 NZ_CP027599.1 RefSeq transcript 347042 348145 . + . gene_id "nbis-gene-294"; transcript_id "gene-C7A06_RS01765"; ID "gene-C7A06_RS01765"; Name "livJ"; Parent "nbis-gene-294"; gbkey "Gene"; gene "livJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01765"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1665 NZ_CP027599.1 Protein Homology exon 347042 348145 . + . gene_id "nbis-gene-294"; transcript_id "gene-C7A06_RS01765"; Dbxref "Genbank:WP_001021996.1"; ID "nbis-exon-305"; Name "WP_001021996.1"; Parent "gene-C7A06_RS01765"; gbkey "CDS"; gene "livJ"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026223.1"; locus_tag "C7A06_RS01765"; product "branched chain amino acid ABC transporter substrate-binding protein LivJ"; protein_id "WP_001021996.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1666 NZ_CP027599.1 Protein Homology CDS 347042 348145 . + 0 gene_id "nbis-gene-294"; transcript_id "gene-C7A06_RS01765"; Dbxref "Genbank:WP_001021996.1"; ID "cds-WP_001021996.1"; Name "WP_001021996.1"; Parent "gene-C7A06_RS01765"; gbkey "CDS"; gene "livJ"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026223.1"; locus_tag "C7A06_RS01765"; product "branched chain amino acid ABC transporter substrate-binding protein LivJ"; protein_id "WP_001021996.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1667 NZ_CP027599.1 RefSeq gene 348344 348727 . - . gene_id "nbis-gene-295"; ID "nbis-gene-295"; Name "panM"; gbkey "Gene"; gene "panM"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01770";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1668 NZ_CP027599.1 RefSeq transcript 348344 348727 . - . gene_id "nbis-gene-295"; transcript_id "gene-C7A06_RS01770"; ID "gene-C7A06_RS01770"; Name "panM"; Parent "nbis-gene-295"; gbkey "Gene"; gene "panM"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01770"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1669 NZ_CP027599.1 Protein Homology exon 348344 348727 . - . gene_id "nbis-gene-295"; transcript_id "gene-C7A06_RS01770"; Dbxref "Genbank:WP_000778789.1"; ID "nbis-exon-306"; Name "WP_000778789.1"; Ontology_term "GO:0015940" "GO:0031638" "GO:0008080"; Parent "gene-C7A06_RS01770"; gbkey "CDS"; gene "panM"; go_function "N-acetyltransferase activity|0008080||IEA"; go_process "pantothenate biosynthetic process|0015940||IEA" "zymogen activation|0031638||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709229.1"; locus_tag "C7A06_RS01770"; product "aspartate 1-decarboxylase autocleavage activator PanM"; protein_id "WP_000778789.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1670 NZ_CP027599.1 Protein Homology CDS 348344 348727 . - 0 gene_id "nbis-gene-295"; transcript_id "gene-C7A06_RS01770"; Dbxref "Genbank:WP_000778789.1"; ID "cds-WP_000778789.1"; Name "WP_000778789.1"; Ontology_term "GO:0015940" "GO:0031638" "GO:0008080"; Parent "gene-C7A06_RS01770"; gbkey "CDS"; gene "panM"; go_function "N-acetyltransferase activity|0008080||IEA"; go_process "pantothenate biosynthetic process|0015940||IEA" "zymogen activation|0031638||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709229.1"; locus_tag "C7A06_RS01770"; product "aspartate 1-decarboxylase autocleavage activator PanM"; protein_id "WP_000778789.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1671 NZ_CP027599.1 RefSeq gene 349151 350260 . + . gene_id "nbis-gene-296"; ID "nbis-gene-296"; Name "livK"; gbkey "Gene"; gene "livK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01775";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1672 NZ_CP027599.1 RefSeq transcript 349151 350260 . + . gene_id "nbis-gene-296"; transcript_id "gene-C7A06_RS01775"; ID "gene-C7A06_RS01775"; Name "livK"; Parent "nbis-gene-296"; gbkey "Gene"; gene "livK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01775"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1673 NZ_CP027599.1 Protein Homology exon 349151 350260 . + . gene_id "nbis-gene-296"; transcript_id "gene-C7A06_RS01775"; Dbxref "Genbank:WP_000827696.1"; ID "nbis-exon-307"; Name "WP_000827696.1"; Parent "gene-C7A06_RS01775"; gbkey "CDS"; gene "livK"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417915.1"; locus_tag "C7A06_RS01775"; product "high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK"; protein_id "WP_000827696.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1674 NZ_CP027599.1 Protein Homology CDS 349151 350260 . + 0 gene_id "nbis-gene-296"; transcript_id "gene-C7A06_RS01775"; Dbxref "Genbank:WP_000827696.1"; ID "cds-WP_000827696.1"; Name "WP_000827696.1"; Parent "gene-C7A06_RS01775"; gbkey "CDS"; gene "livK"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417915.1"; locus_tag "C7A06_RS01775"; product "high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK"; protein_id "WP_000827696.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1675 NZ_CP027599.1 RefSeq gene 350308 351234 . + . gene_id "nbis-gene-297"; ID "nbis-gene-297"; Name "livH"; gbkey "Gene"; gene "livH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01780";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1676 NZ_CP027599.1 RefSeq transcript 350308 351234 . + . gene_id "nbis-gene-297"; transcript_id "gene-C7A06_RS01780"; ID "gene-C7A06_RS01780"; Name "livH"; Parent "nbis-gene-297"; gbkey "Gene"; gene "livH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01780"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1677 NZ_CP027599.1 Protein Homology exon 350308 351234 . + . gene_id "nbis-gene-297"; transcript_id "gene-C7A06_RS01780"; Dbxref "Genbank:WP_001295111.1"; ID "nbis-exon-308"; Name "WP_001295111.1"; Ontology_term "GO:0055085" "GO:0022857" "GO:0016021"; Parent "gene-C7A06_RS01780"; gbkey "CDS"; gene "livH"; go_component "integral component of membrane|0016021||IEA"; go_function "transmembrane transporter activity|0022857||IEA"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1"; locus_tag "C7A06_RS01780"; product "high-affinity branched-chain amino acid ABC transporter permease LivH"; protein_id "WP_001295111.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1678 NZ_CP027599.1 Protein Homology CDS 350308 351234 . + 0 gene_id "nbis-gene-297"; transcript_id "gene-C7A06_RS01780"; Dbxref "Genbank:WP_001295111.1"; ID "cds-WP_001295111.1"; Name "WP_001295111.1"; Ontology_term "GO:0055085" "GO:0022857" "GO:0016021"; Parent "gene-C7A06_RS01780"; gbkey "CDS"; gene "livH"; go_component "integral component of membrane|0016021||IEA"; go_function "transmembrane transporter activity|0022857||IEA"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1"; locus_tag "C7A06_RS01780"; product "high-affinity branched-chain amino acid ABC transporter permease LivH"; protein_id "WP_001295111.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1679 NZ_CP027599.1 RefSeq gene 351231 352508 . + . gene_id "nbis-gene-298"; ID "nbis-gene-298"; Name "livM"; gbkey "Gene"; gene "livM"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01785";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1680 NZ_CP027599.1 RefSeq transcript 351231 352508 . + . gene_id "nbis-gene-298"; transcript_id "gene-C7A06_RS01785"; ID "gene-C7A06_RS01785"; Name "livM"; Parent "nbis-gene-298"; gbkey "Gene"; gene "livM"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01785"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1681 NZ_CP027599.1 Protein Homology exon 351231 352508 . + . gene_id "nbis-gene-298"; transcript_id "gene-C7A06_RS01785"; Dbxref "Genbank:WP_000803799.1"; ID "nbis-exon-309"; Name "WP_000803799.1"; Parent "gene-C7A06_RS01785"; gbkey "CDS"; gene "livM"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312330.1"; locus_tag "C7A06_RS01785"; product "branched chain amino acid ABC transporter permease LivM"; protein_id "WP_000803799.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1682 NZ_CP027599.1 Protein Homology CDS 351231 352508 . + 0 gene_id "nbis-gene-298"; transcript_id "gene-C7A06_RS01785"; Dbxref "Genbank:WP_000803799.1"; ID "cds-WP_000803799.1"; Name "WP_000803799.1"; Parent "gene-C7A06_RS01785"; gbkey "CDS"; gene "livM"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312330.1"; locus_tag "C7A06_RS01785"; product "branched chain amino acid ABC transporter permease LivM"; protein_id "WP_000803799.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1683 NZ_CP027599.1 RefSeq gene 352505 353272 . + . gene_id "nbis-gene-299"; ID "nbis-gene-299"; Name "livG"; gbkey "Gene"; gene "livG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01790";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1684 NZ_CP027599.1 RefSeq transcript 352505 353272 . + . gene_id "nbis-gene-299"; transcript_id "gene-C7A06_RS01790"; ID "gene-C7A06_RS01790"; Name "livG"; Parent "nbis-gene-299"; gbkey "Gene"; gene "livG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01790"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1685 NZ_CP027599.1 Protein Homology exon 352505 353272 . + . gene_id "nbis-gene-299"; transcript_id "gene-C7A06_RS01790"; Dbxref "Genbank:WP_000082101.1"; ID "nbis-exon-310"; Name "WP_000082101.1"; Parent "gene-C7A06_RS01790"; gbkey "CDS"; gene "livG"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1"; locus_tag "C7A06_RS01790"; product "high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG"; protein_id "WP_000082101.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1686 NZ_CP027599.1 Protein Homology CDS 352505 353272 . + 0 gene_id "nbis-gene-299"; transcript_id "gene-C7A06_RS01790"; Dbxref "Genbank:WP_000082101.1"; ID "cds-WP_000082101.1"; Name "WP_000082101.1"; Parent "gene-C7A06_RS01790"; gbkey "CDS"; gene "livG"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1"; locus_tag "C7A06_RS01790"; product "high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG"; protein_id "WP_000082101.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1687 NZ_CP027599.1 RefSeq gene 353274 353987 . + . gene_id "nbis-gene-300"; ID "nbis-gene-300"; Name "livF"; gbkey "Gene"; gene "livF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01795";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1688 NZ_CP027599.1 RefSeq transcript 353274 353987 . + . gene_id "nbis-gene-300"; transcript_id "gene-C7A06_RS01795"; ID "gene-C7A06_RS01795"; Name "livF"; Parent "nbis-gene-300"; gbkey "Gene"; gene "livF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01795"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1689 NZ_CP027599.1 Protein Homology exon 353274 353987 . + . gene_id "nbis-gene-300"; transcript_id "gene-C7A06_RS01795"; Dbxref "Genbank:WP_000416895.1"; ID "nbis-exon-311"; Name "WP_000416895.1"; Parent "gene-C7A06_RS01795"; gbkey "CDS"; gene "livF"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312328.2"; locus_tag "C7A06_RS01795"; product "high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF"; protein_id "WP_000416895.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1690 NZ_CP027599.1 Protein Homology CDS 353274 353987 . + 0 gene_id "nbis-gene-300"; transcript_id "gene-C7A06_RS01795"; Dbxref "Genbank:WP_000416895.1"; ID "cds-WP_000416895.1"; Name "WP_000416895.1"; Parent "gene-C7A06_RS01795"; gbkey "CDS"; gene "livF"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312328.2"; locus_tag "C7A06_RS01795"; product "high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF"; protein_id "WP_000416895.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1691 NZ_CP027599.1 RefSeq gene 354383 355699 . + . gene_id "nbis-gene-301"; ID "nbis-gene-301"; Name "ugpB"; gbkey "Gene"; gene "ugpB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01800";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1692 NZ_CP027599.1 RefSeq transcript 354383 355699 . + . gene_id "nbis-gene-301"; transcript_id "gene-C7A06_RS01800"; ID "gene-C7A06_RS01800"; Name "ugpB"; Parent "nbis-gene-301"; gbkey "Gene"; gene "ugpB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01800"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1693 NZ_CP027599.1 Protein Homology exon 354383 355699 . + . gene_id "nbis-gene-301"; transcript_id "gene-C7A06_RS01800"; Dbxref "Genbank:WP_000803190.1"; ID "nbis-exon-312"; Name "WP_000803190.1"; Ontology_term "GO:0055085"; Parent "gene-C7A06_RS01800"; gbkey "CDS"; gene "ugpB"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312326.1"; locus_tag "C7A06_RS01800"; product "sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB"; protein_id "WP_000803190.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1694 NZ_CP027599.1 Protein Homology CDS 354383 355699 . + 0 gene_id "nbis-gene-301"; transcript_id "gene-C7A06_RS01800"; Dbxref "Genbank:WP_000803190.1"; ID "cds-WP_000803190.1"; Name "WP_000803190.1"; Ontology_term "GO:0055085"; Parent "gene-C7A06_RS01800"; gbkey "CDS"; gene "ugpB"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312326.1"; locus_tag "C7A06_RS01800"; product "sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB"; protein_id "WP_000803190.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1695 NZ_CP027599.1 RefSeq gene 355797 356684 . + . gene_id "nbis-gene-302"; ID "nbis-gene-302"; Name "ugpA"; gbkey "Gene"; gene "ugpA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01805";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1696 NZ_CP027599.1 RefSeq transcript 355797 356684 . + . gene_id "nbis-gene-302"; transcript_id "gene-C7A06_RS01805"; ID "gene-C7A06_RS01805"; Name "ugpA"; Parent "nbis-gene-302"; gbkey "Gene"; gene "ugpA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01805"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1697 NZ_CP027599.1 Protein Homology exon 355797 356684 . + . gene_id "nbis-gene-302"; transcript_id "gene-C7A06_RS01805"; Dbxref "Genbank:WP_000099276.1"; ID "nbis-exon-313"; Name "WP_000099276.1"; Parent "gene-C7A06_RS01805"; gbkey "CDS"; gene "ugpA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1"; locus_tag "C7A06_RS01805"; product "sn-glycerol-3-phosphate ABC transporter permease UgpA"; protein_id "WP_000099276.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1698 NZ_CP027599.1 Protein Homology CDS 355797 356684 . + 0 gene_id "nbis-gene-302"; transcript_id "gene-C7A06_RS01805"; Dbxref "Genbank:WP_000099276.1"; ID "cds-WP_000099276.1"; Name "WP_000099276.1"; Parent "gene-C7A06_RS01805"; gbkey "CDS"; gene "ugpA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1"; locus_tag "C7A06_RS01805"; product "sn-glycerol-3-phosphate ABC transporter permease UgpA"; protein_id "WP_000099276.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1699 NZ_CP027599.1 RefSeq gene 356681 357526 . + . gene_id "nbis-gene-303"; ID "nbis-gene-303"; Name "ugpE"; gbkey "Gene"; gene "ugpE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01810";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1700 NZ_CP027599.1 RefSeq transcript 356681 357526 . + . gene_id "nbis-gene-303"; transcript_id "gene-C7A06_RS01810"; ID "gene-C7A06_RS01810"; Name "ugpE"; Parent "nbis-gene-303"; gbkey "Gene"; gene "ugpE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01810"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1701 NZ_CP027599.1 Protein Homology exon 356681 357526 . + . gene_id "nbis-gene-303"; transcript_id "gene-C7A06_RS01810"; Dbxref "Genbank:WP_000572164.1"; ID "nbis-exon-314"; Name "WP_000572164.1"; Ontology_term "GO:0015794" "GO:0005887" "GO:0055052"; Parent "gene-C7A06_RS01810"; gbkey "CDS"; gene "ugpE"; go_component "integral component of plasma membrane|0005887||IEA" "ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing|0055052||IEA"; go_process "glycerol-3-phosphate transmembrane transport|0015794||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1"; locus_tag "C7A06_RS01810"; product "sn-glycerol-3-phosphate ABC transporter permease UgpE"; protein_id "WP_000572164.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1702 NZ_CP027599.1 Protein Homology CDS 356681 357526 . + 0 gene_id "nbis-gene-303"; transcript_id "gene-C7A06_RS01810"; Dbxref "Genbank:WP_000572164.1"; ID "cds-WP_000572164.1"; Name "WP_000572164.1"; Ontology_term "GO:0015794" "GO:0005887" "GO:0055052"; Parent "gene-C7A06_RS01810"; gbkey "CDS"; gene "ugpE"; go_component "integral component of plasma membrane|0005887||IEA" "ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing|0055052||IEA"; go_process "glycerol-3-phosphate transmembrane transport|0015794||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1"; locus_tag "C7A06_RS01810"; product "sn-glycerol-3-phosphate ABC transporter permease UgpE"; protein_id "WP_000572164.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1703 NZ_CP027599.1 RefSeq gene 357528 358598 . + . gene_id "nbis-gene-304"; ID "nbis-gene-304"; Name "ugpC"; gbkey "Gene"; gene "ugpC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01815";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1704 NZ_CP027599.1 RefSeq transcript 357528 358598 . + . gene_id "nbis-gene-304"; transcript_id "gene-C7A06_RS01815"; ID "gene-C7A06_RS01815"; Name "ugpC"; Parent "nbis-gene-304"; gbkey "Gene"; gene "ugpC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01815"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1705 NZ_CP027599.1 Protein Homology exon 357528 358598 . + . gene_id "nbis-gene-304"; transcript_id "gene-C7A06_RS01815"; Dbxref "Genbank:WP_000907790.1"; ID "nbis-exon-315"; Name "WP_000907790.1"; Parent "gene-C7A06_RS01815"; gbkey "CDS"; gene "ugpC"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417907.2"; locus_tag "C7A06_RS01815"; product "sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC"; protein_id "WP_000907790.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1706 NZ_CP027599.1 Protein Homology CDS 357528 358598 . + 0 gene_id "nbis-gene-304"; transcript_id "gene-C7A06_RS01815"; Dbxref "Genbank:WP_000907790.1"; ID "cds-WP_000907790.1"; Name "WP_000907790.1"; Parent "gene-C7A06_RS01815"; gbkey "CDS"; gene "ugpC"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417907.2"; locus_tag "C7A06_RS01815"; product "sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC"; protein_id "WP_000907790.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1707 NZ_CP027599.1 RefSeq gene 358595 359338 . + . gene_id "nbis-gene-305"; ID "nbis-gene-305"; Name "ugpQ"; gbkey "Gene"; gene "ugpQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01820";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1708 NZ_CP027599.1 RefSeq transcript 358595 359338 . + . gene_id "nbis-gene-305"; transcript_id "gene-C7A06_RS01820"; ID "gene-C7A06_RS01820"; Name "ugpQ"; Parent "nbis-gene-305"; gbkey "Gene"; gene "ugpQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01820"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1709 NZ_CP027599.1 Protein Homology exon 358595 359338 . + . gene_id "nbis-gene-305"; transcript_id "gene-C7A06_RS01820"; Dbxref "Genbank:WP_000073591.1"; ID "nbis-exon-316"; Name "WP_000073591.1"; Ontology_term "GO:0006629" "GO:0008081"; Parent "gene-C7A06_RS01820"; gbkey "CDS"; gene "ugpQ"; go_function "phosphoric diester hydrolase activity|0008081||IEA"; go_process "lipid metabolic process|0006629||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709219.1"; locus_tag "C7A06_RS01820"; product "glycerophosphodiester phosphodiesterase"; protein_id "WP_000073591.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1710 NZ_CP027599.1 Protein Homology CDS 358595 359338 . + 0 gene_id "nbis-gene-305"; transcript_id "gene-C7A06_RS01820"; Dbxref "Genbank:WP_000073591.1"; ID "cds-WP_000073591.1"; Name "WP_000073591.1"; Ontology_term "GO:0006629" "GO:0008081"; Parent "gene-C7A06_RS01820"; gbkey "CDS"; gene "ugpQ"; go_function "phosphoric diester hydrolase activity|0008081||IEA"; go_process "lipid metabolic process|0006629||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709219.1"; locus_tag "C7A06_RS01820"; product "glycerophosphodiester phosphodiesterase"; protein_id "WP_000073591.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1711 NZ_CP027599.1 RefSeq gene 359325 359765 . - . gene_id "nbis-gene-306"; ID "nbis-gene-306"; Name "yhhA"; gbkey "Gene"; gene "yhhA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01825";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1712 NZ_CP027599.1 RefSeq transcript 359325 359765 . - . gene_id "nbis-gene-306"; transcript_id "gene-C7A06_RS01825"; ID "gene-C7A06_RS01825"; Name "yhhA"; Parent "nbis-gene-306"; gbkey "Gene"; gene "yhhA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01825"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1713 NZ_CP027599.1 Protein Homology exon 359325 359765 . - . gene_id "nbis-gene-306"; transcript_id "gene-C7A06_RS01825"; Dbxref "Genbank:WP_000825996.1"; ID "nbis-exon-317"; Name "WP_000825996.1"; Parent "gene-C7A06_RS01825"; gbkey "CDS"; gene "yhhA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417905.1"; locus_tag "C7A06_RS01825"; product "DUF2756 family protein"; protein_id "WP_000825996.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1714 NZ_CP027599.1 Protein Homology CDS 359325 359765 . - 0 gene_id "nbis-gene-306"; transcript_id "gene-C7A06_RS01825"; Dbxref "Genbank:WP_000825996.1"; ID "cds-WP_000825996.1"; Name "WP_000825996.1"; Parent "gene-C7A06_RS01825"; gbkey "CDS"; gene "yhhA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417905.1"; locus_tag "C7A06_RS01825"; product "DUF2756 family protein"; protein_id "WP_000825996.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1715 NZ_CP027599.1 RefSeq gene 359885 361627 . + . gene_id "nbis-gene-307"; ID "nbis-gene-307"; Name "ggt"; gbkey "Gene"; gene "ggt"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01830";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1716 NZ_CP027599.1 RefSeq transcript 359885 361627 . + . gene_id "nbis-gene-307"; transcript_id "gene-C7A06_RS01830"; ID "gene-C7A06_RS01830"; Name "ggt"; Parent "nbis-gene-307"; gbkey "Gene"; gene "ggt"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01830"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1717 NZ_CP027599.1 Protein Homology exon 359885 361627 . + . gene_id "nbis-gene-307"; transcript_id "gene-C7A06_RS01830"; Dbxref "Genbank:WP_000595084.1"; ID "nbis-exon-318"; Name "WP_000595084.1"; Ontology_term "GO:0006751" "GO:0036374"; Parent "gene-C7A06_RS01830"; gbkey "CDS"; gene "ggt"; go_function "glutathione hydrolase activity|0036374||IEA"; go_process "glutathione catabolic process|0006751||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417904.1"; locus_tag "C7A06_RS01830"; product "gamma-glutamyltransferase"; protein_id "WP_000595084.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1718 NZ_CP027599.1 Protein Homology CDS 359885 361627 . + 0 gene_id "nbis-gene-307"; transcript_id "gene-C7A06_RS01830"; Dbxref "Genbank:WP_000595084.1"; ID "cds-WP_000595084.1"; Name "WP_000595084.1"; Ontology_term "GO:0006751" "GO:0036374"; Parent "gene-C7A06_RS01830"; gbkey "CDS"; gene "ggt"; go_function "glutathione hydrolase activity|0036374||IEA"; go_process "glutathione catabolic process|0006751||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417904.1"; locus_tag "C7A06_RS01830"; product "gamma-glutamyltransferase"; protein_id "WP_000595084.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1719 NZ_CP027599.1 RefSeq gene 361665 361949 . - . gene_id "nbis-gene-308"; ID "nbis-gene-308"; Name "yrhB"; gbkey "Gene"; gene "yrhB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01835";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1720 NZ_CP027599.1 RefSeq transcript 361665 361949 . - . gene_id "nbis-gene-308"; transcript_id "gene-C7A06_RS01835"; ID "gene-C7A06_RS01835"; Name "yrhB"; Parent "nbis-gene-308"; gbkey "Gene"; gene "yrhB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01835"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1721 NZ_CP027599.1 Protein Homology exon 361665 361949 . - . gene_id "nbis-gene-308"; transcript_id "gene-C7A06_RS01835"; Dbxref "Genbank:WP_000634159.1"; ID "nbis-exon-319"; Name "WP_000634159.1"; Parent "gene-C7A06_RS01835"; gbkey "CDS"; gene "yrhB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417903.1"; locus_tag "C7A06_RS01835"; product "YrhB family protein"; protein_id "WP_000634159.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1722 NZ_CP027599.1 Protein Homology CDS 361665 361949 . - 0 gene_id "nbis-gene-308"; transcript_id "gene-C7A06_RS01835"; Dbxref "Genbank:WP_000634159.1"; ID "cds-WP_000634159.1"; Name "WP_000634159.1"; Parent "gene-C7A06_RS01835"; gbkey "CDS"; gene "yrhB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417903.1"; locus_tag "C7A06_RS01835"; product "YrhB family protein"; protein_id "WP_000634159.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1723 NZ_CP027599.1 RefSeq gene 362149 362304 . - . gene_id "nbis-gene-5709"; ID "nbis-gene-5709"; Name "C7A06_RS33925"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33925";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1724 NZ_CP027599.1 RefSeq transcript 362149 362304 . - . gene_id "nbis-gene-5709"; transcript_id "gene-C7A06_RS33925"; ID "gene-C7A06_RS33925"; Name "C7A06_RS33925"; Parent "nbis-gene-5709"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS33925"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1725 NZ_CP027599.1 Protein Homology exon 362149 362304 . - . gene_id "nbis-gene-5709"; transcript_id "gene-C7A06_RS33925"; Dbxref "Genbank:WP_001307436.1"; ID "nbis-exon-5991"; Name "WP_001307436.1"; Parent "gene-C7A06_RS33925"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_009518820.1"; locus_tag "C7A06_RS33925"; product "hypothetical protein"; protein_id "WP_001307436.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1726 NZ_CP027599.1 Protein Homology CDS 362149 362304 . - 0 gene_id "nbis-gene-5709"; transcript_id "gene-C7A06_RS33925"; Dbxref "Genbank:WP_001307436.1"; ID "cds-WP_001307436.1"; Name "WP_001307436.1"; Parent "gene-C7A06_RS33925"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_009518820.1"; locus_tag "C7A06_RS33925"; product "hypothetical protein"; protein_id "WP_001307436.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1727 NZ_CP027599.1 RefSeq gene 362399 362893 . - . gene_id "nbis-gene-309"; ID "nbis-gene-309"; Name "yrhA"; gbkey "Gene"; gene "yrhA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01845";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1728 NZ_CP027599.1 RefSeq transcript 362399 362893 . - . gene_id "nbis-gene-309"; transcript_id "gene-C7A06_RS01845"; ID "gene-C7A06_RS01845"; Name "yrhA"; Parent "nbis-gene-309"; gbkey "Gene"; gene "yrhA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01845"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1729 NZ_CP027599.1 Protein Homology exon 362399 362893 . - . gene_id "nbis-gene-309"; transcript_id "gene-C7A06_RS01845"; Dbxref "Genbank:WP_000988496.1"; ID "nbis-exon-320"; Name "WP_000988496.1"; Parent "gene-C7A06_RS01845"; gbkey "CDS"; gene "yrhA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000988499.1"; locus_tag "C7A06_RS01845"; product "protein YrhA"; protein_id "WP_000988496.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1730 NZ_CP027599.1 Protein Homology CDS 362399 362893 . - 0 gene_id "nbis-gene-309"; transcript_id "gene-C7A06_RS01845"; Dbxref "Genbank:WP_000988496.1"; ID "cds-WP_000988496.1"; Name "WP_000988496.1"; Parent "gene-C7A06_RS01845"; gbkey "CDS"; gene "yrhA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000988499.1"; locus_tag "C7A06_RS01845"; product "protein YrhA"; protein_id "WP_000988496.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1731 NZ_CP027599.1 RefSeq gene 362890 364068 . - . gene_id "nbis-gene-310"; ID "nbis-gene-310"; Name "hcp"; gbkey "Gene"; gene "hcp"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01850";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1732 NZ_CP027599.1 RefSeq transcript 362890 364068 . - . gene_id "nbis-gene-310"; transcript_id "gene-C7A06_RS01850"; ID "gene-C7A06_RS01850"; Name "hcp"; Parent "nbis-gene-310"; gbkey "Gene"; gene "hcp"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01850"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1733 NZ_CP027599.1 Protein Homology exon 362890 364068 . - . gene_id "nbis-gene-310"; transcript_id "gene-C7A06_RS01850"; Dbxref "Genbank:WP_000065894.1"; ID "nbis-exon-321"; Name "WP_000065894.1"; Ontology_term "GO:0003674"; Parent "gene-C7A06_RS01850"; gbkey "CDS"; gene "hcp"; go_function "molecular_function|0003674||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417899.1"; locus_tag "C7A06_RS01850"; product "Hcp1 family type VI secretion system effector"; protein_id "WP_000065894.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1734 NZ_CP027599.1 Protein Homology CDS 362890 364068 . - 0 gene_id "nbis-gene-310"; transcript_id "gene-C7A06_RS01850"; Dbxref "Genbank:WP_000065894.1"; ID "cds-WP_000065894.1"; Name "WP_000065894.1"; Ontology_term "GO:0003674"; Parent "gene-C7A06_RS01850"; gbkey "CDS"; gene "hcp"; go_function "molecular_function|0003674||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417899.1"; locus_tag "C7A06_RS01850"; product "Hcp1 family type VI secretion system effector"; protein_id "WP_000065894.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1735 NZ_CP027599.1 RefSeq gene 364305 364793 . - . gene_id "nbis-gene-311"; ID "nbis-gene-311"; Name "yhhY"; gbkey "Gene"; gene "yhhY"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01855";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1736 NZ_CP027599.1 RefSeq transcript 364305 364793 . - . gene_id "nbis-gene-311"; transcript_id "gene-C7A06_RS01855"; ID "gene-C7A06_RS01855"; Name "yhhY"; Parent "nbis-gene-311"; gbkey "Gene"; gene "yhhY"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01855"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1737 NZ_CP027599.1 Protein Homology exon 364305 364793 . - . gene_id "nbis-gene-311"; transcript_id "gene-C7A06_RS01855"; Dbxref "Genbank:WP_001295206.1"; ID "nbis-exon-322"; Name "WP_001295206.1"; Ontology_term "GO:0008080"; Parent "gene-C7A06_RS01855"; gbkey "CDS"; gene "yhhY"; go_function "N-acetyltransferase activity|0008080||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417898.1"; locus_tag "C7A06_RS01855"; product "N-acetyltransferase"; protein_id "WP_001295206.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1738 NZ_CP027599.1 Protein Homology CDS 364305 364793 . - 0 gene_id "nbis-gene-311"; transcript_id "gene-C7A06_RS01855"; Dbxref "Genbank:WP_001295206.1"; ID "cds-WP_001295206.1"; Name "WP_001295206.1"; Ontology_term "GO:0008080"; Parent "gene-C7A06_RS01855"; gbkey "CDS"; gene "yhhY"; go_function "N-acetyltransferase activity|0008080||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417898.1"; locus_tag "C7A06_RS01855"; product "N-acetyltransferase"; protein_id "WP_001295206.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1739 NZ_CP027599.1 RefSeq gene 365126 366163 . + . gene_id "nbis-gene-312"; ID "nbis-gene-312"; Name "yhhX"; gbkey "Gene"; gene "yhhX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01865";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1740 NZ_CP027599.1 RefSeq transcript 365126 366163 . + . gene_id "nbis-gene-312"; transcript_id "gene-C7A06_RS01865"; ID "gene-C7A06_RS01865"; Name "yhhX"; Parent "nbis-gene-312"; gbkey "Gene"; gene "yhhX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01865"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1741 NZ_CP027599.1 Protein Homology exon 365126 366163 . + . gene_id "nbis-gene-312"; transcript_id "gene-C7A06_RS01865"; Dbxref "Genbank:WP_000236302.1"; ID "nbis-exon-323"; Name "WP_000236302.1"; Ontology_term "GO:0000166"; Parent "gene-C7A06_RS01865"; gbkey "CDS"; gene "yhhX"; go_function "nucleotide binding|0000166||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709215.2"; locus_tag "C7A06_RS01865"; product "oxidoreductase"; protein_id "WP_000236302.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1742 NZ_CP027599.1 Protein Homology CDS 365126 366163 . + 0 gene_id "nbis-gene-312"; transcript_id "gene-C7A06_RS01865"; Dbxref "Genbank:WP_000236302.1"; ID "cds-WP_000236302.1"; Name "WP_000236302.1"; Ontology_term "GO:0000166"; Parent "gene-C7A06_RS01865"; gbkey "CDS"; gene "yhhX"; go_function "nucleotide binding|0000166||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709215.2"; locus_tag "C7A06_RS01865"; product "oxidoreductase"; protein_id "WP_000236302.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1743 NZ_CP027599.1 RefSeq gene 366286 366981 . + . gene_id "nbis-gene-313"; ID "nbis-gene-313"; Name "yhhW"; gbkey "Gene"; gene "yhhW"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01870";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1744 NZ_CP027599.1 RefSeq transcript 366286 366981 . + . gene_id "nbis-gene-313"; transcript_id "gene-C7A06_RS01870"; ID "gene-C7A06_RS01870"; Name "yhhW"; Parent "nbis-gene-313"; gbkey "Gene"; gene "yhhW"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01870"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1745 NZ_CP027599.1 Protein Homology exon 366286 366981 . + . gene_id "nbis-gene-313"; transcript_id "gene-C7A06_RS01870"; Dbxref "Genbank:WP_000639811.1"; ID "nbis-exon-324"; Name "WP_000639811.1"; Parent "gene-C7A06_RS01870"; gbkey "CDS"; gene "yhhW"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1"; locus_tag "C7A06_RS01870"; product "quercetin 2,3-dioxygenase"; protein_id "WP_000639811.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1746 NZ_CP027599.1 Protein Homology CDS 366286 366981 . + 0 gene_id "nbis-gene-313"; transcript_id "gene-C7A06_RS01870"; Dbxref "Genbank:WP_000639811.1"; ID "cds-WP_000639811.1"; Name "WP_000639811.1"; Parent "gene-C7A06_RS01870"; gbkey "CDS"; gene "yhhW"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1"; locus_tag "C7A06_RS01870"; product "quercetin 2,3-dioxygenase"; protein_id "WP_000639811.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1747 NZ_CP027599.1 RefSeq gene 367205 368200 . + . gene_id "nbis-gene-314"; ID "nbis-gene-314"; Name "gntR"; gbkey "Gene"; gene "gntR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01875";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1748 NZ_CP027599.1 RefSeq transcript 367205 368200 . + . gene_id "nbis-gene-314"; transcript_id "gene-C7A06_RS01875"; ID "gene-C7A06_RS01875"; Name "gntR"; Parent "nbis-gene-314"; gbkey "Gene"; gene "gntR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01875"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1749 NZ_CP027599.1 Protein Homology exon 367205 368200 . + . gene_id "nbis-gene-314"; transcript_id "gene-C7A06_RS01875"; Dbxref "Genbank:WP_000730258.1"; ID "nbis-exon-325"; Name "WP_000730258.1"; Ontology_term "GO:0006355" "GO:0003677"; Parent "gene-C7A06_RS01875"; gbkey "CDS"; gene "gntR"; go_function "DNA binding|0003677||IEA"; go_process "regulation of transcription, DNA-templated|0006355||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1"; locus_tag "C7A06_RS01875"; product "gluconate operon transcriptional repressor GntR"; protein_id "WP_000730258.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1750 NZ_CP027599.1 Protein Homology CDS 367205 368200 . + 0 gene_id "nbis-gene-314"; transcript_id "gene-C7A06_RS01875"; Dbxref "Genbank:WP_000730258.1"; ID "cds-WP_000730258.1"; Name "WP_000730258.1"; Ontology_term "GO:0006355" "GO:0003677"; Parent "gene-C7A06_RS01875"; gbkey "CDS"; gene "gntR"; go_function "DNA binding|0003677||IEA"; go_process "regulation of transcription, DNA-templated|0006355||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1"; locus_tag "C7A06_RS01875"; product "gluconate operon transcriptional repressor GntR"; protein_id "WP_000730258.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1751 NZ_CP027599.1 RefSeq gene 368339 368866 . + . gene_id "nbis-gene-315"; ID "nbis-gene-315"; Name "gntK"; gbkey "Gene"; gene "gntK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01880";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1752 NZ_CP027599.1 RefSeq transcript 368339 368866 . + . gene_id "nbis-gene-315"; transcript_id "gene-C7A06_RS01880"; ID "gene-C7A06_RS01880"; Name "gntK"; Parent "nbis-gene-315"; gbkey "Gene"; gene "gntK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01880"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1753 NZ_CP027599.1 Protein Homology exon 368339 368866 . + . gene_id "nbis-gene-315"; transcript_id "gene-C7A06_RS01880"; Dbxref "Genbank:WP_000108330.1"; ID "nbis-exon-326"; Name "WP_000108330.1"; Parent "gene-C7A06_RS01880"; gbkey "CDS"; gene "gntK"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417894.2"; locus_tag "C7A06_RS01880"; product "gluconokinase"; protein_id "WP_000108330.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1754 NZ_CP027599.1 Protein Homology CDS 368339 368866 . + 0 gene_id "nbis-gene-315"; transcript_id "gene-C7A06_RS01880"; Dbxref "Genbank:WP_000108330.1"; ID "cds-WP_000108330.1"; Name "WP_000108330.1"; Parent "gene-C7A06_RS01880"; gbkey "CDS"; gene "gntK"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417894.2"; locus_tag "C7A06_RS01880"; product "gluconokinase"; protein_id "WP_000108330.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1755 NZ_CP027599.1 RefSeq gene 368870 370210 . + . gene_id "nbis-gene-316"; ID "nbis-gene-316"; Name "gntU"; gbkey "Gene"; gene "gntU"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01885";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1756 NZ_CP027599.1 RefSeq transcript 368870 370210 . + . gene_id "nbis-gene-316"; transcript_id "gene-C7A06_RS01885"; ID "gene-C7A06_RS01885"; Name "gntU"; Parent "nbis-gene-316"; gbkey "Gene"; gene "gntU"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01885"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1757 NZ_CP027599.1 Protein Homology exon 368870 370210 . + . gene_id "nbis-gene-316"; transcript_id "gene-C7A06_RS01885"; Dbxref "Genbank:WP_000210111.1"; ID "nbis-exon-327"; Name "WP_000210111.1"; Ontology_term "GO:0035429" "GO:0015128" "GO:0016020"; Parent "gene-C7A06_RS01885"; gbkey "CDS"; gene "gntU"; go_component "membrane|0016020||IEA"; go_function "gluconate transmembrane transporter activity|0015128||IEA"; go_process "gluconate transmembrane transport|0035429||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312312.1"; locus_tag "C7A06_RS01885"; product "gluconate transporter"; protein_id "WP_000210111.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1758 NZ_CP027599.1 Protein Homology CDS 368870 370210 . + 0 gene_id "nbis-gene-316"; transcript_id "gene-C7A06_RS01885"; Dbxref "Genbank:WP_000210111.1"; ID "cds-WP_000210111.1"; Name "WP_000210111.1"; Ontology_term "GO:0035429" "GO:0015128" "GO:0016020"; Parent "gene-C7A06_RS01885"; gbkey "CDS"; gene "gntU"; go_component "membrane|0016020||IEA"; go_function "gluconate transmembrane transporter activity|0015128||IEA"; go_process "gluconate transmembrane transport|0035429||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312312.1"; locus_tag "C7A06_RS01885"; product "gluconate transporter"; protein_id "WP_000210111.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1759 NZ_CP027599.1 RefSeq gene 370267 370860 . - . gene_id "nbis-gene-317"; ID "nbis-gene-317"; Name "yhgN"; gbkey "Gene"; gene "yhgN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01890";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1760 NZ_CP027599.1 RefSeq transcript 370267 370860 . - . gene_id "nbis-gene-317"; transcript_id "gene-C7A06_RS01890"; ID "gene-C7A06_RS01890"; Name "yhgN"; Parent "nbis-gene-317"; gbkey "Gene"; gene "yhgN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01890"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1761 NZ_CP027599.1 Protein Homology exon 370267 370860 . - . gene_id "nbis-gene-317"; transcript_id "gene-C7A06_RS01890"; Dbxref "Genbank:WP_001002544.1"; ID "nbis-exon-328"; Name "WP_001002544.1"; Parent "gene-C7A06_RS01890"; gbkey "CDS"; gene "yhgN"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312306.1"; locus_tag "C7A06_RS01890"; product "NAAT family transporter YhgN"; protein_id "WP_001002544.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1762 NZ_CP027599.1 Protein Homology CDS 370267 370860 . - 0 gene_id "nbis-gene-317"; transcript_id "gene-C7A06_RS01890"; Dbxref "Genbank:WP_001002544.1"; ID "cds-WP_001002544.1"; Name "WP_001002544.1"; Parent "gene-C7A06_RS01890"; gbkey "CDS"; gene "yhgN"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312306.1"; locus_tag "C7A06_RS01890"; product "NAAT family transporter YhgN"; protein_id "WP_001002544.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1763 NZ_CP027599.1 RefSeq gene 371052 372155 . + . gene_id "nbis-gene-318"; ID "nbis-gene-318"; Name "asd"; gbkey "Gene"; gene "asd"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01895";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1764 NZ_CP027599.1 RefSeq transcript 371052 372155 . + . gene_id "nbis-gene-318"; transcript_id "gene-C7A06_RS01895"; ID "gene-C7A06_RS01895"; Name "asd"; Parent "nbis-gene-318"; gbkey "Gene"; gene "asd"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01895"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1765 NZ_CP027599.1 Protein Homology exon 371052 372155 . + . gene_id "nbis-gene-318"; transcript_id "gene-C7A06_RS01895"; Dbxref "Genbank:WP_000799956.1"; ID "nbis-exon-329"; Name "WP_000799956.1"; Ontology_term "GO:0009089" "GO:0004073"; Parent "gene-C7A06_RS01895"; gbkey "CDS"; gene "asd"; go_function "aspartate-semialdehyde dehydrogenase activity|0004073||IEA"; go_process "lysine biosynthetic process via diaminopimelate|0009089||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312305.1"; locus_tag "C7A06_RS01895"; product "aspartate-semialdehyde dehydrogenase"; protein_id "WP_000799956.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1766 NZ_CP027599.1 Protein Homology CDS 371052 372155 . + 0 gene_id "nbis-gene-318"; transcript_id "gene-C7A06_RS01895"; Dbxref "Genbank:WP_000799956.1"; ID "cds-WP_000799956.1"; Name "WP_000799956.1"; Ontology_term "GO:0009089" "GO:0004073"; Parent "gene-C7A06_RS01895"; gbkey "CDS"; gene "asd"; go_function "aspartate-semialdehyde dehydrogenase activity|0004073||IEA"; go_process "lysine biosynthetic process via diaminopimelate|0009089||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312305.1"; locus_tag "C7A06_RS01895"; product "aspartate-semialdehyde dehydrogenase"; protein_id "WP_000799956.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1767 NZ_CP027599.1 RefSeq gene 372229 372270 . + . gene_id "nbis-gene-5811"; ID "nbis-gene-5811"; Name "C7A06_RS34690"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS34690";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1768 NZ_CP027599.1 RefSeq transcript 372229 372270 . + . gene_id "nbis-gene-5811"; transcript_id "gene-C7A06_RS34690"; ID "gene-C7A06_RS34690"; Name "C7A06_RS34690"; Parent "nbis-gene-5811"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS34690"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1769 NZ_CP027599.1 Protein Homology exon 372229 372270 . + . gene_id "nbis-gene-5811"; transcript_id "gene-C7A06_RS34690"; Dbxref "Genbank:WP_211180509.1"; ID "nbis-exon-6120"; Name "WP_211180509.1"; Parent "gene-C7A06_RS34690"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_010051201.1"; locus_tag "C7A06_RS34690"; product "protein YhgO"; protein_id "WP_211180509.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1770 NZ_CP027599.1 Protein Homology CDS 372229 372270 . + 0 gene_id "nbis-gene-5811"; transcript_id "gene-C7A06_RS34690"; Dbxref "Genbank:WP_211180509.1"; ID "cds-WP_211180509.1"; Name "WP_211180509.1"; Parent "gene-C7A06_RS34690"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_010051201.1"; locus_tag "C7A06_RS34690"; product "protein YhgO"; protein_id "WP_211180509.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1771 NZ_CP027599.1 RefSeq gene 372428 374614 . + . gene_id "nbis-gene-319"; ID "nbis-gene-319"; Name "glgB"; gbkey "Gene"; gene "glgB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01900";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1772 NZ_CP027599.1 RefSeq transcript 372428 374614 . + . gene_id "nbis-gene-319"; transcript_id "gene-C7A06_RS01900"; ID "gene-C7A06_RS01900"; Name "glgB"; Parent "nbis-gene-319"; gbkey "Gene"; gene "glgB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01900"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1773 NZ_CP027599.1 Protein Homology exon 372428 374614 . + . gene_id "nbis-gene-319"; transcript_id "gene-C7A06_RS01900"; Dbxref "Genbank:WP_044164805.1"; ID "nbis-exon-330"; Name "WP_044164805.1"; Ontology_term "GO:0005978" "GO:0003844"; Parent "gene-C7A06_RS01900"; gbkey "CDS"; gene "glgB"; go_function "1,4-alpha-glucan branching enzyme activity|0003844||IEA"; go_process "glycogen biosynthetic process|0005978||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417890.1"; locus_tag "C7A06_RS01900"; product "1,4-alpha-glucan branching enzyme"; protein_id "WP_044164805.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1774 NZ_CP027599.1 Protein Homology CDS 372428 374614 . + 0 gene_id "nbis-gene-319"; transcript_id "gene-C7A06_RS01900"; Dbxref "Genbank:WP_044164805.1"; ID "cds-WP_044164805.1"; Name "WP_044164805.1"; Ontology_term "GO:0005978" "GO:0003844"; Parent "gene-C7A06_RS01900"; gbkey "CDS"; gene "glgB"; go_function "1,4-alpha-glucan branching enzyme activity|0003844||IEA"; go_process "glycogen biosynthetic process|0005978||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417890.1"; locus_tag "C7A06_RS01900"; product "1,4-alpha-glucan branching enzyme"; protein_id "WP_044164805.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1775 NZ_CP027599.1 RefSeq gene 374611 376584 . + . gene_id "nbis-gene-320"; ID "nbis-gene-320"; Name "glgX"; gbkey "Gene"; gene "glgX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01905";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1776 NZ_CP027599.1 RefSeq transcript 374611 376584 . + . gene_id "nbis-gene-320"; transcript_id "gene-C7A06_RS01905"; ID "gene-C7A06_RS01905"; Name "glgX"; Parent "nbis-gene-320"; gbkey "Gene"; gene "glgX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01905"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1777 NZ_CP027599.1 Protein Homology exon 374611 376584 . + . gene_id "nbis-gene-320"; transcript_id "gene-C7A06_RS01905"; Dbxref "Genbank:WP_000192523.1"; ID "nbis-exon-331"; Name "WP_000192523.1"; Ontology_term "GO:0005980" "GO:0004133"; Parent "gene-C7A06_RS01905"; gbkey "CDS"; gene "glgX"; go_function "glycogen debranching enzyme activity|0004133||IEA"; go_process "glycogen catabolic process|0005980||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417889.1"; locus_tag "C7A06_RS01905"; product "glycogen debranching protein GlgX"; protein_id "WP_000192523.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1778 NZ_CP027599.1 Protein Homology CDS 374611 376584 . + 0 gene_id "nbis-gene-320"; transcript_id "gene-C7A06_RS01905"; Dbxref "Genbank:WP_000192523.1"; ID "cds-WP_000192523.1"; Name "WP_000192523.1"; Ontology_term "GO:0005980" "GO:0004133"; Parent "gene-C7A06_RS01905"; gbkey "CDS"; gene "glgX"; go_function "glycogen debranching enzyme activity|0004133||IEA"; go_process "glycogen catabolic process|0005980||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417889.1"; locus_tag "C7A06_RS01905"; product "glycogen debranching protein GlgX"; protein_id "WP_000192523.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1779 NZ_CP027599.1 RefSeq gene 376602 377897 . + . gene_id "nbis-gene-321"; ID "nbis-gene-321"; Name "glgC"; gbkey "Gene"; gene "glgC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01910";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1780 NZ_CP027599.1 RefSeq transcript 376602 377897 . + . gene_id "nbis-gene-321"; transcript_id "gene-C7A06_RS01910"; ID "gene-C7A06_RS01910"; Name "glgC"; Parent "nbis-gene-321"; gbkey "Gene"; gene "glgC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01910"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1781 NZ_CP027599.1 Protein Homology exon 376602 377897 . + . gene_id "nbis-gene-321"; transcript_id "gene-C7A06_RS01910"; Dbxref "Genbank:WP_000253975.1"; ID "nbis-exon-332"; Name "WP_000253975.1"; Ontology_term "GO:0005978" "GO:0008878"; Parent "gene-C7A06_RS01910"; gbkey "CDS"; gene "glgC"; go_function "glucose-1-phosphate adenylyltransferase activity|0008878||IEA"; go_process "glycogen biosynthetic process|0005978||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312302.1"; locus_tag "C7A06_RS01910"; product "glucose-1-phosphate adenylyltransferase"; protein_id "WP_000253975.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1782 NZ_CP027599.1 Protein Homology CDS 376602 377897 . + 0 gene_id "nbis-gene-321"; transcript_id "gene-C7A06_RS01910"; Dbxref "Genbank:WP_000253975.1"; ID "cds-WP_000253975.1"; Name "WP_000253975.1"; Ontology_term "GO:0005978" "GO:0008878"; Parent "gene-C7A06_RS01910"; gbkey "CDS"; gene "glgC"; go_function "glucose-1-phosphate adenylyltransferase activity|0008878||IEA"; go_process "glycogen biosynthetic process|0005978||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312302.1"; locus_tag "C7A06_RS01910"; product "glucose-1-phosphate adenylyltransferase"; protein_id "WP_000253975.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1783 NZ_CP027599.1 RefSeq gene 377897 379330 . + . gene_id "nbis-gene-322"; ID "nbis-gene-322"; Name "glgA"; gbkey "Gene"; gene "glgA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01915";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1784 NZ_CP027599.1 RefSeq transcript 377897 379330 . + . gene_id "nbis-gene-322"; transcript_id "gene-C7A06_RS01915"; ID "gene-C7A06_RS01915"; Name "glgA"; Parent "nbis-gene-322"; gbkey "Gene"; gene "glgA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01915"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1785 NZ_CP027599.1 Protein Homology exon 377897 379330 . + . gene_id "nbis-gene-322"; transcript_id "gene-C7A06_RS01915"; Dbxref "Genbank:WP_001197646.1"; ID "nbis-exon-333"; Name "WP_001197646.1"; Ontology_term "GO:0004373"; Parent "gene-C7A06_RS01915"; gbkey "CDS"; gene "glgA"; go_function "glycogen (starch) synthase activity|0004373||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312301.1"; locus_tag "C7A06_RS01915"; product "glycogen synthase GlgA"; protein_id "WP_001197646.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1786 NZ_CP027599.1 Protein Homology CDS 377897 379330 . + 0 gene_id "nbis-gene-322"; transcript_id "gene-C7A06_RS01915"; Dbxref "Genbank:WP_001197646.1"; ID "cds-WP_001197646.1"; Name "WP_001197646.1"; Ontology_term "GO:0004373"; Parent "gene-C7A06_RS01915"; gbkey "CDS"; gene "glgA"; go_function "glycogen (starch) synthase activity|0004373||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312301.1"; locus_tag "C7A06_RS01915"; product "glycogen synthase GlgA"; protein_id "WP_001197646.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1787 NZ_CP027599.1 RefSeq gene 379349 381796 . + . gene_id "nbis-gene-323"; ID "nbis-gene-323"; Name "glgP"; gbkey "Gene"; gene "glgP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01920";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1788 NZ_CP027599.1 RefSeq transcript 379349 381796 . + . gene_id "nbis-gene-323"; transcript_id "gene-C7A06_RS01920"; ID "gene-C7A06_RS01920"; Name "glgP"; Parent "nbis-gene-323"; gbkey "Gene"; gene "glgP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01920"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1789 NZ_CP027599.1 Protein Homology exon 379349 381796 . + . gene_id "nbis-gene-323"; transcript_id "gene-C7A06_RS01920"; Dbxref "Genbank:WP_000993449.1"; ID "nbis-exon-334"; Name "WP_000993449.1"; Ontology_term "GO:0005975" "GO:0008184"; Parent "gene-C7A06_RS01920"; gbkey "CDS"; gene "glgP"; go_function "glycogen phosphorylase activity|0008184||IEA"; go_process "carbohydrate metabolic process|0005975||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417886.1"; locus_tag "C7A06_RS01920"; product "glycogen phosphorylase"; protein_id "WP_000993449.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1790 NZ_CP027599.1 Protein Homology CDS 379349 381796 . + 0 gene_id "nbis-gene-323"; transcript_id "gene-C7A06_RS01920"; Dbxref "Genbank:WP_000993449.1"; ID "cds-WP_000993449.1"; Name "WP_000993449.1"; Ontology_term "GO:0005975" "GO:0008184"; Parent "gene-C7A06_RS01920"; gbkey "CDS"; gene "glgP"; go_function "glycogen phosphorylase activity|0008184||IEA"; go_process "carbohydrate metabolic process|0005975||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417886.1"; locus_tag "C7A06_RS01920"; product "glycogen phosphorylase"; protein_id "WP_000993449.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1791 NZ_CP027599.1 RefSeq gene 381922 383430 . + . gene_id "nbis-gene-324"; ID "nbis-gene-324"; Name "C7A06_RS01925"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01925";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1792 NZ_CP027599.1 RefSeq transcript 381922 383430 . + . gene_id "nbis-gene-324"; transcript_id "gene-C7A06_RS01925"; ID "gene-C7A06_RS01925"; Name "C7A06_RS01925"; Parent "nbis-gene-324"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01925"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1793 NZ_CP027599.1 Protein Homology exon 381922 383430 . + . gene_id "nbis-gene-324"; transcript_id "gene-C7A06_RS01925"; Dbxref "Genbank:WP_122989399.1"; ID "nbis-exon-335"; Name "WP_122989399.1"; Parent "gene-C7A06_RS01925"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001443257.1"; locus_tag "C7A06_RS01925"; product "PstS family phosphate ABC transporter substrate-binding protein"; protein_id "WP_122989399.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1794 NZ_CP027599.1 Protein Homology CDS 381922 383430 . + 0 gene_id "nbis-gene-324"; transcript_id "gene-C7A06_RS01925"; Dbxref "Genbank:WP_122989399.1"; ID "cds-WP_122989399.1"; Name "WP_122989399.1"; Parent "gene-C7A06_RS01925"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001443257.1"; locus_tag "C7A06_RS01925"; product "PstS family phosphate ABC transporter substrate-binding protein"; protein_id "WP_122989399.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1795 NZ_CP027599.1 RefSeq gene 383446 384156 . + . gene_id "nbis-gene-325"; ID "nbis-gene-325"; Name "C7A06_RS01930"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01930";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1796 NZ_CP027599.1 RefSeq transcript 383446 384156 . + . gene_id "nbis-gene-325"; transcript_id "gene-C7A06_RS01930"; ID "gene-C7A06_RS01930"; Name "C7A06_RS01930"; Parent "nbis-gene-325"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01930"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1797 NZ_CP027599.1 Protein Homology exon 383446 384156 . + . gene_id "nbis-gene-325"; transcript_id "gene-C7A06_RS01930"; Dbxref "Genbank:WP_000424553.1"; ID "nbis-exon-336"; Name "WP_000424553.1"; Parent "gene-C7A06_RS01930"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000424214.1"; locus_tag "C7A06_RS01930"; product "hypothetical protein"; protein_id "WP_000424553.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1798 NZ_CP027599.1 Protein Homology CDS 383446 384156 . + 0 gene_id "nbis-gene-325"; transcript_id "gene-C7A06_RS01930"; Dbxref "Genbank:WP_000424553.1"; ID "cds-WP_000424553.1"; Name "WP_000424553.1"; Parent "gene-C7A06_RS01930"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000424214.1"; locus_tag "C7A06_RS01930"; product "hypothetical protein"; protein_id "WP_000424553.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1799 NZ_CP027599.1 RefSeq gene 384159 384926 . + . gene_id "nbis-gene-326"; ID "nbis-gene-326"; Name "C7A06_RS01935"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01935";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1800 NZ_CP027599.1 RefSeq transcript 384159 384926 . + . gene_id "nbis-gene-326"; transcript_id "gene-C7A06_RS01935"; ID "gene-C7A06_RS01935"; Name "C7A06_RS01935"; Parent "nbis-gene-326"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01935"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1801 NZ_CP027599.1 Protein Homology exon 384159 384926 . + . gene_id "nbis-gene-326"; transcript_id "gene-C7A06_RS01935"; Dbxref "Genbank:WP_001182130.1"; ID "nbis-exon-337"; Name "WP_001182130.1"; Parent "gene-C7A06_RS01935"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001182130.1"; locus_tag "C7A06_RS01935"; product "hypothetical protein"; protein_id "WP_001182130.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1802 NZ_CP027599.1 Protein Homology CDS 384159 384926 . + 0 gene_id "nbis-gene-326"; transcript_id "gene-C7A06_RS01935"; Dbxref "Genbank:WP_001182130.1"; ID "cds-WP_001182130.1"; Name "WP_001182130.1"; Parent "gene-C7A06_RS01935"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001182130.1"; locus_tag "C7A06_RS01935"; product "hypothetical protein"; protein_id "WP_001182130.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1803 NZ_CP027599.1 RefSeq gene 384929 385534 . + . gene_id "nbis-gene-327"; ID "nbis-gene-327"; Name "C7A06_RS01940"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01940";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1804 NZ_CP027599.1 RefSeq transcript 384929 385534 . + . gene_id "nbis-gene-327"; transcript_id "gene-C7A06_RS01940"; ID "gene-C7A06_RS01940"; Name "C7A06_RS01940"; Parent "nbis-gene-327"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01940"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1805 NZ_CP027599.1 Protein Homology exon 384929 385534 . + . gene_id "nbis-gene-327"; transcript_id "gene-C7A06_RS01940"; Dbxref "Genbank:WP_000589361.1"; ID "nbis-exon-338"; Name "WP_000589361.1"; Parent "gene-C7A06_RS01940"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000589351.1"; locus_tag "C7A06_RS01940"; product "hypothetical protein"; protein_id "WP_000589361.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1806 NZ_CP027599.1 Protein Homology CDS 384929 385534 . + 0 gene_id "nbis-gene-327"; transcript_id "gene-C7A06_RS01940"; Dbxref "Genbank:WP_000589361.1"; ID "cds-WP_000589361.1"; Name "WP_000589361.1"; Parent "gene-C7A06_RS01940"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000589351.1"; locus_tag "C7A06_RS01940"; product "hypothetical protein"; protein_id "WP_000589361.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1807 NZ_CP027599.1 RefSeq gene 385586 387091 . - . gene_id "nbis-gene-328"; ID "nbis-gene-328"; Name "glpD"; gbkey "Gene"; gene "glpD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01945";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1808 NZ_CP027599.1 RefSeq transcript 385586 387091 . - . gene_id "nbis-gene-328"; transcript_id "gene-C7A06_RS01945"; ID "gene-C7A06_RS01945"; Name "glpD"; Parent "nbis-gene-328"; gbkey "Gene"; gene "glpD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01945"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1809 NZ_CP027599.1 Protein Homology exon 385586 387091 . - . gene_id "nbis-gene-328"; transcript_id "gene-C7A06_RS01945"; Dbxref "Genbank:WP_000448139.1"; ID "nbis-exon-339"; Name "WP_000448139.1"; Ontology_term "GO:0006072" "GO:0004368" "GO:0009331"; Parent "gene-C7A06_RS01945"; gbkey "CDS"; gene "glpD"; go_component "glycerol-3-phosphate dehydrogenase complex|0009331||IEA"; go_function "glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA"; go_process "glycerol-3-phosphate metabolic process|0006072||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312296.1"; locus_tag "C7A06_RS01945"; product "glycerol-3-phosphate dehydrogenase"; protein_id "WP_000448139.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1810 NZ_CP027599.1 Protein Homology CDS 385586 387091 . - 0 gene_id "nbis-gene-328"; transcript_id "gene-C7A06_RS01945"; Dbxref "Genbank:WP_000448139.1"; ID "cds-WP_000448139.1"; Name "WP_000448139.1"; Ontology_term "GO:0006072" "GO:0004368" "GO:0009331"; Parent "gene-C7A06_RS01945"; gbkey "CDS"; gene "glpD"; go_component "glycerol-3-phosphate dehydrogenase complex|0009331||IEA"; go_function "glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA"; go_process "glycerol-3-phosphate metabolic process|0006072||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312296.1"; locus_tag "C7A06_RS01945"; product "glycerol-3-phosphate dehydrogenase"; protein_id "WP_000448139.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1811 NZ_CP027599.1 RefSeq gene 387281 387607 . + . gene_id "nbis-gene-329"; ID "nbis-gene-329"; Name "glpE"; gbkey "Gene"; gene "glpE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01950";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1812 NZ_CP027599.1 RefSeq transcript 387281 387607 . + . gene_id "nbis-gene-329"; transcript_id "gene-C7A06_RS01950"; ID "gene-C7A06_RS01950"; Name "glpE"; Parent "nbis-gene-329"; gbkey "Gene"; gene "glpE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01950"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1813 NZ_CP027599.1 Protein Homology exon 387281 387607 . + . gene_id "nbis-gene-329"; transcript_id "gene-C7A06_RS01950"; Dbxref "Genbank:WP_000362869.1"; ID "nbis-exon-340"; Name "WP_000362869.1"; Ontology_term "GO:0004792"; Parent "gene-C7A06_RS01950"; gbkey "CDS"; gene "glpE"; go_function "thiosulfate sulfurtransferase activity|0004792||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417883.1"; locus_tag "C7A06_RS01950"; product "thiosulfate sulfurtransferase GlpE"; protein_id "WP_000362869.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1814 NZ_CP027599.1 Protein Homology CDS 387281 387607 . + 0 gene_id "nbis-gene-329"; transcript_id "gene-C7A06_RS01950"; Dbxref "Genbank:WP_000362869.1"; ID "cds-WP_000362869.1"; Name "WP_000362869.1"; Ontology_term "GO:0004792"; Parent "gene-C7A06_RS01950"; gbkey "CDS"; gene "glpE"; go_function "thiosulfate sulfurtransferase activity|0004792||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417883.1"; locus_tag "C7A06_RS01950"; product "thiosulfate sulfurtransferase GlpE"; protein_id "WP_000362869.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1815 NZ_CP027599.1 RefSeq gene 387652 388482 . + . gene_id "nbis-gene-330"; ID "nbis-gene-330"; Name "glpG"; gbkey "Gene"; gene "glpG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01955";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1816 NZ_CP027599.1 RefSeq transcript 387652 388482 . + . gene_id "nbis-gene-330"; transcript_id "gene-C7A06_RS01955"; ID "gene-C7A06_RS01955"; Name "glpG"; Parent "nbis-gene-330"; gbkey "Gene"; gene "glpG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01955"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1817 NZ_CP027599.1 Protein Homology exon 387652 388482 . + . gene_id "nbis-gene-330"; transcript_id "gene-C7A06_RS01955"; Dbxref "Genbank:WP_000928731.1"; ID "nbis-exon-341"; Name "WP_000928731.1"; Ontology_term "GO:0006508" "GO:0004252" "GO:0016021"; Parent "gene-C7A06_RS01955"; gbkey "CDS"; gene "glpG"; go_component "integral component of membrane|0016021||IEA"; go_function "serine-type endopeptidase activity|0004252||IEA"; go_process "proteolysis|0006508||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026220.1"; locus_tag "C7A06_RS01955"; product "rhomboid family intramembrane serine protease GlpG"; protein_id "WP_000928731.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1818 NZ_CP027599.1 Protein Homology CDS 387652 388482 . + 0 gene_id "nbis-gene-330"; transcript_id "gene-C7A06_RS01955"; Dbxref "Genbank:WP_000928731.1"; ID "cds-WP_000928731.1"; Name "WP_000928731.1"; Ontology_term "GO:0006508" "GO:0004252" "GO:0016021"; Parent "gene-C7A06_RS01955"; gbkey "CDS"; gene "glpG"; go_component "integral component of membrane|0016021||IEA"; go_function "serine-type endopeptidase activity|0004252||IEA"; go_process "proteolysis|0006508||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026220.1"; locus_tag "C7A06_RS01955"; product "rhomboid family intramembrane serine protease GlpG"; protein_id "WP_000928731.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1819 NZ_CP027599.1 RefSeq gene 388499 389257 . + . gene_id "nbis-gene-331"; ID "nbis-gene-331"; Name "C7A06_RS01960"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01960";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1820 NZ_CP027599.1 RefSeq transcript 388499 389257 . + . gene_id "nbis-gene-331"; transcript_id "gene-C7A06_RS01960"; ID "gene-C7A06_RS01960"; Name "C7A06_RS01960"; Parent "nbis-gene-331"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01960"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1821 NZ_CP027599.1 Protein Homology exon 388499 389257 . + . gene_id "nbis-gene-331"; transcript_id "gene-C7A06_RS01960"; Dbxref "Genbank:WP_000815099.1"; ID "nbis-exon-342"; Name "WP_000815099.1"; Parent "gene-C7A06_RS01960"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1"; locus_tag "C7A06_RS01960"; product "DeoR/GlpR family transcriptional regulator"; protein_id "WP_000815099.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1822 NZ_CP027599.1 Protein Homology CDS 388499 389257 . + 0 gene_id "nbis-gene-331"; transcript_id "gene-C7A06_RS01960"; Dbxref "Genbank:WP_000815099.1"; ID "cds-WP_000815099.1"; Name "WP_000815099.1"; Parent "gene-C7A06_RS01960"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1"; locus_tag "C7A06_RS01960"; product "DeoR/GlpR family transcriptional regulator"; protein_id "WP_000815099.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1823 NZ_CP027599.1 RefSeq gene 389239 390837 . - . gene_id "nbis-gene-332"; ID "nbis-gene-332"; Name "rtcR"; gbkey "Gene"; gene "rtcR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01965";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1824 NZ_CP027599.1 RefSeq transcript 389239 390837 . - . gene_id "nbis-gene-332"; transcript_id "gene-C7A06_RS01965"; ID "gene-C7A06_RS01965"; Name "rtcR"; Parent "nbis-gene-332"; gbkey "Gene"; gene "rtcR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01965"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1825 NZ_CP027599.1 Protein Homology exon 389239 390837 . - . gene_id "nbis-gene-332"; transcript_id "gene-C7A06_RS01965"; Dbxref "Genbank:WP_001232981.1"; ID "nbis-exon-343"; Name "WP_001232981.1"; Parent "gene-C7A06_RS01965"; gbkey "CDS"; gene "rtcR"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417880.1"; locus_tag "C7A06_RS01965"; product "DNA-binding transcriptional regulator RtcR"; protein_id "WP_001232981.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1826 NZ_CP027599.1 Protein Homology CDS 389239 390837 . - 0 gene_id "nbis-gene-332"; transcript_id "gene-C7A06_RS01965"; Dbxref "Genbank:WP_001232981.1"; ID "cds-WP_001232981.1"; Name "WP_001232981.1"; Parent "gene-C7A06_RS01965"; gbkey "CDS"; gene "rtcR"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417880.1"; locus_tag "C7A06_RS01965"; product "DNA-binding transcriptional regulator RtcR"; protein_id "WP_001232981.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1827 NZ_CP027599.1 RefSeq gene 391026 392252 . + . gene_id "nbis-gene-333"; ID "nbis-gene-333"; Name "rtcB"; gbkey "Gene"; gene "rtcB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01970";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1828 NZ_CP027599.1 RefSeq transcript 391026 392252 . + . gene_id "nbis-gene-333"; transcript_id "gene-C7A06_RS01970"; ID "gene-C7A06_RS01970"; Name "rtcB"; Parent "nbis-gene-333"; gbkey "Gene"; gene "rtcB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01970"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1829 NZ_CP027599.1 Protein Homology exon 391026 392252 . + . gene_id "nbis-gene-333"; transcript_id "gene-C7A06_RS01970"; Dbxref "Genbank:WP_001105463.1"; ID "nbis-exon-344"; Name "WP_001105463.1"; Parent "gene-C7A06_RS01970"; gbkey "CDS"; gene "rtcB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709196.1"; locus_tag "C7A06_RS01970"; product "RNA-splicing ligase RtcB"; protein_id "WP_001105463.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1830 NZ_CP027599.1 Protein Homology CDS 391026 392252 . + 0 gene_id "nbis-gene-333"; transcript_id "gene-C7A06_RS01970"; Dbxref "Genbank:WP_001105463.1"; ID "cds-WP_001105463.1"; Name "WP_001105463.1"; Parent "gene-C7A06_RS01970"; gbkey "CDS"; gene "rtcB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709196.1"; locus_tag "C7A06_RS01970"; product "RNA-splicing ligase RtcB"; protein_id "WP_001105463.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1831 NZ_CP027599.1 RefSeq gene 392256 393272 . + . gene_id "nbis-gene-334"; ID "nbis-gene-334"; Name "rtcA"; gbkey "Gene"; gene "rtcA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01975";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1832 NZ_CP027599.1 RefSeq transcript 392256 393272 . + . gene_id "nbis-gene-334"; transcript_id "gene-C7A06_RS01975"; ID "gene-C7A06_RS01975"; Name "rtcA"; Parent "nbis-gene-334"; gbkey "Gene"; gene "rtcA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01975"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1833 NZ_CP027599.1 Protein Homology exon 392256 393272 . + . gene_id "nbis-gene-334"; transcript_id "gene-C7A06_RS01975"; Dbxref "Genbank:WP_001341929.1"; ID "nbis-exon-345"; Name "WP_001341929.1"; Ontology_term "GO:0006396" "GO:0003963"; Parent "gene-C7A06_RS01975"; gbkey "CDS"; gene "rtcA"; go_function "RNA-3'-phosphate cyclase activity|0003963||IEA"; go_process "RNA processing|0006396||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026219.1"; locus_tag "C7A06_RS01975"; product "RNA 3'-terminal phosphate cyclase"; protein_id "WP_001341929.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1834 NZ_CP027599.1 Protein Homology CDS 392256 393272 . + 0 gene_id "nbis-gene-334"; transcript_id "gene-C7A06_RS01975"; Dbxref "Genbank:WP_001341929.1"; ID "cds-WP_001341929.1"; Name "WP_001341929.1"; Ontology_term "GO:0006396" "GO:0003963"; Parent "gene-C7A06_RS01975"; gbkey "CDS"; gene "rtcA"; go_function "RNA-3'-phosphate cyclase activity|0003963||IEA"; go_process "RNA processing|0006396||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026219.1"; locus_tag "C7A06_RS01975"; product "RNA 3'-terminal phosphate cyclase"; protein_id "WP_001341929.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1835 NZ_CP027599.1 RefSeq gene 393315 396020 . - . gene_id "nbis-gene-335"; ID "nbis-gene-335"; Name "malT"; gbkey "Gene"; gene "malT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01980";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1836 NZ_CP027599.1 RefSeq transcript 393315 396020 . - . gene_id "nbis-gene-335"; transcript_id "gene-C7A06_RS01980"; ID "gene-C7A06_RS01980"; Name "malT"; Parent "nbis-gene-335"; gbkey "Gene"; gene "malT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01980"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1837 NZ_CP027599.1 Protein Homology exon 393315 396020 . - . gene_id "nbis-gene-335"; transcript_id "gene-C7A06_RS01980"; Dbxref "Genbank:WP_000906970.1"; ID "nbis-exon-346"; Name "WP_000906970.1"; Ontology_term "GO:0006355" "GO:0003677" "GO:0005515"; Parent "gene-C7A06_RS01980"; gbkey "CDS"; gene "malT"; go_function "DNA binding|0003677||IEA" "protein binding|0005515||IEA"; go_process "regulation of transcription, DNA-templated|0006355||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312287.1"; locus_tag "C7A06_RS01980"; product "HTH-type transcriptional regulator MalT"; protein_id "WP_000906970.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1838 NZ_CP027599.1 Protein Homology CDS 393315 396020 . - 0 gene_id "nbis-gene-335"; transcript_id "gene-C7A06_RS01980"; Dbxref "Genbank:WP_000906970.1"; ID "cds-WP_000906970.1"; Name "WP_000906970.1"; Ontology_term "GO:0006355" "GO:0003677" "GO:0005515"; Parent "gene-C7A06_RS01980"; gbkey "CDS"; gene "malT"; go_function "DNA binding|0003677||IEA" "protein binding|0005515||IEA"; go_process "regulation of transcription, DNA-templated|0006355||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312287.1"; locus_tag "C7A06_RS01980"; product "HTH-type transcriptional regulator MalT"; protein_id "WP_000906970.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1839 NZ_CP027599.1 RefSeq gene 396632 399025 . + . gene_id "nbis-gene-336"; ID "nbis-gene-336"; Name "malP"; gbkey "Gene"; gene "malP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01985";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1840 NZ_CP027599.1 RefSeq transcript 396632 399025 . + . gene_id "nbis-gene-336"; transcript_id "gene-C7A06_RS01985"; ID "gene-C7A06_RS01985"; Name "malP"; Parent "nbis-gene-336"; gbkey "Gene"; gene "malP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01985"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1841 NZ_CP027599.1 Protein Homology exon 396632 399025 . + . gene_id "nbis-gene-336"; transcript_id "gene-C7A06_RS01985"; Dbxref "Genbank:WP_000081909.1"; ID "nbis-exon-347"; Name "WP_000081909.1"; Ontology_term "GO:0005975" "GO:0008184" "GO:0030170"; Parent "gene-C7A06_RS01985"; gbkey "CDS"; gene "malP"; go_function "glycogen phosphorylase activity|0008184||IEA" "pyridoxal phosphate binding|0030170||IEA"; go_process "carbohydrate metabolic process|0005975||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026218.1"; locus_tag "C7A06_RS01985"; product "maltodextrin phosphorylase"; protein_id "WP_000081909.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1842 NZ_CP027599.1 Protein Homology CDS 396632 399025 . + 0 gene_id "nbis-gene-336"; transcript_id "gene-C7A06_RS01985"; Dbxref "Genbank:WP_000081909.1"; ID "cds-WP_000081909.1"; Name "WP_000081909.1"; Ontology_term "GO:0005975" "GO:0008184" "GO:0030170"; Parent "gene-C7A06_RS01985"; gbkey "CDS"; gene "malP"; go_function "glycogen phosphorylase activity|0008184||IEA" "pyridoxal phosphate binding|0030170||IEA"; go_process "carbohydrate metabolic process|0005975||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026218.1"; locus_tag "C7A06_RS01985"; product "maltodextrin phosphorylase"; protein_id "WP_000081909.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1843 NZ_CP027599.1 RefSeq gene 399035 401119 . + . gene_id "nbis-gene-337"; ID "nbis-gene-337"; Name "malQ"; gbkey "Gene"; gene "malQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01990";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1844 NZ_CP027599.1 RefSeq transcript 399035 401119 . + . gene_id "nbis-gene-337"; transcript_id "gene-C7A06_RS01990"; ID "gene-C7A06_RS01990"; Name "malQ"; Parent "nbis-gene-337"; gbkey "Gene"; gene "malQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01990"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1845 NZ_CP027599.1 Protein Homology exon 399035 401119 . + . gene_id "nbis-gene-337"; transcript_id "gene-C7A06_RS01990"; Dbxref "Genbank:WP_000444350.1"; ID "nbis-exon-348"; Name "WP_000444350.1"; Ontology_term "GO:0005975" "GO:0004134"; Parent "gene-C7A06_RS01990"; gbkey "CDS"; gene "malQ"; go_function "4-alpha-glucanotransferase activity|0004134||IEA"; go_process "carbohydrate metabolic process|0005975||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417875.1"; locus_tag "C7A06_RS01990"; product "4-alpha-glucanotransferase"; protein_id "WP_000444350.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1846 NZ_CP027599.1 Protein Homology CDS 399035 401119 . + 0 gene_id "nbis-gene-337"; transcript_id "gene-C7A06_RS01990"; Dbxref "Genbank:WP_000444350.1"; ID "cds-WP_000444350.1"; Name "WP_000444350.1"; Ontology_term "GO:0005975" "GO:0004134"; Parent "gene-C7A06_RS01990"; gbkey "CDS"; gene "malQ"; go_function "4-alpha-glucanotransferase activity|0004134||IEA"; go_process "carbohydrate metabolic process|0005975||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417875.1"; locus_tag "C7A06_RS01990"; product "4-alpha-glucanotransferase"; protein_id "WP_000444350.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1847 NZ_CP027599.1 RefSeq gene 401164 402480 . - . gene_id "nbis-gene-338"; ID "nbis-gene-338"; Name "gntT"; gbkey "Gene"; gene "gntT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01995";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1848 NZ_CP027599.1 RefSeq transcript 401164 402480 . - . gene_id "nbis-gene-338"; transcript_id "gene-C7A06_RS01995"; ID "gene-C7A06_RS01995"; Name "gntT"; Parent "nbis-gene-338"; gbkey "Gene"; gene "gntT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS01995"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1849 NZ_CP027599.1 Protein Homology exon 401164 402480 . - . gene_id "nbis-gene-338"; transcript_id "gene-C7A06_RS01995"; Dbxref "Genbank:WP_001131758.1"; ID "nbis-exon-349"; Name "WP_001131758.1"; Parent "gene-C7A06_RS01995"; gbkey "CDS"; gene "gntT"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312284.1"; locus_tag "C7A06_RS01995"; product "gluconate transporter"; protein_id "WP_001131758.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1850 NZ_CP027599.1 Protein Homology CDS 401164 402480 . - 0 gene_id "nbis-gene-338"; transcript_id "gene-C7A06_RS01995"; Dbxref "Genbank:WP_001131758.1"; ID "cds-WP_001131758.1"; Name "WP_001131758.1"; Parent "gene-C7A06_RS01995"; gbkey "CDS"; gene "gntT"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312284.1"; locus_tag "C7A06_RS01995"; product "gluconate transporter"; protein_id "WP_001131758.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1851 NZ_CP027599.1 RefSeq gene 402841 403416 . - . gene_id "nbis-gene-339"; ID "nbis-gene-339"; Name "nfuA"; gbkey "Gene"; gene "nfuA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02000";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1852 NZ_CP027599.1 RefSeq transcript 402841 403416 . - . gene_id "nbis-gene-339"; transcript_id "gene-C7A06_RS02000"; ID "gene-C7A06_RS02000"; Name "nfuA"; Parent "nbis-gene-339"; gbkey "Gene"; gene "nfuA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02000"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1853 NZ_CP027599.1 Protein Homology exon 402841 403416 . - . gene_id "nbis-gene-339"; transcript_id "gene-C7A06_RS02000"; Dbxref "Genbank:WP_000619389.1"; ID "nbis-exon-350"; Name "WP_000619389.1"; Ontology_term "GO:0016226" "GO:0051604" "GO:0051539"; Parent "gene-C7A06_RS02000"; gbkey "CDS"; gene "nfuA"; go_function "4 iron, 4 sulfur cluster binding|0051539||IEA"; go_process "iron-sulfur cluster assembly|0016226||IEA" "protein maturation|0051604||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1"; locus_tag "C7A06_RS02000"; product "Fe-S biogenesis protein NfuA"; protein_id "WP_000619389.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1854 NZ_CP027599.1 Protein Homology CDS 402841 403416 . - 0 gene_id "nbis-gene-339"; transcript_id "gene-C7A06_RS02000"; Dbxref "Genbank:WP_000619389.1"; ID "cds-WP_000619389.1"; Name "WP_000619389.1"; Ontology_term "GO:0016226" "GO:0051604" "GO:0051539"; Parent "gene-C7A06_RS02000"; gbkey "CDS"; gene "nfuA"; go_function "4 iron, 4 sulfur cluster binding|0051539||IEA"; go_process "iron-sulfur cluster assembly|0016226||IEA" "protein maturation|0051604||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1"; locus_tag "C7A06_RS02000"; product "Fe-S biogenesis protein NfuA"; protein_id "WP_000619389.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1855 NZ_CP027599.1 RefSeq gene 403475 404158 . - . gene_id "nbis-gene-340"; ID "nbis-gene-340"; Name "gntX"; gbkey "Gene"; gene "gntX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02005";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1856 NZ_CP027599.1 RefSeq transcript 403475 404158 . - . gene_id "nbis-gene-340"; transcript_id "gene-C7A06_RS02005"; ID "gene-C7A06_RS02005"; Name "gntX"; Parent "nbis-gene-340"; gbkey "Gene"; gene "gntX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02005"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1857 NZ_CP027599.1 Protein Homology exon 403475 404158 . - . gene_id "nbis-gene-340"; transcript_id "gene-C7A06_RS02005"; Dbxref "Genbank:WP_000958727.1"; ID "nbis-exon-351"; Name "WP_000958727.1"; Ontology_term "GO:0009116"; Parent "gene-C7A06_RS02005"; gbkey "CDS"; gene "gntX"; go_process "nucleoside metabolic process|0009116||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417872.2"; locus_tag "C7A06_RS02005"; product "DNA utilization protein GntX"; protein_id "WP_000958727.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1858 NZ_CP027599.1 Protein Homology CDS 403475 404158 . - 0 gene_id "nbis-gene-340"; transcript_id "gene-C7A06_RS02005"; Dbxref "Genbank:WP_000958727.1"; ID "cds-WP_000958727.1"; Name "WP_000958727.1"; Ontology_term "GO:0009116"; Parent "gene-C7A06_RS02005"; gbkey "CDS"; gene "gntX"; go_process "nucleoside metabolic process|0009116||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417872.2"; locus_tag "C7A06_RS02005"; product "DNA utilization protein GntX"; protein_id "WP_000958727.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1859 NZ_CP027599.1 RefSeq gene 404196 404966 . + . gene_id "nbis-gene-341"; ID "nbis-gene-341"; Name "bioH"; gbkey "Gene"; gene "bioH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02010";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1860 NZ_CP027599.1 RefSeq transcript 404196 404966 . + . gene_id "nbis-gene-341"; transcript_id "gene-C7A06_RS02010"; ID "gene-C7A06_RS02010"; Name "bioH"; Parent "nbis-gene-341"; gbkey "Gene"; gene "bioH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02010"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1861 NZ_CP027599.1 Protein Homology exon 404196 404966 . + . gene_id "nbis-gene-341"; transcript_id "gene-C7A06_RS02010"; Dbxref "Genbank:WP_001060076.1"; ID "nbis-exon-352"; Name "WP_001060076.1"; Ontology_term "GO:0052689"; Parent "gene-C7A06_RS02010"; gbkey "CDS"; gene "bioH"; go_function "carboxylic ester hydrolase activity|0052689||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417871.1"; locus_tag "C7A06_RS02010"; product "pimeloyl-ACP methyl ester esterase BioH"; protein_id "WP_001060076.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1862 NZ_CP027599.1 Protein Homology CDS 404196 404966 . + 0 gene_id "nbis-gene-341"; transcript_id "gene-C7A06_RS02010"; Dbxref "Genbank:WP_001060076.1"; ID "cds-WP_001060076.1"; Name "WP_001060076.1"; Ontology_term "GO:0052689"; Parent "gene-C7A06_RS02010"; gbkey "CDS"; gene "bioH"; go_function "carboxylic ester hydrolase activity|0052689||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417871.1"; locus_tag "C7A06_RS02010"; product "pimeloyl-ACP methyl ester esterase BioH"; protein_id "WP_001060076.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1863 NZ_CP027599.1 RefSeq gene 404995 405873 . - . gene_id "nbis-gene-342"; ID "nbis-gene-342"; Name "rpnA"; gbkey "Gene"; gene "rpnA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02015";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1864 NZ_CP027599.1 RefSeq transcript 404995 405873 . - . gene_id "nbis-gene-342"; transcript_id "gene-C7A06_RS02015"; ID "gene-C7A06_RS02015"; Name "rpnA"; Parent "nbis-gene-342"; gbkey "Gene"; gene "rpnA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02015"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1865 NZ_CP027599.1 Protein Homology exon 404995 405873 . - . gene_id "nbis-gene-342"; transcript_id "gene-C7A06_RS02015"; Dbxref "Genbank:WP_000039063.1"; ID "nbis-exon-353"; Name "WP_000039063.1"; Parent "gene-C7A06_RS02015"; gbkey "CDS"; gene "rpnA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417870.1"; locus_tag "C7A06_RS02015"; product "recombination-promoting nuclease RpnA"; protein_id "WP_000039063.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1866 NZ_CP027599.1 Protein Homology CDS 404995 405873 . - 0 gene_id "nbis-gene-342"; transcript_id "gene-C7A06_RS02015"; Dbxref "Genbank:WP_000039063.1"; ID "cds-WP_000039063.1"; Name "WP_000039063.1"; Parent "gene-C7A06_RS02015"; gbkey "CDS"; gene "rpnA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417870.1"; locus_tag "C7A06_RS02015"; product "recombination-promoting nuclease RpnA"; protein_id "WP_000039063.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1867 NZ_CP027599.1 RefSeq gene 406076 406312 . - . gene_id "nbis-gene-343"; ID "nbis-gene-343"; Name "feoC"; gbkey "Gene"; gene "feoC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02025";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1868 NZ_CP027599.1 RefSeq transcript 406076 406312 . - . gene_id "nbis-gene-343"; transcript_id "gene-C7A06_RS02025"; ID "gene-C7A06_RS02025"; Name "feoC"; Parent "nbis-gene-343"; gbkey "Gene"; gene "feoC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02025"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1869 NZ_CP027599.1 Protein Homology exon 406076 406312 . - . gene_id "nbis-gene-343"; transcript_id "gene-C7A06_RS02025"; Dbxref "Genbank:WP_000157586.1"; ID "nbis-exon-354"; Name "WP_000157586.1"; Parent "gene-C7A06_RS02025"; gbkey "CDS"; gene "feoC"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312279.1"; locus_tag "C7A06_RS02025"; product "[Fe-S]-dependent transcriptional repressor FeoC"; protein_id "WP_000157586.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1870 NZ_CP027599.1 Protein Homology CDS 406076 406312 . - 0 gene_id "nbis-gene-343"; transcript_id "gene-C7A06_RS02025"; Dbxref "Genbank:WP_000157586.1"; ID "cds-WP_000157586.1"; Name "WP_000157586.1"; Parent "gene-C7A06_RS02025"; gbkey "CDS"; gene "feoC"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312279.1"; locus_tag "C7A06_RS02025"; product "[Fe-S]-dependent transcriptional repressor FeoC"; protein_id "WP_000157586.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1871 NZ_CP027599.1 RefSeq gene 406312 408633 . - . gene_id "nbis-gene-344"; ID "nbis-gene-344"; Name "feoB"; gbkey "Gene"; gene "feoB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02030";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1872 NZ_CP027599.1 RefSeq transcript 406312 408633 . - . gene_id "nbis-gene-344"; transcript_id "gene-C7A06_RS02030"; ID "gene-C7A06_RS02030"; Name "feoB"; Parent "nbis-gene-344"; gbkey "Gene"; gene "feoB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02030"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1873 NZ_CP027599.1 Protein Homology exon 406312 408633 . - . gene_id "nbis-gene-344"; transcript_id "gene-C7A06_RS02030"; Dbxref "Genbank:WP_000737007.1"; ID "nbis-exon-355"; Name "WP_000737007.1"; Ontology_term "GO:0006826" "GO:0005525" "GO:0015093" "GO:0016021"; Parent "gene-C7A06_RS02030"; gbkey "CDS"; gene "feoB"; go_component "integral component of membrane|0016021||IEA"; go_function "GTP binding|0005525||IEA" "ferrous iron transmembrane transporter activity|0015093||IEA"; go_process "iron ion transport|0006826||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417868.1"; locus_tag "C7A06_RS02030"; product "Fe(2+) transporter permease subunit FeoB"; protein_id "WP_000737007.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1874 NZ_CP027599.1 Protein Homology CDS 406312 408633 . - 0 gene_id "nbis-gene-344"; transcript_id "gene-C7A06_RS02030"; Dbxref "Genbank:WP_000737007.1"; ID "cds-WP_000737007.1"; Name "WP_000737007.1"; Ontology_term "GO:0006826" "GO:0005525" "GO:0015093" "GO:0016021"; Parent "gene-C7A06_RS02030"; gbkey "CDS"; gene "feoB"; go_component "integral component of membrane|0016021||IEA"; go_function "GTP binding|0005525||IEA" "ferrous iron transmembrane transporter activity|0015093||IEA"; go_process "iron ion transport|0006826||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417868.1"; locus_tag "C7A06_RS02030"; product "Fe(2+) transporter permease subunit FeoB"; protein_id "WP_000737007.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1875 NZ_CP027599.1 RefSeq gene 408650 408877 . - . gene_id "nbis-gene-345"; ID "nbis-gene-345"; Name "feoA"; gbkey "Gene"; gene "feoA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02035";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1876 NZ_CP027599.1 RefSeq transcript 408650 408877 . - . gene_id "nbis-gene-345"; transcript_id "gene-C7A06_RS02035"; ID "gene-C7A06_RS02035"; Name "feoA"; Parent "nbis-gene-345"; gbkey "Gene"; gene "feoA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02035"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1877 NZ_CP027599.1 Protein Homology exon 408650 408877 . - . gene_id "nbis-gene-345"; transcript_id "gene-C7A06_RS02035"; Dbxref "Genbank:WP_001200455.1"; ID "nbis-exon-356"; Name "WP_001200455.1"; Parent "gene-C7A06_RS02035"; gbkey "CDS"; gene "feoA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312277.1"; locus_tag "C7A06_RS02035"; product "ferrous iron transporter A"; protein_id "WP_001200455.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1878 NZ_CP027599.1 Protein Homology CDS 408650 408877 . - 0 gene_id "nbis-gene-345"; transcript_id "gene-C7A06_RS02035"; Dbxref "Genbank:WP_001200455.1"; ID "cds-WP_001200455.1"; Name "WP_001200455.1"; Parent "gene-C7A06_RS02035"; gbkey "CDS"; gene "feoA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312277.1"; locus_tag "C7A06_RS02035"; product "ferrous iron transporter A"; protein_id "WP_001200455.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1879 NZ_CP027599.1 RefSeq gene 409315 411636 . - . gene_id "nbis-gene-346"; ID "nbis-gene-346"; Name "yhgF"; gbkey "Gene"; gene "yhgF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02045";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1880 NZ_CP027599.1 RefSeq transcript 409315 411636 . - . gene_id "nbis-gene-346"; transcript_id "gene-C7A06_RS02045"; ID "gene-C7A06_RS02045"; Name "yhgF"; Parent "nbis-gene-346"; gbkey "Gene"; gene "yhgF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02045"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1881 NZ_CP027599.1 Protein Homology exon 409315 411636 . - . gene_id "nbis-gene-346"; transcript_id "gene-C7A06_RS02045"; Dbxref "Genbank:WP_000980697.1"; ID "nbis-exon-357"; Name "WP_000980697.1"; Parent "gene-C7A06_RS02045"; gbkey "CDS"; gene "yhgF"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417866.4"; locus_tag "C7A06_RS02045"; product "RNA-binding transcriptional accessory protein"; protein_id "WP_000980697.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1882 NZ_CP027599.1 Protein Homology CDS 409315 411636 . - 0 gene_id "nbis-gene-346"; transcript_id "gene-C7A06_RS02045"; Dbxref "Genbank:WP_000980697.1"; ID "cds-WP_000980697.1"; Name "WP_000980697.1"; Parent "gene-C7A06_RS02045"; gbkey "CDS"; gene "yhgF"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417866.4"; locus_tag "C7A06_RS02045"; product "RNA-binding transcriptional accessory protein"; protein_id "WP_000980697.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1883 NZ_CP027599.1 RefSeq gene 411733 412209 . - . gene_id "nbis-gene-347"; ID "nbis-gene-347"; Name "greB"; gbkey "Gene"; gene "greB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02050";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1884 NZ_CP027599.1 RefSeq transcript 411733 412209 . - . gene_id "nbis-gene-347"; transcript_id "gene-C7A06_RS02050"; ID "gene-C7A06_RS02050"; Name "greB"; Parent "nbis-gene-347"; gbkey "Gene"; gene "greB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02050"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1885 NZ_CP027599.1 Protein Homology exon 411733 412209 . - . gene_id "nbis-gene-347"; transcript_id "gene-C7A06_RS02050"; Dbxref "Genbank:WP_000856744.1"; ID "nbis-exon-358"; Name "WP_000856744.1"; Ontology_term "GO:0006354" "GO:0003711"; Parent "gene-C7A06_RS02050"; gbkey "CDS"; gene "greB"; go_function "transcription elongation regulator activity|0003711||IEA"; go_process "DNA-templated transcription, elongation|0006354||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312275.2"; locus_tag "C7A06_RS02050"; product "transcription elongation factor GreB"; protein_id "WP_000856744.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1886 NZ_CP027599.1 Protein Homology CDS 411733 412209 . - 0 gene_id "nbis-gene-347"; transcript_id "gene-C7A06_RS02050"; Dbxref "Genbank:WP_000856744.1"; ID "cds-WP_000856744.1"; Name "WP_000856744.1"; Ontology_term "GO:0006354" "GO:0003711"; Parent "gene-C7A06_RS02050"; gbkey "CDS"; gene "greB"; go_function "transcription elongation regulator activity|0003711||IEA"; go_process "DNA-templated transcription, elongation|0006354||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312275.2"; locus_tag "C7A06_RS02050"; product "transcription elongation factor GreB"; protein_id "WP_000856744.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1887 NZ_CP027599.1 RefSeq gene 412437 413156 . + . gene_id "nbis-gene-348"; ID "nbis-gene-348"; Name "ompR"; gbkey "Gene"; gene "ompR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02060";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1888 NZ_CP027599.1 RefSeq transcript 412437 413156 . + . gene_id "nbis-gene-348"; transcript_id "gene-C7A06_RS02060"; ID "gene-C7A06_RS02060"; Name "ompR"; Parent "nbis-gene-348"; gbkey "Gene"; gene "ompR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02060"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1889 NZ_CP027599.1 Protein Homology exon 412437 413156 . + . gene_id "nbis-gene-348"; transcript_id "gene-C7A06_RS02060"; Dbxref "Genbank:WP_001157751.1"; ID "nbis-exon-359"; Name "WP_001157751.1"; Ontology_term "GO:0000160" "GO:0006355" "GO:0003677"; Parent "gene-C7A06_RS02060"; gbkey "CDS"; gene "ompR"; go_function "DNA binding|0003677||IEA"; go_process "phosphorelay signal transduction system|0000160||IEA" "regulation of transcription, DNA-templated|0006355||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_014646135.1"; locus_tag "C7A06_RS02060"; product "two-component system response regulator OmpR"; protein_id "WP_001157751.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1890 NZ_CP027599.1 Protein Homology CDS 412437 413156 . + 0 gene_id "nbis-gene-348"; transcript_id "gene-C7A06_RS02060"; Dbxref "Genbank:WP_001157751.1"; ID "cds-WP_001157751.1"; Name "WP_001157751.1"; Ontology_term "GO:0000160" "GO:0006355" "GO:0003677"; Parent "gene-C7A06_RS02060"; gbkey "CDS"; gene "ompR"; go_function "DNA binding|0003677||IEA"; go_process "phosphorelay signal transduction system|0000160||IEA" "regulation of transcription, DNA-templated|0006355||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_014646135.1"; locus_tag "C7A06_RS02060"; product "two-component system response regulator OmpR"; protein_id "WP_001157751.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1891 NZ_CP027599.1 RefSeq gene 413153 414505 . + . gene_id "nbis-gene-349"; ID "nbis-gene-349"; Name "envZ"; gbkey "Gene"; gene "envZ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02065";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1892 NZ_CP027599.1 RefSeq transcript 413153 414505 . + . gene_id "nbis-gene-349"; transcript_id "gene-C7A06_RS02065"; ID "gene-C7A06_RS02065"; Name "envZ"; Parent "nbis-gene-349"; gbkey "Gene"; gene "envZ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02065"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1893 NZ_CP027599.1 Protein Homology exon 413153 414505 . + . gene_id "nbis-gene-349"; transcript_id "gene-C7A06_RS02065"; Dbxref "Genbank:WP_001253689.1"; ID "nbis-exon-360"; Name "WP_001253689.1"; Ontology_term "GO:0007165" "GO:0016310" "GO:0000155" "GO:0016021"; Parent "gene-C7A06_RS02065"; gbkey "CDS"; gene "envZ"; go_component "integral component of membrane|0016021||IEA"; go_function "phosphorelay sensor kinase activity|0000155||IEA"; go_process "signal transduction|0007165||IEA" "phosphorylation|0016310||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417863.1"; locus_tag "C7A06_RS02065"; product "two-component system sensor histidine kinase EnvZ"; protein_id "WP_001253689.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1894 NZ_CP027599.1 Protein Homology CDS 413153 414505 . + 0 gene_id "nbis-gene-349"; transcript_id "gene-C7A06_RS02065"; Dbxref "Genbank:WP_001253689.1"; ID "cds-WP_001253689.1"; Name "WP_001253689.1"; Ontology_term "GO:0007165" "GO:0016310" "GO:0000155" "GO:0016021"; Parent "gene-C7A06_RS02065"; gbkey "CDS"; gene "envZ"; go_component "integral component of membrane|0016021||IEA"; go_function "phosphorelay sensor kinase activity|0000155||IEA"; go_process "signal transduction|0007165||IEA" "phosphorylation|0016310||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417863.1"; locus_tag "C7A06_RS02065"; product "two-component system sensor histidine kinase EnvZ"; protein_id "WP_001253689.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1895 NZ_CP027599.1 RefSeq gene 414581 416203 . - . gene_id "nbis-gene-350"; ID "nbis-gene-350"; Name "pckA"; gbkey "Gene"; gene "pckA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02070";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1896 NZ_CP027599.1 RefSeq transcript 414581 416203 . - . gene_id "nbis-gene-350"; transcript_id "gene-C7A06_RS02070"; ID "gene-C7A06_RS02070"; Name "pckA"; Parent "nbis-gene-350"; gbkey "Gene"; gene "pckA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02070"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1897 NZ_CP027599.1 Protein Homology exon 414581 416203 . - . gene_id "nbis-gene-350"; transcript_id "gene-C7A06_RS02070"; Dbxref "Genbank:WP_001448445.1"; ID "nbis-exon-361"; Name "WP_001448445.1"; Ontology_term "GO:0006094" "GO:0004612"; Parent "gene-C7A06_RS02070"; gbkey "CDS"; gene "pckA"; go_function "phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA"; go_process "gluconeogenesis|0006094||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417862.1"; locus_tag "C7A06_RS02070"; product "phosphoenolpyruvate carboxykinase (ATP)"; protein_id "WP_001448445.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1898 NZ_CP027599.1 Protein Homology CDS 414581 416203 . - 0 gene_id "nbis-gene-350"; transcript_id "gene-C7A06_RS02070"; Dbxref "Genbank:WP_001448445.1"; ID "cds-WP_001448445.1"; Name "WP_001448445.1"; Ontology_term "GO:0006094" "GO:0004612"; Parent "gene-C7A06_RS02070"; gbkey "CDS"; gene "pckA"; go_function "phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA"; go_process "gluconeogenesis|0006094||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417862.1"; locus_tag "C7A06_RS02070"; product "phosphoenolpyruvate carboxykinase (ATP)"; protein_id "WP_001448445.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1899 NZ_CP027599.1 RefSeq gene 416582 418306 . + . gene_id "nbis-gene-351"; ID "nbis-gene-351"; Name "yhgE"; gbkey "Gene"; gene "yhgE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02080";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1900 NZ_CP027599.1 RefSeq transcript 416582 418306 . + . gene_id "nbis-gene-351"; transcript_id "gene-C7A06_RS02080"; ID "gene-C7A06_RS02080"; Name "yhgE"; Parent "nbis-gene-351"; gbkey "Gene"; gene "yhgE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02080"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1901 NZ_CP027599.1 Protein Homology exon 416582 418306 . + . gene_id "nbis-gene-351"; transcript_id "gene-C7A06_RS02080"; Dbxref "Genbank:WP_000370827.1"; ID "nbis-exon-362"; Name "WP_000370827.1"; Parent "gene-C7A06_RS02080"; gbkey "CDS"; gene "yhgE"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709174.1"; locus_tag "C7A06_RS02080"; product "DUF4153 domain-containing protein"; protein_id "WP_000370827.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1902 NZ_CP027599.1 Protein Homology CDS 416582 418306 . + 0 gene_id "nbis-gene-351"; transcript_id "gene-C7A06_RS02080"; Dbxref "Genbank:WP_000370827.1"; ID "cds-WP_000370827.1"; Name "WP_000370827.1"; Parent "gene-C7A06_RS02080"; gbkey "CDS"; gene "yhgE"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709174.1"; locus_tag "C7A06_RS02080"; product "DUF4153 domain-containing protein"; protein_id "WP_000370827.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1903 NZ_CP027599.1 RefSeq gene 418441 419319 . - . gene_id "nbis-gene-352"; ID "nbis-gene-352"; Name "hslO"; gbkey "Gene"; gene "hslO"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02085";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1904 NZ_CP027599.1 RefSeq transcript 418441 419319 . - . gene_id "nbis-gene-352"; transcript_id "gene-C7A06_RS02085"; ID "gene-C7A06_RS02085"; Name "hslO"; Parent "nbis-gene-352"; gbkey "Gene"; gene "hslO"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02085"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1905 NZ_CP027599.1 Protein Homology exon 418441 419319 . - . gene_id "nbis-gene-352"; transcript_id "gene-C7A06_RS02085"; Dbxref "Genbank:WP_001135575.1"; ID "nbis-exon-363"; Name "WP_001135575.1"; Ontology_term "GO:0006457" "GO:0051082"; Parent "gene-C7A06_RS02085"; gbkey "CDS"; gene "hslO"; go_function "unfolded protein binding|0051082||IEA"; go_process "protein folding|0006457||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417860.2"; locus_tag "C7A06_RS02085"; product "Hsp33 family molecular chaperone HslO"; protein_id "WP_001135575.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1906 NZ_CP027599.1 Protein Homology CDS 418441 419319 . - 0 gene_id "nbis-gene-352"; transcript_id "gene-C7A06_RS02085"; Dbxref "Genbank:WP_001135575.1"; ID "cds-WP_001135575.1"; Name "WP_001135575.1"; Ontology_term "GO:0006457" "GO:0051082"; Parent "gene-C7A06_RS02085"; gbkey "CDS"; gene "hslO"; go_function "unfolded protein binding|0051082||IEA"; go_process "protein folding|0006457||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417860.2"; locus_tag "C7A06_RS02085"; product "Hsp33 family molecular chaperone HslO"; protein_id "WP_001135575.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1907 NZ_CP027599.1 RefSeq gene 419344 419745 . - . gene_id "nbis-gene-353"; ID "nbis-gene-353"; Name "hslR"; gbkey "Gene"; gene "hslR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02090";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1908 NZ_CP027599.1 RefSeq transcript 419344 419745 . - . gene_id "nbis-gene-353"; transcript_id "gene-C7A06_RS02090"; ID "gene-C7A06_RS02090"; Name "hslR"; Parent "nbis-gene-353"; gbkey "Gene"; gene "hslR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02090"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1909 NZ_CP027599.1 Protein Homology exon 419344 419745 . - . gene_id "nbis-gene-353"; transcript_id "gene-C7A06_RS02090"; Dbxref "Genbank:WP_000660485.1"; ID "nbis-exon-364"; Name "WP_000660485.1"; Parent "gene-C7A06_RS02090"; gbkey "CDS"; gene "hslR"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709172.1"; locus_tag "C7A06_RS02090"; product "ribosome-associated heat shock protein Hsp15"; protein_id "WP_000660485.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1910 NZ_CP027599.1 Protein Homology CDS 419344 419745 . - 0 gene_id "nbis-gene-353"; transcript_id "gene-C7A06_RS02090"; Dbxref "Genbank:WP_000660485.1"; ID "cds-WP_000660485.1"; Name "WP_000660485.1"; Parent "gene-C7A06_RS02090"; gbkey "CDS"; gene "hslR"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709172.1"; locus_tag "C7A06_RS02090"; product "ribosome-associated heat shock protein Hsp15"; protein_id "WP_000660485.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1911 NZ_CP027599.1 RefSeq gene 419756 420424 . - . gene_id "nbis-gene-354"; ID "nbis-gene-354"; Name "yrfG"; gbkey "Gene"; gene "yrfG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02095";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1912 NZ_CP027599.1 RefSeq transcript 419756 420424 . - . gene_id "nbis-gene-354"; transcript_id "gene-C7A06_RS02095"; ID "gene-C7A06_RS02095"; Name "yrfG"; Parent "nbis-gene-354"; gbkey "Gene"; gene "yrfG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02095"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1913 NZ_CP027599.1 Protein Homology exon 419756 420424 . - . gene_id "nbis-gene-354"; transcript_id "gene-C7A06_RS02095"; Dbxref "Genbank:WP_001295168.1"; ID "nbis-exon-365"; Name "WP_001295168.1"; Parent "gene-C7A06_RS02095"; gbkey "CDS"; gene "yrfG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312268.2"; locus_tag "C7A06_RS02095"; product "GMP/IMP nucleotidase"; protein_id "WP_001295168.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1914 NZ_CP027599.1 Protein Homology CDS 419756 420424 . - 0 gene_id "nbis-gene-354"; transcript_id "gene-C7A06_RS02095"; Dbxref "Genbank:WP_001295168.1"; ID "cds-WP_001295168.1"; Name "WP_001295168.1"; Parent "gene-C7A06_RS02095"; gbkey "CDS"; gene "yrfG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312268.2"; locus_tag "C7A06_RS02095"; product "GMP/IMP nucleotidase"; protein_id "WP_001295168.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1915 NZ_CP027599.1 RefSeq gene 420489 422624 . - . gene_id "nbis-gene-355"; ID "nbis-gene-355"; Name "igaA"; gbkey "Gene"; gene "igaA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02100";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1916 NZ_CP027599.1 RefSeq transcript 420489 422624 . - . gene_id "nbis-gene-355"; transcript_id "gene-C7A06_RS02100"; ID "gene-C7A06_RS02100"; Name "igaA"; Parent "nbis-gene-355"; gbkey "Gene"; gene "igaA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02100"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1917 NZ_CP027599.1 Protein Homology exon 420489 422624 . - . gene_id "nbis-gene-355"; transcript_id "gene-C7A06_RS02100"; Dbxref "Genbank:WP_000104553.1"; ID "nbis-exon-366"; Name "WP_000104553.1"; Parent "gene-C7A06_RS02100"; gbkey "CDS"; gene "igaA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417857.1"; locus_tag "C7A06_RS02100"; product "intracellular growth attenuator protein IgaA"; protein_id "WP_000104553.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1918 NZ_CP027599.1 Protein Homology CDS 420489 422624 . - 0 gene_id "nbis-gene-355"; transcript_id "gene-C7A06_RS02100"; Dbxref "Genbank:WP_000104553.1"; ID "cds-WP_000104553.1"; Name "WP_000104553.1"; Parent "gene-C7A06_RS02100"; gbkey "CDS"; gene "igaA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417857.1"; locus_tag "C7A06_RS02100"; product "intracellular growth attenuator protein IgaA"; protein_id "WP_000104553.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1919 NZ_CP027599.1 RefSeq gene 422944 423504 . + . gene_id "nbis-gene-356"; ID "nbis-gene-356"; Name "nudE"; gbkey "Gene"; gene "nudE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02105";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1920 NZ_CP027599.1 RefSeq transcript 422944 423504 . + . gene_id "nbis-gene-356"; transcript_id "gene-C7A06_RS02105"; ID "gene-C7A06_RS02105"; Name "nudE"; Parent "nbis-gene-356"; gbkey "Gene"; gene "nudE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02105"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1921 NZ_CP027599.1 Protein Homology exon 422944 423504 . + . gene_id "nbis-gene-356"; transcript_id "gene-C7A06_RS02105"; Dbxref "Genbank:WP_000045744.1"; ID "nbis-exon-367"; Name "WP_000045744.1"; Ontology_term "GO:0016787"; Parent "gene-C7A06_RS02105"; gbkey "CDS"; gene "nudE"; go_function "hydrolase activity|0016787||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417856.1"; locus_tag "C7A06_RS02105"; product "ADP compounds hydrolase NudE"; protein_id "WP_000045744.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1922 NZ_CP027599.1 Protein Homology CDS 422944 423504 . + 0 gene_id "nbis-gene-356"; transcript_id "gene-C7A06_RS02105"; Dbxref "Genbank:WP_000045744.1"; ID "cds-WP_000045744.1"; Name "WP_000045744.1"; Ontology_term "GO:0016787"; Parent "gene-C7A06_RS02105"; gbkey "CDS"; gene "nudE"; go_function "hydrolase activity|0016787||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417856.1"; locus_tag "C7A06_RS02105"; product "ADP compounds hydrolase NudE"; protein_id "WP_000045744.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1923 NZ_CP027599.1 RefSeq gene 423670 426222 . - . gene_id "nbis-gene-357"; ID "nbis-gene-357"; Name "mrcA"; gbkey "Gene"; gene "mrcA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02110";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1924 NZ_CP027599.1 RefSeq transcript 423670 426222 . - . gene_id "nbis-gene-357"; transcript_id "gene-C7A06_RS02110"; ID "gene-C7A06_RS02110"; Name "mrcA"; Parent "nbis-gene-357"; gbkey "Gene"; gene "mrcA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02110"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1925 NZ_CP027599.1 Protein Homology exon 423670 426222 . - . gene_id "nbis-gene-357"; transcript_id "gene-C7A06_RS02110"; Dbxref "Genbank:WP_000673804.1"; ID "nbis-exon-368"; Name "WP_000673804.1"; Ontology_term "GO:0008658"; Parent "gene-C7A06_RS02110"; gbkey "CDS"; gene "mrcA"; go_function "penicillin binding|0008658||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417855.4"; locus_tag "C7A06_RS02110"; product "peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA"; protein_id "WP_000673804.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1926 NZ_CP027599.1 Protein Homology CDS 423670 426222 . - 0 gene_id "nbis-gene-357"; transcript_id "gene-C7A06_RS02110"; Dbxref "Genbank:WP_000673804.1"; ID "cds-WP_000673804.1"; Name "WP_000673804.1"; Ontology_term "GO:0008658"; Parent "gene-C7A06_RS02110"; gbkey "CDS"; gene "mrcA"; go_function "penicillin binding|0008658||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417855.4"; locus_tag "C7A06_RS02110"; product "peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA"; protein_id "WP_000673804.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1927 NZ_CP027599.1 RefSeq gene 426342 427121 . + . gene_id "nbis-gene-358"; ID "nbis-gene-358"; Name "hofM"; gbkey "Gene"; gene "hofM"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02115";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1928 NZ_CP027599.1 RefSeq transcript 426342 427121 . + . gene_id "nbis-gene-358"; transcript_id "gene-C7A06_RS02115"; ID "gene-C7A06_RS02115"; Name "hofM"; Parent "nbis-gene-358"; gbkey "Gene"; gene "hofM"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02115"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1929 NZ_CP027599.1 Protein Homology exon 426342 427121 . + . gene_id "nbis-gene-358"; transcript_id "gene-C7A06_RS02115"; Dbxref "Genbank:WP_001341921.1"; ID "nbis-exon-369"; Name "WP_001341921.1"; Parent "gene-C7A06_RS02115"; gbkey "CDS"; gene "hofM"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417854.4"; locus_tag "C7A06_RS02115"; product "DNA utilization protein HofM"; protein_id "WP_001341921.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1930 NZ_CP027599.1 Protein Homology CDS 426342 427121 . + 0 gene_id "nbis-gene-358"; transcript_id "gene-C7A06_RS02115"; Dbxref "Genbank:WP_001341921.1"; ID "cds-WP_001341921.1"; Name "WP_001341921.1"; Parent "gene-C7A06_RS02115"; gbkey "CDS"; gene "hofM"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417854.4"; locus_tag "C7A06_RS02115"; product "DNA utilization protein HofM"; protein_id "WP_001341921.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1931 NZ_CP027599.1 RefSeq gene 427121 427660 . + . gene_id "nbis-gene-359"; ID "nbis-gene-359"; Name "hofN"; gbkey "Gene"; gene "hofN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02120";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1932 NZ_CP027599.1 RefSeq transcript 427121 427660 . + . gene_id "nbis-gene-359"; transcript_id "gene-C7A06_RS02120"; ID "gene-C7A06_RS02120"; Name "hofN"; Parent "nbis-gene-359"; gbkey "Gene"; gene "hofN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02120"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1933 NZ_CP027599.1 Protein Homology exon 427121 427660 . + . gene_id "nbis-gene-359"; transcript_id "gene-C7A06_RS02120"; Dbxref "Genbank:WP_001069315.1"; ID "nbis-exon-370"; Name "WP_001069315.1"; Parent "gene-C7A06_RS02120"; gbkey "CDS"; gene "hofN"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417853.1"; locus_tag "C7A06_RS02120"; product "DNA utilization protein HofN"; protein_id "WP_001069315.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1934 NZ_CP027599.1 Protein Homology CDS 427121 427660 . + 0 gene_id "nbis-gene-359"; transcript_id "gene-C7A06_RS02120"; Dbxref "Genbank:WP_001069315.1"; ID "cds-WP_001069315.1"; Name "WP_001069315.1"; Parent "gene-C7A06_RS02120"; gbkey "CDS"; gene "hofN"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417853.1"; locus_tag "C7A06_RS02120"; product "DNA utilization protein HofN"; protein_id "WP_001069315.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1935 NZ_CP027599.1 RefSeq gene 427644 428084 . + . gene_id "nbis-gene-360"; ID "nbis-gene-360"; Name "hofO"; gbkey "Gene"; gene "hofO"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02125";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1936 NZ_CP027599.1 RefSeq transcript 427644 428084 . + . gene_id "nbis-gene-360"; transcript_id "gene-C7A06_RS02125"; ID "gene-C7A06_RS02125"; Name "hofO"; Parent "nbis-gene-360"; gbkey "Gene"; gene "hofO"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02125"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1937 NZ_CP027599.1 Protein Homology exon 427644 428084 . + . gene_id "nbis-gene-360"; transcript_id "gene-C7A06_RS02125"; Dbxref "Genbank:WP_001055754.1"; ID "nbis-exon-371"; Name "WP_001055754.1"; Parent "gene-C7A06_RS02125"; gbkey "CDS"; gene "hofO"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312262.1"; locus_tag "C7A06_RS02125"; product "DNA utilization protein HofO"; protein_id "WP_001055754.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1938 NZ_CP027599.1 Protein Homology CDS 427644 428084 . + 0 gene_id "nbis-gene-360"; transcript_id "gene-C7A06_RS02125"; Dbxref "Genbank:WP_001055754.1"; ID "cds-WP_001055754.1"; Name "WP_001055754.1"; Parent "gene-C7A06_RS02125"; gbkey "CDS"; gene "hofO"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312262.1"; locus_tag "C7A06_RS02125"; product "DNA utilization protein HofO"; protein_id "WP_001055754.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1939 NZ_CP027599.1 RefSeq gene 428074 428478 . + . gene_id "nbis-gene-361"; ID "nbis-gene-361"; Name "hofP"; gbkey "Gene"; gene "hofP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02130";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1940 NZ_CP027599.1 RefSeq transcript 428074 428478 . + . gene_id "nbis-gene-361"; transcript_id "gene-C7A06_RS02130"; ID "gene-C7A06_RS02130"; Name "hofP"; Parent "nbis-gene-361"; gbkey "Gene"; gene "hofP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02130"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1941 NZ_CP027599.1 Protein Homology exon 428074 428478 . + . gene_id "nbis-gene-361"; transcript_id "gene-C7A06_RS02130"; Dbxref "Genbank:WP_001300917.1"; ID "nbis-exon-372"; Name "WP_001300917.1"; Parent "gene-C7A06_RS02130"; gbkey "CDS"; gene "hofP"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417851.4"; locus_tag "C7A06_RS02130"; product "DNA utilization protein HofP"; protein_id "WP_001300917.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1942 NZ_CP027599.1 Protein Homology CDS 428074 428478 . + 0 gene_id "nbis-gene-361"; transcript_id "gene-C7A06_RS02130"; Dbxref "Genbank:WP_001300917.1"; ID "cds-WP_001300917.1"; Name "WP_001300917.1"; Parent "gene-C7A06_RS02130"; gbkey "CDS"; gene "hofP"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417851.4"; locus_tag "C7A06_RS02130"; product "DNA utilization protein HofP"; protein_id "WP_001300917.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1943 NZ_CP027599.1 RefSeq gene 428390 429628 . + . gene_id "nbis-gene-362"; ID "nbis-gene-362"; Name "hofQ"; gbkey "Gene"; gene "hofQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02135";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1944 NZ_CP027599.1 RefSeq transcript 428390 429628 . + . gene_id "nbis-gene-362"; transcript_id "gene-C7A06_RS02135"; ID "gene-C7A06_RS02135"; Name "hofQ"; Parent "nbis-gene-362"; gbkey "Gene"; gene "hofQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02135"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1945 NZ_CP027599.1 Protein Homology exon 428390 429628 . + . gene_id "nbis-gene-362"; transcript_id "gene-C7A06_RS02135"; Dbxref "Genbank:WP_000815968.1"; ID "nbis-exon-373"; Name "WP_000815968.1"; Ontology_term "GO:0009306" "GO:0019867"; Parent "gene-C7A06_RS02135"; gbkey "CDS"; gene "hofQ"; go_component "outer membrane|0019867||IEA"; go_process "protein secretion|0009306||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417850.1"; locus_tag "C7A06_RS02135"; product "DNA uptake porin HofQ"; protein_id "WP_000815968.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1946 NZ_CP027599.1 Protein Homology CDS 428390 429628 . + 0 gene_id "nbis-gene-362"; transcript_id "gene-C7A06_RS02135"; Dbxref "Genbank:WP_000815968.1"; ID "cds-WP_000815968.1"; Name "WP_000815968.1"; Ontology_term "GO:0009306" "GO:0019867"; Parent "gene-C7A06_RS02135"; gbkey "CDS"; gene "hofQ"; go_component "outer membrane|0019867||IEA"; go_process "protein secretion|0009306||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417850.1"; locus_tag "C7A06_RS02135"; product "DNA uptake porin HofQ"; protein_id "WP_000815968.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1947 NZ_CP027599.1 RefSeq gene 430029 430550 . + . gene_id "nbis-gene-363"; ID "nbis-gene-363"; Name "aroK"; gbkey "Gene"; gene "aroK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02145";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1948 NZ_CP027599.1 RefSeq transcript 430029 430550 . + . gene_id "nbis-gene-363"; transcript_id "gene-C7A06_RS02145"; ID "gene-C7A06_RS02145"; Name "aroK"; Parent "nbis-gene-363"; gbkey "Gene"; gene "aroK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02145"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1949 NZ_CP027599.1 Protein Homology exon 430029 430550 . + . gene_id "nbis-gene-363"; transcript_id "gene-C7A06_RS02145"; Dbxref "Genbank:WP_000818618.1"; ID "nbis-exon-374"; Name "WP_000818618.1"; Parent "gene-C7A06_RS02145"; gbkey "CDS"; gene "aroK"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1"; locus_tag "C7A06_RS02145"; product "shikimate kinase AroK"; protein_id "WP_000818618.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1950 NZ_CP027599.1 Protein Homology CDS 430029 430550 . + 0 gene_id "nbis-gene-363"; transcript_id "gene-C7A06_RS02145"; Dbxref "Genbank:WP_000818618.1"; ID "cds-WP_000818618.1"; Name "WP_000818618.1"; Parent "gene-C7A06_RS02145"; gbkey "CDS"; gene "aroK"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1"; locus_tag "C7A06_RS02145"; product "shikimate kinase AroK"; protein_id "WP_000818618.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1951 NZ_CP027599.1 RefSeq gene 430607 431695 . + . gene_id "nbis-gene-364"; ID "nbis-gene-364"; Name "aroB"; gbkey "Gene"; gene "aroB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02150";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1952 NZ_CP027599.1 RefSeq transcript 430607 431695 . + . gene_id "nbis-gene-364"; transcript_id "gene-C7A06_RS02150"; ID "gene-C7A06_RS02150"; Name "aroB"; Parent "nbis-gene-364"; gbkey "Gene"; gene "aroB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02150"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1953 NZ_CP027599.1 Protein Homology exon 430607 431695 . + . gene_id "nbis-gene-364"; transcript_id "gene-C7A06_RS02150"; Dbxref "Genbank:WP_000439847.1"; ID "nbis-exon-375"; Name "WP_000439847.1"; Ontology_term "GO:0009423" "GO:0003856"; Parent "gene-C7A06_RS02150"; gbkey "CDS"; gene "aroB"; go_function "3-dehydroquinate synthase activity|0003856||IEA"; go_process "chorismate biosynthetic process|0009423||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417848.1"; locus_tag "C7A06_RS02150"; product "3-dehydroquinate synthase"; protein_id "WP_000439847.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1954 NZ_CP027599.1 Protein Homology CDS 430607 431695 . + 0 gene_id "nbis-gene-364"; transcript_id "gene-C7A06_RS02150"; Dbxref "Genbank:WP_000439847.1"; ID "cds-WP_000439847.1"; Name "WP_000439847.1"; Ontology_term "GO:0009423" "GO:0003856"; Parent "gene-C7A06_RS02150"; gbkey "CDS"; gene "aroB"; go_function "3-dehydroquinate synthase activity|0003856||IEA"; go_process "chorismate biosynthetic process|0009423||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417848.1"; locus_tag "C7A06_RS02150"; product "3-dehydroquinate synthase"; protein_id "WP_000439847.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1955 NZ_CP027599.1 RefSeq gene 431787 433073 . + . gene_id "nbis-gene-365"; ID "nbis-gene-365"; Name "damX"; gbkey "Gene"; gene "damX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02155";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1956 NZ_CP027599.1 RefSeq transcript 431787 433073 . + . gene_id "nbis-gene-365"; transcript_id "gene-C7A06_RS02155"; ID "gene-C7A06_RS02155"; Name "damX"; Parent "nbis-gene-365"; gbkey "Gene"; gene "damX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02155"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1957 NZ_CP027599.1 Protein Homology exon 431787 433073 . + . gene_id "nbis-gene-365"; transcript_id "gene-C7A06_RS02155"; Dbxref "Genbank:WP_000343193.1"; ID "nbis-exon-376"; Name "WP_000343193.1"; Ontology_term "GO:0032506" "GO:0042834"; Parent "gene-C7A06_RS02155"; gbkey "CDS"; gene "damX"; go_function "peptidoglycan binding|0042834||IEA"; go_process "cytokinetic process|0032506||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312257.1"; locus_tag "C7A06_RS02155"; product "cell division protein DamX"; protein_id "WP_000343193.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1958 NZ_CP027599.1 Protein Homology CDS 431787 433073 . + 0 gene_id "nbis-gene-365"; transcript_id "gene-C7A06_RS02155"; Dbxref "Genbank:WP_000343193.1"; ID "cds-WP_000343193.1"; Name "WP_000343193.1"; Ontology_term "GO:0032506" "GO:0042834"; Parent "gene-C7A06_RS02155"; gbkey "CDS"; gene "damX"; go_function "peptidoglycan binding|0042834||IEA"; go_process "cytokinetic process|0032506||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312257.1"; locus_tag "C7A06_RS02155"; product "cell division protein DamX"; protein_id "WP_000343193.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1959 NZ_CP027599.1 RefSeq gene 433180 434016 . + . gene_id "nbis-gene-366"; ID "nbis-gene-366"; Name "dam"; gbkey "Gene"; gene "dam"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02160";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1960 NZ_CP027599.1 RefSeq transcript 433180 434016 . + . gene_id "nbis-gene-366"; transcript_id "gene-C7A06_RS02160"; ID "gene-C7A06_RS02160"; Name "dam"; Parent "nbis-gene-366"; gbkey "Gene"; gene "dam"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02160"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1961 NZ_CP027599.1 Protein Homology exon 433180 434016 . + . gene_id "nbis-gene-366"; transcript_id "gene-C7A06_RS02160"; Dbxref "Genbank:WP_000742143.1"; ID "nbis-exon-377"; Name "WP_000742143.1"; Ontology_term "GO:0032775" "GO:0003676" "GO:0009007"; Parent "gene-C7A06_RS02160"; gbkey "CDS"; gene "dam"; go_function "nucleic acid binding|0003676||IEA" "site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA"; go_process "DNA methylation on adenine|0032775||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312256.1"; locus_tag "C7A06_RS02160"; product "adenine-specific DNA-methyltransferase"; protein_id "WP_000742143.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1962 NZ_CP027599.1 Protein Homology CDS 433180 434016 . + 0 gene_id "nbis-gene-366"; transcript_id "gene-C7A06_RS02160"; Dbxref "Genbank:WP_000742143.1"; ID "cds-WP_000742143.1"; Name "WP_000742143.1"; Ontology_term "GO:0032775" "GO:0003676" "GO:0009007"; Parent "gene-C7A06_RS02160"; gbkey "CDS"; gene "dam"; go_function "nucleic acid binding|0003676||IEA" "site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA"; go_process "DNA methylation on adenine|0032775||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312256.1"; locus_tag "C7A06_RS02160"; product "adenine-specific DNA-methyltransferase"; protein_id "WP_000742143.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1963 NZ_CP027599.1 RefSeq gene 434034 434711 . + . gene_id "nbis-gene-367"; ID "nbis-gene-367"; Name "rpe"; gbkey "Gene"; gene "rpe"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02165";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1964 NZ_CP027599.1 RefSeq transcript 434034 434711 . + . gene_id "nbis-gene-367"; transcript_id "gene-C7A06_RS02165"; ID "gene-C7A06_RS02165"; Name "rpe"; Parent "nbis-gene-367"; gbkey "Gene"; gene "rpe"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02165"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1965 NZ_CP027599.1 Protein Homology exon 434034 434711 . + . gene_id "nbis-gene-367"; transcript_id "gene-C7A06_RS02165"; Dbxref "Genbank:WP_000816280.1"; ID "nbis-exon-378"; Name "WP_000816280.1"; Ontology_term "GO:0006098" "GO:0004750"; Parent "gene-C7A06_RS02165"; gbkey "CDS"; gene "rpe"; go_function "D-ribulose-phosphate 3-epimerase activity|0004750||IEA"; go_process "pentose-phosphate shunt|0006098||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312255.1"; locus_tag "C7A06_RS02165"; product "ribulose-phosphate 3-epimerase"; protein_id "WP_000816280.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1966 NZ_CP027599.1 Protein Homology CDS 434034 434711 . + 0 gene_id "nbis-gene-367"; transcript_id "gene-C7A06_RS02165"; Dbxref "Genbank:WP_000816280.1"; ID "cds-WP_000816280.1"; Name "WP_000816280.1"; Ontology_term "GO:0006098" "GO:0004750"; Parent "gene-C7A06_RS02165"; gbkey "CDS"; gene "rpe"; go_function "D-ribulose-phosphate 3-epimerase activity|0004750||IEA"; go_process "pentose-phosphate shunt|0006098||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312255.1"; locus_tag "C7A06_RS02165"; product "ribulose-phosphate 3-epimerase"; protein_id "WP_000816280.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1967 NZ_CP027599.1 RefSeq gene 434704 435462 . + . gene_id "nbis-gene-368"; ID "nbis-gene-368"; Name "gph"; gbkey "Gene"; gene "gph"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02170";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1968 NZ_CP027599.1 RefSeq transcript 434704 435462 . + . gene_id "nbis-gene-368"; transcript_id "gene-C7A06_RS02170"; ID "gene-C7A06_RS02170"; Name "gph"; Parent "nbis-gene-368"; gbkey "Gene"; gene "gph"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02170"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1969 NZ_CP027599.1 Protein Homology exon 434704 435462 . + . gene_id "nbis-gene-368"; transcript_id "gene-C7A06_RS02170"; Dbxref "Genbank:WP_001031729.1"; ID "nbis-exon-379"; Name "WP_001031729.1"; Ontology_term "GO:0005975" "GO:0008967"; Parent "gene-C7A06_RS02170"; gbkey "CDS"; gene "gph"; go_function "phosphoglycolate phosphatase activity|0008967||IEA"; go_process "carbohydrate metabolic process|0005975||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417844.1"; locus_tag "C7A06_RS02170"; product "phosphoglycolate phosphatase"; protein_id "WP_001031729.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1970 NZ_CP027599.1 Protein Homology CDS 434704 435462 . + 0 gene_id "nbis-gene-368"; transcript_id "gene-C7A06_RS02170"; Dbxref "Genbank:WP_001031729.1"; ID "cds-WP_001031729.1"; Name "WP_001031729.1"; Ontology_term "GO:0005975" "GO:0008967"; Parent "gene-C7A06_RS02170"; gbkey "CDS"; gene "gph"; go_function "phosphoglycolate phosphatase activity|0008967||IEA"; go_process "carbohydrate metabolic process|0005975||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417844.1"; locus_tag "C7A06_RS02170"; product "phosphoglycolate phosphatase"; protein_id "WP_001031729.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1971 NZ_CP027599.1 RefSeq gene 435455 436459 . + . gene_id "nbis-gene-369"; ID "nbis-gene-369"; Name "trpS"; gbkey "Gene"; gene "trpS"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02175";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1972 NZ_CP027599.1 RefSeq transcript 435455 436459 . + . gene_id "nbis-gene-369"; transcript_id "gene-C7A06_RS02175"; ID "gene-C7A06_RS02175"; Name "trpS"; Parent "nbis-gene-369"; gbkey "Gene"; gene "trpS"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02175"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1973 NZ_CP027599.1 Protein Homology exon 435455 436459 . + . gene_id "nbis-gene-369"; transcript_id "gene-C7A06_RS02175"; Dbxref "Genbank:WP_000165553.1"; ID "nbis-exon-380"; Name "WP_000165553.1"; Ontology_term "GO:0006436" "GO:0004830" "GO:0005737"; Parent "gene-C7A06_RS02175"; gbkey "CDS"; gene "trpS"; go_component "cytoplasm|0005737||IEA"; go_function "tryptophan-tRNA ligase activity|0004830||IEA"; go_process "tryptophanyl-tRNA aminoacylation|0006436||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417843.1"; locus_tag "C7A06_RS02175"; product "tryptophan--tRNA ligase"; protein_id "WP_000165553.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1974 NZ_CP027599.1 Protein Homology CDS 435455 436459 . + 0 gene_id "nbis-gene-369"; transcript_id "gene-C7A06_RS02175"; Dbxref "Genbank:WP_000165553.1"; ID "cds-WP_000165553.1"; Name "WP_000165553.1"; Ontology_term "GO:0006436" "GO:0004830" "GO:0005737"; Parent "gene-C7A06_RS02175"; gbkey "CDS"; gene "trpS"; go_component "cytoplasm|0005737||IEA"; go_function "tryptophan-tRNA ligase activity|0004830||IEA"; go_process "tryptophanyl-tRNA aminoacylation|0006436||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417843.1"; locus_tag "C7A06_RS02175"; product "tryptophan--tRNA ligase"; protein_id "WP_000165553.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1975 NZ_CP027599.1 RefSeq gene 436728 437633 . + . gene_id "nbis-gene-370"; ID "nbis-gene-370"; Name "C7A06_RS02180"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02180";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1976 NZ_CP027599.1 RefSeq transcript 436728 437633 . + . gene_id "nbis-gene-370"; transcript_id "gene-C7A06_RS02180"; ID "gene-C7A06_RS02180"; Name "C7A06_RS02180"; Parent "nbis-gene-370"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02180"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1977 NZ_CP027599.1 Protein Homology exon 436728 437633 . + . gene_id "nbis-gene-370"; transcript_id "gene-C7A06_RS02180"; Dbxref "Genbank:WP_001254810.1"; ID "nbis-exon-381"; Name "WP_001254810.1"; Parent "gene-C7A06_RS02180"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026214.1"; locus_tag "C7A06_RS02180"; product "hypothetical protein"; protein_id "WP_001254810.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1978 NZ_CP027599.1 Protein Homology CDS 436728 437633 . + 0 gene_id "nbis-gene-370"; transcript_id "gene-C7A06_RS02180"; Dbxref "Genbank:WP_001254810.1"; ID "cds-WP_001254810.1"; Name "WP_001254810.1"; Parent "gene-C7A06_RS02180"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026214.1"; locus_tag "C7A06_RS02180"; product "hypothetical protein"; protein_id "WP_001254810.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1979 NZ_CP027599.1 RefSeq gene 437650 438012 . + . gene_id "nbis-gene-371"; ID "nbis-gene-371"; Name "yhfY"; gbkey "Gene"; gene "yhfY"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02185";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1980 NZ_CP027599.1 RefSeq transcript 437650 438012 . + . gene_id "nbis-gene-371"; transcript_id "gene-C7A06_RS02185"; ID "gene-C7A06_RS02185"; Name "yhfY"; Parent "nbis-gene-371"; gbkey "Gene"; gene "yhfY"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02185"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1981 NZ_CP027599.1 Protein Homology exon 437650 438012 . + . gene_id "nbis-gene-371"; transcript_id "gene-C7A06_RS02185"; Dbxref "Genbank:WP_001295165.1"; ID "nbis-exon-382"; Name "WP_001295165.1"; Parent "gene-C7A06_RS02185"; gbkey "CDS"; gene "yhfY"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417841.2"; locus_tag "C7A06_RS02185"; product "PRD domain protein"; protein_id "WP_001295165.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1982 NZ_CP027599.1 Protein Homology CDS 437650 438012 . + 0 gene_id "nbis-gene-371"; transcript_id "gene-C7A06_RS02185"; Dbxref "Genbank:WP_001295165.1"; ID "cds-WP_001295165.1"; Name "WP_001295165.1"; Parent "gene-C7A06_RS02185"; gbkey "CDS"; gene "yhfY"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417841.2"; locus_tag "C7A06_RS02185"; product "PRD domain protein"; protein_id "WP_001295165.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1983 NZ_CP027599.1 RefSeq gene 438096 439259 . + . gene_id "nbis-gene-372"; ID "nbis-gene-372"; Name "yhfX"; gbkey "Gene"; gene "yhfX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02190";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1984 NZ_CP027599.1 RefSeq transcript 438096 439259 . + . gene_id "nbis-gene-372"; transcript_id "gene-C7A06_RS02190"; ID "gene-C7A06_RS02190"; Name "yhfX"; Parent "nbis-gene-372"; gbkey "Gene"; gene "yhfX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02190"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1985 NZ_CP027599.1 Protein Homology exon 438096 439259 . + . gene_id "nbis-gene-372"; transcript_id "gene-C7A06_RS02190"; Dbxref "Genbank:WP_000497375.1"; ID "nbis-exon-383"; Name "WP_000497375.1"; Parent "gene-C7A06_RS02190"; gbkey "CDS"; gene "yhfX"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709154.1"; locus_tag "C7A06_RS02190"; product "YhfX family PLP-dependent enzyme"; protein_id "WP_000497375.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1986 NZ_CP027599.1 Protein Homology CDS 438096 439259 . + 0 gene_id "nbis-gene-372"; transcript_id "gene-C7A06_RS02190"; Dbxref "Genbank:WP_000497375.1"; ID "cds-WP_000497375.1"; Name "WP_000497375.1"; Parent "gene-C7A06_RS02190"; gbkey "CDS"; gene "yhfX"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709154.1"; locus_tag "C7A06_RS02190"; product "YhfX family PLP-dependent enzyme"; protein_id "WP_000497375.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1987 NZ_CP027599.1 RefSeq gene 439259 440485 . + . gene_id "nbis-gene-373"; ID "nbis-gene-373"; Name "yhfW"; gbkey "Gene"; gene "yhfW"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02195";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1988 NZ_CP027599.1 RefSeq transcript 439259 440485 . + . gene_id "nbis-gene-373"; transcript_id "gene-C7A06_RS02195"; ID "gene-C7A06_RS02195"; Name "yhfW"; Parent "nbis-gene-373"; gbkey "Gene"; gene "yhfW"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02195"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1989 NZ_CP027599.1 Protein Homology exon 439259 440485 . + . gene_id "nbis-gene-373"; transcript_id "gene-C7A06_RS02195"; Dbxref "Genbank:WP_000090578.1"; ID "nbis-exon-384"; Name "WP_000090578.1"; Ontology_term "GO:0008973"; Parent "gene-C7A06_RS02195"; gbkey "CDS"; gene "yhfW"; go_function "phosphopentomutase activity|0008973||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709153.1"; locus_tag "C7A06_RS02195"; product "phosphopentomutase"; protein_id "WP_000090578.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1990 NZ_CP027599.1 Protein Homology CDS 439259 440485 . + 0 gene_id "nbis-gene-373"; transcript_id "gene-C7A06_RS02195"; Dbxref "Genbank:WP_000090578.1"; ID "cds-WP_000090578.1"; Name "WP_000090578.1"; Ontology_term "GO:0008973"; Parent "gene-C7A06_RS02195"; gbkey "CDS"; gene "yhfW"; go_function "phosphopentomutase activity|0008973||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709153.1"; locus_tag "C7A06_RS02195"; product "phosphopentomutase"; protein_id "WP_000090578.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1991 NZ_CP027599.1 RefSeq gene 440482 441360 . + . gene_id "nbis-gene-374"; ID "nbis-gene-374"; Name "php"; gbkey "Gene"; gene "php"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02200";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1992 NZ_CP027599.1 RefSeq transcript 440482 441360 . + . gene_id "nbis-gene-374"; transcript_id "gene-C7A06_RS02200"; ID "gene-C7A06_RS02200"; Name "php"; Parent "nbis-gene-374"; gbkey "Gene"; gene "php"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02200"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1993 NZ_CP027599.1 Protein Homology exon 440482 441360 . + . gene_id "nbis-gene-374"; transcript_id "gene-C7A06_RS02200"; Dbxref "Genbank:WP_000020844.1"; ID "nbis-exon-385"; Name "WP_000020844.1"; Parent "gene-C7A06_RS02200"; gbkey "CDS"; gene "php"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417838.1"; locus_tag "C7A06_RS02200"; product "phosphotriesterase-related protein"; protein_id "WP_000020844.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1994 NZ_CP027599.1 Protein Homology CDS 440482 441360 . + 0 gene_id "nbis-gene-374"; transcript_id "gene-C7A06_RS02200"; Dbxref "Genbank:WP_000020844.1"; ID "cds-WP_000020844.1"; Name "WP_000020844.1"; Parent "gene-C7A06_RS02200"; gbkey "CDS"; gene "php"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417838.1"; locus_tag "C7A06_RS02200"; product "phosphotriesterase-related protein"; protein_id "WP_000020844.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1995 NZ_CP027599.1 RefSeq gene 441371 441724 . + . gene_id "nbis-gene-375"; ID "nbis-gene-375"; Name "yhfU"; gbkey "Gene"; gene "yhfU"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02205";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1996 NZ_CP027599.1 RefSeq transcript 441371 441724 . + . gene_id "nbis-gene-375"; transcript_id "gene-C7A06_RS02205"; ID "gene-C7A06_RS02205"; Name "yhfU"; Parent "nbis-gene-375"; gbkey "Gene"; gene "yhfU"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02205"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1997 NZ_CP027599.1 Protein Homology exon 441371 441724 . + . gene_id "nbis-gene-375"; transcript_id "gene-C7A06_RS02205"; Dbxref "Genbank:WP_001297518.1"; ID "nbis-exon-386"; Name "WP_001297518.1"; Parent "gene-C7A06_RS02205"; gbkey "CDS"; gene "yhfU"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417837.2"; locus_tag "C7A06_RS02205"; product "DUF2620 domain-containing protein"; protein_id "WP_001297518.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1998 NZ_CP027599.1 Protein Homology CDS 441371 441724 . + 0 gene_id "nbis-gene-375"; transcript_id "gene-C7A06_RS02205"; Dbxref "Genbank:WP_001297518.1"; ID "cds-WP_001297518.1"; Name "WP_001297518.1"; Parent "gene-C7A06_RS02205"; gbkey "CDS"; gene "yhfU"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417837.2"; locus_tag "C7A06_RS02205"; product "DUF2620 domain-containing protein"; protein_id "WP_001297518.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
1999 NZ_CP027599.1 RefSeq gene 441736 443040 . + . gene_id "nbis-gene-376"; ID "nbis-gene-376"; Name "yhfT"; gbkey "Gene"; gene "yhfT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02210";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2000 NZ_CP027599.1 RefSeq transcript 441736 443040 . + . gene_id "nbis-gene-376"; transcript_id "gene-C7A06_RS02210"; ID "gene-C7A06_RS02210"; Name "yhfT"; Parent "nbis-gene-376"; gbkey "Gene"; gene "yhfT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02210"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2001 NZ_CP027599.1 Protein Homology exon 441736 443040 . + . gene_id "nbis-gene-376"; transcript_id "gene-C7A06_RS02210"; Dbxref "Genbank:WP_000366877.1"; ID "nbis-exon-387"; Name "WP_000366877.1"; Parent "gene-C7A06_RS02210"; gbkey "CDS"; gene "yhfT"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709150.1"; locus_tag "C7A06_RS02210"; product "YhfT family protein"; protein_id "WP_000366877.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2002 NZ_CP027599.1 Protein Homology CDS 441736 443040 . + 0 gene_id "nbis-gene-376"; transcript_id "gene-C7A06_RS02210"; Dbxref "Genbank:WP_000366877.1"; ID "cds-WP_000366877.1"; Name "WP_000366877.1"; Parent "gene-C7A06_RS02210"; gbkey "CDS"; gene "yhfT"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709150.1"; locus_tag "C7A06_RS02210"; product "YhfT family protein"; protein_id "WP_000366877.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2003 NZ_CP027599.1 RefSeq gene 443052 444137 . + . gene_id "nbis-gene-377"; ID "nbis-gene-377"; Name "yhfS"; gbkey "Gene"; gene "yhfS"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02215";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2004 NZ_CP027599.1 RefSeq transcript 443052 444137 . + . gene_id "nbis-gene-377"; transcript_id "gene-C7A06_RS02215"; ID "gene-C7A06_RS02215"; Name "yhfS"; Parent "nbis-gene-377"; gbkey "Gene"; gene "yhfS"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02215"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2005 NZ_CP027599.1 Protein Homology exon 443052 444137 . + . gene_id "nbis-gene-377"; transcript_id "gene-C7A06_RS02215"; Dbxref "Genbank:WP_000847129.1"; ID "nbis-exon-388"; Name "WP_000847129.1"; Ontology_term "GO:0009058" "GO:0030170"; Parent "gene-C7A06_RS02215"; gbkey "CDS"; gene "yhfS"; go_function "pyridoxal phosphate binding|0030170||IEA"; go_process "biosynthetic process|0009058||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417835.1"; locus_tag "C7A06_RS02215"; product "aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme"; protein_id "WP_000847129.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2006 NZ_CP027599.1 Protein Homology CDS 443052 444137 . + 0 gene_id "nbis-gene-377"; transcript_id "gene-C7A06_RS02215"; Dbxref "Genbank:WP_000847129.1"; ID "cds-WP_000847129.1"; Name "WP_000847129.1"; Ontology_term "GO:0009058" "GO:0030170"; Parent "gene-C7A06_RS02215"; gbkey "CDS"; gene "yhfS"; go_function "pyridoxal phosphate binding|0030170||IEA"; go_process "biosynthetic process|0009058||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417835.1"; locus_tag "C7A06_RS02215"; product "aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme"; protein_id "WP_000847129.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2007 NZ_CP027599.1 RefSeq gene 444289 445020 . - . gene_id "nbis-gene-378"; ID "nbis-gene-378"; Name "phoB"; gbkey "Gene"; gene "phoB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02220";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2008 NZ_CP027599.1 RefSeq transcript 444289 445020 . - . gene_id "nbis-gene-378"; transcript_id "gene-C7A06_RS02220"; ID "gene-C7A06_RS02220"; Name "phoB"; Parent "nbis-gene-378"; gbkey "Gene"; gene "phoB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02220"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2009 NZ_CP027599.1 Protein Homology exon 444289 445020 . - . gene_id "nbis-gene-378"; transcript_id "gene-C7A06_RS02220"; Dbxref "Genbank:WP_001276847.1"; ID "nbis-exon-389"; Name "WP_001276847.1"; Parent "gene-C7A06_RS02220"; gbkey "CDS"; gene "phoB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417834.6"; locus_tag "C7A06_RS02220"; product "transcriptional regulator PhoB"; protein_id "WP_001276847.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2010 NZ_CP027599.1 Protein Homology CDS 444289 445020 . - 0 gene_id "nbis-gene-378"; transcript_id "gene-C7A06_RS02220"; Dbxref "Genbank:WP_001276847.1"; ID "cds-WP_001276847.1"; Name "WP_001276847.1"; Parent "gene-C7A06_RS02220"; gbkey "CDS"; gene "phoB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417834.6"; locus_tag "C7A06_RS02220"; product "transcriptional regulator PhoB"; protein_id "WP_001276847.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2011 NZ_CP027599.1 RefSeq gene 445120 445905 . - . gene_id "nbis-gene-379"; ID "nbis-gene-379"; Name "frlD"; gbkey "Gene"; gene "frlD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02225";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2012 NZ_CP027599.1 RefSeq transcript 445120 445905 . - . gene_id "nbis-gene-379"; transcript_id "gene-C7A06_RS02225"; ID "gene-C7A06_RS02225"; Name "frlD"; Parent "nbis-gene-379"; gbkey "Gene"; gene "frlD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02225"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2013 NZ_CP027599.1 Protein Homology exon 445120 445905 . - . gene_id "nbis-gene-379"; transcript_id "gene-C7A06_RS02225"; Dbxref "Genbank:WP_000853361.1"; ID "nbis-exon-390"; Name "WP_000853361.1"; Parent "gene-C7A06_RS02225"; gbkey "CDS"; gene "frlD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709147.1"; locus_tag "C7A06_RS02225"; product "fructoselysine 6-kinase"; protein_id "WP_000853361.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2014 NZ_CP027599.1 Protein Homology CDS 445120 445905 . - 0 gene_id "nbis-gene-379"; transcript_id "gene-C7A06_RS02225"; Dbxref "Genbank:WP_000853361.1"; ID "cds-WP_000853361.1"; Name "WP_000853361.1"; Parent "gene-C7A06_RS02225"; gbkey "CDS"; gene "frlD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709147.1"; locus_tag "C7A06_RS02225"; product "fructoselysine 6-kinase"; protein_id "WP_000853361.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2015 NZ_CP027599.1 RefSeq gene 445902 446732 . - . gene_id "nbis-gene-380"; ID "nbis-gene-380"; Name "frlC"; gbkey "Gene"; gene "frlC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02230";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2016 NZ_CP027599.1 RefSeq transcript 445902 446732 . - . gene_id "nbis-gene-380"; transcript_id "gene-C7A06_RS02230"; ID "gene-C7A06_RS02230"; Name "frlC"; Parent "nbis-gene-380"; gbkey "Gene"; gene "frlC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02230"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2017 NZ_CP027599.1 Protein Homology exon 445902 446732 . - . gene_id "nbis-gene-380"; transcript_id "gene-C7A06_RS02230"; Dbxref "Genbank:WP_000847834.1"; ID "nbis-exon-391"; Name "WP_000847834.1"; Parent "gene-C7A06_RS02230"; gbkey "CDS"; gene "frlC"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026213.1"; locus_tag "C7A06_RS02230"; product "fructoselysine 3-epimerase"; protein_id "WP_000847834.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2018 NZ_CP027599.1 Protein Homology CDS 445902 446732 . - 0 gene_id "nbis-gene-380"; transcript_id "gene-C7A06_RS02230"; Dbxref "Genbank:WP_000847834.1"; ID "cds-WP_000847834.1"; Name "WP_000847834.1"; Parent "gene-C7A06_RS02230"; gbkey "CDS"; gene "frlC"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026213.1"; locus_tag "C7A06_RS02230"; product "fructoselysine 3-epimerase"; protein_id "WP_000847834.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2019 NZ_CP027599.1 RefSeq gene 446782 447804 . - . gene_id "nbis-gene-381"; ID "nbis-gene-381"; Name "frlB"; gbkey "Gene"; gene "frlB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02240";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2020 NZ_CP027599.1 RefSeq transcript 446782 447804 . - . gene_id "nbis-gene-381"; transcript_id "gene-C7A06_RS02240"; ID "gene-C7A06_RS02240"; Name "frlB"; Parent "nbis-gene-381"; gbkey "Gene"; gene "frlB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02240"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2021 NZ_CP027599.1 Protein Homology exon 446782 447804 . - . gene_id "nbis-gene-381"; transcript_id "gene-C7A06_RS02240"; Dbxref "Genbank:WP_001307427.1"; ID "nbis-exon-392"; Name "WP_001307427.1"; Parent "gene-C7A06_RS02240"; gbkey "CDS"; gene "frlB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417830.4"; locus_tag "C7A06_RS02240"; product "fructoselysine 6-phosphate deglycase"; protein_id "WP_001307427.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2022 NZ_CP027599.1 Protein Homology CDS 446782 447804 . - 0 gene_id "nbis-gene-381"; transcript_id "gene-C7A06_RS02240"; Dbxref "Genbank:WP_001307427.1"; ID "cds-WP_001307427.1"; Name "WP_001307427.1"; Parent "gene-C7A06_RS02240"; gbkey "CDS"; gene "frlB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417830.4"; locus_tag "C7A06_RS02240"; product "fructoselysine 6-phosphate deglycase"; protein_id "WP_001307427.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2023 NZ_CP027599.1 RefSeq gene 447825 449162 . - . gene_id "nbis-gene-382"; ID "nbis-gene-382"; Name "frlA"; gbkey "Gene"; gene "frlA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02245";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2024 NZ_CP027599.1 RefSeq transcript 447825 449162 . - . gene_id "nbis-gene-382"; transcript_id "gene-C7A06_RS02245"; ID "gene-C7A06_RS02245"; Name "frlA"; Parent "nbis-gene-382"; gbkey "Gene"; gene "frlA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02245"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2025 NZ_CP027599.1 Protein Homology exon 447825 449162 . - . gene_id "nbis-gene-382"; transcript_id "gene-C7A06_RS02245"; Dbxref "Genbank:WP_000535505.1"; ID "nbis-exon-393"; Name "WP_000535505.1"; Parent "gene-C7A06_RS02245"; gbkey "CDS"; gene "frlA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417829.2"; locus_tag "C7A06_RS02245"; product "fructoselysine/psicoselysine transporter"; protein_id "WP_000535505.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2026 NZ_CP027599.1 Protein Homology CDS 447825 449162 . - 0 gene_id "nbis-gene-382"; transcript_id "gene-C7A06_RS02245"; Dbxref "Genbank:WP_000535505.1"; ID "cds-WP_000535505.1"; Name "WP_000535505.1"; Parent "gene-C7A06_RS02245"; gbkey "CDS"; gene "frlA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417829.2"; locus_tag "C7A06_RS02245"; product "fructoselysine/psicoselysine transporter"; protein_id "WP_000535505.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2027 NZ_CP027599.1 RefSeq gene 449457 449624 . - . gene_id "nbis-gene-383"; ID "nbis-gene-383"; Name "yhfL"; gbkey "Gene"; gene "yhfL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02250";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2028 NZ_CP027599.1 RefSeq transcript 449457 449624 . - . gene_id "nbis-gene-383"; transcript_id "gene-C7A06_RS02250"; ID "gene-C7A06_RS02250"; Name "yhfL"; Parent "nbis-gene-383"; gbkey "Gene"; gene "yhfL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02250"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2029 NZ_CP027599.1 Protein Homology exon 449457 449624 . - . gene_id "nbis-gene-383"; transcript_id "gene-C7A06_RS02250"; Dbxref "Genbank:WP_001031834.1"; ID "nbis-exon-394"; Name "WP_001031834.1"; Parent "gene-C7A06_RS02250"; gbkey "CDS"; gene "yhfL"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312247.1"; locus_tag "C7A06_RS02250"; product "YhfL family protein"; protein_id "WP_001031834.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2030 NZ_CP027599.1 Protein Homology CDS 449457 449624 . - 0 gene_id "nbis-gene-383"; transcript_id "gene-C7A06_RS02250"; Dbxref "Genbank:WP_001031834.1"; ID "cds-WP_001031834.1"; Name "WP_001031834.1"; Parent "gene-C7A06_RS02250"; gbkey "CDS"; gene "yhfL"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312247.1"; locus_tag "C7A06_RS02250"; product "YhfL family protein"; protein_id "WP_001031834.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2031 NZ_CP027599.1 RefSeq gene 449871 451244 . - . gene_id "nbis-gene-384"; ID "nbis-gene-384"; Name "cysG"; gbkey "Gene"; gene "cysG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02255";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2032 NZ_CP027599.1 RefSeq transcript 449871 451244 . - . gene_id "nbis-gene-384"; transcript_id "gene-C7A06_RS02255"; ID "gene-C7A06_RS02255"; Name "cysG"; Parent "nbis-gene-384"; gbkey "Gene"; gene "cysG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02255"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2033 NZ_CP027599.1 Protein Homology exon 449871 451244 . - . gene_id "nbis-gene-384"; transcript_id "gene-C7A06_RS02255"; Dbxref "Genbank:WP_000349881.1"; ID "nbis-exon-395"; Name "WP_000349881.1"; Ontology_term "GO:0019354" "GO:0004851" "GO:0043115" "GO:0051266" "GO:0051287"; Parent "gene-C7A06_RS02255"; gbkey "CDS"; gene "cysG"; go_function "uroporphyrin-III C-methyltransferase activity|0004851||IEA" "precorrin-2 dehydrogenase activity|0043115||IEA" "sirohydrochlorin ferrochelatase activity|0051266||IEA" "NAD binding|0051287||IEA"; go_process "siroheme biosynthetic process|0019354||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709143.1"; locus_tag "C7A06_RS02255"; product "siroheme synthase CysG"; protein_id "WP_000349881.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2034 NZ_CP027599.1 Protein Homology CDS 449871 451244 . - 0 gene_id "nbis-gene-384"; transcript_id "gene-C7A06_RS02255"; Dbxref "Genbank:WP_000349881.1"; ID "cds-WP_000349881.1"; Name "WP_000349881.1"; Ontology_term "GO:0019354" "GO:0004851" "GO:0043115" "GO:0051266" "GO:0051287"; Parent "gene-C7A06_RS02255"; gbkey "CDS"; gene "cysG"; go_function "uroporphyrin-III C-methyltransferase activity|0004851||IEA" "precorrin-2 dehydrogenase activity|0043115||IEA" "sirohydrochlorin ferrochelatase activity|0051266||IEA" "NAD binding|0051287||IEA"; go_process "siroheme biosynthetic process|0019354||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709143.1"; locus_tag "C7A06_RS02255"; product "siroheme synthase CysG"; protein_id "WP_000349881.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2035 NZ_CP027599.1 RefSeq gene 451263 452069 . - . gene_id "nbis-gene-385"; ID "nbis-gene-385"; Name "nirC"; gbkey "Gene"; gene "nirC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02260";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2036 NZ_CP027599.1 RefSeq transcript 451263 452069 . - . gene_id "nbis-gene-385"; transcript_id "gene-C7A06_RS02260"; ID "gene-C7A06_RS02260"; Name "nirC"; Parent "nbis-gene-385"; gbkey "Gene"; gene "nirC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02260"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2037 NZ_CP027599.1 Protein Homology exon 451263 452069 . - . gene_id "nbis-gene-385"; transcript_id "gene-C7A06_RS02260"; Dbxref "Genbank:WP_000493579.1"; ID "nbis-exon-396"; Name "WP_000493579.1"; Ontology_term "GO:0055085" "GO:0022857"; Parent "gene-C7A06_RS02260"; gbkey "CDS"; gene "nirC"; go_function "transmembrane transporter activity|0022857||IEA"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026212.2"; locus_tag "C7A06_RS02260"; product "nitrite transporter NirC"; protein_id "WP_000493579.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2038 NZ_CP027599.1 Protein Homology CDS 451263 452069 . - 0 gene_id "nbis-gene-385"; transcript_id "gene-C7A06_RS02260"; Dbxref "Genbank:WP_000493579.1"; ID "cds-WP_000493579.1"; Name "WP_000493579.1"; Ontology_term "GO:0055085" "GO:0022857"; Parent "gene-C7A06_RS02260"; gbkey "CDS"; gene "nirC"; go_function "transmembrane transporter activity|0022857||IEA"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026212.2"; locus_tag "C7A06_RS02260"; product "nitrite transporter NirC"; protein_id "WP_000493579.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2039 NZ_CP027599.1 RefSeq gene 452195 452521 . - . gene_id "nbis-gene-386"; ID "nbis-gene-386"; Name "nirD"; gbkey "Gene"; gene "nirD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02265";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2040 NZ_CP027599.1 RefSeq transcript 452195 452521 . - . gene_id "nbis-gene-386"; transcript_id "gene-C7A06_RS02265"; ID "gene-C7A06_RS02265"; Name "nirD"; Parent "nbis-gene-386"; gbkey "Gene"; gene "nirD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02265"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2041 NZ_CP027599.1 Protein Homology exon 452195 452521 . - . gene_id "nbis-gene-386"; transcript_id "gene-C7A06_RS02265"; Dbxref "Genbank:WP_000084764.1"; ID "nbis-exon-397"; Name "WP_000084764.1"; Parent "gene-C7A06_RS02265"; gbkey "CDS"; gene "nirD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312244.1"; locus_tag "C7A06_RS02265"; product "nitrite reductase small subunit NirD"; protein_id "WP_000084764.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2042 NZ_CP027599.1 Protein Homology CDS 452195 452521 . - 0 gene_id "nbis-gene-386"; transcript_id "gene-C7A06_RS02265"; Dbxref "Genbank:WP_000084764.1"; ID "cds-WP_000084764.1"; Name "WP_000084764.1"; Parent "gene-C7A06_RS02265"; gbkey "CDS"; gene "nirD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312244.1"; locus_tag "C7A06_RS02265"; product "nitrite reductase small subunit NirD"; protein_id "WP_000084764.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2043 NZ_CP027599.1 RefSeq gene 452518 455061 . - . gene_id "nbis-gene-387"; ID "nbis-gene-387"; Name "nirB"; gbkey "Gene"; gene "nirB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02270";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2044 NZ_CP027599.1 RefSeq transcript 452518 455061 . - . gene_id "nbis-gene-387"; transcript_id "gene-C7A06_RS02270"; ID "gene-C7A06_RS02270"; Name "nirB"; Parent "nbis-gene-387"; gbkey "Gene"; gene "nirB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02270"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2045 NZ_CP027599.1 Protein Homology exon 452518 455061 . - . gene_id "nbis-gene-387"; transcript_id "gene-C7A06_RS02270"; Dbxref "Genbank:WP_000049213.1"; ID "nbis-exon-398"; Name "WP_000049213.1"; Parent "gene-C7A06_RS02270"; gbkey "CDS"; gene "nirB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709140.2"; locus_tag "C7A06_RS02270"; product "NADPH-nitrite reductase large subunit"; protein_id "WP_000049213.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2046 NZ_CP027599.1 Protein Homology CDS 452518 455061 . - 0 gene_id "nbis-gene-387"; transcript_id "gene-C7A06_RS02270"; Dbxref "Genbank:WP_000049213.1"; ID "cds-WP_000049213.1"; Name "WP_000049213.1"; Parent "gene-C7A06_RS02270"; gbkey "CDS"; gene "nirB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709140.2"; locus_tag "C7A06_RS02270"; product "NADPH-nitrite reductase large subunit"; protein_id "WP_000049213.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2047 NZ_CP027599.1 RefSeq gene 455323 456504 . - . gene_id "nbis-gene-388"; ID "nbis-gene-388"; Name "tsgA"; gbkey "Gene"; gene "tsgA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02275";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2048 NZ_CP027599.1 RefSeq transcript 455323 456504 . - . gene_id "nbis-gene-388"; transcript_id "gene-C7A06_RS02275"; ID "gene-C7A06_RS02275"; Name "tsgA"; Parent "nbis-gene-388"; gbkey "Gene"; gene "tsgA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02275"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2049 NZ_CP027599.1 Protein Homology exon 455323 456504 . - . gene_id "nbis-gene-388"; transcript_id "gene-C7A06_RS02275"; Dbxref "Genbank:WP_000185247.1"; ID "nbis-exon-399"; Name "WP_000185247.1"; Ontology_term "GO:0055085" "GO:0022857"; Parent "gene-C7A06_RS02275"; gbkey "CDS"; gene "tsgA"; go_function "transmembrane transporter activity|0022857||IEA"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417823.1"; locus_tag "C7A06_RS02275"; product "MFS transporter TsgA"; protein_id "WP_000185247.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2050 NZ_CP027599.1 Protein Homology CDS 455323 456504 . - 0 gene_id "nbis-gene-388"; transcript_id "gene-C7A06_RS02275"; Dbxref "Genbank:WP_000185247.1"; ID "cds-WP_000185247.1"; Name "WP_000185247.1"; Ontology_term "GO:0055085" "GO:0022857"; Parent "gene-C7A06_RS02275"; gbkey "CDS"; gene "tsgA"; go_function "transmembrane transporter activity|0022857||IEA"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417823.1"; locus_tag "C7A06_RS02275"; product "MFS transporter TsgA"; protein_id "WP_000185247.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2051 NZ_CP027599.1 RefSeq gene 456775 457347 . + . gene_id "nbis-gene-389"; ID "nbis-gene-389"; Name "ppiA"; gbkey "Gene"; gene "ppiA"; gene_biotype "protein_coding"; gene_synonym "rotA"; locus_tag "C7A06_RS02280";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2052 NZ_CP027599.1 RefSeq transcript 456775 457347 . + . gene_id "nbis-gene-389"; transcript_id "gene-C7A06_RS02280"; ID "gene-C7A06_RS02280"; Name "ppiA"; Parent "nbis-gene-389"; gbkey "Gene"; gene "ppiA"; gene_biotype "protein_coding"; gene_synonym "rotA"; locus_tag "C7A06_RS02280"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2053 NZ_CP027599.1 Protein Homology exon 456775 457347 . + . gene_id "nbis-gene-389"; transcript_id "gene-C7A06_RS02280"; Dbxref "Genbank:WP_000477225.1"; ID "nbis-exon-400"; Name "WP_000477225.1"; Parent "gene-C7A06_RS02280"; gbkey "CDS"; gene "ppiA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312241.1"; locus_tag "C7A06_RS02280"; product "peptidylprolyl isomerase A"; protein_id "WP_000477225.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2054 NZ_CP027599.1 Protein Homology CDS 456775 457347 . + 0 gene_id "nbis-gene-389"; transcript_id "gene-C7A06_RS02280"; Dbxref "Genbank:WP_000477225.1"; ID "cds-WP_000477225.1"; Name "WP_000477225.1"; Parent "gene-C7A06_RS02280"; gbkey "CDS"; gene "ppiA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312241.1"; locus_tag "C7A06_RS02280"; product "peptidylprolyl isomerase A"; protein_id "WP_000477225.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2055 NZ_CP027599.1 RefSeq gene 457452 457619 . + . gene_id "nbis-gene-390"; ID "nbis-gene-390"; Name "yhfG"; gbkey "Gene"; gene "yhfG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02285";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2056 NZ_CP027599.1 RefSeq transcript 457452 457619 . + . gene_id "nbis-gene-390"; transcript_id "gene-C7A06_RS02285"; ID "gene-C7A06_RS02285"; Name "yhfG"; Parent "nbis-gene-390"; gbkey "Gene"; gene "yhfG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02285"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2057 NZ_CP027599.1 Protein Homology exon 457452 457619 . + . gene_id "nbis-gene-390"; transcript_id "gene-C7A06_RS02285"; Dbxref "Genbank:WP_000736860.1"; ID "nbis-exon-401"; Name "WP_000736860.1"; Parent "gene-C7A06_RS02285"; gbkey "CDS"; gene "yhfG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709137.1"; locus_tag "C7A06_RS02285"; product "YhfG family protein"; protein_id "WP_000736860.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2058 NZ_CP027599.1 Protein Homology CDS 457452 457619 . + 0 gene_id "nbis-gene-390"; transcript_id "gene-C7A06_RS02285"; Dbxref "Genbank:WP_000736860.1"; ID "cds-WP_000736860.1"; Name "WP_000736860.1"; Parent "gene-C7A06_RS02285"; gbkey "CDS"; gene "yhfG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709137.1"; locus_tag "C7A06_RS02285"; product "YhfG family protein"; protein_id "WP_000736860.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2059 NZ_CP027599.1 RefSeq gene 457609 458211 . + . gene_id "nbis-gene-391"; ID "nbis-gene-391"; Name "fic"; gbkey "Gene"; gene "fic"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02290";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2060 NZ_CP027599.1 RefSeq transcript 457609 458211 . + . gene_id "nbis-gene-391"; transcript_id "gene-C7A06_RS02290"; ID "gene-C7A06_RS02290"; Name "fic"; Parent "nbis-gene-391"; gbkey "Gene"; gene "fic"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02290"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2061 NZ_CP027599.1 Protein Homology exon 457609 458211 . + . gene_id "nbis-gene-391"; transcript_id "gene-C7A06_RS02290"; Dbxref "Genbank:WP_001280624.1"; ID "nbis-exon-402"; Name "WP_001280624.1"; Parent "gene-C7A06_RS02290"; gbkey "CDS"; gene "fic"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417820.1"; locus_tag "C7A06_RS02290"; product "putative adenosine monophosphate-protein transferase Fic"; protein_id "WP_001280624.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2062 NZ_CP027599.1 Protein Homology CDS 457609 458211 . + 0 gene_id "nbis-gene-391"; transcript_id "gene-C7A06_RS02290"; Dbxref "Genbank:WP_001280624.1"; ID "cds-WP_001280624.1"; Name "WP_001280624.1"; Parent "gene-C7A06_RS02290"; gbkey "CDS"; gene "fic"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417820.1"; locus_tag "C7A06_RS02290"; product "putative adenosine monophosphate-protein transferase Fic"; protein_id "WP_001280624.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
2063 NZ_CP027599.1 RefSeq gene 458243 458806 . + . gene_id "nbis-gene-392"; ID "nbis-gene-392"; Name "pabA"; gbkey "Gene"; gene "pabA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02295";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2064 NZ_CP027599.1 RefSeq transcript 458243 458806 . + . gene_id "nbis-gene-392"; transcript_id "gene-C7A06_RS02295"; ID "gene-C7A06_RS02295"; Name "pabA"; Parent "nbis-gene-392"; gbkey "Gene"; gene "pabA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02295"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2065 NZ_CP027599.1 Protein Homology exon 458243 458806 . + . gene_id "nbis-gene-392"; transcript_id "gene-C7A06_RS02295"; Dbxref "Genbank:WP_000601850.1"; ID "nbis-exon-403"; Name "WP_000601850.1"; Parent "gene-C7A06_RS02295"; gbkey "CDS"; gene "pabA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417819.1"; locus_tag "C7A06_RS02295"; product "aminodeoxychorismate synthase component 2"; protein_id "WP_000601850.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2066 NZ_CP027599.1 Protein Homology CDS 458243 458806 . + 0 gene_id "nbis-gene-392"; transcript_id "gene-C7A06_RS02295"; Dbxref "Genbank:WP_000601850.1"; ID "cds-WP_000601850.1"; Name "WP_000601850.1"; Parent "gene-C7A06_RS02295"; gbkey "CDS"; gene "pabA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417819.1"; locus_tag "C7A06_RS02295"; product "aminodeoxychorismate synthase component 2"; protein_id "WP_000601850.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2067 NZ_CP027599.1 RefSeq gene 458892 460112 . + . gene_id "nbis-gene-393"; ID "nbis-gene-393"; Name "argD"; gbkey "Gene"; gene "argD"; gene_biotype "protein_coding"; gene_synonym "dapC"; locus_tag "C7A06_RS02300";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2068 NZ_CP027599.1 RefSeq transcript 458892 460112 . + . gene_id "nbis-gene-393"; transcript_id "gene-C7A06_RS02300"; ID "gene-C7A06_RS02300"; Name "argD"; Parent "nbis-gene-393"; gbkey "Gene"; gene "argD"; gene_biotype "protein_coding"; gene_synonym "dapC"; locus_tag "C7A06_RS02300"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2069 NZ_CP027599.1 Protein Homology exon 458892 460112 . + . gene_id "nbis-gene-393"; transcript_id "gene-C7A06_RS02300"; Dbxref "Genbank:WP_000963792.1"; ID "nbis-exon-404"; Name "WP_000963792.1"; Parent "gene-C7A06_RS02300"; gbkey "CDS"; gene "argD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417818.1"; locus_tag "C7A06_RS02300"; product "bifunctional acetylornithine/succinyldiaminopimelate transaminase"; protein_id "WP_000963792.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2070 NZ_CP027599.1 Protein Homology CDS 458892 460112 . + 0 gene_id "nbis-gene-393"; transcript_id "gene-C7A06_RS02300"; Dbxref "Genbank:WP_000963792.1"; ID "cds-WP_000963792.1"; Name "WP_000963792.1"; Parent "gene-C7A06_RS02300"; gbkey "CDS"; gene "argD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417818.1"; locus_tag "C7A06_RS02300"; product "bifunctional acetylornithine/succinyldiaminopimelate transaminase"; protein_id "WP_000963792.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2071 NZ_CP027599.1 RefSeq gene 460179 462269 . - . gene_id "nbis-gene-394"; ID "nbis-gene-394"; Name "yhfK"; gbkey "Gene"; gene "yhfK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02305";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2072 NZ_CP027599.1 RefSeq transcript 460179 462269 . - . gene_id "nbis-gene-394"; transcript_id "gene-C7A06_RS02305"; ID "gene-C7A06_RS02305"; Name "yhfK"; Parent "nbis-gene-394"; gbkey "Gene"; gene "yhfK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02305"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2073 NZ_CP027599.1 Protein Homology exon 460179 462269 . - . gene_id "nbis-gene-394"; transcript_id "gene-C7A06_RS02305"; Dbxref "Genbank:WP_001295162.1"; ID "nbis-exon-405"; Name "WP_001295162.1"; Parent "gene-C7A06_RS02305"; gbkey "CDS"; gene "yhfK"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312236.3"; locus_tag "C7A06_RS02305"; product "YccS/YhfK family putative transporter"; protein_id "WP_001295162.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2074 NZ_CP027599.1 Protein Homology CDS 460179 462269 . - 0 gene_id "nbis-gene-394"; transcript_id "gene-C7A06_RS02305"; Dbxref "Genbank:WP_001295162.1"; ID "cds-WP_001295162.1"; Name "WP_001295162.1"; Parent "gene-C7A06_RS02305"; gbkey "CDS"; gene "yhfK"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312236.3"; locus_tag "C7A06_RS02305"; product "YccS/YhfK family putative transporter"; protein_id "WP_001295162.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2075 NZ_CP027599.1 RefSeq gene 462320 462952 . - . gene_id "nbis-gene-395"; ID "nbis-gene-395"; Name "crp"; gbkey "Gene"; gene "crp"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02310";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2076 NZ_CP027599.1 RefSeq transcript 462320 462952 . - . gene_id "nbis-gene-395"; transcript_id "gene-C7A06_RS02310"; ID "gene-C7A06_RS02310"; Name "crp"; Parent "nbis-gene-395"; gbkey "Gene"; gene "crp"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02310"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2077 NZ_CP027599.1 Protein Homology exon 462320 462952 . - . gene_id "nbis-gene-395"; transcript_id "gene-C7A06_RS02310"; Dbxref "Genbank:WP_000242755.1"; ID "nbis-exon-406"; Name "WP_000242755.1"; Ontology_term "GO:0006355" "GO:0003700"; Parent "gene-C7A06_RS02310"; gbkey "CDS"; gene "crp"; go_function "DNA-binding transcription factor activity|0003700||IEA"; go_process "regulation of transcription, DNA-templated|0006355||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312235.1"; locus_tag "C7A06_RS02310"; product "cAMP-activated global transcriptional regulator CRP"; protein_id "WP_000242755.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2078 NZ_CP027599.1 Protein Homology CDS 462320 462952 . - 0 gene_id "nbis-gene-395"; transcript_id "gene-C7A06_RS02310"; Dbxref "Genbank:WP_000242755.1"; ID "cds-WP_000242755.1"; Name "WP_000242755.1"; Ontology_term "GO:0006355" "GO:0003700"; Parent "gene-C7A06_RS02310"; gbkey "CDS"; gene "crp"; go_function "DNA-binding transcription factor activity|0003700||IEA"; go_process "regulation of transcription, DNA-templated|0006355||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312235.1"; locus_tag "C7A06_RS02310"; product "cAMP-activated global transcriptional regulator CRP"; protein_id "WP_000242755.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2079 NZ_CP027599.1 RefSeq gene 463254 463658 . + . gene_id "nbis-gene-396"; ID "nbis-gene-396"; Name "yhfA"; gbkey "Gene"; gene "yhfA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02320";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2080 NZ_CP027599.1 RefSeq transcript 463254 463658 . + . gene_id "nbis-gene-396"; transcript_id "gene-C7A06_RS02320"; ID "gene-C7A06_RS02320"; Name "yhfA"; Parent "nbis-gene-396"; gbkey "Gene"; gene "yhfA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02320"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2081 NZ_CP027599.1 Protein Homology exon 463254 463658 . + . gene_id "nbis-gene-396"; transcript_id "gene-C7A06_RS02320"; Dbxref "Genbank:WP_001148908.1"; ID "nbis-exon-407"; Name "WP_001148908.1"; Parent "gene-C7A06_RS02320"; gbkey "CDS"; gene "yhfA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312234.1"; locus_tag "C7A06_RS02320"; product "OsmC family protein"; protein_id "WP_001148908.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2082 NZ_CP027599.1 Protein Homology CDS 463254 463658 . + 0 gene_id "nbis-gene-396"; transcript_id "gene-C7A06_RS02320"; Dbxref "Genbank:WP_001148908.1"; ID "cds-WP_001148908.1"; Name "WP_001148908.1"; Parent "gene-C7A06_RS02320"; gbkey "CDS"; gene "yhfA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312234.1"; locus_tag "C7A06_RS02320"; product "OsmC family protein"; protein_id "WP_001148908.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2083 NZ_CP027599.1 RefSeq gene 463713 464582 . - . gene_id "nbis-gene-397"; ID "nbis-gene-397"; Name "prkB"; gbkey "Gene"; gene "prkB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02325";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2084 NZ_CP027599.1 RefSeq transcript 463713 464582 . - . gene_id "nbis-gene-397"; transcript_id "gene-C7A06_RS02325"; ID "gene-C7A06_RS02325"; Name "prkB"; Parent "nbis-gene-397"; gbkey "Gene"; gene "prkB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02325"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2085 NZ_CP027599.1 Protein Homology exon 463713 464582 . - . gene_id "nbis-gene-397"; transcript_id "gene-C7A06_RS02325"; Dbxref "Genbank:WP_001274680.1"; ID "nbis-exon-408"; Name "WP_001274680.1"; Ontology_term "GO:0005975" "GO:0005524" "GO:0008974"; Parent "gene-C7A06_RS02325"; gbkey "CDS"; gene "prkB"; go_function "ATP binding|0005524||IEA" "phosphoribulokinase activity|0008974||IEA"; go_process "carbohydrate metabolic process|0005975||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417814.1"; locus_tag "C7A06_RS02325"; product "phosphoribulokinase"; protein_id "WP_001274680.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2086 NZ_CP027599.1 Protein Homology CDS 463713 464582 . - 0 gene_id "nbis-gene-397"; transcript_id "gene-C7A06_RS02325"; Dbxref "Genbank:WP_001274680.1"; ID "cds-WP_001274680.1"; Name "WP_001274680.1"; Ontology_term "GO:0005975" "GO:0005524" "GO:0008974"; Parent "gene-C7A06_RS02325"; gbkey "CDS"; gene "prkB"; go_function "ATP binding|0005524||IEA" "phosphoribulokinase activity|0008974||IEA"; go_process "carbohydrate metabolic process|0005975||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417814.1"; locus_tag "C7A06_RS02325"; product "phosphoribulokinase"; protein_id "WP_001274680.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2087 NZ_CP027599.1 RefSeq gene 464636 464854 . - . gene_id "nbis-gene-398"; ID "nbis-gene-398"; Name "yheU"; gbkey "Gene"; gene "yheU"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02330";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2088 NZ_CP027599.1 RefSeq transcript 464636 464854 . - . gene_id "nbis-gene-398"; transcript_id "gene-C7A06_RS02330"; ID "gene-C7A06_RS02330"; Name "yheU"; Parent "nbis-gene-398"; gbkey "Gene"; gene "yheU"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02330"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2089 NZ_CP027599.1 Protein Homology exon 464636 464854 . - . gene_id "nbis-gene-398"; transcript_id "gene-C7A06_RS02330"; Dbxref "Genbank:WP_000907085.1"; ID "nbis-exon-409"; Name "WP_000907085.1"; Parent "gene-C7A06_RS02330"; gbkey "CDS"; gene "yheU"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312232.1"; locus_tag "C7A06_RS02330"; product "YheU family protein"; protein_id "WP_000907085.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2090 NZ_CP027599.1 Protein Homology CDS 464636 464854 . - 0 gene_id "nbis-gene-398"; transcript_id "gene-C7A06_RS02330"; Dbxref "Genbank:WP_000907085.1"; ID "cds-WP_000907085.1"; Name "WP_000907085.1"; Parent "gene-C7A06_RS02330"; gbkey "CDS"; gene "yheU"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312232.1"; locus_tag "C7A06_RS02330"; product "YheU family protein"; protein_id "WP_000907085.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2091 NZ_CP027599.1 RefSeq gene 464848 465870 . - . gene_id "nbis-gene-399"; ID "nbis-gene-399"; Name "yheT"; gbkey "Gene"; gene "yheT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02335";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2092 NZ_CP027599.1 RefSeq transcript 464848 465870 . - . gene_id "nbis-gene-399"; transcript_id "gene-C7A06_RS02335"; ID "gene-C7A06_RS02335"; Name "yheT"; Parent "nbis-gene-399"; gbkey "Gene"; gene "yheT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02335"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2093 NZ_CP027599.1 Protein Homology exon 464848 465870 . - . gene_id "nbis-gene-399"; transcript_id "gene-C7A06_RS02335"; Dbxref "Genbank:WP_000057356.1"; ID "nbis-exon-410"; Name "WP_000057356.1"; Ontology_term "GO:0016787"; Parent "gene-C7A06_RS02335"; gbkey "CDS"; gene "yheT"; go_function "hydrolase activity|0016787||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417812.1"; locus_tag "C7A06_RS02335"; product "hydrolase"; protein_id "WP_000057356.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2094 NZ_CP027599.1 Protein Homology CDS 464848 465870 . - 0 gene_id "nbis-gene-399"; transcript_id "gene-C7A06_RS02335"; Dbxref "Genbank:WP_000057356.1"; ID "cds-WP_000057356.1"; Name "WP_000057356.1"; Ontology_term "GO:0016787"; Parent "gene-C7A06_RS02335"; gbkey "CDS"; gene "yheT"; go_function "hydrolase activity|0016787||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417812.1"; locus_tag "C7A06_RS02335"; product "hydrolase"; protein_id "WP_000057356.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2095 NZ_CP027599.1 RefSeq gene 465870 467783 . - . gene_id "nbis-gene-400"; ID "nbis-gene-400"; Name "yheS"; gbkey "Gene"; gene "yheS"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02340";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2096 NZ_CP027599.1 RefSeq transcript 465870 467783 . - . gene_id "nbis-gene-400"; transcript_id "gene-C7A06_RS02340"; ID "gene-C7A06_RS02340"; Name "yheS"; Parent "nbis-gene-400"; gbkey "Gene"; gene "yheS"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02340"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2097 NZ_CP027599.1 Protein Homology exon 465870 467783 . - . gene_id "nbis-gene-400"; transcript_id "gene-C7A06_RS02340"; Dbxref "Genbank:WP_000634798.1"; ID "nbis-exon-411"; Name "WP_000634798.1"; Ontology_term "GO:0005524"; Parent "gene-C7A06_RS02340"; gbkey "CDS"; gene "yheS"; go_function "ATP binding|0005524||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312230.1"; locus_tag "C7A06_RS02340"; product "ABC transporter ATP-binding protein"; protein_id "WP_000634798.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2098 NZ_CP027599.1 Protein Homology CDS 465870 467783 . - 0 gene_id "nbis-gene-400"; transcript_id "gene-C7A06_RS02340"; Dbxref "Genbank:WP_000634798.1"; ID "cds-WP_000634798.1"; Name "WP_000634798.1"; Ontology_term "GO:0005524"; Parent "gene-C7A06_RS02340"; gbkey "CDS"; gene "yheS"; go_function "ATP binding|0005524||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312230.1"; locus_tag "C7A06_RS02340"; product "ABC transporter ATP-binding protein"; protein_id "WP_000634798.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2099 NZ_CP027599.1 RefSeq gene 467914 468465 . + . gene_id "nbis-gene-401"; ID "nbis-gene-401"; Name "kefG"; gbkey "Gene"; gene "kefG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02350";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2100 NZ_CP027599.1 RefSeq transcript 467914 468465 . + . gene_id "nbis-gene-401"; transcript_id "gene-C7A06_RS02350"; ID "gene-C7A06_RS02350"; Name "kefG"; Parent "nbis-gene-401"; gbkey "Gene"; gene "kefG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02350"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2101 NZ_CP027599.1 Protein Homology exon 467914 468465 . + . gene_id "nbis-gene-401"; transcript_id "gene-C7A06_RS02350"; Dbxref "Genbank:WP_001427705.1"; ID "nbis-exon-412"; Name "WP_001427705.1"; Ontology_term "GO:0006813"; Parent "gene-C7A06_RS02350"; gbkey "CDS"; gene "kefG"; go_process "potassium ion transport|0006813||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312229.2"; locus_tag "C7A06_RS02350"; product "glutathione-regulated potassium-efflux system ancillary protein KefG"; protein_id "WP_001427705.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2102 NZ_CP027599.1 Protein Homology CDS 467914 468465 . + 0 gene_id "nbis-gene-401"; transcript_id "gene-C7A06_RS02350"; Dbxref "Genbank:WP_001427705.1"; ID "cds-WP_001427705.1"; Name "WP_001427705.1"; Ontology_term "GO:0006813"; Parent "gene-C7A06_RS02350"; gbkey "CDS"; gene "kefG"; go_process "potassium ion transport|0006813||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312229.2"; locus_tag "C7A06_RS02350"; product "glutathione-regulated potassium-efflux system ancillary protein KefG"; protein_id "WP_001427705.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2103 NZ_CP027599.1 RefSeq gene 468465 470270 . + . gene_id "nbis-gene-402"; ID "nbis-gene-402"; Name "kefB"; gbkey "Gene"; gene "kefB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02355";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2104 NZ_CP027599.1 RefSeq transcript 468465 470270 . + . gene_id "nbis-gene-402"; transcript_id "gene-C7A06_RS02355"; ID "gene-C7A06_RS02355"; Name "kefB"; Parent "nbis-gene-402"; gbkey "Gene"; gene "kefB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02355"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2105 NZ_CP027599.1 Protein Homology exon 468465 470270 . + . gene_id "nbis-gene-402"; transcript_id "gene-C7A06_RS02355"; Dbxref "Genbank:WP_000399122.1"; ID "nbis-exon-413"; Name "WP_000399122.1"; Ontology_term "GO:0006813" "GO:0015503"; Parent "gene-C7A06_RS02355"; gbkey "CDS"; gene "kefB"; go_function "glutathione-regulated potassium exporter activity|0015503||IEA"; go_process "potassium ion transport|0006813||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417809.1"; locus_tag "C7A06_RS02355"; product "glutathione-regulated potassium-efflux system protein KefB"; protein_id "WP_000399122.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2106 NZ_CP027599.1 Protein Homology CDS 468465 470270 . + 0 gene_id "nbis-gene-402"; transcript_id "gene-C7A06_RS02355"; Dbxref "Genbank:WP_000399122.1"; ID "cds-WP_000399122.1"; Name "WP_000399122.1"; Ontology_term "GO:0006813" "GO:0015503"; Parent "gene-C7A06_RS02355"; gbkey "CDS"; gene "kefB"; go_function "glutathione-regulated potassium exporter activity|0015503||IEA"; go_process "potassium ion transport|0006813||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417809.1"; locus_tag "C7A06_RS02355"; product "glutathione-regulated potassium-efflux system protein KefB"; protein_id "WP_000399122.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2107 NZ_CP027599.1 RefSeq gene 470280 470480 . + . gene_id "nbis-gene-403"; ID "nbis-gene-403"; Name "yheV"; gbkey "Gene"; gene "yheV"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02360";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2108 NZ_CP027599.1 RefSeq transcript 470280 470480 . + . gene_id "nbis-gene-403"; transcript_id "gene-C7A06_RS02360"; ID "gene-C7A06_RS02360"; Name "yheV"; Parent "nbis-gene-403"; gbkey "Gene"; gene "yheV"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02360"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2109 NZ_CP027599.1 Protein Homology exon 470280 470480 . + . gene_id "nbis-gene-403"; transcript_id "gene-C7A06_RS02360"; Dbxref "Genbank:WP_001007730.1"; ID "nbis-exon-414"; Name "WP_001007730.1"; Parent "gene-C7A06_RS02360"; gbkey "CDS"; gene "yheV"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_588468.1"; locus_tag "C7A06_RS02360"; product "YheV family putative metal-binding protein"; protein_id "WP_001007730.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2110 NZ_CP027599.1 Protein Homology CDS 470280 470480 . + 0 gene_id "nbis-gene-403"; transcript_id "gene-C7A06_RS02360"; Dbxref "Genbank:WP_001007730.1"; ID "cds-WP_001007730.1"; Name "WP_001007730.1"; Parent "gene-C7A06_RS02360"; gbkey "CDS"; gene "yheV"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_588468.1"; locus_tag "C7A06_RS02360"; product "YheV family putative metal-binding protein"; protein_id "WP_001007730.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2111 NZ_CP027599.1 RefSeq gene 470575 471165 . + . gene_id "nbis-gene-404"; ID "nbis-gene-404"; Name "slyD"; gbkey "Gene"; gene "slyD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02365";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2112 NZ_CP027599.1 RefSeq transcript 470575 471165 . + . gene_id "nbis-gene-404"; transcript_id "gene-C7A06_RS02365"; ID "gene-C7A06_RS02365"; Name "slyD"; Parent "nbis-gene-404"; gbkey "Gene"; gene "slyD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02365"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2113 NZ_CP027599.1 Protein Homology exon 470575 471165 . + . gene_id "nbis-gene-404"; transcript_id "gene-C7A06_RS02365"; Dbxref "Genbank:WP_000861334.1"; ID "nbis-exon-415"; Name "WP_000861334.1"; Ontology_term "GO:0003755"; Parent "gene-C7A06_RS02365"; gbkey "CDS"; gene "slyD"; go_function "peptidyl-prolyl cis-trans isomerase activity|0003755||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312227.1"; locus_tag "C7A06_RS02365"; product "peptidylprolyl isomerase"; protein_id "WP_000861334.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2114 NZ_CP027599.1 Protein Homology CDS 470575 471165 . + 0 gene_id "nbis-gene-404"; transcript_id "gene-C7A06_RS02365"; Dbxref "Genbank:WP_000861334.1"; ID "cds-WP_000861334.1"; Name "WP_000861334.1"; Ontology_term "GO:0003755"; Parent "gene-C7A06_RS02365"; gbkey "CDS"; gene "slyD"; go_function "peptidyl-prolyl cis-trans isomerase activity|0003755||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312227.1"; locus_tag "C7A06_RS02365"; product "peptidylprolyl isomerase"; protein_id "WP_000861334.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2115 NZ_CP027599.1 RefSeq gene 471214 471432 . - . gene_id "nbis-gene-405"; ID "nbis-gene-405"; Name "slyX"; gbkey "Gene"; gene "slyX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02370";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2116 NZ_CP027599.1 RefSeq transcript 471214 471432 . - . gene_id "nbis-gene-405"; transcript_id "gene-C7A06_RS02370"; ID "gene-C7A06_RS02370"; Name "slyX"; Parent "nbis-gene-405"; gbkey "Gene"; gene "slyX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02370"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2117 NZ_CP027599.1 Protein Homology exon 471214 471432 . - . gene_id "nbis-gene-405"; transcript_id "gene-C7A06_RS02370"; Dbxref "Genbank:WP_001153615.1"; ID "nbis-exon-416"; Name "WP_001153615.1"; Parent "gene-C7A06_RS02370"; gbkey "CDS"; gene "slyX"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312226.1"; locus_tag "C7A06_RS02370"; product "SlyX family protein"; protein_id "WP_001153615.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2118 NZ_CP027599.1 Protein Homology CDS 471214 471432 . - 0 gene_id "nbis-gene-405"; transcript_id "gene-C7A06_RS02370"; Dbxref "Genbank:WP_001153615.1"; ID "cds-WP_001153615.1"; Name "WP_001153615.1"; Parent "gene-C7A06_RS02370"; gbkey "CDS"; gene "slyX"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312226.1"; locus_tag "C7A06_RS02370"; product "SlyX family protein"; protein_id "WP_001153615.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2119 NZ_CP027599.1 RefSeq gene 471653 472465 . + . gene_id "nbis-gene-406"; ID "nbis-gene-406"; Name "fkpA"; gbkey "Gene"; gene "fkpA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02375";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2120 NZ_CP027599.1 RefSeq transcript 471653 472465 . + . gene_id "nbis-gene-406"; transcript_id "gene-C7A06_RS02375"; ID "gene-C7A06_RS02375"; Name "fkpA"; Parent "nbis-gene-406"; gbkey "Gene"; gene "fkpA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02375"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2121 NZ_CP027599.1 Protein Homology exon 471653 472465 . + . gene_id "nbis-gene-406"; transcript_id "gene-C7A06_RS02375"; Dbxref "Genbank:WP_000838261.1"; ID "nbis-exon-417"; Name "WP_000838261.1"; Ontology_term "GO:0006457" "GO:0003755"; Parent "gene-C7A06_RS02375"; gbkey "CDS"; gene "fkpA"; go_function "peptidyl-prolyl cis-trans isomerase activity|0003755||IEA"; go_process "protein folding|0006457||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312225.1"; locus_tag "C7A06_RS02375"; product "FKBP-type peptidyl-prolyl cis-trans isomerase"; protein_id "WP_000838261.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2122 NZ_CP027599.1 Protein Homology CDS 471653 472465 . + 0 gene_id "nbis-gene-406"; transcript_id "gene-C7A06_RS02375"; Dbxref "Genbank:WP_000838261.1"; ID "cds-WP_000838261.1"; Name "WP_000838261.1"; Ontology_term "GO:0006457" "GO:0003755"; Parent "gene-C7A06_RS02375"; gbkey "CDS"; gene "fkpA"; go_function "peptidyl-prolyl cis-trans isomerase activity|0003755||IEA"; go_process "protein folding|0006457||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312225.1"; locus_tag "C7A06_RS02375"; product "FKBP-type peptidyl-prolyl cis-trans isomerase"; protein_id "WP_000838261.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2123 NZ_CP027599.1 RefSeq gene 472632 473354 . + . gene_id "nbis-gene-407"; ID "nbis-gene-407"; Name "yheO"; gbkey "Gene"; gene "yheO"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02380";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2124 NZ_CP027599.1 RefSeq transcript 472632 473354 . + . gene_id "nbis-gene-407"; transcript_id "gene-C7A06_RS02380"; ID "gene-C7A06_RS02380"; Name "yheO"; Parent "nbis-gene-407"; gbkey "Gene"; gene "yheO"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02380"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2125 NZ_CP027599.1 Protein Homology exon 472632 473354 . + . gene_id "nbis-gene-407"; transcript_id "gene-C7A06_RS02380"; Dbxref "Genbank:WP_000091466.1"; ID "nbis-exon-418"; Name "WP_000091466.1"; Parent "gene-C7A06_RS02380"; gbkey "CDS"; gene "yheO"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709120.2"; locus_tag "C7A06_RS02380"; product "transcriptional regulator"; protein_id "WP_000091466.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2126 NZ_CP027599.1 Protein Homology CDS 472632 473354 . + 0 gene_id "nbis-gene-407"; transcript_id "gene-C7A06_RS02380"; Dbxref "Genbank:WP_000091466.1"; ID "cds-WP_000091466.1"; Name "WP_000091466.1"; Parent "gene-C7A06_RS02380"; gbkey "CDS"; gene "yheO"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709120.2"; locus_tag "C7A06_RS02380"; product "transcriptional regulator"; protein_id "WP_000091466.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2127 NZ_CP027599.1 RefSeq gene 473354 473740 . + . gene_id "nbis-gene-408"; ID "nbis-gene-408"; Name "tusD"; gbkey "Gene"; gene "tusD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02385";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2128 NZ_CP027599.1 RefSeq transcript 473354 473740 . + . gene_id "nbis-gene-408"; transcript_id "gene-C7A06_RS02385"; ID "gene-C7A06_RS02385"; Name "tusD"; Parent "nbis-gene-408"; gbkey "Gene"; gene "tusD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02385"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2129 NZ_CP027599.1 Protein Homology exon 473354 473740 . + . gene_id "nbis-gene-408"; transcript_id "gene-C7A06_RS02385"; Dbxref "Genbank:WP_001209710.1"; ID "nbis-exon-419"; Name "WP_001209710.1"; Ontology_term "GO:0008033" "GO:0016783"; Parent "gene-C7A06_RS02385"; gbkey "CDS"; gene "tusD"; go_function "sulfurtransferase activity|0016783||IEA"; go_process "tRNA processing|0008033||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709119.1"; locus_tag "C7A06_RS02385"; product "sulfurtransferase complex subunit TusD"; protein_id "WP_001209710.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2130 NZ_CP027599.1 Protein Homology CDS 473354 473740 . + 0 gene_id "nbis-gene-408"; transcript_id "gene-C7A06_RS02385"; Dbxref "Genbank:WP_001209710.1"; ID "cds-WP_001209710.1"; Name "WP_001209710.1"; Ontology_term "GO:0008033" "GO:0016783"; Parent "gene-C7A06_RS02385"; gbkey "CDS"; gene "tusD"; go_function "sulfurtransferase activity|0016783||IEA"; go_process "tRNA processing|0008033||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709119.1"; locus_tag "C7A06_RS02385"; product "sulfurtransferase complex subunit TusD"; protein_id "WP_001209710.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2131 NZ_CP027599.1 RefSeq gene 473740 474099 . + . gene_id "nbis-gene-409"; ID "nbis-gene-409"; Name "tusC"; gbkey "Gene"; gene "tusC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02390";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2132 NZ_CP027599.1 RefSeq transcript 473740 474099 . + . gene_id "nbis-gene-409"; transcript_id "gene-C7A06_RS02390"; ID "gene-C7A06_RS02390"; Name "tusC"; Parent "nbis-gene-409"; gbkey "Gene"; gene "tusC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02390"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2133 NZ_CP027599.1 Protein Homology exon 473740 474099 . + . gene_id "nbis-gene-409"; transcript_id "gene-C7A06_RS02390"; Dbxref "Genbank:WP_000820720.1"; ID "nbis-exon-420"; Name "WP_000820720.1"; Parent "gene-C7A06_RS02390"; gbkey "CDS"; gene "tusC"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417803.1"; locus_tag "C7A06_RS02390"; product "sulfurtransferase complex subunit TusC"; protein_id "WP_000820720.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2134 NZ_CP027599.1 Protein Homology CDS 473740 474099 . + 0 gene_id "nbis-gene-409"; transcript_id "gene-C7A06_RS02390"; Dbxref "Genbank:WP_000820720.1"; ID "cds-WP_000820720.1"; Name "WP_000820720.1"; Parent "gene-C7A06_RS02390"; gbkey "CDS"; gene "tusC"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417803.1"; locus_tag "C7A06_RS02390"; product "sulfurtransferase complex subunit TusC"; protein_id "WP_000820720.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2135 NZ_CP027599.1 RefSeq gene 474107 474394 . + . gene_id "nbis-gene-410"; ID "nbis-gene-410"; Name "tusB"; gbkey "Gene"; gene "tusB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02395";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2136 NZ_CP027599.1 RefSeq transcript 474107 474394 . + . gene_id "nbis-gene-410"; transcript_id "gene-C7A06_RS02395"; ID "gene-C7A06_RS02395"; Name "tusB"; Parent "nbis-gene-410"; gbkey "Gene"; gene "tusB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02395"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2137 NZ_CP027599.1 Protein Homology exon 474107 474394 . + . gene_id "nbis-gene-410"; transcript_id "gene-C7A06_RS02395"; Dbxref "Genbank:WP_000903377.1"; ID "nbis-exon-421"; Name "WP_000903377.1"; Ontology_term "GO:0002143"; Parent "gene-C7A06_RS02395"; gbkey "CDS"; gene "tusB"; go_process "tRNA wobble position uridine thiolation|0002143||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312221.1"; locus_tag "C7A06_RS02395"; product "sulfurtransferase complex subunit TusB"; protein_id "WP_000903377.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2138 NZ_CP027599.1 Protein Homology CDS 474107 474394 . + 0 gene_id "nbis-gene-410"; transcript_id "gene-C7A06_RS02395"; Dbxref "Genbank:WP_000903377.1"; ID "cds-WP_000903377.1"; Name "WP_000903377.1"; Ontology_term "GO:0002143"; Parent "gene-C7A06_RS02395"; gbkey "CDS"; gene "tusB"; go_process "tRNA wobble position uridine thiolation|0002143||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312221.1"; locus_tag "C7A06_RS02395"; product "sulfurtransferase complex subunit TusB"; protein_id "WP_000903377.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2139 NZ_CP027599.1 RefSeq gene 474520 474894 . + . gene_id "nbis-gene-411"; ID "nbis-gene-411"; Name "rpsL"; gbkey "Gene"; gene "rpsL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02400";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2140 NZ_CP027599.1 RefSeq transcript 474520 474894 . + . gene_id "nbis-gene-411"; transcript_id "gene-C7A06_RS02400"; ID "gene-C7A06_RS02400"; Name "rpsL"; Parent "nbis-gene-411"; gbkey "Gene"; gene "rpsL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02400"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2141 NZ_CP027599.1 Protein Homology exon 474520 474894 . + . gene_id "nbis-gene-411"; transcript_id "gene-C7A06_RS02400"; Dbxref "Genbank:WP_000246815.1"; ID "nbis-exon-422"; Name "WP_000246815.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000314" "GO:0022627"; Parent "gene-C7A06_RS02400"; gbkey "CDS"; gene "rpsL"; go_component "organellar small ribosomal subunit|0000314||IEA" "cytosolic small ribosomal subunit|0022627||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1"; locus_tag "C7A06_RS02400"; product "30S ribosomal protein S12"; protein_id "WP_000246815.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2142 NZ_CP027599.1 Protein Homology CDS 474520 474894 . + 0 gene_id "nbis-gene-411"; transcript_id "gene-C7A06_RS02400"; Dbxref "Genbank:WP_000246815.1"; ID "cds-WP_000246815.1"; Name "WP_000246815.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000314" "GO:0022627"; Parent "gene-C7A06_RS02400"; gbkey "CDS"; gene "rpsL"; go_component "organellar small ribosomal subunit|0000314||IEA" "cytosolic small ribosomal subunit|0022627||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1"; locus_tag "C7A06_RS02400"; product "30S ribosomal protein S12"; protein_id "WP_000246815.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2143 NZ_CP027599.1 RefSeq gene 474991 475461 . + . gene_id "nbis-gene-412"; ID "nbis-gene-412"; Name "rpsG"; gbkey "Gene"; gene "rpsG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02405";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2144 NZ_CP027599.1 RefSeq transcript 474991 475461 . + . gene_id "nbis-gene-412"; transcript_id "gene-C7A06_RS02405"; ID "gene-C7A06_RS02405"; Name "rpsG"; Parent "nbis-gene-412"; gbkey "Gene"; gene "rpsG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02405"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2145 NZ_CP027599.1 Protein Homology exon 474991 475461 . + . gene_id "nbis-gene-412"; transcript_id "gene-C7A06_RS02405"; Dbxref "Genbank:WP_001138043.1"; ID "nbis-exon-423"; Name "WP_001138043.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000314" "GO:0022627"; Parent "gene-C7A06_RS02405"; gbkey "CDS"; gene "rpsG"; go_component "organellar small ribosomal subunit|0000314||IEA" "cytosolic small ribosomal subunit|0022627||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1"; locus_tag "C7A06_RS02405"; product "30S ribosomal protein S7"; protein_id "WP_001138043.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2146 NZ_CP027599.1 Protein Homology CDS 474991 475461 . + 0 gene_id "nbis-gene-412"; transcript_id "gene-C7A06_RS02405"; Dbxref "Genbank:WP_001138043.1"; ID "cds-WP_001138043.1"; Name "WP_001138043.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000314" "GO:0022627"; Parent "gene-C7A06_RS02405"; gbkey "CDS"; gene "rpsG"; go_component "organellar small ribosomal subunit|0000314||IEA" "cytosolic small ribosomal subunit|0022627||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1"; locus_tag "C7A06_RS02405"; product "30S ribosomal protein S7"; protein_id "WP_001138043.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2147 NZ_CP027599.1 RefSeq gene 475558 477672 . + . gene_id "nbis-gene-413"; ID "nbis-gene-413"; Name "fusA"; gbkey "Gene"; gene "fusA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02410";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2148 NZ_CP027599.1 RefSeq transcript 475558 477672 . + . gene_id "nbis-gene-413"; transcript_id "gene-C7A06_RS02410"; ID "gene-C7A06_RS02410"; Name "fusA"; Parent "nbis-gene-413"; gbkey "Gene"; gene "fusA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02410"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2149 NZ_CP027599.1 Protein Homology exon 475558 477672 . + . gene_id "nbis-gene-413"; transcript_id "gene-C7A06_RS02410"; Dbxref "Genbank:WP_000124700.1"; ID "nbis-exon-424"; Name "WP_000124700.1"; Ontology_term "GO:0006414" "GO:0003746"; Parent "gene-C7A06_RS02410"; gbkey "CDS"; gene "fusA"; go_function "translation elongation factor activity|0003746||IEA"; go_process "translational elongation|0006414||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1"; locus_tag "C7A06_RS02410"; product "elongation factor G"; protein_id "WP_000124700.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2150 NZ_CP027599.1 Protein Homology CDS 475558 477672 . + 0 gene_id "nbis-gene-413"; transcript_id "gene-C7A06_RS02410"; Dbxref "Genbank:WP_000124700.1"; ID "cds-WP_000124700.1"; Name "WP_000124700.1"; Ontology_term "GO:0006414" "GO:0003746"; Parent "gene-C7A06_RS02410"; gbkey "CDS"; gene "fusA"; go_function "translation elongation factor activity|0003746||IEA"; go_process "translational elongation|0006414||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1"; locus_tag "C7A06_RS02410"; product "elongation factor G"; protein_id "WP_000124700.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2151 NZ_CP027599.1 RefSeq gene 477743 478927 . + . gene_id "nbis-gene-414"; ID "nbis-gene-414"; Name "tuf"; gbkey "Gene"; gene "tuf"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02415";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2152 NZ_CP027599.1 RefSeq transcript 477743 478927 . + . gene_id "nbis-gene-414"; transcript_id "gene-C7A06_RS02415"; ID "gene-C7A06_RS02415"; Name "tuf"; Parent "nbis-gene-414"; gbkey "Gene"; gene "tuf"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02415"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2153 NZ_CP027599.1 Protein Homology exon 477743 478927 . + . gene_id "nbis-gene-414"; transcript_id "gene-C7A06_RS02415"; Dbxref "Genbank:WP_000031783.1"; ID "nbis-exon-425"; Name "WP_000031783.1"; Ontology_term "GO:0006414" "GO:0003746"; Parent "gene-C7A06_RS02415"; gbkey "CDS"; gene "tuf"; go_function "translation elongation factor activity|0003746||IEA"; go_process "translational elongation|0006414||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312217.1"; locus_tag "C7A06_RS02415"; product "elongation factor Tu"; protein_id "WP_000031783.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2154 NZ_CP027599.1 Protein Homology CDS 477743 478927 . + 0 gene_id "nbis-gene-414"; transcript_id "gene-C7A06_RS02415"; Dbxref "Genbank:WP_000031783.1"; ID "cds-WP_000031783.1"; Name "WP_000031783.1"; Ontology_term "GO:0006414" "GO:0003746"; Parent "gene-C7A06_RS02415"; gbkey "CDS"; gene "tuf"; go_function "translation elongation factor activity|0003746||IEA"; go_process "translational elongation|0006414||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312217.1"; locus_tag "C7A06_RS02415"; product "elongation factor Tu"; protein_id "WP_000031783.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2155 NZ_CP027599.1 RefSeq gene 479110 479304 . + . gene_id "nbis-gene-415"; ID "nbis-gene-415"; Name "bfd"; gbkey "Gene"; gene "bfd"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02425";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2156 NZ_CP027599.1 RefSeq transcript 479110 479304 . + . gene_id "nbis-gene-415"; transcript_id "gene-C7A06_RS02425"; ID "gene-C7A06_RS02425"; Name "bfd"; Parent "nbis-gene-415"; gbkey "Gene"; gene "bfd"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02425"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2157 NZ_CP027599.1 Protein Homology exon 479110 479304 . + . gene_id "nbis-gene-415"; transcript_id "gene-C7A06_RS02425"; Dbxref "Genbank:WP_000289090.1"; ID "nbis-exon-426"; Name "WP_000289090.1"; Parent "gene-C7A06_RS02425"; gbkey "CDS"; gene "bfd"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709112.1"; locus_tag "C7A06_RS02425"; product "bacterioferritin-associated ferredoxin"; protein_id "WP_000289090.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2158 NZ_CP027599.1 Protein Homology CDS 479110 479304 . + 0 gene_id "nbis-gene-415"; transcript_id "gene-C7A06_RS02425"; Dbxref "Genbank:WP_000289090.1"; ID "cds-WP_000289090.1"; Name "WP_000289090.1"; Parent "gene-C7A06_RS02425"; gbkey "CDS"; gene "bfd"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709112.1"; locus_tag "C7A06_RS02425"; product "bacterioferritin-associated ferredoxin"; protein_id "WP_000289090.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2159 NZ_CP027599.1 RefSeq gene 479377 479853 . + . gene_id "nbis-gene-416"; ID "nbis-gene-416"; Name "bfr"; gbkey "Gene"; gene "bfr"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02430";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2160 NZ_CP027599.1 RefSeq transcript 479377 479853 . + . gene_id "nbis-gene-416"; transcript_id "gene-C7A06_RS02430"; ID "gene-C7A06_RS02430"; Name "bfr"; Parent "nbis-gene-416"; gbkey "Gene"; gene "bfr"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02430"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2161 NZ_CP027599.1 Protein Homology exon 479377 479853 . + . gene_id "nbis-gene-416"; transcript_id "gene-C7A06_RS02430"; Dbxref "Genbank:WP_000675517.1"; ID "nbis-exon-427"; Name "WP_000675517.1"; Ontology_term "GO:0006880" "GO:0004322" "GO:0008199"; Parent "gene-C7A06_RS02430"; gbkey "CDS"; gene "bfr"; go_function "ferroxidase activity|0004322||IEA" "ferric iron binding|0008199||IEA"; go_process "intracellular sequestering of iron ion|0006880||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709111.1"; locus_tag "C7A06_RS02430"; product "bacterioferritin"; protein_id "WP_000675517.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2162 NZ_CP027599.1 Protein Homology CDS 479377 479853 . + 0 gene_id "nbis-gene-416"; transcript_id "gene-C7A06_RS02430"; Dbxref "Genbank:WP_000675517.1"; ID "cds-WP_000675517.1"; Name "WP_000675517.1"; Ontology_term "GO:0006880" "GO:0004322" "GO:0008199"; Parent "gene-C7A06_RS02430"; gbkey "CDS"; gene "bfr"; go_function "ferroxidase activity|0004322||IEA" "ferric iron binding|0008199||IEA"; go_process "intracellular sequestering of iron ion|0006880||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709111.1"; locus_tag "C7A06_RS02430"; product "bacterioferritin"; protein_id "WP_000675517.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2163 NZ_CP027599.1 RefSeq gene 479850 480317 . - . gene_id "nbis-gene-417"; ID "nbis-gene-417"; Name "C7A06_RS02435"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02435";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2164 NZ_CP027599.1 RefSeq transcript 479850 480317 . - . gene_id "nbis-gene-417"; transcript_id "gene-C7A06_RS02435"; ID "gene-C7A06_RS02435"; Name "C7A06_RS02435"; Parent "nbis-gene-417"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02435"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2165 NZ_CP027599.1 Protein Homology exon 479850 480317 . - . gene_id "nbis-gene-417"; transcript_id "gene-C7A06_RS02435"; Dbxref "Genbank:WP_000339836.1"; ID "nbis-exon-428"; Name "WP_000339836.1"; Parent "gene-C7A06_RS02435"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312215.1"; locus_tag "C7A06_RS02435"; product "A24 family peptidase"; protein_id "WP_000339836.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2166 NZ_CP027599.1 Protein Homology CDS 479850 480317 . - 0 gene_id "nbis-gene-417"; transcript_id "gene-C7A06_RS02435"; Dbxref "Genbank:WP_000339836.1"; ID "cds-WP_000339836.1"; Name "WP_000339836.1"; Parent "gene-C7A06_RS02435"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312215.1"; locus_tag "C7A06_RS02435"; product "A24 family peptidase"; protein_id "WP_000339836.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2167 NZ_CP027599.1 RefSeq gene 480696 481007 . + . gene_id "nbis-gene-418"; ID "nbis-gene-418"; Name "rpsJ"; gbkey "Gene"; gene "rpsJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02445";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2168 NZ_CP027599.1 RefSeq transcript 480696 481007 . + . gene_id "nbis-gene-418"; transcript_id "gene-C7A06_RS02445"; ID "gene-C7A06_RS02445"; Name "rpsJ"; Parent "nbis-gene-418"; gbkey "Gene"; gene "rpsJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02445"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2169 NZ_CP027599.1 Protein Homology exon 480696 481007 . + . gene_id "nbis-gene-418"; transcript_id "gene-C7A06_RS02445"; Dbxref "Genbank:WP_001181004.1"; ID "nbis-exon-429"; Name "WP_001181004.1"; Ontology_term "GO:0006412" "GO:0003723" "GO:0003735" "GO:0005840"; Parent "gene-C7A06_RS02445"; gbkey "CDS"; gene "rpsJ"; go_component "ribosome|0005840||IEA"; go_function "RNA binding|0003723||IEA" "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1"; locus_tag "C7A06_RS02445"; product "30S ribosomal protein S10"; protein_id "WP_001181004.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2170 NZ_CP027599.1 Protein Homology CDS 480696 481007 . + 0 gene_id "nbis-gene-418"; transcript_id "gene-C7A06_RS02445"; Dbxref "Genbank:WP_001181004.1"; ID "cds-WP_001181004.1"; Name "WP_001181004.1"; Ontology_term "GO:0006412" "GO:0003723" "GO:0003735" "GO:0005840"; Parent "gene-C7A06_RS02445"; gbkey "CDS"; gene "rpsJ"; go_component "ribosome|0005840||IEA"; go_function "RNA binding|0003723||IEA" "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1"; locus_tag "C7A06_RS02445"; product "30S ribosomal protein S10"; protein_id "WP_001181004.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2171 NZ_CP027599.1 RefSeq gene 481040 481669 . + . gene_id "nbis-gene-419"; ID "nbis-gene-419"; Name "rplC"; gbkey "Gene"; gene "rplC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02450";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2172 NZ_CP027599.1 RefSeq transcript 481040 481669 . + . gene_id "nbis-gene-419"; transcript_id "gene-C7A06_RS02450"; ID "gene-C7A06_RS02450"; Name "rplC"; Parent "nbis-gene-419"; gbkey "Gene"; gene "rplC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02450"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2173 NZ_CP027599.1 Protein Homology exon 481040 481669 . + . gene_id "nbis-gene-419"; transcript_id "gene-C7A06_RS02450"; Dbxref "Genbank:WP_000579833.1"; ID "nbis-exon-430"; Name "WP_000579833.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0005840"; Parent "gene-C7A06_RS02450"; gbkey "CDS"; gene "rplC"; go_component "ribosome|0005840||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1"; locus_tag "C7A06_RS02450"; product "50S ribosomal protein L3"; protein_id "WP_000579833.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2174 NZ_CP027599.1 Protein Homology CDS 481040 481669 . + 0 gene_id "nbis-gene-419"; transcript_id "gene-C7A06_RS02450"; Dbxref "Genbank:WP_000579833.1"; ID "cds-WP_000579833.1"; Name "WP_000579833.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0005840"; Parent "gene-C7A06_RS02450"; gbkey "CDS"; gene "rplC"; go_component "ribosome|0005840||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1"; locus_tag "C7A06_RS02450"; product "50S ribosomal protein L3"; protein_id "WP_000579833.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2175 NZ_CP027599.1 RefSeq gene 481680 482285 . + . gene_id "nbis-gene-420"; ID "nbis-gene-420"; Name "rplD"; gbkey "Gene"; gene "rplD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02455";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2176 NZ_CP027599.1 RefSeq transcript 481680 482285 . + . gene_id "nbis-gene-420"; transcript_id "gene-C7A06_RS02455"; ID "gene-C7A06_RS02455"; Name "rplD"; Parent "nbis-gene-420"; gbkey "Gene"; gene "rplD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02455"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2177 NZ_CP027599.1 Protein Homology exon 481680 482285 . + . gene_id "nbis-gene-420"; transcript_id "gene-C7A06_RS02455"; Dbxref "Genbank:WP_000424395.1"; ID "nbis-exon-431"; Name "WP_000424395.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0022625"; Parent "gene-C7A06_RS02455"; gbkey "CDS"; gene "rplD"; go_component "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1"; locus_tag "C7A06_RS02455"; product "50S ribosomal protein L4"; protein_id "WP_000424395.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2178 NZ_CP027599.1 Protein Homology CDS 481680 482285 . + 0 gene_id "nbis-gene-420"; transcript_id "gene-C7A06_RS02455"; Dbxref "Genbank:WP_000424395.1"; ID "cds-WP_000424395.1"; Name "WP_000424395.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0022625"; Parent "gene-C7A06_RS02455"; gbkey "CDS"; gene "rplD"; go_component "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1"; locus_tag "C7A06_RS02455"; product "50S ribosomal protein L4"; protein_id "WP_000424395.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2179 NZ_CP027599.1 RefSeq gene 482282 482584 . + . gene_id "nbis-gene-421"; ID "nbis-gene-421"; Name "rplW"; gbkey "Gene"; gene "rplW"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02460";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2180 NZ_CP027599.1 RefSeq transcript 482282 482584 . + . gene_id "nbis-gene-421"; transcript_id "gene-C7A06_RS02460"; ID "gene-C7A06_RS02460"; Name "rplW"; Parent "nbis-gene-421"; gbkey "Gene"; gene "rplW"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02460"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2181 NZ_CP027599.1 Protein Homology exon 482282 482584 . + . gene_id "nbis-gene-421"; transcript_id "gene-C7A06_RS02460"; Dbxref "Genbank:WP_000617544.1"; ID "nbis-exon-432"; Name "WP_000617544.1"; Parent "gene-C7A06_RS02460"; gbkey "CDS"; gene "rplW"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1"; locus_tag "C7A06_RS02460"; product "50S ribosomal protein L23"; protein_id "WP_000617544.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2182 NZ_CP027599.1 Protein Homology CDS 482282 482584 . + 0 gene_id "nbis-gene-421"; transcript_id "gene-C7A06_RS02460"; Dbxref "Genbank:WP_000617544.1"; ID "cds-WP_000617544.1"; Name "WP_000617544.1"; Parent "gene-C7A06_RS02460"; gbkey "CDS"; gene "rplW"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1"; locus_tag "C7A06_RS02460"; product "50S ribosomal protein L23"; protein_id "WP_000617544.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2183 NZ_CP027599.1 RefSeq gene 482602 483423 . + . gene_id "nbis-gene-422"; ID "nbis-gene-422"; Name "rplB"; gbkey "Gene"; gene "rplB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02465";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2184 NZ_CP027599.1 RefSeq transcript 482602 483423 . + . gene_id "nbis-gene-422"; transcript_id "gene-C7A06_RS02465"; ID "gene-C7A06_RS02465"; Name "rplB"; Parent "nbis-gene-422"; gbkey "Gene"; gene "rplB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02465"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2185 NZ_CP027599.1 Protein Homology exon 482602 483423 . + . gene_id "nbis-gene-422"; transcript_id "gene-C7A06_RS02465"; Dbxref "Genbank:WP_000301864.1"; ID "nbis-exon-433"; Name "WP_000301864.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS02465"; gbkey "CDS"; gene "rplB"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1"; locus_tag "C7A06_RS02465"; product "50S ribosomal protein L2"; protein_id "WP_000301864.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2186 NZ_CP027599.1 Protein Homology CDS 482602 483423 . + 0 gene_id "nbis-gene-422"; transcript_id "gene-C7A06_RS02465"; Dbxref "Genbank:WP_000301864.1"; ID "cds-WP_000301864.1"; Name "WP_000301864.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS02465"; gbkey "CDS"; gene "rplB"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1"; locus_tag "C7A06_RS02465"; product "50S ribosomal protein L2"; protein_id "WP_000301864.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2187 NZ_CP027599.1 RefSeq gene 483440 483718 . + . gene_id "nbis-gene-423"; ID "nbis-gene-423"; Name "rpsS"; gbkey "Gene"; gene "rpsS"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02470";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2188 NZ_CP027599.1 RefSeq transcript 483440 483718 . + . gene_id "nbis-gene-423"; transcript_id "gene-C7A06_RS02470"; ID "gene-C7A06_RS02470"; Name "rpsS"; Parent "nbis-gene-423"; gbkey "Gene"; gene "rpsS"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02470"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2189 NZ_CP027599.1 Protein Homology exon 483440 483718 . + . gene_id "nbis-gene-423"; transcript_id "gene-C7A06_RS02470"; Dbxref "Genbank:WP_001138117.1"; ID "nbis-exon-434"; Name "WP_001138117.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000314" "GO:0022627"; Parent "gene-C7A06_RS02470"; gbkey "CDS"; gene "rpsS"; go_component "organellar small ribosomal subunit|0000314||IEA" "cytosolic small ribosomal subunit|0022627||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1"; locus_tag "C7A06_RS02470"; product "30S ribosomal protein S19"; protein_id "WP_001138117.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2190 NZ_CP027599.1 Protein Homology CDS 483440 483718 . + 0 gene_id "nbis-gene-423"; transcript_id "gene-C7A06_RS02470"; Dbxref "Genbank:WP_001138117.1"; ID "cds-WP_001138117.1"; Name "WP_001138117.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000314" "GO:0022627"; Parent "gene-C7A06_RS02470"; gbkey "CDS"; gene "rpsS"; go_component "organellar small ribosomal subunit|0000314||IEA" "cytosolic small ribosomal subunit|0022627||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1"; locus_tag "C7A06_RS02470"; product "30S ribosomal protein S19"; protein_id "WP_001138117.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2191 NZ_CP027599.1 RefSeq gene 483733 484065 . + . gene_id "nbis-gene-424"; ID "nbis-gene-424"; Name "rplV"; gbkey "Gene"; gene "rplV"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02475";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2192 NZ_CP027599.1 RefSeq transcript 483733 484065 . + . gene_id "nbis-gene-424"; transcript_id "gene-C7A06_RS02475"; ID "gene-C7A06_RS02475"; Name "rplV"; Parent "nbis-gene-424"; gbkey "Gene"; gene "rplV"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02475"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2193 NZ_CP027599.1 Protein Homology exon 483733 484065 . + . gene_id "nbis-gene-424"; transcript_id "gene-C7A06_RS02475"; Dbxref "Genbank:WP_000447529.1"; ID "nbis-exon-435"; Name "WP_000447529.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000311" "GO:0022625"; Parent "gene-C7A06_RS02475"; gbkey "CDS"; gene "rplV"; go_component "plastid large ribosomal subunit|0000311||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1"; locus_tag "C7A06_RS02475"; product "50S ribosomal protein L22"; protein_id "WP_000447529.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2194 NZ_CP027599.1 Protein Homology CDS 483733 484065 . + 0 gene_id "nbis-gene-424"; transcript_id "gene-C7A06_RS02475"; Dbxref "Genbank:WP_000447529.1"; ID "cds-WP_000447529.1"; Name "WP_000447529.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000311" "GO:0022625"; Parent "gene-C7A06_RS02475"; gbkey "CDS"; gene "rplV"; go_component "plastid large ribosomal subunit|0000311||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1"; locus_tag "C7A06_RS02475"; product "50S ribosomal protein L22"; protein_id "WP_000447529.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2195 NZ_CP027599.1 RefSeq gene 484083 484784 . + . gene_id "nbis-gene-425"; ID "nbis-gene-425"; Name "rpsC"; gbkey "Gene"; gene "rpsC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02480";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2196 NZ_CP027599.1 RefSeq transcript 484083 484784 . + . gene_id "nbis-gene-425"; transcript_id "gene-C7A06_RS02480"; ID "gene-C7A06_RS02480"; Name "rpsC"; Parent "nbis-gene-425"; gbkey "Gene"; gene "rpsC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02480"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2197 NZ_CP027599.1 Protein Homology exon 484083 484784 . + . gene_id "nbis-gene-425"; transcript_id "gene-C7A06_RS02480"; Dbxref "Genbank:WP_000529945.1"; ID "nbis-exon-436"; Name "WP_000529945.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000312" "GO:0022627"; Parent "gene-C7A06_RS02480"; gbkey "CDS"; gene "rpsC"; go_component "plastid small ribosomal subunit|0000312||IEA" "cytosolic small ribosomal subunit|0022627||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1"; locus_tag "C7A06_RS02480"; product "30S ribosomal protein S3"; protein_id "WP_000529945.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2198 NZ_CP027599.1 Protein Homology CDS 484083 484784 . + 0 gene_id "nbis-gene-425"; transcript_id "gene-C7A06_RS02480"; Dbxref "Genbank:WP_000529945.1"; ID "cds-WP_000529945.1"; Name "WP_000529945.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000312" "GO:0022627"; Parent "gene-C7A06_RS02480"; gbkey "CDS"; gene "rpsC"; go_component "plastid small ribosomal subunit|0000312||IEA" "cytosolic small ribosomal subunit|0022627||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1"; locus_tag "C7A06_RS02480"; product "30S ribosomal protein S3"; protein_id "WP_000529945.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2199 NZ_CP027599.1 RefSeq gene 484797 485207 . + . gene_id "nbis-gene-426"; ID "nbis-gene-426"; Name "rplP"; gbkey "Gene"; gene "rplP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02485";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2200 NZ_CP027599.1 RefSeq transcript 484797 485207 . + . gene_id "nbis-gene-426"; transcript_id "gene-C7A06_RS02485"; ID "gene-C7A06_RS02485"; Name "rplP"; Parent "nbis-gene-426"; gbkey "Gene"; gene "rplP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02485"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2201 NZ_CP027599.1 Protein Homology exon 484797 485207 . + . gene_id "nbis-gene-426"; transcript_id "gene-C7A06_RS02485"; Dbxref "Genbank:WP_000941212.1"; ID "nbis-exon-437"; Name "WP_000941212.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS02485"; gbkey "CDS"; gene "rplP"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1"; locus_tag "C7A06_RS02485"; product "50S ribosomal protein L16"; protein_id "WP_000941212.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2202 NZ_CP027599.1 Protein Homology CDS 484797 485207 . + 0 gene_id "nbis-gene-426"; transcript_id "gene-C7A06_RS02485"; Dbxref "Genbank:WP_000941212.1"; ID "cds-WP_000941212.1"; Name "WP_000941212.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS02485"; gbkey "CDS"; gene "rplP"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1"; locus_tag "C7A06_RS02485"; product "50S ribosomal protein L16"; protein_id "WP_000941212.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2203 NZ_CP027599.1 RefSeq gene 485207 485398 . + . gene_id "nbis-gene-427"; ID "nbis-gene-427"; Name "rpmC"; gbkey "Gene"; gene "rpmC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02490";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2204 NZ_CP027599.1 RefSeq transcript 485207 485398 . + . gene_id "nbis-gene-427"; transcript_id "gene-C7A06_RS02490"; ID "gene-C7A06_RS02490"; Name "rpmC"; Parent "nbis-gene-427"; gbkey "Gene"; gene "rpmC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02490"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2205 NZ_CP027599.1 Protein Homology exon 485207 485398 . + . gene_id "nbis-gene-427"; transcript_id "gene-C7A06_RS02490"; Dbxref "Genbank:WP_000644741.1"; ID "nbis-exon-438"; Name "WP_000644741.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS02490"; gbkey "CDS"; gene "rpmC"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1"; locus_tag "C7A06_RS02490"; product "50S ribosomal protein L29"; protein_id "WP_000644741.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2206 NZ_CP027599.1 Protein Homology CDS 485207 485398 . + 0 gene_id "nbis-gene-427"; transcript_id "gene-C7A06_RS02490"; Dbxref "Genbank:WP_000644741.1"; ID "cds-WP_000644741.1"; Name "WP_000644741.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS02490"; gbkey "CDS"; gene "rpmC"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1"; locus_tag "C7A06_RS02490"; product "50S ribosomal protein L29"; protein_id "WP_000644741.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2207 NZ_CP027599.1 RefSeq gene 485398 485652 . + . gene_id "nbis-gene-428"; ID "nbis-gene-428"; Name "rpsQ"; gbkey "Gene"; gene "rpsQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02495";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2208 NZ_CP027599.1 RefSeq transcript 485398 485652 . + . gene_id "nbis-gene-428"; transcript_id "gene-C7A06_RS02495"; ID "gene-C7A06_RS02495"; Name "rpsQ"; Parent "nbis-gene-428"; gbkey "Gene"; gene "rpsQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02495"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2209 NZ_CP027599.1 Protein Homology exon 485398 485652 . + . gene_id "nbis-gene-428"; transcript_id "gene-C7A06_RS02495"; Dbxref "Genbank:WP_000130100.1"; ID "nbis-exon-439"; Name "WP_000130100.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0005840"; Parent "gene-C7A06_RS02495"; gbkey "CDS"; gene "rpsQ"; go_component "ribosome|0005840||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1"; locus_tag "C7A06_RS02495"; product "30S ribosomal protein S17"; protein_id "WP_000130100.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2210 NZ_CP027599.1 Protein Homology CDS 485398 485652 . + 0 gene_id "nbis-gene-428"; transcript_id "gene-C7A06_RS02495"; Dbxref "Genbank:WP_000130100.1"; ID "cds-WP_000130100.1"; Name "WP_000130100.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0005840"; Parent "gene-C7A06_RS02495"; gbkey "CDS"; gene "rpsQ"; go_component "ribosome|0005840||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1"; locus_tag "C7A06_RS02495"; product "30S ribosomal protein S17"; protein_id "WP_000130100.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2211 NZ_CP027599.1 RefSeq gene 485817 486188 . + . gene_id "nbis-gene-429"; ID "nbis-gene-429"; Name "rplN"; gbkey "Gene"; gene "rplN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02500";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2212 NZ_CP027599.1 RefSeq transcript 485817 486188 . + . gene_id "nbis-gene-429"; transcript_id "gene-C7A06_RS02500"; ID "gene-C7A06_RS02500"; Name "rplN"; Parent "nbis-gene-429"; gbkey "Gene"; gene "rplN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02500"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2213 NZ_CP027599.1 Protein Homology exon 485817 486188 . + . gene_id "nbis-gene-429"; transcript_id "gene-C7A06_RS02500"; Dbxref "Genbank:WP_000613955.1"; ID "nbis-exon-440"; Name "WP_000613955.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS02500"; gbkey "CDS"; gene "rplN"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1"; locus_tag "C7A06_RS02500"; product "50S ribosomal protein L14"; protein_id "WP_000613955.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2214 NZ_CP027599.1 Protein Homology CDS 485817 486188 . + 0 gene_id "nbis-gene-429"; transcript_id "gene-C7A06_RS02500"; Dbxref "Genbank:WP_000613955.1"; ID "cds-WP_000613955.1"; Name "WP_000613955.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS02500"; gbkey "CDS"; gene "rplN"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1"; locus_tag "C7A06_RS02500"; product "50S ribosomal protein L14"; protein_id "WP_000613955.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2215 NZ_CP027599.1 RefSeq gene 486199 486513 . + . gene_id "nbis-gene-430"; ID "nbis-gene-430"; Name "rplX"; gbkey "Gene"; gene "rplX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02505";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2216 NZ_CP027599.1 RefSeq transcript 486199 486513 . + . gene_id "nbis-gene-430"; transcript_id "gene-C7A06_RS02505"; ID "gene-C7A06_RS02505"; Name "rplX"; Parent "nbis-gene-430"; gbkey "Gene"; gene "rplX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02505"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2217 NZ_CP027599.1 Protein Homology exon 486199 486513 . + . gene_id "nbis-gene-430"; transcript_id "gene-C7A06_RS02505"; Dbxref "Genbank:WP_000729185.1"; ID "nbis-exon-441"; Name "WP_000729185.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS02505"; gbkey "CDS"; gene "rplX"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1"; locus_tag "C7A06_RS02505"; product "50S ribosomal protein L24"; protein_id "WP_000729185.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2218 NZ_CP027599.1 Protein Homology CDS 486199 486513 . + 0 gene_id "nbis-gene-430"; transcript_id "gene-C7A06_RS02505"; Dbxref "Genbank:WP_000729185.1"; ID "cds-WP_000729185.1"; Name "WP_000729185.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS02505"; gbkey "CDS"; gene "rplX"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1"; locus_tag "C7A06_RS02505"; product "50S ribosomal protein L24"; protein_id "WP_000729185.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2219 NZ_CP027599.1 RefSeq gene 486528 487067 . + . gene_id "nbis-gene-431"; ID "nbis-gene-431"; Name "rplE"; gbkey "Gene"; gene "rplE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02510";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2220 NZ_CP027599.1 RefSeq transcript 486528 487067 . + . gene_id "nbis-gene-431"; transcript_id "gene-C7A06_RS02510"; ID "gene-C7A06_RS02510"; Name "rplE"; Parent "nbis-gene-431"; gbkey "Gene"; gene "rplE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02510"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2221 NZ_CP027599.1 Protein Homology exon 486528 487067 . + . gene_id "nbis-gene-431"; transcript_id "gene-C7A06_RS02510"; Dbxref "Genbank:WP_001096200.1"; ID "nbis-exon-442"; Name "WP_001096200.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0005840"; Parent "gene-C7A06_RS02510"; gbkey "CDS"; gene "rplE"; go_component "ribosome|0005840||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1"; locus_tag "C7A06_RS02510"; product "50S ribosomal protein L5"; protein_id "WP_001096200.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2222 NZ_CP027599.1 Protein Homology CDS 486528 487067 . + 0 gene_id "nbis-gene-431"; transcript_id "gene-C7A06_RS02510"; Dbxref "Genbank:WP_001096200.1"; ID "cds-WP_001096200.1"; Name "WP_001096200.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0005840"; Parent "gene-C7A06_RS02510"; gbkey "CDS"; gene "rplE"; go_component "ribosome|0005840||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1"; locus_tag "C7A06_RS02510"; product "50S ribosomal protein L5"; protein_id "WP_001096200.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2223 NZ_CP027599.1 RefSeq gene 487082 487387 . + . gene_id "nbis-gene-432"; ID "nbis-gene-432"; Name "rpsN"; gbkey "Gene"; gene "rpsN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02515";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2224 NZ_CP027599.1 RefSeq transcript 487082 487387 . + . gene_id "nbis-gene-432"; transcript_id "gene-C7A06_RS02515"; ID "gene-C7A06_RS02515"; Name "rpsN"; Parent "nbis-gene-432"; gbkey "Gene"; gene "rpsN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02515"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2225 NZ_CP027599.1 Protein Homology exon 487082 487387 . + . gene_id "nbis-gene-432"; transcript_id "gene-C7A06_RS02515"; Dbxref "Genbank:WP_001118930.1"; ID "nbis-exon-443"; Name "WP_001118930.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0005840"; Parent "gene-C7A06_RS02515"; gbkey "CDS"; gene "rpsN"; go_component "ribosome|0005840||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1"; locus_tag "C7A06_RS02515"; product "30S ribosomal protein S14"; protein_id "WP_001118930.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2226 NZ_CP027599.1 Protein Homology CDS 487082 487387 . + 0 gene_id "nbis-gene-432"; transcript_id "gene-C7A06_RS02515"; Dbxref "Genbank:WP_001118930.1"; ID "cds-WP_001118930.1"; Name "WP_001118930.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0005840"; Parent "gene-C7A06_RS02515"; gbkey "CDS"; gene "rpsN"; go_component "ribosome|0005840||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1"; locus_tag "C7A06_RS02515"; product "30S ribosomal protein S14"; protein_id "WP_001118930.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2227 NZ_CP027599.1 RefSeq gene 487421 487813 . + . gene_id "nbis-gene-433"; ID "nbis-gene-433"; Name "rpsH"; gbkey "Gene"; gene "rpsH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02520";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2228 NZ_CP027599.1 RefSeq transcript 487421 487813 . + . gene_id "nbis-gene-433"; transcript_id "gene-C7A06_RS02520"; ID "gene-C7A06_RS02520"; Name "rpsH"; Parent "nbis-gene-433"; gbkey "Gene"; gene "rpsH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02520"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2229 NZ_CP027599.1 Protein Homology exon 487421 487813 . + . gene_id "nbis-gene-433"; transcript_id "gene-C7A06_RS02520"; Dbxref "Genbank:WP_000062611.1"; ID "nbis-exon-444"; Name "WP_000062611.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0005840"; Parent "gene-C7A06_RS02520"; gbkey "CDS"; gene "rpsH"; go_component "ribosome|0005840||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1"; locus_tag "C7A06_RS02520"; product "30S ribosomal protein S8"; protein_id "WP_000062611.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2230 NZ_CP027599.1 Protein Homology CDS 487421 487813 . + 0 gene_id "nbis-gene-433"; transcript_id "gene-C7A06_RS02520"; Dbxref "Genbank:WP_000062611.1"; ID "cds-WP_000062611.1"; Name "WP_000062611.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0005840"; Parent "gene-C7A06_RS02520"; gbkey "CDS"; gene "rpsH"; go_component "ribosome|0005840||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1"; locus_tag "C7A06_RS02520"; product "30S ribosomal protein S8"; protein_id "WP_000062611.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2231 NZ_CP027599.1 RefSeq gene 487826 488359 . + . gene_id "nbis-gene-434"; ID "nbis-gene-434"; Name "rplF"; gbkey "Gene"; gene "rplF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02525";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2232 NZ_CP027599.1 RefSeq transcript 487826 488359 . + . gene_id "nbis-gene-434"; transcript_id "gene-C7A06_RS02525"; ID "gene-C7A06_RS02525"; Name "rplF"; Parent "nbis-gene-434"; gbkey "Gene"; gene "rplF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02525"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2233 NZ_CP027599.1 Protein Homology exon 487826 488359 . + . gene_id "nbis-gene-434"; transcript_id "gene-C7A06_RS02525"; Dbxref "Genbank:WP_000091945.1"; ID "nbis-exon-445"; Name "WP_000091945.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0019843" "GO:0022625"; Parent "gene-C7A06_RS02525"; gbkey "CDS"; gene "rplF"; go_component "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA" "rRNA binding|0019843||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1"; locus_tag "C7A06_RS02525"; product "50S ribosomal protein L6"; protein_id "WP_000091945.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2234 NZ_CP027599.1 Protein Homology CDS 487826 488359 . + 0 gene_id "nbis-gene-434"; transcript_id "gene-C7A06_RS02525"; Dbxref "Genbank:WP_000091945.1"; ID "cds-WP_000091945.1"; Name "WP_000091945.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0019843" "GO:0022625"; Parent "gene-C7A06_RS02525"; gbkey "CDS"; gene "rplF"; go_component "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA" "rRNA binding|0019843||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1"; locus_tag "C7A06_RS02525"; product "50S ribosomal protein L6"; protein_id "WP_000091945.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2235 NZ_CP027599.1 RefSeq gene 488369 488722 . + . gene_id "nbis-gene-435"; ID "nbis-gene-435"; Name "rplR"; gbkey "Gene"; gene "rplR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02530";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2236 NZ_CP027599.1 RefSeq transcript 488369 488722 . + . gene_id "nbis-gene-435"; transcript_id "gene-C7A06_RS02530"; ID "gene-C7A06_RS02530"; Name "rplR"; Parent "nbis-gene-435"; gbkey "Gene"; gene "rplR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02530"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2237 NZ_CP027599.1 Protein Homology exon 488369 488722 . + . gene_id "nbis-gene-435"; transcript_id "gene-C7A06_RS02530"; Dbxref "Genbank:WP_000358960.1"; ID "nbis-exon-446"; Name "WP_000358960.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS02530"; gbkey "CDS"; gene "rplR"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1"; locus_tag "C7A06_RS02530"; product "50S ribosomal protein L18"; protein_id "WP_000358960.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2238 NZ_CP027599.1 Protein Homology CDS 488369 488722 . + 0 gene_id "nbis-gene-435"; transcript_id "gene-C7A06_RS02530"; Dbxref "Genbank:WP_000358960.1"; ID "cds-WP_000358960.1"; Name "WP_000358960.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS02530"; gbkey "CDS"; gene "rplR"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1"; locus_tag "C7A06_RS02530"; product "50S ribosomal protein L18"; protein_id "WP_000358960.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2239 NZ_CP027599.1 RefSeq gene 488737 489240 . + . gene_id "nbis-gene-436"; ID "nbis-gene-436"; Name "rpsE"; gbkey "Gene"; gene "rpsE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02535";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2240 NZ_CP027599.1 RefSeq transcript 488737 489240 . + . gene_id "nbis-gene-436"; transcript_id "gene-C7A06_RS02535"; ID "gene-C7A06_RS02535"; Name "rpsE"; Parent "nbis-gene-436"; gbkey "Gene"; gene "rpsE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02535"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2241 NZ_CP027599.1 Protein Homology exon 488737 489240 . + . gene_id "nbis-gene-436"; transcript_id "gene-C7A06_RS02535"; Dbxref "Genbank:WP_000940121.1"; ID "nbis-exon-447"; Name "WP_000940121.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000312" "GO:0022627"; Parent "gene-C7A06_RS02535"; gbkey "CDS"; gene "rpsE"; go_component "plastid small ribosomal subunit|0000312||IEA" "cytosolic small ribosomal subunit|0022627||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1"; locus_tag "C7A06_RS02535"; product "30S ribosomal protein S5"; protein_id "WP_000940121.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2242 NZ_CP027599.1 Protein Homology CDS 488737 489240 . + 0 gene_id "nbis-gene-436"; transcript_id "gene-C7A06_RS02535"; Dbxref "Genbank:WP_000940121.1"; ID "cds-WP_000940121.1"; Name "WP_000940121.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000312" "GO:0022627"; Parent "gene-C7A06_RS02535"; gbkey "CDS"; gene "rpsE"; go_component "plastid small ribosomal subunit|0000312||IEA" "cytosolic small ribosomal subunit|0022627||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1"; locus_tag "C7A06_RS02535"; product "30S ribosomal protein S5"; protein_id "WP_000940121.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2243 NZ_CP027599.1 RefSeq gene 489244 489423 . + . gene_id "nbis-gene-437"; ID "nbis-gene-437"; Name "rpmD"; gbkey "Gene"; gene "rpmD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02540";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2244 NZ_CP027599.1 RefSeq transcript 489244 489423 . + . gene_id "nbis-gene-437"; transcript_id "gene-C7A06_RS02540"; ID "gene-C7A06_RS02540"; Name "rpmD"; Parent "nbis-gene-437"; gbkey "Gene"; gene "rpmD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02540"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2245 NZ_CP027599.1 Protein Homology exon 489244 489423 . + . gene_id "nbis-gene-437"; transcript_id "gene-C7A06_RS02540"; Dbxref "Genbank:WP_001140433.1"; ID "nbis-exon-448"; Name "WP_001140433.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS02540"; gbkey "CDS"; gene "rpmD"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1"; locus_tag "C7A06_RS02540"; product "50S ribosomal protein L30"; protein_id "WP_001140433.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2246 NZ_CP027599.1 Protein Homology CDS 489244 489423 . + 0 gene_id "nbis-gene-437"; transcript_id "gene-C7A06_RS02540"; Dbxref "Genbank:WP_001140433.1"; ID "cds-WP_001140433.1"; Name "WP_001140433.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS02540"; gbkey "CDS"; gene "rpmD"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1"; locus_tag "C7A06_RS02540"; product "50S ribosomal protein L30"; protein_id "WP_001140433.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2247 NZ_CP027599.1 RefSeq gene 489427 489861 . + . gene_id "nbis-gene-438"; ID "nbis-gene-438"; Name "rplO"; gbkey "Gene"; gene "rplO"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02545";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2248 NZ_CP027599.1 RefSeq transcript 489427 489861 . + . gene_id "nbis-gene-438"; transcript_id "gene-C7A06_RS02545"; ID "gene-C7A06_RS02545"; Name "rplO"; Parent "nbis-gene-438"; gbkey "Gene"; gene "rplO"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02545"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2249 NZ_CP027599.1 Protein Homology exon 489427 489861 . + . gene_id "nbis-gene-438"; transcript_id "gene-C7A06_RS02545"; Dbxref "Genbank:WP_001238917.1"; ID "nbis-exon-449"; Name "WP_001238917.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS02545"; gbkey "CDS"; gene "rplO"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1"; locus_tag "C7A06_RS02545"; product "50S ribosomal protein L15"; protein_id "WP_001238917.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2250 NZ_CP027599.1 Protein Homology CDS 489427 489861 . + 0 gene_id "nbis-gene-438"; transcript_id "gene-C7A06_RS02545"; Dbxref "Genbank:WP_001238917.1"; ID "cds-WP_001238917.1"; Name "WP_001238917.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS02545"; gbkey "CDS"; gene "rplO"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1"; locus_tag "C7A06_RS02545"; product "50S ribosomal protein L15"; protein_id "WP_001238917.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2251 NZ_CP027599.1 RefSeq gene 489869 491200 . + . gene_id "nbis-gene-439"; ID "nbis-gene-439"; Name "secY"; gbkey "Gene"; gene "secY"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02550";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2252 NZ_CP027599.1 RefSeq transcript 489869 491200 . + . gene_id "nbis-gene-439"; transcript_id "gene-C7A06_RS02550"; ID "gene-C7A06_RS02550"; Name "secY"; Parent "nbis-gene-439"; gbkey "Gene"; gene "secY"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02550"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2253 NZ_CP027599.1 Protein Homology exon 489869 491200 . + . gene_id "nbis-gene-439"; transcript_id "gene-C7A06_RS02550"; Dbxref "Genbank:WP_001118861.1"; ID "nbis-exon-450"; Name "WP_001118861.1"; Ontology_term "GO:0043952" "GO:0015450" "GO:0005887"; Parent "gene-C7A06_RS02550"; gbkey "CDS"; gene "secY"; go_component "integral component of plasma membrane|0005887||IEA"; go_function "protein-transporting ATPase activity|0015450||IEA"; go_process "protein transport by the Sec complex|0043952||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1"; locus_tag "C7A06_RS02550"; product "preprotein translocase subunit SecY"; protein_id "WP_001118861.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2254 NZ_CP027599.1 Protein Homology CDS 489869 491200 . + 0 gene_id "nbis-gene-439"; transcript_id "gene-C7A06_RS02550"; Dbxref "Genbank:WP_001118861.1"; ID "cds-WP_001118861.1"; Name "WP_001118861.1"; Ontology_term "GO:0043952" "GO:0015450" "GO:0005887"; Parent "gene-C7A06_RS02550"; gbkey "CDS"; gene "secY"; go_component "integral component of plasma membrane|0005887||IEA"; go_function "protein-transporting ATPase activity|0015450||IEA"; go_process "protein transport by the Sec complex|0043952||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1"; locus_tag "C7A06_RS02550"; product "preprotein translocase subunit SecY"; protein_id "WP_001118861.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2255 NZ_CP027599.1 RefSeq gene 491232 491348 . + . gene_id "nbis-gene-440"; ID "nbis-gene-440"; Name "rpmJ"; gbkey "Gene"; gene "rpmJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02555";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2256 NZ_CP027599.1 RefSeq transcript 491232 491348 . + . gene_id "nbis-gene-440"; transcript_id "gene-C7A06_RS02555"; ID "gene-C7A06_RS02555"; Name "rpmJ"; Parent "nbis-gene-440"; gbkey "Gene"; gene "rpmJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02555"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2257 NZ_CP027599.1 Protein Homology exon 491232 491348 . + . gene_id "nbis-gene-440"; transcript_id "gene-C7A06_RS02555"; Dbxref "Genbank:WP_000868187.1"; ID "nbis-exon-451"; Name "WP_000868187.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0005840"; Parent "gene-C7A06_RS02555"; gbkey "CDS"; gene "rpmJ"; go_component "ribosome|0005840||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1"; locus_tag "C7A06_RS02555"; product "50S ribosomal protein L36"; protein_id "WP_000868187.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2258 NZ_CP027599.1 Protein Homology CDS 491232 491348 . + 0 gene_id "nbis-gene-440"; transcript_id "gene-C7A06_RS02555"; Dbxref "Genbank:WP_000868187.1"; ID "cds-WP_000868187.1"; Name "WP_000868187.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0005840"; Parent "gene-C7A06_RS02555"; gbkey "CDS"; gene "rpmJ"; go_component "ribosome|0005840||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1"; locus_tag "C7A06_RS02555"; product "50S ribosomal protein L36"; protein_id "WP_000868187.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2259 NZ_CP027599.1 RefSeq gene 491495 491851 . + . gene_id "nbis-gene-441"; ID "nbis-gene-441"; Name "rpsM"; gbkey "Gene"; gene "rpsM"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02560";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2260 NZ_CP027599.1 RefSeq transcript 491495 491851 . + . gene_id "nbis-gene-441"; transcript_id "gene-C7A06_RS02560"; ID "gene-C7A06_RS02560"; Name "rpsM"; Parent "nbis-gene-441"; gbkey "Gene"; gene "rpsM"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02560"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2261 NZ_CP027599.1 Protein Homology exon 491495 491851 . + . gene_id "nbis-gene-441"; transcript_id "gene-C7A06_RS02560"; Dbxref "Genbank:WP_000090775.1"; ID "nbis-exon-452"; Name "WP_000090775.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0022627"; Parent "gene-C7A06_RS02560"; gbkey "CDS"; gene "rpsM"; go_component "cytosolic small ribosomal subunit|0022627||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1"; locus_tag "C7A06_RS02560"; product "30S ribosomal protein S13"; protein_id "WP_000090775.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2262 NZ_CP027599.1 Protein Homology CDS 491495 491851 . + 0 gene_id "nbis-gene-441"; transcript_id "gene-C7A06_RS02560"; Dbxref "Genbank:WP_000090775.1"; ID "cds-WP_000090775.1"; Name "WP_000090775.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0022627"; Parent "gene-C7A06_RS02560"; gbkey "CDS"; gene "rpsM"; go_component "cytosolic small ribosomal subunit|0022627||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1"; locus_tag "C7A06_RS02560"; product "30S ribosomal protein S13"; protein_id "WP_000090775.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2263 NZ_CP027599.1 RefSeq gene 491868 492257 . + . gene_id "nbis-gene-442"; ID "nbis-gene-442"; Name "rpsK"; gbkey "Gene"; gene "rpsK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02565";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2264 NZ_CP027599.1 RefSeq transcript 491868 492257 . + . gene_id "nbis-gene-442"; transcript_id "gene-C7A06_RS02565"; ID "gene-C7A06_RS02565"; Name "rpsK"; Parent "nbis-gene-442"; gbkey "Gene"; gene "rpsK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02565"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2265 NZ_CP027599.1 Protein Homology exon 491868 492257 . + . gene_id "nbis-gene-442"; transcript_id "gene-C7A06_RS02565"; Dbxref "Genbank:WP_001029684.1"; ID "nbis-exon-453"; Name "WP_001029684.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0005840"; Parent "gene-C7A06_RS02565"; gbkey "CDS"; gene "rpsK"; go_component "ribosome|0005840||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1"; locus_tag "C7A06_RS02565"; product "30S ribosomal protein S11"; protein_id "WP_001029684.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2266 NZ_CP027599.1 Protein Homology CDS 491868 492257 . + 0 gene_id "nbis-gene-442"; transcript_id "gene-C7A06_RS02565"; Dbxref "Genbank:WP_001029684.1"; ID "cds-WP_001029684.1"; Name "WP_001029684.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0005840"; Parent "gene-C7A06_RS02565"; gbkey "CDS"; gene "rpsK"; go_component "ribosome|0005840||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1"; locus_tag "C7A06_RS02565"; product "30S ribosomal protein S11"; protein_id "WP_001029684.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2267 NZ_CP027599.1 RefSeq gene 492291 492911 . + . gene_id "nbis-gene-443"; ID "nbis-gene-443"; Name "rpsD"; gbkey "Gene"; gene "rpsD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02570";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2268 NZ_CP027599.1 RefSeq transcript 492291 492911 . + . gene_id "nbis-gene-443"; transcript_id "gene-C7A06_RS02570"; ID "gene-C7A06_RS02570"; Name "rpsD"; Parent "nbis-gene-443"; gbkey "Gene"; gene "rpsD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02570"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2269 NZ_CP027599.1 Protein Homology exon 492291 492911 . + . gene_id "nbis-gene-443"; transcript_id "gene-C7A06_RS02570"; Dbxref "Genbank:WP_000135224.1"; ID "nbis-exon-454"; Name "WP_000135224.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0019843" "GO:0015935"; Parent "gene-C7A06_RS02570"; gbkey "CDS"; gene "rpsD"; go_component "small ribosomal subunit|0015935||IEA"; go_function "structural constituent of ribosome|0003735||IEA" "rRNA binding|0019843||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1"; locus_tag "C7A06_RS02570"; product "30S ribosomal protein S4"; protein_id "WP_000135224.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2270 NZ_CP027599.1 Protein Homology CDS 492291 492911 . + 0 gene_id "nbis-gene-443"; transcript_id "gene-C7A06_RS02570"; Dbxref "Genbank:WP_000135224.1"; ID "cds-WP_000135224.1"; Name "WP_000135224.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0019843" "GO:0015935"; Parent "gene-C7A06_RS02570"; gbkey "CDS"; gene "rpsD"; go_component "small ribosomal subunit|0015935||IEA"; go_function "structural constituent of ribosome|0003735||IEA" "rRNA binding|0019843||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1"; locus_tag "C7A06_RS02570"; product "30S ribosomal protein S4"; protein_id "WP_000135224.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2271 NZ_CP027599.1 RefSeq gene 492937 493926 . + . gene_id "nbis-gene-444"; ID "nbis-gene-444"; Name "rpoA"; gbkey "Gene"; gene "rpoA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02575";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2272 NZ_CP027599.1 RefSeq transcript 492937 493926 . + . gene_id "nbis-gene-444"; transcript_id "gene-C7A06_RS02575"; ID "gene-C7A06_RS02575"; Name "rpoA"; Parent "nbis-gene-444"; gbkey "Gene"; gene "rpoA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02575"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2273 NZ_CP027599.1 Protein Homology exon 492937 493926 . + . gene_id "nbis-gene-444"; transcript_id "gene-C7A06_RS02575"; Dbxref "Genbank:WP_001162094.1"; ID "nbis-exon-455"; Name "WP_001162094.1"; Ontology_term "GO:0006351" "GO:0003677" "GO:0003899" "GO:0046983"; Parent "gene-C7A06_RS02575"; gbkey "CDS"; gene "rpoA"; go_function "DNA binding|0003677||IEA" "DNA-directed 5'-3' RNA polymerase activity|0003899||IEA" "protein dimerization activity|0046983||IEA"; go_process "transcription, DNA-templated|0006351||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1"; locus_tag "C7A06_RS02575"; product "DNA-directed RNA polymerase subunit alpha"; protein_id "WP_001162094.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2274 NZ_CP027599.1 Protein Homology CDS 492937 493926 . + 0 gene_id "nbis-gene-444"; transcript_id "gene-C7A06_RS02575"; Dbxref "Genbank:WP_001162094.1"; ID "cds-WP_001162094.1"; Name "WP_001162094.1"; Ontology_term "GO:0006351" "GO:0003677" "GO:0003899" "GO:0046983"; Parent "gene-C7A06_RS02575"; gbkey "CDS"; gene "rpoA"; go_function "DNA binding|0003677||IEA" "DNA-directed 5'-3' RNA polymerase activity|0003899||IEA" "protein dimerization activity|0046983||IEA"; go_process "transcription, DNA-templated|0006351||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1"; locus_tag "C7A06_RS02575"; product "DNA-directed RNA polymerase subunit alpha"; protein_id "WP_001162094.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2275 NZ_CP027599.1 RefSeq gene 493967 494350 . + . gene_id "nbis-gene-445"; ID "nbis-gene-445"; Name "rplQ"; gbkey "Gene"; gene "rplQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02580";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2276 NZ_CP027599.1 RefSeq transcript 493967 494350 . + . gene_id "nbis-gene-445"; transcript_id "gene-C7A06_RS02580"; ID "gene-C7A06_RS02580"; Name "rplQ"; Parent "nbis-gene-445"; gbkey "Gene"; gene "rplQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02580"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2277 NZ_CP027599.1 Protein Homology exon 493967 494350 . + . gene_id "nbis-gene-445"; transcript_id "gene-C7A06_RS02580"; Dbxref "Genbank:WP_001216368.1"; ID "nbis-exon-456"; Name "WP_001216368.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0005762" "GO:0022625"; Parent "gene-C7A06_RS02580"; gbkey "CDS"; gene "rplQ"; go_component "mitochondrial large ribosomal subunit|0005762||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312186.1"; locus_tag "C7A06_RS02580"; product "50S ribosomal protein L17"; protein_id "WP_001216368.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2278 NZ_CP027599.1 Protein Homology CDS 493967 494350 . + 0 gene_id "nbis-gene-445"; transcript_id "gene-C7A06_RS02580"; Dbxref "Genbank:WP_001216368.1"; ID "cds-WP_001216368.1"; Name "WP_001216368.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0005762" "GO:0022625"; Parent "gene-C7A06_RS02580"; gbkey "CDS"; gene "rplQ"; go_component "mitochondrial large ribosomal subunit|0005762||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312186.1"; locus_tag "C7A06_RS02580"; product "50S ribosomal protein L17"; protein_id "WP_001216368.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2279 NZ_CP027599.1 RefSeq gene 494457 494825 . + . gene_id "nbis-gene-446"; ID "nbis-gene-446"; Name "yhdN"; gbkey "Gene"; gene "yhdN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02585";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2280 NZ_CP027599.1 RefSeq transcript 494457 494825 . + . gene_id "nbis-gene-446"; transcript_id "gene-C7A06_RS02585"; ID "gene-C7A06_RS02585"; Name "yhdN"; Parent "nbis-gene-446"; gbkey "Gene"; gene "yhdN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02585"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2281 NZ_CP027599.1 Protein Homology exon 494457 494825 . + . gene_id "nbis-gene-446"; transcript_id "gene-C7A06_RS02585"; Dbxref "Genbank:WP_000266492.1"; ID "nbis-exon-457"; Name "WP_000266492.1"; Parent "gene-C7A06_RS02585"; gbkey "CDS"; gene "yhdN"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417752.1"; locus_tag "C7A06_RS02585"; product "DUF1992 domain-containing protein"; protein_id "WP_000266492.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2282 NZ_CP027599.1 Protein Homology CDS 494457 494825 . + 0 gene_id "nbis-gene-446"; transcript_id "gene-C7A06_RS02585"; Dbxref "Genbank:WP_000266492.1"; ID "cds-WP_000266492.1"; Name "WP_000266492.1"; Parent "gene-C7A06_RS02585"; gbkey "CDS"; gene "yhdN"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417752.1"; locus_tag "C7A06_RS02585"; product "DUF1992 domain-containing protein"; protein_id "WP_000266492.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2283 NZ_CP027599.1 RefSeq gene 494836 495261 . + . gene_id "nbis-gene-447"; ID "nbis-gene-447"; Name "zntR"; gbkey "Gene"; gene "zntR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02590";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2284 NZ_CP027599.1 RefSeq transcript 494836 495261 . + . gene_id "nbis-gene-447"; transcript_id "gene-C7A06_RS02590"; ID "gene-C7A06_RS02590"; Name "zntR"; Parent "nbis-gene-447"; gbkey "Gene"; gene "zntR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02590"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2285 NZ_CP027599.1 Protein Homology exon 494836 495261 . + . gene_id "nbis-gene-447"; transcript_id "gene-C7A06_RS02590"; Dbxref "Genbank:WP_000285607.1"; ID "nbis-exon-458"; Name "WP_000285607.1"; Ontology_term "GO:0006355" "GO:0003677"; Parent "gene-C7A06_RS02590"; gbkey "CDS"; gene "zntR"; go_function "DNA binding|0003677||IEA"; go_process "regulation of transcription, DNA-templated|0006355||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312184.1"; locus_tag "C7A06_RS02590"; product "Zn(2+)-responsive transcriptional regulator"; protein_id "WP_000285607.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2286 NZ_CP027599.1 Protein Homology CDS 494836 495261 . + 0 gene_id "nbis-gene-447"; transcript_id "gene-C7A06_RS02590"; Dbxref "Genbank:WP_000285607.1"; ID "cds-WP_000285607.1"; Name "WP_000285607.1"; Ontology_term "GO:0006355" "GO:0003677"; Parent "gene-C7A06_RS02590"; gbkey "CDS"; gene "zntR"; go_function "DNA binding|0003677||IEA"; go_process "regulation of transcription, DNA-templated|0006355||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312184.1"; locus_tag "C7A06_RS02590"; product "Zn(2+)-responsive transcriptional regulator"; protein_id "WP_000285607.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2287 NZ_CP027599.1 RefSeq gene 495317 495535 . + . gene_id "nbis-gene-448"; ID "nbis-gene-448"; Name "arfA"; gbkey "Gene"; gene "arfA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02595";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2288 NZ_CP027599.1 RefSeq transcript 495317 495535 . + . gene_id "nbis-gene-448"; transcript_id "gene-C7A06_RS02595"; ID "gene-C7A06_RS02595"; Name "arfA"; Parent "nbis-gene-448"; gbkey "Gene"; gene "arfA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02595"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2289 NZ_CP027599.1 Protein Homology exon 495317 495535 . + . gene_id "nbis-gene-448"; transcript_id "gene-C7A06_RS02595"; Dbxref "Genbank:WP_000092696.1"; ID "nbis-exon-459"; Name "WP_000092696.1"; Parent "gene-C7A06_RS02595"; gbkey "CDS"; gene "arfA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_588467.1"; locus_tag "C7A06_RS02595"; product "alternative ribosome-rescue factor ArfA"; protein_id "WP_000092696.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2290 NZ_CP027599.1 Protein Homology CDS 495317 495535 . + 0 gene_id "nbis-gene-448"; transcript_id "gene-C7A06_RS02595"; Dbxref "Genbank:WP_000092696.1"; ID "cds-WP_000092696.1"; Name "WP_000092696.1"; Parent "gene-C7A06_RS02595"; gbkey "CDS"; gene "arfA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_588467.1"; locus_tag "C7A06_RS02595"; product "alternative ribosome-rescue factor ArfA"; protein_id "WP_000092696.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2291 NZ_CP027599.1 RefSeq gene 495532 495942 . - . gene_id "nbis-gene-449"; ID "nbis-gene-449"; Name "mscL"; gbkey "Gene"; gene "mscL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02600";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2292 NZ_CP027599.1 RefSeq transcript 495532 495942 . - . gene_id "nbis-gene-449"; transcript_id "gene-C7A06_RS02600"; ID "gene-C7A06_RS02600"; Name "mscL"; Parent "nbis-gene-449"; gbkey "Gene"; gene "mscL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02600"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2293 NZ_CP027599.1 Protein Homology exon 495532 495942 . - . gene_id "nbis-gene-449"; transcript_id "gene-C7A06_RS02600"; Dbxref "Genbank:WP_000022439.1"; ID "nbis-exon-460"; Name "WP_000022439.1"; Parent "gene-C7A06_RS02600"; gbkey "CDS"; gene "mscL"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312183.1"; locus_tag "C7A06_RS02600"; product "large-conductance mechanosensitive channel protein MscL"; protein_id "WP_000022439.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2294 NZ_CP027599.1 Protein Homology CDS 495532 495942 . - 0 gene_id "nbis-gene-449"; transcript_id "gene-C7A06_RS02600"; Dbxref "Genbank:WP_000022439.1"; ID "cds-WP_000022439.1"; Name "WP_000022439.1"; Parent "gene-C7A06_RS02600"; gbkey "CDS"; gene "mscL"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312183.1"; locus_tag "C7A06_RS02600"; product "large-conductance mechanosensitive channel protein MscL"; protein_id "WP_000022439.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2295 NZ_CP027599.1 RefSeq gene 496072 497448 . - . gene_id "nbis-gene-450"; ID "nbis-gene-450"; Name "trkA"; gbkey "Gene"; gene "trkA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02605";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2296 NZ_CP027599.1 RefSeq transcript 496072 497448 . - . gene_id "nbis-gene-450"; transcript_id "gene-C7A06_RS02605"; ID "gene-C7A06_RS02605"; Name "trkA"; Parent "nbis-gene-450"; gbkey "Gene"; gene "trkA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02605"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2297 NZ_CP027599.1 Protein Homology exon 496072 497448 . - . gene_id "nbis-gene-450"; transcript_id "gene-C7A06_RS02605"; Dbxref "Genbank:WP_000691382.1"; ID "nbis-exon-461"; Name "WP_000691382.1"; Ontology_term "GO:0006813" "GO:0015079" "GO:0016020"; Parent "gene-C7A06_RS02605"; gbkey "CDS"; gene "trkA"; go_component "membrane|0016020||IEA"; go_function "potassium ion transmembrane transporter activity|0015079||IEA"; go_process "potassium ion transport|0006813||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1"; locus_tag "C7A06_RS02605"; product "Trk system potassium transporter TrkA"; protein_id "WP_000691382.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2298 NZ_CP027599.1 Protein Homology CDS 496072 497448 . - 0 gene_id "nbis-gene-450"; transcript_id "gene-C7A06_RS02605"; Dbxref "Genbank:WP_000691382.1"; ID "cds-WP_000691382.1"; Name "WP_000691382.1"; Ontology_term "GO:0006813" "GO:0015079" "GO:0016020"; Parent "gene-C7A06_RS02605"; gbkey "CDS"; gene "trkA"; go_component "membrane|0016020||IEA"; go_function "potassium ion transmembrane transporter activity|0015079||IEA"; go_process "potassium ion transport|0006813||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1"; locus_tag "C7A06_RS02605"; product "Trk system potassium transporter TrkA"; protein_id "WP_000691382.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2299 NZ_CP027599.1 RefSeq gene 497470 498759 . - . gene_id "nbis-gene-451"; ID "nbis-gene-451"; Name "rsmB"; gbkey "Gene"; gene "rsmB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02610";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2300 NZ_CP027599.1 RefSeq transcript 497470 498759 . - . gene_id "nbis-gene-451"; transcript_id "gene-C7A06_RS02610"; ID "gene-C7A06_RS02610"; Name "rsmB"; Parent "nbis-gene-451"; gbkey "Gene"; gene "rsmB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02610"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2301 NZ_CP027599.1 Protein Homology exon 497470 498759 . - . gene_id "nbis-gene-451"; transcript_id "gene-C7A06_RS02610"; Dbxref "Genbank:WP_000744775.1"; ID "nbis-exon-462"; Name "WP_000744775.1"; Ontology_term "GO:0001510" "GO:0006355" "GO:0006364" "GO:0003723" "GO:0008649"; Parent "gene-C7A06_RS02610"; gbkey "CDS"; gene "rsmB"; go_function "RNA binding|0003723||IEA" "rRNA methyltransferase activity|0008649||IEA"; go_process "RNA methylation|0001510||IEA" "regulation of transcription, DNA-templated|0006355||IEA" "rRNA processing|0006364||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417747.1"; locus_tag "C7A06_RS02610"; product "16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB"; protein_id "WP_000744775.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2302 NZ_CP027599.1 Protein Homology CDS 497470 498759 . - 0 gene_id "nbis-gene-451"; transcript_id "gene-C7A06_RS02610"; Dbxref "Genbank:WP_000744775.1"; ID "cds-WP_000744775.1"; Name "WP_000744775.1"; Ontology_term "GO:0001510" "GO:0006355" "GO:0006364" "GO:0003723" "GO:0008649"; Parent "gene-C7A06_RS02610"; gbkey "CDS"; gene "rsmB"; go_function "RNA binding|0003723||IEA" "rRNA methyltransferase activity|0008649||IEA"; go_process "RNA methylation|0001510||IEA" "regulation of transcription, DNA-templated|0006355||IEA" "rRNA processing|0006364||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417747.1"; locus_tag "C7A06_RS02610"; product "16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB"; protein_id "WP_000744775.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2303 NZ_CP027599.1 RefSeq gene 498805 499752 . - . gene_id "nbis-gene-452"; ID "nbis-gene-452"; Name "fmt"; gbkey "Gene"; gene "fmt"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02615";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2304 NZ_CP027599.1 RefSeq transcript 498805 499752 . - . gene_id "nbis-gene-452"; transcript_id "gene-C7A06_RS02615"; ID "gene-C7A06_RS02615"; Name "fmt"; Parent "nbis-gene-452"; gbkey "Gene"; gene "fmt"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02615"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2305 NZ_CP027599.1 Protein Homology exon 498805 499752 . - . gene_id "nbis-gene-452"; transcript_id "gene-C7A06_RS02615"; Dbxref "Genbank:WP_000004477.1"; ID "nbis-exon-463"; Name "WP_000004477.1"; Ontology_term "GO:0006431" "GO:0004479" "GO:0005737"; Parent "gene-C7A06_RS02615"; gbkey "CDS"; gene "fmt"; go_component "cytoplasm|0005737||IEA"; go_function "methionyl-tRNA formyltransferase activity|0004479||IEA"; go_process "methionyl-tRNA aminoacylation|0006431||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312180.1"; locus_tag "C7A06_RS02615"; product "methionyl-tRNA formyltransferase"; protein_id "WP_000004477.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2306 NZ_CP027599.1 Protein Homology CDS 498805 499752 . - 0 gene_id "nbis-gene-452"; transcript_id "gene-C7A06_RS02615"; Dbxref "Genbank:WP_000004477.1"; ID "cds-WP_000004477.1"; Name "WP_000004477.1"; Ontology_term "GO:0006431" "GO:0004479" "GO:0005737"; Parent "gene-C7A06_RS02615"; gbkey "CDS"; gene "fmt"; go_component "cytoplasm|0005737||IEA"; go_function "methionyl-tRNA formyltransferase activity|0004479||IEA"; go_process "methionyl-tRNA aminoacylation|0006431||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312180.1"; locus_tag "C7A06_RS02615"; product "methionyl-tRNA formyltransferase"; protein_id "WP_000004477.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2307 NZ_CP027599.1 RefSeq gene 499767 500276 . - . gene_id "nbis-gene-453"; ID "nbis-gene-453"; Name "def"; gbkey "Gene"; gene "def"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02620";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2308 NZ_CP027599.1 RefSeq transcript 499767 500276 . - . gene_id "nbis-gene-453"; transcript_id "gene-C7A06_RS02620"; ID "gene-C7A06_RS02620"; Name "def"; Parent "nbis-gene-453"; gbkey "Gene"; gene "def"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02620"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2309 NZ_CP027599.1 Protein Homology exon 499767 500276 . - . gene_id "nbis-gene-453"; transcript_id "gene-C7A06_RS02620"; Dbxref "Genbank:WP_000114986.1"; ID "nbis-exon-464"; Name "WP_000114986.1"; Ontology_term "GO:0006464" "GO:0042586"; Parent "gene-C7A06_RS02620"; gbkey "CDS"; gene "def"; go_function "peptide deformylase activity|0042586||IEA"; go_process "cellular protein modification process|0006464||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709074.1"; locus_tag "C7A06_RS02620"; product "peptide deformylase"; protein_id "WP_000114986.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2310 NZ_CP027599.1 Protein Homology CDS 499767 500276 . - 0 gene_id "nbis-gene-453"; transcript_id "gene-C7A06_RS02620"; Dbxref "Genbank:WP_000114986.1"; ID "cds-WP_000114986.1"; Name "WP_000114986.1"; Ontology_term "GO:0006464" "GO:0042586"; Parent "gene-C7A06_RS02620"; gbkey "CDS"; gene "def"; go_function "peptide deformylase activity|0042586||IEA"; go_process "cellular protein modification process|0006464||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709074.1"; locus_tag "C7A06_RS02620"; product "peptide deformylase"; protein_id "WP_000114986.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
2311 NZ_CP027599.1 RefSeq gene 500406 501530 . + . gene_id "nbis-gene-454"; ID "nbis-gene-454"; Name "dprA"; gbkey "Gene"; gene "dprA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02625";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2312 NZ_CP027599.1 RefSeq transcript 500406 501530 . + . gene_id "nbis-gene-454"; transcript_id "gene-C7A06_RS02625"; ID "gene-C7A06_RS02625"; Name "dprA"; Parent "nbis-gene-454"; gbkey "Gene"; gene "dprA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02625"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2313 NZ_CP027599.1 Protein Homology exon 500406 501530 . + . gene_id "nbis-gene-454"; transcript_id "gene-C7A06_RS02625"; Dbxref "Genbank:WP_000228529.1"; ID "nbis-exon-465"; Name "WP_000228529.1"; Ontology_term "GO:0009294"; Parent "gene-C7A06_RS02625"; gbkey "CDS"; gene "dprA"; go_process "DNA-mediated transformation|0009294||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026211.1"; locus_tag "C7A06_RS02625"; product "DNA-protecting protein DprA"; protein_id "WP_000228529.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2314 NZ_CP027599.1 Protein Homology CDS 500406 501530 . + 0 gene_id "nbis-gene-454"; transcript_id "gene-C7A06_RS02625"; Dbxref "Genbank:WP_000228529.1"; ID "cds-WP_000228529.1"; Name "WP_000228529.1"; Ontology_term "GO:0009294"; Parent "gene-C7A06_RS02625"; gbkey "CDS"; gene "dprA"; go_process "DNA-mediated transformation|0009294||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026211.1"; locus_tag "C7A06_RS02625"; product "DNA-protecting protein DprA"; protein_id "WP_000228529.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2315 NZ_CP027599.1 RefSeq gene 501502 501975 . + . gene_id "nbis-gene-455"; ID "nbis-gene-455"; Name "smg"; gbkey "Gene"; gene "smg"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02630";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
2316 NZ_CP027599.1 RefSeq transcript 501502 501975 . + . gene_id "nbis-gene-455"; transcript_id "gene-C7A06_RS02630"; ID "gene-C7A06_RS02630"; Name "smg"; Parent "nbis-gene-455"; gbkey "Gene"; gene "smg"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02630"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2317 NZ_CP027599.1 Protein Homology exon 501502 501975 . + . gene_id "nbis-gene-455"; transcript_id "gene-C7A06_RS02630"; Dbxref "Genbank:WP_000460672.1"; ID "nbis-exon-466"; Name "WP_000460672.1"; Parent "gene-C7A06_RS02630"; gbkey "CDS"; gene "smg"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1"; locus_tag "C7A06_RS02630"; product "DUF494 family protein Smg"; protein_id "WP_000460672.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2318 NZ_CP027599.1 Protein Homology CDS 501502 501975 . + 0 gene_id "nbis-gene-455"; transcript_id "gene-C7A06_RS02630"; Dbxref "Genbank:WP_000460672.1"; ID "cds-WP_000460672.1"; Name "WP_000460672.1"; Parent "gene-C7A06_RS02630"; gbkey "CDS"; gene "smg"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1"; locus_tag "C7A06_RS02630"; product "DUF494 family protein Smg"; protein_id "WP_000460672.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
2319 NZ_CP027599.1 RefSeq gene 502004 502546 . + . gene_id "nbis-gene-456"; ID "nbis-gene-456"; Name "yrdD"; gbkey "Gene"; gene "yrdD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02635";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2320 NZ_CP027599.1 RefSeq transcript 502004 502546 . + . gene_id "nbis-gene-456"; transcript_id "gene-C7A06_RS02635"; ID "gene-C7A06_RS02635"; Name "yrdD"; Parent "nbis-gene-456"; gbkey "Gene"; gene "yrdD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02635"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
2321 NZ_CP027599.1 Protein Homology exon 502004 502546 . + . gene_id "nbis-gene-456"; transcript_id "gene-C7A06_RS02635"; Dbxref "Genbank:WP_001129719.1"; ID "nbis-exon-467"; Name "WP_001129719.1"; Ontology_term "GO:0006265" "GO:0003677" "GO:0003916" "GO:0005694"; Parent "gene-C7A06_RS02635"; gbkey "CDS"; gene "yrdD"; go_component "chromosome|0005694||IEA"; go_function "DNA binding|0003677||IEA" "DNA topoisomerase activity|0003916||IEA"; go_process "DNA topological change|0006265||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026210.1"; locus_tag "C7A06_RS02635"; product "topoisomerase DNA-binding C4 zinc finger domain-containing protein"; protein_id "WP_001129719.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
2322 NZ_CP027599.1 Protein Homology CDS 502004 502546 . + 0 gene_id "nbis-gene-456"; transcript_id "gene-C7A06_RS02635"; Dbxref "Genbank:WP_001129719.1"; ID "cds-WP_001129719.1"; Name "WP_001129719.1"; Ontology_term "GO:0006265" "GO:0003677" "GO:0003916" "GO:0005694"; Parent "gene-C7A06_RS02635"; gbkey "CDS"; gene "yrdD"; go_component "chromosome|0005694||IEA"; go_function "DNA binding|0003677||IEA" "DNA topoisomerase activity|0003916||IEA"; go_process "DNA topological change|0006265||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026210.1"; locus_tag "C7A06_RS02635"; product "topoisomerase DNA-binding C4 zinc finger domain-containing protein"; protein_id "WP_001129719.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
2323 NZ_CP027599.1 RefSeq gene 502551 503123 . + . gene_id "nbis-gene-457"; ID "nbis-gene-457"; Name "tsaC"; gbkey "Gene"; gene "tsaC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02640";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2324 NZ_CP027599.1 RefSeq transcript 502551 503123 . + . gene_id "nbis-gene-457"; transcript_id "gene-C7A06_RS02640"; ID "gene-C7A06_RS02640"; Name "tsaC"; Parent "nbis-gene-457"; gbkey "Gene"; gene "tsaC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02640"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
2325 NZ_CP027599.1 Protein Homology exon 502551 503123 . + . gene_id "nbis-gene-457"; transcript_id "gene-C7A06_RS02640"; Dbxref "Genbank:WP_001297709.1"; ID "nbis-exon-468"; Name "WP_001297709.1"; Ontology_term "GO:0002949" "GO:0003725" "GO:0005524"; Parent "gene-C7A06_RS02640"; gbkey "CDS"; gene "tsaC"; go_function "double-stranded RNA binding|0003725||IEA" "ATP binding|0005524||IEA"; go_process "tRNA threonylcarbamoyladenosine modification|0002949||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312175.1"; locus_tag "C7A06_RS02640"; product "L-threonylcarbamoyladenylate synthase type 1 TsaC"; protein_id "WP_001297709.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2326 NZ_CP027599.1 Protein Homology CDS 502551 503123 . + 0 gene_id "nbis-gene-457"; transcript_id "gene-C7A06_RS02640"; Dbxref "Genbank:WP_001297709.1"; ID "cds-WP_001297709.1"; Name "WP_001297709.1"; Ontology_term "GO:0002949" "GO:0003725" "GO:0005524"; Parent "gene-C7A06_RS02640"; gbkey "CDS"; gene "tsaC"; go_function "double-stranded RNA binding|0003725||IEA" "ATP binding|0005524||IEA"; go_process "tRNA threonylcarbamoyladenosine modification|0002949||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312175.1"; locus_tag "C7A06_RS02640"; product "L-threonylcarbamoyladenylate synthase type 1 TsaC"; protein_id "WP_001297709.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
2327 NZ_CP027599.1 RefSeq gene 503128 503946 . + . gene_id "nbis-gene-458"; ID "nbis-gene-458"; Name "aroE"; gbkey "Gene"; gene "aroE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02645";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
2328 NZ_CP027599.1 RefSeq transcript 503128 503946 . + . gene_id "nbis-gene-458"; transcript_id "gene-C7A06_RS02645"; ID "gene-C7A06_RS02645"; Name "aroE"; Parent "nbis-gene-458"; gbkey "Gene"; gene "aroE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02645"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
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diff changeset
2329 NZ_CP027599.1 Protein Homology exon 503128 503946 . + . gene_id "nbis-gene-458"; transcript_id "gene-C7A06_RS02645"; Dbxref "Genbank:WP_000451211.1"; ID "nbis-exon-469"; Name "WP_000451211.1"; Ontology_term "GO:0019632" "GO:0004764"; Parent "gene-C7A06_RS02645"; gbkey "CDS"; gene "aroE"; go_function "shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA"; go_process "shikimate metabolic process|0019632||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709069.2"; locus_tag "C7A06_RS02645"; product "shikimate dehydrogenase"; protein_id "WP_000451211.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
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parents:
diff changeset
2330 NZ_CP027599.1 Protein Homology CDS 503128 503946 . + 0 gene_id "nbis-gene-458"; transcript_id "gene-C7A06_RS02645"; Dbxref "Genbank:WP_000451211.1"; ID "cds-WP_000451211.1"; Name "WP_000451211.1"; Ontology_term "GO:0019632" "GO:0004764"; Parent "gene-C7A06_RS02645"; gbkey "CDS"; gene "aroE"; go_function "shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA"; go_process "shikimate metabolic process|0019632||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709069.2"; locus_tag "C7A06_RS02645"; product "shikimate dehydrogenase"; protein_id "WP_000451211.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2331 NZ_CP027599.1 RefSeq gene 503943 504200 . + . gene_id "nbis-gene-459"; ID "nbis-gene-459"; Name "yrdB"; gbkey "Gene"; gene "yrdB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02650";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2332 NZ_CP027599.1 RefSeq transcript 503943 504200 . + . gene_id "nbis-gene-459"; transcript_id "gene-C7A06_RS02650"; ID "gene-C7A06_RS02650"; Name "yrdB"; Parent "nbis-gene-459"; gbkey "Gene"; gene "yrdB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02650"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2333 NZ_CP027599.1 Protein Homology exon 503943 504200 . + . gene_id "nbis-gene-459"; transcript_id "gene-C7A06_RS02650"; Dbxref "Genbank:WP_001070563.1"; ID "nbis-exon-470"; Name "WP_001070563.1"; Parent "gene-C7A06_RS02650"; gbkey "CDS"; gene "yrdB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417739.1"; locus_tag "C7A06_RS02650"; product "DUF1488 domain-containing protein"; protein_id "WP_001070563.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2334 NZ_CP027599.1 Protein Homology CDS 503943 504200 . + 0 gene_id "nbis-gene-459"; transcript_id "gene-C7A06_RS02650"; Dbxref "Genbank:WP_001070563.1"; ID "cds-WP_001070563.1"; Name "WP_001070563.1"; Parent "gene-C7A06_RS02650"; gbkey "CDS"; gene "yrdB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417739.1"; locus_tag "C7A06_RS02650"; product "DUF1488 domain-containing protein"; protein_id "WP_001070563.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2335 NZ_CP027599.1 RefSeq gene 504176 504730 . - . gene_id "nbis-gene-460"; ID "nbis-gene-460"; Name "yrdA"; gbkey "Gene"; gene "yrdA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02655";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2336 NZ_CP027599.1 RefSeq transcript 504176 504730 . - . gene_id "nbis-gene-460"; transcript_id "gene-C7A06_RS02655"; ID "gene-C7A06_RS02655"; Name "yrdA"; Parent "nbis-gene-460"; gbkey "Gene"; gene "yrdA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02655"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2337 NZ_CP027599.1 Protein Homology exon 504176 504730 . - . gene_id "nbis-gene-460"; transcript_id "gene-C7A06_RS02655"; Dbxref "Genbank:WP_001286216.1"; ID "nbis-exon-471"; Name "WP_001286216.1"; Parent "gene-C7A06_RS02655"; gbkey "CDS"; gene "yrdA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417738.4"; locus_tag "C7A06_RS02655"; product "gamma carbonic anhydrase family protein"; protein_id "WP_001286216.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2338 NZ_CP027599.1 Protein Homology CDS 504176 504730 . - 0 gene_id "nbis-gene-460"; transcript_id "gene-C7A06_RS02655"; Dbxref "Genbank:WP_001286216.1"; ID "cds-WP_001286216.1"; Name "WP_001286216.1"; Parent "gene-C7A06_RS02655"; gbkey "CDS"; gene "yrdA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417738.4"; locus_tag "C7A06_RS02655"; product "gamma carbonic anhydrase family protein"; protein_id "WP_001286216.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2339 NZ_CP027599.1 RefSeq gene 505203 506744 . + . gene_id "gene-C7A06_RS02665"; ID "gene-C7A06_RS02665"; Name "C7A06_RS02665"; gbkey "Gene"; gene_biotype "rRNA"; locus_tag "C7A06_RS02665";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2340 NZ_CP027599.1 cmsearch transcript 505203 506744 . + . gene_id "gene-C7A06_RS02665"; transcript_id "rna-C7A06_RS02665"; Dbxref "RFAM:RF00177"; ID "rna-C7A06_RS02665"; Parent "gene-C7A06_RS02665"; gbkey "rRNA"; inference "COORDINATES: profile:INFERNAL:1.1.1"; locus_tag "C7A06_RS02665"; original_biotype "rrna"; product "16S ribosomal RNA";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2341 NZ_CP027599.1 cmsearch exon 505203 506744 . + . gene_id "gene-C7A06_RS02665"; transcript_id "rna-C7A06_RS02665"; Dbxref "RFAM:RF00177"; ID "exon-C7A06_RS02665-1"; Parent "rna-C7A06_RS02665"; gbkey "rRNA"; inference "COORDINATES: profile:INFERNAL:1.1.1"; locus_tag "C7A06_RS02665"; product "16S ribosomal RNA";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2342 NZ_CP027599.1 RefSeq gene 506813 506889 . + . gene_id "gene-C7A06_RS02670"; ID "gene-C7A06_RS02670"; Name "C7A06_RS02670"; gbkey "Gene"; gene_biotype "tRNA"; locus_tag "C7A06_RS02670";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2343 NZ_CP027599.1 tRNAscan-SE transcript 506813 506889 . + . gene_id "gene-C7A06_RS02670"; transcript_id "rna-C7A06_RS02670"; ID "rna-C7A06_RS02670"; Parent "gene-C7A06_RS02670"; anticodon "(pos:506847..506849)"; gbkey "tRNA"; inference "COORDINATES: profile:tRNAscan-SE:2.0.7"; locus_tag "C7A06_RS02670"; original_biotype "trna"; product "tRNA-Ile";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2344 NZ_CP027599.1 tRNAscan-SE exon 506813 506889 . + . gene_id "gene-C7A06_RS02670"; transcript_id "rna-C7A06_RS02670"; ID "exon-C7A06_RS02670-1"; Parent "rna-C7A06_RS02670"; anticodon "(pos:506847..506849)"; gbkey "tRNA"; inference "COORDINATES: profile:tRNAscan-SE:2.0.7"; locus_tag "C7A06_RS02670"; product "tRNA-Ile";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2345 NZ_CP027599.1 RefSeq gene 506932 507007 . + . gene_id "gene-C7A06_RS02675"; ID "gene-C7A06_RS02675"; Name "C7A06_RS02675"; gbkey "Gene"; gene_biotype "tRNA"; locus_tag "C7A06_RS02675";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2346 NZ_CP027599.1 tRNAscan-SE transcript 506932 507007 . + . gene_id "gene-C7A06_RS02675"; transcript_id "rna-C7A06_RS02675"; ID "rna-C7A06_RS02675"; Parent "gene-C7A06_RS02675"; anticodon "(pos:506965..506967)"; gbkey "tRNA"; inference "COORDINATES: profile:tRNAscan-SE:2.0.7"; locus_tag "C7A06_RS02675"; original_biotype "trna"; product "tRNA-Ala";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2347 NZ_CP027599.1 tRNAscan-SE exon 506932 507007 . + . gene_id "gene-C7A06_RS02675"; transcript_id "rna-C7A06_RS02675"; ID "exon-C7A06_RS02675-1"; Parent "rna-C7A06_RS02675"; anticodon "(pos:506965..506967)"; gbkey "tRNA"; inference "COORDINATES: profile:tRNAscan-SE:2.0.7"; locus_tag "C7A06_RS02675"; product "tRNA-Ala";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2348 NZ_CP027599.1 RefSeq gene 507191 510094 . + . gene_id "gene-C7A06_RS02680"; ID "gene-C7A06_RS02680"; Name "C7A06_RS02680"; gbkey "Gene"; gene_biotype "rRNA"; locus_tag "C7A06_RS02680";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2349 NZ_CP027599.1 cmsearch transcript 507191 510094 . + . gene_id "gene-C7A06_RS02680"; transcript_id "rna-C7A06_RS02680"; Dbxref "RFAM:RF02541"; ID "rna-C7A06_RS02680"; Parent "gene-C7A06_RS02680"; gbkey "rRNA"; inference "COORDINATES: profile:INFERNAL:1.1.1"; locus_tag "C7A06_RS02680"; original_biotype "rrna"; product "23S ribosomal RNA";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2350 NZ_CP027599.1 cmsearch exon 507191 510094 . + . gene_id "gene-C7A06_RS02680"; transcript_id "rna-C7A06_RS02680"; Dbxref "RFAM:RF02541"; ID "exon-C7A06_RS02680-1"; Parent "rna-C7A06_RS02680"; gbkey "rRNA"; inference "COORDINATES: profile:INFERNAL:1.1.1"; locus_tag "C7A06_RS02680"; product "23S ribosomal RNA";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2351 NZ_CP027599.1 RefSeq gene 510189 510304 . + . gene_id "gene-C7A06_RS02685"; ID "gene-C7A06_RS02685"; Name "rrf"; gbkey "Gene"; gene "rrf"; gene_biotype "rRNA"; locus_tag "C7A06_RS02685";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2352 NZ_CP027599.1 cmsearch transcript 510189 510304 . + . gene_id "gene-C7A06_RS02685"; transcript_id "rna-C7A06_RS02685"; Dbxref "RFAM:RF00001"; ID "rna-C7A06_RS02685"; Parent "gene-C7A06_RS02685"; gbkey "rRNA"; gene "rrf"; inference "COORDINATES: profile:INFERNAL:1.1.1"; locus_tag "C7A06_RS02685"; original_biotype "rrna"; product "5S ribosomal RNA";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2353 NZ_CP027599.1 cmsearch exon 510189 510304 . + . gene_id "gene-C7A06_RS02685"; transcript_id "rna-C7A06_RS02685"; Dbxref "RFAM:RF00001"; ID "exon-C7A06_RS02685-1"; Parent "rna-C7A06_RS02685"; gbkey "rRNA"; gene "rrf"; inference "COORDINATES: profile:INFERNAL:1.1.1"; locus_tag "C7A06_RS02685"; product "5S ribosomal RNA";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2354 NZ_CP027599.1 RefSeq gene 510319 510394 . + . gene_id "gene-C7A06_RS02690"; ID "gene-C7A06_RS02690"; Name "C7A06_RS02690"; gbkey "Gene"; gene_biotype "tRNA"; locus_tag "C7A06_RS02690";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2355 NZ_CP027599.1 tRNAscan-SE transcript 510319 510394 . + . gene_id "gene-C7A06_RS02690"; transcript_id "rna-C7A06_RS02690"; ID "rna-C7A06_RS02690"; Parent "gene-C7A06_RS02690"; anticodon "(pos:510352..510354)"; gbkey "tRNA"; inference "COORDINATES: profile:tRNAscan-SE:2.0.7"; locus_tag "C7A06_RS02690"; original_biotype "trna"; product "tRNA-Thr";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2356 NZ_CP027599.1 tRNAscan-SE exon 510319 510394 . + . gene_id "gene-C7A06_RS02690"; transcript_id "rna-C7A06_RS02690"; ID "exon-C7A06_RS02690-1"; Parent "rna-C7A06_RS02690"; anticodon "(pos:510352..510354)"; gbkey "tRNA"; inference "COORDINATES: profile:tRNAscan-SE:2.0.7"; locus_tag "C7A06_RS02690"; product "tRNA-Thr";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2357 NZ_CP027599.1 RefSeq gene 510434 510549 . + . gene_id "gene-C7A06_RS02695"; ID "gene-C7A06_RS02695"; Name "rrf"; gbkey "Gene"; gene "rrf"; gene_biotype "rRNA"; locus_tag "C7A06_RS02695";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2358 NZ_CP027599.1 cmsearch transcript 510434 510549 . + . gene_id "gene-C7A06_RS02695"; transcript_id "rna-C7A06_RS02695"; Dbxref "RFAM:RF00001"; ID "rna-C7A06_RS02695"; Parent "gene-C7A06_RS02695"; gbkey "rRNA"; gene "rrf"; inference "COORDINATES: profile:INFERNAL:1.1.1"; locus_tag "C7A06_RS02695"; original_biotype "rrna"; product "5S ribosomal RNA";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2359 NZ_CP027599.1 cmsearch exon 510434 510549 . + . gene_id "gene-C7A06_RS02695"; transcript_id "rna-C7A06_RS02695"; Dbxref "RFAM:RF00001"; ID "exon-C7A06_RS02695-1"; Parent "rna-C7A06_RS02695"; gbkey "rRNA"; gene "rrf"; inference "COORDINATES: profile:INFERNAL:1.1.1"; locus_tag "C7A06_RS02695"; product "5S ribosomal RNA";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2360 NZ_CP027599.1 RefSeq gene 510613 511371 . - . gene_id "nbis-gene-461"; ID "nbis-gene-461"; Name "yhdZ"; gbkey "Gene"; gene "yhdZ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02700";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2361 NZ_CP027599.1 RefSeq transcript 510613 511371 . - . gene_id "nbis-gene-461"; transcript_id "gene-C7A06_RS02700"; ID "gene-C7A06_RS02700"; Name "yhdZ"; Parent "nbis-gene-461"; gbkey "Gene"; gene "yhdZ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02700"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2362 NZ_CP027599.1 Protein Homology exon 510613 511371 . - . gene_id "nbis-gene-461"; transcript_id "gene-C7A06_RS02700"; Dbxref "Genbank:WP_000078339.1"; ID "nbis-exon-472"; Name "WP_000078339.1"; Parent "gene-C7A06_RS02700"; gbkey "CDS"; gene "yhdZ"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312171.1"; locus_tag "C7A06_RS02700"; product "amino acid ABC transporter ATP-binding protein"; protein_id "WP_000078339.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2363 NZ_CP027599.1 Protein Homology CDS 510613 511371 . - 0 gene_id "nbis-gene-461"; transcript_id "gene-C7A06_RS02700"; Dbxref "Genbank:WP_000078339.1"; ID "cds-WP_000078339.1"; Name "WP_000078339.1"; Parent "gene-C7A06_RS02700"; gbkey "CDS"; gene "yhdZ"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312171.1"; locus_tag "C7A06_RS02700"; product "amino acid ABC transporter ATP-binding protein"; protein_id "WP_000078339.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2364 NZ_CP027599.1 RefSeq gene 511379 512482 . - . gene_id "nbis-gene-462"; ID "nbis-gene-462"; Name "yhdY"; gbkey "Gene"; gene "yhdY"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02705";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2365 NZ_CP027599.1 RefSeq transcript 511379 512482 . - . gene_id "nbis-gene-462"; transcript_id "gene-C7A06_RS02705"; ID "gene-C7A06_RS02705"; Name "yhdY"; Parent "nbis-gene-462"; gbkey "Gene"; gene "yhdY"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02705"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2366 NZ_CP027599.1 Protein Homology exon 511379 512482 . - . gene_id "nbis-gene-462"; transcript_id "gene-C7A06_RS02705"; Dbxref "Genbank:WP_001297685.1"; ID "nbis-exon-473"; Name "WP_001297685.1"; Parent "gene-C7A06_RS02705"; gbkey "CDS"; gene "yhdY"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709065.2"; locus_tag "C7A06_RS02705"; product "amino acid ABC transporter permease"; protein_id "WP_001297685.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2367 NZ_CP027599.1 Protein Homology CDS 511379 512482 . - 0 gene_id "nbis-gene-462"; transcript_id "gene-C7A06_RS02705"; Dbxref "Genbank:WP_001297685.1"; ID "cds-WP_001297685.1"; Name "WP_001297685.1"; Parent "gene-C7A06_RS02705"; gbkey "CDS"; gene "yhdY"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709065.2"; locus_tag "C7A06_RS02705"; product "amino acid ABC transporter permease"; protein_id "WP_001297685.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2368 NZ_CP027599.1 RefSeq gene 512492 513286 . - . gene_id "nbis-pseudogene-12"; ID "nbis-pseudogene-12"; Name "C7A06_RS02710"; end_range "513286" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS02710"; original_biotype "pseudogene"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2369 NZ_CP027599.1 RefSeq transcript 512492 513286 . - . gene_id "nbis-pseudogene-12"; transcript_id "gene-C7A06_RS02710"; ID "gene-C7A06_RS02710"; Name "C7A06_RS02710"; Parent "nbis-pseudogene-12"; end_range "513286" "."; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS02710"; original_biotype "mrna"; partial "true"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2370 NZ_CP027599.1 Protein Homology exon 512492 513286 . - . gene_id "nbis-pseudogene-12"; transcript_id "gene-C7A06_RS02710"; ID "nbis-exon-474"; Note "incomplete; partial in the middle of a contig; missing N-terminus"; Ontology_term "GO:0055085" "GO:0016020"; Parent "gene-C7A06_RS02710"; end_range "513286" "."; gbkey "CDS"; go_component "membrane|0016020||IEA"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026209.1"; locus_tag "C7A06_RS02710"; partial "true"; product "ABC transporter permease subunit"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2371 NZ_CP027599.1 Protein Homology CDS 512492 513286 . - 0 gene_id "nbis-pseudogene-12"; transcript_id "gene-C7A06_RS02710"; ID "cds-C7A06_RS02710"; Note "incomplete; partial in the middle of a contig; missing N-terminus"; Ontology_term "GO:0055085" "GO:0016020"; Parent "gene-C7A06_RS02710"; end_range "513286" "."; gbkey "CDS"; go_component "membrane|0016020||IEA"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:YP_026209.1"; locus_tag "C7A06_RS02710"; partial "true"; product "ABC transporter permease subunit"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2372 NZ_CP027599.1 RefSeq gene 513328 514541 . - . gene_id "nbis-gene-463"; ID "nbis-gene-463"; Name "C7A06_RS02715"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02715";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2373 NZ_CP027599.1 RefSeq transcript 513328 514541 . - . gene_id "nbis-gene-463"; transcript_id "gene-C7A06_RS02715"; ID "gene-C7A06_RS02715"; Name "C7A06_RS02715"; Parent "nbis-gene-463"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02715"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2374 NZ_CP027599.1 Protein Homology exon 513328 514541 . - . gene_id "nbis-gene-463"; transcript_id "gene-C7A06_RS02715"; Dbxref "Genbank:WP_162829202.1"; ID "nbis-exon-475"; Name "WP_162829202.1"; Note "programmed frameshift"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS02715"; exception "ribosomal slippage"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_086558238.1"; locus_tag "C7A06_RS02715"; product "IS3 family transposase"; protein_id "WP_162829202.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2375 NZ_CP027599.1 Protein Homology CDS 513328 514541 . - 2 gene_id "nbis-gene-463"; transcript_id "gene-C7A06_RS02715"; Dbxref "Genbank:WP_162829202.1"; ID "cds-WP_162829202.1"; Name "WP_162829202.1"; Note "programmed frameshift"; Ontology_term "GO:0004803"; Parent "gene-C7A06_RS02715"; exception "ribosomal slippage"; gbkey "CDS"; go_function "transposase activity|0004803||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_086558238.1"; locus_tag "C7A06_RS02715"; product "IS3 family transposase"; protein_id "WP_162829202.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2376 NZ_CP027599.1 RefSeq gene 514596 514985 . - . gene_id "nbis-pseudogene-13"; ID "nbis-pseudogene-13"; Name "C7A06_RS02720"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS02720"; original_biotype "pseudogene"; partial "true"; pseudo "true"; start_range "." "514596";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2377 NZ_CP027599.1 RefSeq transcript 514596 514985 . - . gene_id "nbis-pseudogene-13"; transcript_id "gene-C7A06_RS02720"; ID "gene-C7A06_RS02720"; Name "C7A06_RS02720"; Parent "nbis-pseudogene-13"; gbkey "Gene"; gene_biotype "pseudogene"; locus_tag "C7A06_RS02720"; original_biotype "mrna"; partial "true"; pseudo "true"; start_range "." "514596";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2378 NZ_CP027599.1 Protein Homology exon 514596 514985 . - . gene_id "nbis-pseudogene-13"; transcript_id "gene-C7A06_RS02720"; ID "nbis-exon-476"; Note "incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS02720"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312169.2"; locus_tag "C7A06_RS02720"; partial "true"; product "amino acid ABC transporter permease"; pseudo "true"; start_range "." "514596"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2379 NZ_CP027599.1 Protein Homology CDS 514596 514985 . - 0 gene_id "nbis-pseudogene-13"; transcript_id "gene-C7A06_RS02720"; ID "cds-C7A06_RS02720"; Note "incomplete; partial in the middle of a contig; missing C-terminus"; Parent "gene-C7A06_RS02720"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312169.2"; locus_tag "C7A06_RS02720"; partial "true"; product "amino acid ABC transporter permease"; pseudo "true"; start_range "." "514596"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2380 NZ_CP027599.1 RefSeq gene 515053 516078 . - . gene_id "nbis-gene-464"; ID "nbis-gene-464"; Name "C7A06_RS02725"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02725";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2381 NZ_CP027599.1 RefSeq transcript 515053 516078 . - . gene_id "nbis-gene-464"; transcript_id "gene-C7A06_RS02725"; ID "gene-C7A06_RS02725"; Name "C7A06_RS02725"; Parent "nbis-gene-464"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02725"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2382 NZ_CP027599.1 Protein Homology exon 515053 516078 . - . gene_id "nbis-gene-464"; transcript_id "gene-C7A06_RS02725"; Dbxref "Genbank:WP_000738579.1"; ID "nbis-exon-477"; Name "WP_000738579.1"; Parent "gene-C7A06_RS02725"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005121390.1"; locus_tag "C7A06_RS02725"; product "amino acid ABC transporter substrate-binding protein"; protein_id "WP_000738579.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2383 NZ_CP027599.1 Protein Homology CDS 515053 516078 . - 0 gene_id "nbis-gene-464"; transcript_id "gene-C7A06_RS02725"; Dbxref "Genbank:WP_000738579.1"; ID "cds-WP_000738579.1"; Name "WP_000738579.1"; Parent "gene-C7A06_RS02725"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005121390.1"; locus_tag "C7A06_RS02725"; product "amino acid ABC transporter substrate-binding protein"; protein_id "WP_000738579.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2384 NZ_CP027599.1 RefSeq gene 516509 516730 . - . gene_id "nbis-gene-465"; ID "nbis-gene-465"; Name "C7A06_RS02735"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02735";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2385 NZ_CP027599.1 RefSeq transcript 516509 516730 . - . gene_id "nbis-gene-465"; transcript_id "gene-C7A06_RS02735"; ID "gene-C7A06_RS02735"; Name "C7A06_RS02735"; Parent "nbis-gene-465"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02735"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2386 NZ_CP027599.1 Protein Homology exon 516509 516730 . - . gene_id "nbis-gene-465"; transcript_id "gene-C7A06_RS02735"; Dbxref "Genbank:WP_000825639.1"; ID "nbis-exon-478"; Name "WP_000825639.1"; Parent "gene-C7A06_RS02735"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312167.1"; locus_tag "C7A06_RS02735"; product "membrane protein"; protein_id "WP_000825639.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2387 NZ_CP027599.1 Protein Homology CDS 516509 516730 . - 0 gene_id "nbis-gene-465"; transcript_id "gene-C7A06_RS02735"; Dbxref "Genbank:WP_000825639.1"; ID "cds-WP_000825639.1"; Name "WP_000825639.1"; Parent "gene-C7A06_RS02735"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312167.1"; locus_tag "C7A06_RS02735"; product "membrane protein"; protein_id "WP_000825639.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2388 NZ_CP027599.1 RefSeq gene 516983 520087 . - . gene_id "nbis-gene-466"; ID "nbis-gene-466"; Name "acrF"; gbkey "Gene"; gene "acrF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02740";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2389 NZ_CP027599.1 RefSeq transcript 516983 520087 . - . gene_id "nbis-gene-466"; transcript_id "gene-C7A06_RS02740"; ID "gene-C7A06_RS02740"; Name "acrF"; Parent "nbis-gene-466"; gbkey "Gene"; gene "acrF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02740"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2390 NZ_CP027599.1 Protein Homology exon 516983 520087 . - . gene_id "nbis-gene-466"; transcript_id "gene-C7A06_RS02740"; Dbxref "Genbank:WP_001273218.1"; ID "nbis-exon-479"; Name "WP_001273218.1"; Parent "gene-C7A06_RS02740"; gbkey "CDS"; gene "acrF"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417732.1"; locus_tag "C7A06_RS02740"; product "multidrug efflux RND transporter permease subunit AcrF"; protein_id "WP_001273218.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2391 NZ_CP027599.1 Protein Homology CDS 516983 520087 . - 0 gene_id "nbis-gene-466"; transcript_id "gene-C7A06_RS02740"; Dbxref "Genbank:WP_001273218.1"; ID "cds-WP_001273218.1"; Name "WP_001273218.1"; Parent "gene-C7A06_RS02740"; gbkey "CDS"; gene "acrF"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417732.1"; locus_tag "C7A06_RS02740"; product "multidrug efflux RND transporter permease subunit AcrF"; protein_id "WP_001273218.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2392 NZ_CP027599.1 RefSeq gene 520099 521256 . - . gene_id "nbis-gene-467"; ID "nbis-gene-467"; Name "acrE"; gbkey "Gene"; gene "acrE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02745";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2393 NZ_CP027599.1 RefSeq transcript 520099 521256 . - . gene_id "nbis-gene-467"; transcript_id "gene-C7A06_RS02745"; ID "gene-C7A06_RS02745"; Name "acrE"; Parent "nbis-gene-467"; gbkey "Gene"; gene "acrE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02745"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2394 NZ_CP027599.1 Protein Homology exon 520099 521256 . - . gene_id "nbis-gene-467"; transcript_id "gene-C7A06_RS02745"; Dbxref "Genbank:WP_000160334.1"; ID "nbis-exon-480"; Name "WP_000160334.1"; Parent "gene-C7A06_RS02745"; gbkey "CDS"; gene "acrE"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417731.1"; locus_tag "C7A06_RS02745"; product "multidrug efflux RND transporter periplasmic adaptor subunit AcrE"; protein_id "WP_000160334.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2395 NZ_CP027599.1 Protein Homology CDS 520099 521256 . - 0 gene_id "nbis-gene-467"; transcript_id "gene-C7A06_RS02745"; Dbxref "Genbank:WP_000160334.1"; ID "cds-WP_000160334.1"; Name "WP_000160334.1"; Parent "gene-C7A06_RS02745"; gbkey "CDS"; gene "acrE"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417731.1"; locus_tag "C7A06_RS02745"; product "multidrug efflux RND transporter periplasmic adaptor subunit AcrE"; protein_id "WP_000160334.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2396 NZ_CP027599.1 RefSeq gene 521655 522317 . + . gene_id "nbis-gene-468"; ID "nbis-gene-468"; Name "acrS"; gbkey "Gene"; gene "acrS"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02755";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2397 NZ_CP027599.1 RefSeq transcript 521655 522317 . + . gene_id "nbis-gene-468"; transcript_id "gene-C7A06_RS02755"; ID "gene-C7A06_RS02755"; Name "acrS"; Parent "nbis-gene-468"; gbkey "Gene"; gene "acrS"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02755"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2398 NZ_CP027599.1 Protein Homology exon 521655 522317 . + . gene_id "nbis-gene-468"; transcript_id "gene-C7A06_RS02755"; Dbxref "Genbank:WP_001129522.1"; ID "nbis-exon-481"; Name "WP_001129522.1"; Parent "gene-C7A06_RS02755"; gbkey "CDS"; gene "acrS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312163.1"; locus_tag "C7A06_RS02755"; product "multidrug efflux transporter transcriptional repressor AcrS"; protein_id "WP_001129522.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2399 NZ_CP027599.1 Protein Homology CDS 521655 522317 . + 0 gene_id "nbis-gene-468"; transcript_id "gene-C7A06_RS02755"; Dbxref "Genbank:WP_001129522.1"; ID "cds-WP_001129522.1"; Name "WP_001129522.1"; Parent "gene-C7A06_RS02755"; gbkey "CDS"; gene "acrS"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312163.1"; locus_tag "C7A06_RS02755"; product "multidrug efflux transporter transcriptional repressor AcrS"; protein_id "WP_001129522.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2400 NZ_CP027599.1 RefSeq gene 522320 522499 . - . gene_id "nbis-gene-469"; ID "nbis-gene-469"; Name "yhdU"; gbkey "Gene"; gene "yhdU"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02760";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2401 NZ_CP027599.1 RefSeq transcript 522320 522499 . - . gene_id "nbis-gene-469"; transcript_id "gene-C7A06_RS02760"; ID "gene-C7A06_RS02760"; Name "yhdU"; Parent "nbis-gene-469"; gbkey "Gene"; gene "yhdU"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02760"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2402 NZ_CP027599.1 Protein Homology exon 522320 522499 . - . gene_id "nbis-gene-469"; transcript_id "gene-C7A06_RS02760"; Dbxref "Genbank:WP_001295275.1"; ID "nbis-exon-482"; Name "WP_001295275.1"; Parent "gene-C7A06_RS02760"; gbkey "CDS"; gene "yhdU"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312162.1"; locus_tag "C7A06_RS02760"; product "DUF2556 family protein"; protein_id "WP_001295275.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2403 NZ_CP027599.1 Protein Homology CDS 522320 522499 . - 0 gene_id "nbis-gene-469"; transcript_id "gene-C7A06_RS02760"; Dbxref "Genbank:WP_001295275.1"; ID "cds-WP_001295275.1"; Name "WP_001295275.1"; Parent "gene-C7A06_RS02760"; gbkey "CDS"; gene "yhdU"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312162.1"; locus_tag "C7A06_RS02760"; product "DUF2556 family protein"; protein_id "WP_001295275.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2404 NZ_CP027599.1 RefSeq gene 522583 523467 . - . gene_id "nbis-gene-470"; ID "nbis-gene-470"; Name "yhdJ"; gbkey "Gene"; gene "yhdJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02765";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2405 NZ_CP027599.1 RefSeq transcript 522583 523467 . - . gene_id "nbis-gene-470"; transcript_id "gene-C7A06_RS02765"; ID "gene-C7A06_RS02765"; Name "yhdJ"; Parent "nbis-gene-470"; gbkey "Gene"; gene "yhdJ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02765"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2406 NZ_CP027599.1 Protein Homology exon 522583 523467 . - . gene_id "nbis-gene-470"; transcript_id "gene-C7A06_RS02765"; Dbxref "Genbank:WP_001258900.1"; ID "nbis-exon-483"; Name "WP_001258900.1"; Ontology_term "GO:0006306" "GO:0003677" "GO:0008170"; Parent "gene-C7A06_RS02765"; gbkey "CDS"; gene "yhdJ"; go_function "DNA binding|0003677||IEA" "N-methyltransferase activity|0008170||IEA"; go_process "DNA methylation|0006306||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417728.4"; locus_tag "C7A06_RS02765"; product "adenine-specific DNA-methyltransferase"; protein_id "WP_001258900.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2407 NZ_CP027599.1 Protein Homology CDS 522583 523467 . - 0 gene_id "nbis-gene-470"; transcript_id "gene-C7A06_RS02765"; Dbxref "Genbank:WP_001258900.1"; ID "cds-WP_001258900.1"; Name "WP_001258900.1"; Ontology_term "GO:0006306" "GO:0003677" "GO:0008170"; Parent "gene-C7A06_RS02765"; gbkey "CDS"; gene "yhdJ"; go_function "DNA binding|0003677||IEA" "N-methyltransferase activity|0008170||IEA"; go_process "DNA methylation|0006306||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417728.4"; locus_tag "C7A06_RS02765"; product "adenine-specific DNA-methyltransferase"; protein_id "WP_001258900.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2408 NZ_CP027599.1 RefSeq gene 523553 523849 . - . gene_id "nbis-gene-471"; ID "nbis-gene-471"; Name "fis"; gbkey "Gene"; gene "fis"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02770";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2409 NZ_CP027599.1 RefSeq transcript 523553 523849 . - . gene_id "nbis-gene-471"; transcript_id "gene-C7A06_RS02770"; ID "gene-C7A06_RS02770"; Name "fis"; Parent "nbis-gene-471"; gbkey "Gene"; gene "fis"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02770"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2410 NZ_CP027599.1 Protein Homology exon 523553 523849 . - . gene_id "nbis-gene-471"; transcript_id "gene-C7A06_RS02770"; Dbxref "Genbank:WP_000462905.1"; ID "nbis-exon-484"; Name "WP_000462905.1"; Parent "gene-C7A06_RS02770"; gbkey "CDS"; gene "fis"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1"; locus_tag "C7A06_RS02770"; product "DNA-binding transcriptional regulator Fis"; protein_id "WP_000462905.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2411 NZ_CP027599.1 Protein Homology CDS 523553 523849 . - 0 gene_id "nbis-gene-471"; transcript_id "gene-C7A06_RS02770"; Dbxref "Genbank:WP_000462905.1"; ID "cds-WP_000462905.1"; Name "WP_000462905.1"; Parent "gene-C7A06_RS02770"; gbkey "CDS"; gene "fis"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1"; locus_tag "C7A06_RS02770"; product "DNA-binding transcriptional regulator Fis"; protein_id "WP_000462905.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2412 NZ_CP027599.1 RefSeq gene 523875 524840 . - . gene_id "nbis-gene-472"; ID "nbis-gene-472"; Name "dusB"; gbkey "Gene"; gene "dusB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02775";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2413 NZ_CP027599.1 RefSeq transcript 523875 524840 . - . gene_id "nbis-gene-472"; transcript_id "gene-C7A06_RS02775"; ID "gene-C7A06_RS02775"; Name "dusB"; Parent "nbis-gene-472"; gbkey "Gene"; gene "dusB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02775"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2414 NZ_CP027599.1 Protein Homology exon 523875 524840 . - . gene_id "nbis-gene-472"; transcript_id "gene-C7A06_RS02775"; Dbxref "Genbank:WP_001219652.1"; ID "nbis-exon-485"; Name "WP_001219652.1"; Ontology_term "GO:0008033" "GO:0003824" "GO:0016491" "GO:0017150" "GO:0050660"; Parent "gene-C7A06_RS02775"; gbkey "CDS"; gene "dusB"; go_function "catalytic activity|0003824||IEA" "oxidoreductase activity|0016491||IEA" "tRNA dihydrouridine synthase activity|0017150||IEA" "flavin adenine dinucleotide binding|0050660||IEA"; go_process "tRNA processing|0008033||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1"; locus_tag "C7A06_RS02775"; product "tRNA dihydrouridine synthase DusB"; protein_id "WP_001219652.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2415 NZ_CP027599.1 Protein Homology CDS 523875 524840 . - 0 gene_id "nbis-gene-472"; transcript_id "gene-C7A06_RS02775"; Dbxref "Genbank:WP_001219652.1"; ID "cds-WP_001219652.1"; Name "WP_001219652.1"; Ontology_term "GO:0008033" "GO:0003824" "GO:0016491" "GO:0017150" "GO:0050660"; Parent "gene-C7A06_RS02775"; gbkey "CDS"; gene "dusB"; go_function "catalytic activity|0003824||IEA" "oxidoreductase activity|0016491||IEA" "tRNA dihydrouridine synthase activity|0017150||IEA" "flavin adenine dinucleotide binding|0050660||IEA"; go_process "tRNA processing|0008033||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1"; locus_tag "C7A06_RS02775"; product "tRNA dihydrouridine synthase DusB"; protein_id "WP_001219652.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2416 NZ_CP027599.1 RefSeq gene 525169 526050 . - . gene_id "nbis-gene-473"; ID "nbis-gene-473"; Name "prmA"; gbkey "Gene"; gene "prmA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02780";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2417 NZ_CP027599.1 RefSeq transcript 525169 526050 . - . gene_id "nbis-gene-473"; transcript_id "gene-C7A06_RS02780"; ID "gene-C7A06_RS02780"; Name "prmA"; Parent "nbis-gene-473"; gbkey "Gene"; gene "prmA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02780"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2418 NZ_CP027599.1 Protein Homology exon 525169 526050 . - . gene_id "nbis-gene-473"; transcript_id "gene-C7A06_RS02780"; Dbxref "Genbank:WP_001145827.1"; ID "nbis-exon-486"; Name "WP_001145827.1"; Ontology_term "GO:0006464" "GO:0008757"; Parent "gene-C7A06_RS02780"; gbkey "CDS"; gene "prmA"; go_function "S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA"; go_process "cellular protein modification process|0006464||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312158.1"; locus_tag "C7A06_RS02780"; product "50S ribosomal protein L11 methyltransferase"; protein_id "WP_001145827.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2419 NZ_CP027599.1 Protein Homology CDS 525169 526050 . - 0 gene_id "nbis-gene-473"; transcript_id "gene-C7A06_RS02780"; Dbxref "Genbank:WP_001145827.1"; ID "cds-WP_001145827.1"; Name "WP_001145827.1"; Ontology_term "GO:0006464" "GO:0008757"; Parent "gene-C7A06_RS02780"; gbkey "CDS"; gene "prmA"; go_function "S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA"; go_process "cellular protein modification process|0006464||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312158.1"; locus_tag "C7A06_RS02780"; product "50S ribosomal protein L11 methyltransferase"; protein_id "WP_001145827.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2420 NZ_CP027599.1 RefSeq gene 526062 527513 . - . gene_id "nbis-gene-474"; ID "nbis-gene-474"; Name "panF"; gbkey "Gene"; gene "panF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02785";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2421 NZ_CP027599.1 RefSeq transcript 526062 527513 . - . gene_id "nbis-gene-474"; transcript_id "gene-C7A06_RS02785"; ID "gene-C7A06_RS02785"; Name "panF"; Parent "nbis-gene-474"; gbkey "Gene"; gene "panF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02785"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2422 NZ_CP027599.1 Protein Homology exon 526062 527513 . - . gene_id "nbis-gene-474"; transcript_id "gene-C7A06_RS02785"; Dbxref "Genbank:WP_001175728.1"; ID "nbis-exon-487"; Name "WP_001175728.1"; Ontology_term "GO:0015887" "GO:0015937" "GO:0015498"; Parent "gene-C7A06_RS02785"; gbkey "CDS"; gene "panF"; go_function "pantothenate:sodium symporter activity|0015498||IEA"; go_process "pantothenate transmembrane transport|0015887||IEA" "coenzyme A biosynthetic process|0015937||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312157.2"; locus_tag "C7A06_RS02785"; product "sodium/pantothenate symporter"; protein_id "WP_001175728.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2423 NZ_CP027599.1 Protein Homology CDS 526062 527513 . - 0 gene_id "nbis-gene-474"; transcript_id "gene-C7A06_RS02785"; Dbxref "Genbank:WP_001175728.1"; ID "cds-WP_001175728.1"; Name "WP_001175728.1"; Ontology_term "GO:0015887" "GO:0015937" "GO:0015498"; Parent "gene-C7A06_RS02785"; gbkey "CDS"; gene "panF"; go_function "pantothenate:sodium symporter activity|0015498||IEA"; go_process "pantothenate transmembrane transport|0015887||IEA" "coenzyme A biosynthetic process|0015937||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312157.2"; locus_tag "C7A06_RS02785"; product "sodium/pantothenate symporter"; protein_id "WP_001175728.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2424 NZ_CP027599.1 RefSeq gene 527503 527745 . - . gene_id "nbis-gene-475"; ID "nbis-gene-475"; Name "yhdT"; gbkey "Gene"; gene "yhdT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02790";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2425 NZ_CP027599.1 RefSeq transcript 527503 527745 . - . gene_id "nbis-gene-475"; transcript_id "gene-C7A06_RS02790"; ID "gene-C7A06_RS02790"; Name "yhdT"; Parent "nbis-gene-475"; gbkey "Gene"; gene "yhdT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02790"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2426 NZ_CP027599.1 Protein Homology exon 527503 527745 . - . gene_id "nbis-gene-475"; transcript_id "gene-C7A06_RS02790"; Dbxref "Genbank:WP_000381170.1"; ID "nbis-exon-488"; Name "WP_000381170.1"; Parent "gene-C7A06_RS02790"; gbkey "CDS"; gene "yhdT"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312156.1"; locus_tag "C7A06_RS02790"; product "YhdT family protein"; protein_id "WP_000381170.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2427 NZ_CP027599.1 Protein Homology CDS 527503 527745 . - 0 gene_id "nbis-gene-475"; transcript_id "gene-C7A06_RS02790"; Dbxref "Genbank:WP_000381170.1"; ID "cds-WP_000381170.1"; Name "WP_000381170.1"; Parent "gene-C7A06_RS02790"; gbkey "CDS"; gene "yhdT"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312156.1"; locus_tag "C7A06_RS02790"; product "YhdT family protein"; protein_id "WP_000381170.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2428 NZ_CP027599.1 RefSeq gene 527838 528773 . - . gene_id "nbis-gene-476"; ID "nbis-gene-476"; Name "C7A06_RS02795"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02795";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2429 NZ_CP027599.1 RefSeq transcript 527838 528773 . - . gene_id "nbis-gene-476"; transcript_id "gene-C7A06_RS02795"; ID "gene-C7A06_RS02795"; Name "C7A06_RS02795"; Parent "nbis-gene-476"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02795"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2430 NZ_CP027599.1 Protein Homology exon 527838 528773 . - . gene_id "nbis-gene-476"; transcript_id "gene-C7A06_RS02795"; Dbxref "Genbank:WP_001446002.1"; ID "nbis-exon-489"; Name "WP_001446002.1"; Parent "gene-C7A06_RS02795"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001446002.1"; locus_tag "C7A06_RS02795"; product "sugar kinase"; protein_id "WP_001446002.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2431 NZ_CP027599.1 Protein Homology CDS 527838 528773 . - 0 gene_id "nbis-gene-476"; transcript_id "gene-C7A06_RS02795"; Dbxref "Genbank:WP_001446002.1"; ID "cds-WP_001446002.1"; Name "WP_001446002.1"; Parent "gene-C7A06_RS02795"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001446002.1"; locus_tag "C7A06_RS02795"; product "sugar kinase"; protein_id "WP_001446002.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2432 NZ_CP027599.1 RefSeq gene 528805 529620 . - . gene_id "nbis-gene-477"; ID "nbis-gene-477"; Name "C7A06_RS02800"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02800";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2433 NZ_CP027599.1 RefSeq transcript 528805 529620 . - . gene_id "nbis-gene-477"; transcript_id "gene-C7A06_RS02800"; ID "gene-C7A06_RS02800"; Name "C7A06_RS02800"; Parent "nbis-gene-477"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02800"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2434 NZ_CP027599.1 Protein Homology exon 528805 529620 . - . gene_id "nbis-gene-477"; transcript_id "gene-C7A06_RS02800"; Dbxref "Genbank:WP_001341906.1"; ID "nbis-exon-490"; Name "WP_001341906.1"; Parent "gene-C7A06_RS02800"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001774053.1"; locus_tag "C7A06_RS02800"; product "DeoR/GlpR family DNA-binding transcription regulator"; protein_id "WP_001341906.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2435 NZ_CP027599.1 Protein Homology CDS 528805 529620 . - 0 gene_id "nbis-gene-477"; transcript_id "gene-C7A06_RS02800"; Dbxref "Genbank:WP_001341906.1"; ID "cds-WP_001341906.1"; Name "WP_001341906.1"; Parent "gene-C7A06_RS02800"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001774053.1"; locus_tag "C7A06_RS02800"; product "DeoR/GlpR family DNA-binding transcription regulator"; protein_id "WP_001341906.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2436 NZ_CP027599.1 RefSeq gene 529977 530831 . + . gene_id "nbis-gene-478"; ID "nbis-gene-478"; Name "C7A06_RS02805"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02805";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2437 NZ_CP027599.1 RefSeq transcript 529977 530831 . + . gene_id "nbis-gene-478"; transcript_id "gene-C7A06_RS02805"; ID "gene-C7A06_RS02805"; Name "C7A06_RS02805"; Parent "nbis-gene-478"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02805"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2438 NZ_CP027599.1 Protein Homology exon 529977 530831 . + . gene_id "nbis-gene-478"; transcript_id "gene-C7A06_RS02805"; Dbxref "Genbank:WP_000275535.1"; ID "nbis-exon-491"; Name "WP_000275535.1"; Parent "gene-C7A06_RS02805"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000275530.1"; locus_tag "C7A06_RS02805"; product "tagatose bisphosphate family class II aldolase"; protein_id "WP_000275535.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2439 NZ_CP027599.1 Protein Homology CDS 529977 530831 . + 0 gene_id "nbis-gene-478"; transcript_id "gene-C7A06_RS02805"; Dbxref "Genbank:WP_000275535.1"; ID "cds-WP_000275535.1"; Name "WP_000275535.1"; Parent "gene-C7A06_RS02805"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000275530.1"; locus_tag "C7A06_RS02805"; product "tagatose bisphosphate family class II aldolase"; protein_id "WP_000275535.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2440 NZ_CP027599.1 RefSeq gene 530867 531757 . + . gene_id "nbis-gene-479"; ID "nbis-gene-479"; Name "C7A06_RS02810"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02810";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2441 NZ_CP027599.1 RefSeq transcript 530867 531757 . + . gene_id "nbis-gene-479"; transcript_id "gene-C7A06_RS02810"; ID "gene-C7A06_RS02810"; Name "C7A06_RS02810"; Parent "nbis-gene-479"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02810"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2442 NZ_CP027599.1 Protein Homology exon 530867 531757 . + . gene_id "nbis-gene-479"; transcript_id "gene-C7A06_RS02810"; Dbxref "Genbank:WP_001341904.1"; ID "nbis-exon-492"; Name "WP_001341904.1"; Parent "gene-C7A06_RS02810"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001341904.1"; locus_tag "C7A06_RS02810"; product "substrate-binding domain-containing protein"; protein_id "WP_001341904.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2443 NZ_CP027599.1 Protein Homology CDS 530867 531757 . + 0 gene_id "nbis-gene-479"; transcript_id "gene-C7A06_RS02810"; Dbxref "Genbank:WP_001341904.1"; ID "cds-WP_001341904.1"; Name "WP_001341904.1"; Parent "gene-C7A06_RS02810"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001341904.1"; locus_tag "C7A06_RS02810"; product "substrate-binding domain-containing protein"; protein_id "WP_001341904.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2444 NZ_CP027599.1 RefSeq gene 531818 533317 . + . gene_id "nbis-gene-480"; ID "nbis-gene-480"; Name "C7A06_RS02815"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02815";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2445 NZ_CP027599.1 RefSeq transcript 531818 533317 . + . gene_id "nbis-gene-480"; transcript_id "gene-C7A06_RS02815"; ID "gene-C7A06_RS02815"; Name "C7A06_RS02815"; Parent "nbis-gene-480"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02815"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2446 NZ_CP027599.1 Protein Homology exon 531818 533317 . + . gene_id "nbis-gene-480"; transcript_id "gene-C7A06_RS02815"; Dbxref "Genbank:WP_000132907.1"; ID "nbis-exon-493"; Name "WP_000132907.1"; Parent "gene-C7A06_RS02815"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_020245594.1"; locus_tag "C7A06_RS02815"; product "sugar ABC transporter ATP-binding protein"; protein_id "WP_000132907.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2447 NZ_CP027599.1 Protein Homology CDS 531818 533317 . + 0 gene_id "nbis-gene-480"; transcript_id "gene-C7A06_RS02815"; Dbxref "Genbank:WP_000132907.1"; ID "cds-WP_000132907.1"; Name "WP_000132907.1"; Parent "gene-C7A06_RS02815"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_020245594.1"; locus_tag "C7A06_RS02815"; product "sugar ABC transporter ATP-binding protein"; protein_id "WP_000132907.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2448 NZ_CP027599.1 RefSeq gene 533318 534307 . + . gene_id "nbis-gene-481"; ID "nbis-gene-481"; Name "C7A06_RS02820"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02820";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2449 NZ_CP027599.1 RefSeq transcript 533318 534307 . + . gene_id "nbis-gene-481"; transcript_id "gene-C7A06_RS02820"; ID "gene-C7A06_RS02820"; Name "C7A06_RS02820"; Parent "nbis-gene-481"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02820"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2450 NZ_CP027599.1 Protein Homology exon 533318 534307 . + . gene_id "nbis-gene-481"; transcript_id "gene-C7A06_RS02820"; Dbxref "Genbank:WP_000137048.1"; ID "nbis-exon-494"; Name "WP_000137048.1"; Parent "gene-C7A06_RS02820"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001525780.1"; locus_tag "C7A06_RS02820"; product "ABC transporter permease"; protein_id "WP_000137048.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2451 NZ_CP027599.1 Protein Homology CDS 533318 534307 . + 0 gene_id "nbis-gene-481"; transcript_id "gene-C7A06_RS02820"; Dbxref "Genbank:WP_000137048.1"; ID "cds-WP_000137048.1"; Name "WP_000137048.1"; Parent "gene-C7A06_RS02820"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001525780.1"; locus_tag "C7A06_RS02820"; product "ABC transporter permease"; protein_id "WP_000137048.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2452 NZ_CP027599.1 RefSeq gene 534329 535291 . + . gene_id "nbis-gene-482"; ID "nbis-gene-482"; Name "C7A06_RS02825"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02825";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2453 NZ_CP027599.1 RefSeq transcript 534329 535291 . + . gene_id "nbis-gene-482"; transcript_id "gene-C7A06_RS02825"; ID "gene-C7A06_RS02825"; Name "C7A06_RS02825"; Parent "nbis-gene-482"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02825"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2454 NZ_CP027599.1 Protein Homology exon 534329 535291 . + . gene_id "nbis-gene-482"; transcript_id "gene-C7A06_RS02825"; Dbxref "Genbank:WP_000048610.1"; ID "nbis-exon-495"; Name "WP_000048610.1"; Parent "gene-C7A06_RS02825"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000048618.1"; locus_tag "C7A06_RS02825"; product "sugar kinase"; protein_id "WP_000048610.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2455 NZ_CP027599.1 Protein Homology CDS 534329 535291 . + 0 gene_id "nbis-gene-482"; transcript_id "gene-C7A06_RS02825"; Dbxref "Genbank:WP_000048610.1"; ID "cds-WP_000048610.1"; Name "WP_000048610.1"; Parent "gene-C7A06_RS02825"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000048618.1"; locus_tag "C7A06_RS02825"; product "sugar kinase"; protein_id "WP_000048610.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2456 NZ_CP027599.1 RefSeq gene 535288 536334 . + . gene_id "nbis-gene-483"; ID "nbis-gene-483"; Name "C7A06_RS02830"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02830";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2457 NZ_CP027599.1 RefSeq transcript 535288 536334 . + . gene_id "nbis-gene-483"; transcript_id "gene-C7A06_RS02830"; ID "gene-C7A06_RS02830"; Name "C7A06_RS02830"; Parent "nbis-gene-483"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02830"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2458 NZ_CP027599.1 Protein Homology exon 535288 536334 . + . gene_id "nbis-gene-483"; transcript_id "gene-C7A06_RS02830"; Dbxref "Genbank:WP_000787051.1"; ID "nbis-exon-496"; Name "WP_000787051.1"; Parent "gene-C7A06_RS02830"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000787050.1"; locus_tag "C7A06_RS02830"; product "aldose 1-epimerase family protein"; protein_id "WP_000787051.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2459 NZ_CP027599.1 Protein Homology CDS 535288 536334 . + 0 gene_id "nbis-gene-483"; transcript_id "gene-C7A06_RS02830"; Dbxref "Genbank:WP_000787051.1"; ID "cds-WP_000787051.1"; Name "WP_000787051.1"; Parent "gene-C7A06_RS02830"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000787050.1"; locus_tag "C7A06_RS02830"; product "aldose 1-epimerase family protein"; protein_id "WP_000787051.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2460 NZ_CP027599.1 RefSeq gene 536426 537775 . - . gene_id "nbis-gene-484"; ID "nbis-gene-484"; Name "accC"; gbkey "Gene"; gene "accC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02835";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2461 NZ_CP027599.1 RefSeq transcript 536426 537775 . - . gene_id "nbis-gene-484"; transcript_id "gene-C7A06_RS02835"; ID "gene-C7A06_RS02835"; Name "accC"; Parent "nbis-gene-484"; gbkey "Gene"; gene "accC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02835"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2462 NZ_CP027599.1 Protein Homology exon 536426 537775 . - . gene_id "nbis-gene-484"; transcript_id "gene-C7A06_RS02835"; Dbxref "Genbank:WP_000884639.1"; ID "nbis-exon-497"; Name "WP_000884639.1"; Ontology_term "GO:0006633" "GO:0003989" "GO:0004075" "GO:0009317"; Parent "gene-C7A06_RS02835"; gbkey "CDS"; gene "accC"; go_component "acetyl-CoA carboxylase complex|0009317||IEA"; go_function "acetyl-CoA carboxylase activity|0003989||IEA" "biotin carboxylase activity|0004075||IEA"; go_process "fatty acid biosynthetic process|0006633||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1"; locus_tag "C7A06_RS02835"; product "acetyl-CoA carboxylase biotin carboxylase subunit"; protein_id "WP_000884639.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2463 NZ_CP027599.1 Protein Homology CDS 536426 537775 . - 0 gene_id "nbis-gene-484"; transcript_id "gene-C7A06_RS02835"; Dbxref "Genbank:WP_000884639.1"; ID "cds-WP_000884639.1"; Name "WP_000884639.1"; Ontology_term "GO:0006633" "GO:0003989" "GO:0004075" "GO:0009317"; Parent "gene-C7A06_RS02835"; gbkey "CDS"; gene "accC"; go_component "acetyl-CoA carboxylase complex|0009317||IEA"; go_function "acetyl-CoA carboxylase activity|0003989||IEA" "biotin carboxylase activity|0004075||IEA"; go_process "fatty acid biosynthetic process|0006633||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1"; locus_tag "C7A06_RS02835"; product "acetyl-CoA carboxylase biotin carboxylase subunit"; protein_id "WP_000884639.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2464 NZ_CP027599.1 RefSeq gene 537786 538256 . - . gene_id "nbis-gene-485"; ID "nbis-gene-485"; Name "accB"; gbkey "Gene"; gene "accB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02840";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2465 NZ_CP027599.1 RefSeq transcript 537786 538256 . - . gene_id "nbis-gene-485"; transcript_id "gene-C7A06_RS02840"; ID "gene-C7A06_RS02840"; Name "accB"; Parent "nbis-gene-485"; gbkey "Gene"; gene "accB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02840"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2466 NZ_CP027599.1 Protein Homology exon 537786 538256 . - . gene_id "nbis-gene-485"; transcript_id "gene-C7A06_RS02840"; Dbxref "Genbank:WP_000354619.1"; ID "nbis-exon-498"; Name "WP_000354619.1"; Ontology_term "GO:0006633" "GO:0003989" "GO:0009317"; Parent "gene-C7A06_RS02840"; gbkey "CDS"; gene "accB"; go_component "acetyl-CoA carboxylase complex|0009317||IEA"; go_function "acetyl-CoA carboxylase activity|0003989||IEA"; go_process "fatty acid biosynthetic process|0006633||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312154.1"; locus_tag "C7A06_RS02840"; product "acetyl-CoA carboxylase biotin carboxyl carrier protein"; protein_id "WP_000354619.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2467 NZ_CP027599.1 Protein Homology CDS 537786 538256 . - 0 gene_id "nbis-gene-485"; transcript_id "gene-C7A06_RS02840"; Dbxref "Genbank:WP_000354619.1"; ID "cds-WP_000354619.1"; Name "WP_000354619.1"; Ontology_term "GO:0006633" "GO:0003989" "GO:0009317"; Parent "gene-C7A06_RS02840"; gbkey "CDS"; gene "accB"; go_component "acetyl-CoA carboxylase complex|0009317||IEA"; go_function "acetyl-CoA carboxylase activity|0003989||IEA"; go_process "fatty acid biosynthetic process|0006633||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312154.1"; locus_tag "C7A06_RS02840"; product "acetyl-CoA carboxylase biotin carboxyl carrier protein"; protein_id "WP_000354619.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2468 NZ_CP027599.1 RefSeq gene 539122 539952 . - . gene_id "nbis-gene-486"; ID "nbis-gene-486"; Name "C7A06_RS02850"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02850";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2469 NZ_CP027599.1 RefSeq transcript 539122 539952 . - . gene_id "nbis-gene-486"; transcript_id "gene-C7A06_RS02850"; ID "gene-C7A06_RS02850"; Name "C7A06_RS02850"; Parent "nbis-gene-486"; gbkey "Gene"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02850"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2470 NZ_CP027599.1 Protein Homology exon 539122 539952 . - . gene_id "nbis-gene-486"; transcript_id "gene-C7A06_RS02850"; Dbxref "Genbank:WP_000202360.1"; ID "nbis-exon-499"; Name "WP_000202360.1"; Parent "gene-C7A06_RS02850"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000838295.1"; locus_tag "C7A06_RS02850"; product "hypothetical protein"; protein_id "WP_000202360.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2471 NZ_CP027599.1 Protein Homology CDS 539122 539952 . - 0 gene_id "nbis-gene-486"; transcript_id "gene-C7A06_RS02850"; Dbxref "Genbank:WP_000202360.1"; ID "cds-WP_000202360.1"; Name "WP_000202360.1"; Parent "gene-C7A06_RS02850"; gbkey "CDS"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000838295.1"; locus_tag "C7A06_RS02850"; product "hypothetical protein"; protein_id "WP_000202360.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2472 NZ_CP027599.1 RefSeq gene 539989 540963 . - . gene_id "nbis-gene-487"; ID "nbis-gene-487"; Name "yhdH"; gbkey "Gene"; gene "yhdH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02855";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2473 NZ_CP027599.1 RefSeq transcript 539989 540963 . - . gene_id "nbis-gene-487"; transcript_id "gene-C7A06_RS02855"; ID "gene-C7A06_RS02855"; Name "yhdH"; Parent "nbis-gene-487"; gbkey "Gene"; gene "yhdH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02855"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2474 NZ_CP027599.1 Protein Homology exon 539989 540963 . - . gene_id "nbis-gene-487"; transcript_id "gene-C7A06_RS02855"; Dbxref "Genbank:WP_001148478.1"; ID "nbis-exon-500"; Name "WP_001148478.1"; Parent "gene-C7A06_RS02855"; gbkey "CDS"; gene "yhdH"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312152.1"; locus_tag "C7A06_RS02855"; product "oxidoreductase"; protein_id "WP_001148478.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2475 NZ_CP027599.1 Protein Homology CDS 539989 540963 . - 0 gene_id "nbis-gene-487"; transcript_id "gene-C7A06_RS02855"; Dbxref "Genbank:WP_001148478.1"; ID "cds-WP_001148478.1"; Name "WP_001148478.1"; Parent "gene-C7A06_RS02855"; gbkey "CDS"; gene "yhdH"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312152.1"; locus_tag "C7A06_RS02855"; product "oxidoreductase"; protein_id "WP_001148478.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2476 NZ_CP027599.1 RefSeq gene 541115 543055 . + . gene_id "nbis-gene-488"; ID "nbis-gene-488"; Name "csrD"; gbkey "Gene"; gene "csrD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02860";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2477 NZ_CP027599.1 RefSeq transcript 541115 543055 . + . gene_id "nbis-gene-488"; transcript_id "gene-C7A06_RS02860"; ID "gene-C7A06_RS02860"; Name "csrD"; Parent "nbis-gene-488"; gbkey "Gene"; gene "csrD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02860"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2478 NZ_CP027599.1 Protein Homology exon 541115 543055 . + . gene_id "nbis-gene-488"; transcript_id "gene-C7A06_RS02860"; Dbxref "Genbank:WP_001241436.1"; ID "nbis-exon-501"; Name "WP_001241436.1"; Parent "gene-C7A06_RS02860"; gbkey "CDS"; gene "csrD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417718.1"; locus_tag "C7A06_RS02860"; product "RNase E specificity factor CsrD"; protein_id "WP_001241436.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2479 NZ_CP027599.1 Protein Homology CDS 541115 543055 . + 0 gene_id "nbis-gene-488"; transcript_id "gene-C7A06_RS02860"; Dbxref "Genbank:WP_001241436.1"; ID "cds-WP_001241436.1"; Name "WP_001241436.1"; Parent "gene-C7A06_RS02860"; gbkey "CDS"; gene "csrD"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417718.1"; locus_tag "C7A06_RS02860"; product "RNase E specificity factor CsrD"; protein_id "WP_001241436.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2480 NZ_CP027599.1 RefSeq gene 543360 544403 . + . gene_id "nbis-gene-489"; ID "nbis-gene-489"; Name "mreB"; gbkey "Gene"; gene "mreB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02875";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2481 NZ_CP027599.1 RefSeq transcript 543360 544403 . + . gene_id "nbis-gene-489"; transcript_id "gene-C7A06_RS02875"; ID "gene-C7A06_RS02875"; Name "mreB"; Parent "nbis-gene-489"; gbkey "Gene"; gene "mreB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02875"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2482 NZ_CP027599.1 Protein Homology exon 543360 544403 . + . gene_id "nbis-gene-489"; transcript_id "gene-C7A06_RS02875"; Dbxref "Genbank:WP_000913396.1"; ID "nbis-exon-502"; Name "WP_000913396.1"; Parent "gene-C7A06_RS02875"; gbkey "CDS"; gene "mreB"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1"; locus_tag "C7A06_RS02875"; product "rod shape-determining protein MreB"; protein_id "WP_000913396.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2483 NZ_CP027599.1 Protein Homology CDS 543360 544403 . + 0 gene_id "nbis-gene-489"; transcript_id "gene-C7A06_RS02875"; Dbxref "Genbank:WP_000913396.1"; ID "cds-WP_000913396.1"; Name "WP_000913396.1"; Parent "gene-C7A06_RS02875"; gbkey "CDS"; gene "mreB"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1"; locus_tag "C7A06_RS02875"; product "rod shape-determining protein MreB"; protein_id "WP_000913396.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2484 NZ_CP027599.1 RefSeq gene 544469 545572 . + . gene_id "nbis-gene-490"; ID "nbis-gene-490"; Name "mreC"; gbkey "Gene"; gene "mreC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02880";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2485 NZ_CP027599.1 RefSeq transcript 544469 545572 . + . gene_id "nbis-gene-490"; transcript_id "gene-C7A06_RS02880"; ID "gene-C7A06_RS02880"; Name "mreC"; Parent "nbis-gene-490"; gbkey "Gene"; gene "mreC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02880"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2486 NZ_CP027599.1 Protein Homology exon 544469 545572 . + . gene_id "nbis-gene-490"; transcript_id "gene-C7A06_RS02880"; Dbxref "Genbank:WP_000802516.1"; ID "nbis-exon-503"; Name "WP_000802516.1"; Ontology_term "GO:0008360"; Parent "gene-C7A06_RS02880"; gbkey "CDS"; gene "mreC"; go_process "regulation of cell shape|0008360||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312149.1"; locus_tag "C7A06_RS02880"; product "rod shape-determining protein MreC"; protein_id "WP_000802516.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2487 NZ_CP027599.1 Protein Homology CDS 544469 545572 . + 0 gene_id "nbis-gene-490"; transcript_id "gene-C7A06_RS02880"; Dbxref "Genbank:WP_000802516.1"; ID "cds-WP_000802516.1"; Name "WP_000802516.1"; Ontology_term "GO:0008360"; Parent "gene-C7A06_RS02880"; gbkey "CDS"; gene "mreC"; go_process "regulation of cell shape|0008360||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312149.1"; locus_tag "C7A06_RS02880"; product "rod shape-determining protein MreC"; protein_id "WP_000802516.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2488 NZ_CP027599.1 RefSeq gene 545572 546060 . + . gene_id "nbis-gene-491"; ID "nbis-gene-491"; Name "mreD"; gbkey "Gene"; gene "mreD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02885";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2489 NZ_CP027599.1 RefSeq transcript 545572 546060 . + . gene_id "nbis-gene-491"; transcript_id "gene-C7A06_RS02885"; ID "gene-C7A06_RS02885"; Name "mreD"; Parent "nbis-gene-491"; gbkey "Gene"; gene "mreD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02885"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2490 NZ_CP027599.1 Protein Homology exon 545572 546060 . + . gene_id "nbis-gene-491"; transcript_id "gene-C7A06_RS02885"; Dbxref "Genbank:WP_000179409.1"; ID "nbis-exon-504"; Name "WP_000179409.1"; Parent "gene-C7A06_RS02885"; gbkey "CDS"; gene "mreD"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1"; locus_tag "C7A06_RS02885"; product "rod shape-determining protein MreD"; protein_id "WP_000179409.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2491 NZ_CP027599.1 Protein Homology CDS 545572 546060 . + 0 gene_id "nbis-gene-491"; transcript_id "gene-C7A06_RS02885"; Dbxref "Genbank:WP_000179409.1"; ID "cds-WP_000179409.1"; Name "WP_000179409.1"; Parent "gene-C7A06_RS02885"; gbkey "CDS"; gene "mreD"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1"; locus_tag "C7A06_RS02885"; product "rod shape-determining protein MreD"; protein_id "WP_000179409.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2492 NZ_CP027599.1 RefSeq gene 546069 546662 . + . gene_id "nbis-gene-492"; ID "nbis-gene-492"; Name "yhdE"; gbkey "Gene"; gene "yhdE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02890";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2493 NZ_CP027599.1 RefSeq transcript 546069 546662 . + . gene_id "nbis-gene-492"; transcript_id "gene-C7A06_RS02890"; ID "gene-C7A06_RS02890"; Name "yhdE"; Parent "nbis-gene-492"; gbkey "Gene"; gene "yhdE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02890"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2494 NZ_CP027599.1 Protein Homology exon 546069 546662 . + . gene_id "nbis-gene-492"; transcript_id "gene-C7A06_RS02890"; Dbxref "Genbank:WP_000203096.1"; ID "nbis-exon-505"; Name "WP_000203096.1"; Parent "gene-C7A06_RS02890"; gbkey "CDS"; gene "yhdE"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709043.1"; locus_tag "C7A06_RS02890"; product "nucleoside triphosphate pyrophosphatase YhdE"; protein_id "WP_000203096.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2495 NZ_CP027599.1 Protein Homology CDS 546069 546662 . + 0 gene_id "nbis-gene-492"; transcript_id "gene-C7A06_RS02890"; Dbxref "Genbank:WP_000203096.1"; ID "cds-WP_000203096.1"; Name "WP_000203096.1"; Parent "gene-C7A06_RS02890"; gbkey "CDS"; gene "yhdE"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709043.1"; locus_tag "C7A06_RS02890"; product "nucleoside triphosphate pyrophosphatase YhdE"; protein_id "WP_000203096.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2496 NZ_CP027599.1 RefSeq gene 546652 548121 . + . gene_id "nbis-gene-493"; ID "nbis-gene-493"; Name "rng"; gbkey "Gene"; gene "rng"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02895";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2497 NZ_CP027599.1 RefSeq transcript 546652 548121 . + . gene_id "nbis-gene-493"; transcript_id "gene-C7A06_RS02895"; ID "gene-C7A06_RS02895"; Name "rng"; Parent "nbis-gene-493"; gbkey "Gene"; gene "rng"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02895"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2498 NZ_CP027599.1 Protein Homology exon 546652 548121 . + . gene_id "nbis-gene-493"; transcript_id "gene-C7A06_RS02895"; Dbxref "Genbank:WP_000123197.1"; ID "nbis-exon-506"; Name "WP_000123197.1"; Ontology_term "GO:0006396" "GO:0003723" "GO:0004540"; Parent "gene-C7A06_RS02895"; gbkey "CDS"; gene "rng"; go_function "RNA binding|0003723||IEA" "ribonuclease activity|0004540||IEA"; go_process "RNA processing|0006396||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1"; locus_tag "C7A06_RS02895"; product "ribonuclease G"; protein_id "WP_000123197.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2499 NZ_CP027599.1 Protein Homology CDS 546652 548121 . + 0 gene_id "nbis-gene-493"; transcript_id "gene-C7A06_RS02895"; Dbxref "Genbank:WP_000123197.1"; ID "cds-WP_000123197.1"; Name "WP_000123197.1"; Ontology_term "GO:0006396" "GO:0003723" "GO:0004540"; Parent "gene-C7A06_RS02895"; gbkey "CDS"; gene "rng"; go_function "RNA binding|0003723||IEA" "ribonuclease activity|0004540||IEA"; go_process "RNA processing|0006396||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1"; locus_tag "C7A06_RS02895"; product "ribonuclease G"; protein_id "WP_000123197.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2500 NZ_CP027599.1 RefSeq gene 548189 551989 . + . gene_id "nbis-gene-494"; ID "nbis-gene-494"; Name "yhdP"; gbkey "Gene"; gene "yhdP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02900";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2501 NZ_CP027599.1 RefSeq transcript 548189 551989 . + . gene_id "nbis-gene-494"; transcript_id "gene-C7A06_RS02900"; ID "gene-C7A06_RS02900"; Name "yhdP"; Parent "nbis-gene-494"; gbkey "Gene"; gene "yhdP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02900"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2502 NZ_CP027599.1 Protein Homology exon 548189 551989 . + . gene_id "nbis-gene-494"; transcript_id "gene-C7A06_RS02900"; Dbxref "Genbank:WP_001253605.1"; ID "nbis-exon-507"; Name "WP_001253605.1"; Parent "gene-C7A06_RS02900"; gbkey "CDS"; gene "yhdP"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709041.3"; locus_tag "C7A06_RS02900"; product "AsmA2 domain-containing protein YhdP"; protein_id "WP_001253605.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2503 NZ_CP027599.1 Protein Homology CDS 548189 551989 . + 0 gene_id "nbis-gene-494"; transcript_id "gene-C7A06_RS02900"; Dbxref "Genbank:WP_001253605.1"; ID "cds-WP_001253605.1"; Name "WP_001253605.1"; Parent "gene-C7A06_RS02900"; gbkey "CDS"; gene "yhdP"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709041.3"; locus_tag "C7A06_RS02900"; product "AsmA2 domain-containing protein YhdP"; protein_id "WP_001253605.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2504 NZ_CP027599.1 RefSeq gene 552145 553590 . + . gene_id "nbis-gene-495"; ID "nbis-gene-495"; Name "tldD"; gbkey "Gene"; gene "tldD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02905";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2505 NZ_CP027599.1 RefSeq transcript 552145 553590 . + . gene_id "nbis-gene-495"; transcript_id "gene-C7A06_RS02905"; ID "gene-C7A06_RS02905"; Name "tldD"; Parent "nbis-gene-495"; gbkey "Gene"; gene "tldD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02905"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2506 NZ_CP027599.1 Protein Homology exon 552145 553590 . + . gene_id "nbis-gene-495"; transcript_id "gene-C7A06_RS02905"; Dbxref "Genbank:WP_000055904.1"; ID "nbis-exon-508"; Name "WP_000055904.1"; Ontology_term "GO:0006508" "GO:0008237"; Parent "gene-C7A06_RS02905"; gbkey "CDS"; gene "tldD"; go_function "metallopeptidase activity|0008237||IEA"; go_process "proteolysis|0006508||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417711.1"; locus_tag "C7A06_RS02905"; product "metalloprotease TldD"; protein_id "WP_000055904.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2507 NZ_CP027599.1 Protein Homology CDS 552145 553590 . + 0 gene_id "nbis-gene-495"; transcript_id "gene-C7A06_RS02905"; Dbxref "Genbank:WP_000055904.1"; ID "cds-WP_000055904.1"; Name "WP_000055904.1"; Ontology_term "GO:0006508" "GO:0008237"; Parent "gene-C7A06_RS02905"; gbkey "CDS"; gene "tldD"; go_function "metallopeptidase activity|0008237||IEA"; go_process "proteolysis|0006508||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417711.1"; locus_tag "C7A06_RS02905"; product "metalloprotease TldD"; protein_id "WP_000055904.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2508 NZ_CP027599.1 RefSeq gene 553718 554647 . - . gene_id "nbis-gene-496"; ID "nbis-gene-496"; Name "aaeR"; gbkey "Gene"; gene "aaeR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02910";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2509 NZ_CP027599.1 RefSeq transcript 553718 554647 . - . gene_id "nbis-gene-496"; transcript_id "gene-C7A06_RS02910"; ID "gene-C7A06_RS02910"; Name "aaeR"; Parent "nbis-gene-496"; gbkey "Gene"; gene "aaeR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02910"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2510 NZ_CP027599.1 Protein Homology exon 553718 554647 . - . gene_id "nbis-gene-496"; transcript_id "gene-C7A06_RS02910"; Dbxref "Genbank:WP_000440317.1"; ID "nbis-exon-509"; Name "WP_000440317.1"; Ontology_term "GO:0006355" "GO:0003700"; Parent "gene-C7A06_RS02910"; gbkey "CDS"; gene "aaeR"; go_function "DNA-binding transcription factor activity|0003700||IEA"; go_process "regulation of transcription, DNA-templated|0006355||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312143.1"; locus_tag "C7A06_RS02910"; product "HTH-type transcriptional activator AaeR"; protein_id "WP_000440317.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2511 NZ_CP027599.1 Protein Homology CDS 553718 554647 . - 0 gene_id "nbis-gene-496"; transcript_id "gene-C7A06_RS02910"; Dbxref "Genbank:WP_000440317.1"; ID "cds-WP_000440317.1"; Name "WP_000440317.1"; Ontology_term "GO:0006355" "GO:0003700"; Parent "gene-C7A06_RS02910"; gbkey "CDS"; gene "aaeR"; go_function "DNA-binding transcription factor activity|0003700||IEA"; go_process "regulation of transcription, DNA-templated|0006355||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312143.1"; locus_tag "C7A06_RS02910"; product "HTH-type transcriptional activator AaeR"; protein_id "WP_000440317.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2512 NZ_CP027599.1 RefSeq gene 554830 555033 . + . gene_id "nbis-gene-497"; ID "nbis-gene-497"; Name "aaeX"; gbkey "Gene"; gene "aaeX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02915";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2513 NZ_CP027599.1 RefSeq transcript 554830 555033 . + . gene_id "nbis-gene-497"; transcript_id "gene-C7A06_RS02915"; ID "gene-C7A06_RS02915"; Name "aaeX"; Parent "nbis-gene-497"; gbkey "Gene"; gene "aaeX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02915"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2514 NZ_CP027599.1 Protein Homology exon 554830 555033 . + . gene_id "nbis-gene-497"; transcript_id "gene-C7A06_RS02915"; Dbxref "Genbank:WP_000051841.1"; ID "nbis-exon-510"; Name "WP_000051841.1"; Parent "gene-C7A06_RS02915"; gbkey "CDS"; gene "aaeX"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1"; locus_tag "C7A06_RS02915"; product "p-hydroxybenzoic acid efflux pump operon protein AaeX"; protein_id "WP_000051841.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2515 NZ_CP027599.1 Protein Homology CDS 554830 555033 . + 0 gene_id "nbis-gene-497"; transcript_id "gene-C7A06_RS02915"; Dbxref "Genbank:WP_000051841.1"; ID "cds-WP_000051841.1"; Name "WP_000051841.1"; Parent "gene-C7A06_RS02915"; gbkey "CDS"; gene "aaeX"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1"; locus_tag "C7A06_RS02915"; product "p-hydroxybenzoic acid efflux pump operon protein AaeX"; protein_id "WP_000051841.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2516 NZ_CP027599.1 RefSeq gene 555041 555973 . + . gene_id "nbis-gene-498"; ID "nbis-gene-498"; Name "aaeA"; gbkey "Gene"; gene "aaeA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02920";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2517 NZ_CP027599.1 RefSeq transcript 555041 555973 . + . gene_id "nbis-gene-498"; transcript_id "gene-C7A06_RS02920"; ID "gene-C7A06_RS02920"; Name "aaeA"; Parent "nbis-gene-498"; gbkey "Gene"; gene "aaeA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02920"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2518 NZ_CP027599.1 Protein Homology exon 555041 555973 . + . gene_id "nbis-gene-498"; transcript_id "gene-C7A06_RS02920"; Dbxref "Genbank:WP_000854021.1"; ID "nbis-exon-511"; Name "WP_000854021.1"; Ontology_term "GO:0055085" "GO:0022857"; Parent "gene-C7A06_RS02920"; gbkey "CDS"; gene "aaeA"; go_function "transmembrane transporter activity|0022857||IEA"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417708.1"; locus_tag "C7A06_RS02920"; product "p-hydroxybenzoic acid efflux pump subunit AaeA"; protein_id "WP_000854021.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2519 NZ_CP027599.1 Protein Homology CDS 555041 555973 . + 0 gene_id "nbis-gene-498"; transcript_id "gene-C7A06_RS02920"; Dbxref "Genbank:WP_000854021.1"; ID "cds-WP_000854021.1"; Name "WP_000854021.1"; Ontology_term "GO:0055085" "GO:0022857"; Parent "gene-C7A06_RS02920"; gbkey "CDS"; gene "aaeA"; go_function "transmembrane transporter activity|0022857||IEA"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417708.1"; locus_tag "C7A06_RS02920"; product "p-hydroxybenzoic acid efflux pump subunit AaeA"; protein_id "WP_000854021.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2520 NZ_CP027599.1 RefSeq gene 555979 557946 . + . gene_id "nbis-gene-499"; ID "nbis-gene-499"; Name "aaeB"; gbkey "Gene"; gene "aaeB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02925";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2521 NZ_CP027599.1 RefSeq transcript 555979 557946 . + . gene_id "nbis-gene-499"; transcript_id "gene-C7A06_RS02925"; ID "gene-C7A06_RS02925"; Name "aaeB"; Parent "nbis-gene-499"; gbkey "Gene"; gene "aaeB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02925"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2522 NZ_CP027599.1 Protein Homology exon 555979 557946 . + . gene_id "nbis-gene-499"; transcript_id "gene-C7A06_RS02925"; Dbxref "Genbank:WP_000510983.1"; ID "nbis-exon-512"; Name "WP_000510983.1"; Ontology_term "GO:0055085" "GO:0022857"; Parent "gene-C7A06_RS02925"; gbkey "CDS"; gene "aaeB"; go_function "transmembrane transporter activity|0022857||IEA"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709037.1"; locus_tag "C7A06_RS02925"; product "p-hydroxybenzoic acid efflux pump subunit AaeB"; protein_id "WP_000510983.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2523 NZ_CP027599.1 Protein Homology CDS 555979 557946 . + 0 gene_id "nbis-gene-499"; transcript_id "gene-C7A06_RS02925"; Dbxref "Genbank:WP_000510983.1"; ID "cds-WP_000510983.1"; Name "WP_000510983.1"; Ontology_term "GO:0055085" "GO:0022857"; Parent "gene-C7A06_RS02925"; gbkey "CDS"; gene "aaeB"; go_function "transmembrane transporter activity|0022857||IEA"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709037.1"; locus_tag "C7A06_RS02925"; product "p-hydroxybenzoic acid efflux pump subunit AaeB"; protein_id "WP_000510983.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2524 NZ_CP027599.1 RefSeq gene 558038 558310 . + . gene_id "nbis-gene-500"; ID "nbis-gene-500"; Name "yhcO"; gbkey "Gene"; gene "yhcO"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02930";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2525 NZ_CP027599.1 RefSeq transcript 558038 558310 . + . gene_id "nbis-gene-500"; transcript_id "gene-C7A06_RS02930"; ID "gene-C7A06_RS02930"; Name "yhcO"; Parent "nbis-gene-500"; gbkey "Gene"; gene "yhcO"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02930"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2526 NZ_CP027599.1 Protein Homology exon 558038 558310 . + . gene_id "nbis-gene-500"; transcript_id "gene-C7A06_RS02930"; Dbxref "Genbank:WP_001029013.1"; ID "nbis-exon-513"; Name "WP_001029013.1"; Parent "gene-C7A06_RS02930"; gbkey "CDS"; gene "yhcO"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312139.1"; locus_tag "C7A06_RS02930"; product "barstar family protein"; protein_id "WP_001029013.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2527 NZ_CP027599.1 Protein Homology CDS 558038 558310 . + 0 gene_id "nbis-gene-500"; transcript_id "gene-C7A06_RS02930"; Dbxref "Genbank:WP_001029013.1"; ID "cds-WP_001029013.1"; Name "WP_001029013.1"; Parent "gene-C7A06_RS02930"; gbkey "CDS"; gene "yhcO"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312139.1"; locus_tag "C7A06_RS02930"; product "barstar family protein"; protein_id "WP_001029013.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2528 NZ_CP027599.1 RefSeq gene 558366 558629 . - . gene_id "nbis-gene-501"; ID "nbis-gene-501"; Name "yhcN"; gbkey "Gene"; gene "yhcN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02935";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2529 NZ_CP027599.1 RefSeq transcript 558366 558629 . - . gene_id "nbis-gene-501"; transcript_id "gene-C7A06_RS02935"; ID "gene-C7A06_RS02935"; Name "yhcN"; Parent "nbis-gene-501"; gbkey "Gene"; gene "yhcN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02935"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2530 NZ_CP027599.1 Protein Homology exon 558366 558629 . - . gene_id "nbis-gene-501"; transcript_id "gene-C7A06_RS02935"; Dbxref "Genbank:WP_000695690.1"; ID "nbis-exon-514"; Name "WP_000695690.1"; Parent "gene-C7A06_RS02935"; gbkey "CDS"; gene "yhcN"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417705.2"; locus_tag "C7A06_RS02935"; product "peroxide/acid stress response protein YhcN"; protein_id "WP_000695690.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2531 NZ_CP027599.1 Protein Homology CDS 558366 558629 . - 0 gene_id "nbis-gene-501"; transcript_id "gene-C7A06_RS02935"; Dbxref "Genbank:WP_000695690.1"; ID "cds-WP_000695690.1"; Name "WP_000695690.1"; Parent "gene-C7A06_RS02935"; gbkey "CDS"; gene "yhcN"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417705.2"; locus_tag "C7A06_RS02935"; product "peroxide/acid stress response protein YhcN"; protein_id "WP_000695690.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2532 NZ_CP027599.1 RefSeq gene 558994 559464 . - . gene_id "nbis-gene-502"; ID "nbis-gene-502"; Name "argR"; gbkey "Gene"; gene "argR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02940";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2533 NZ_CP027599.1 RefSeq transcript 558994 559464 . - . gene_id "nbis-gene-502"; transcript_id "gene-C7A06_RS02940"; ID "gene-C7A06_RS02940"; Name "argR"; Parent "nbis-gene-502"; gbkey "Gene"; gene "argR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02940"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2534 NZ_CP027599.1 Protein Homology exon 558994 559464 . - . gene_id "nbis-gene-502"; transcript_id "gene-C7A06_RS02940"; Dbxref "Genbank:WP_001257846.1"; ID "nbis-exon-515"; Name "WP_001257846.1"; Parent "gene-C7A06_RS02940"; gbkey "CDS"; gene "argR"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1"; locus_tag "C7A06_RS02940"; product "transcriptional regulator ArgR"; protein_id "WP_001257846.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2535 NZ_CP027599.1 Protein Homology CDS 558994 559464 . - 0 gene_id "nbis-gene-502"; transcript_id "gene-C7A06_RS02940"; Dbxref "Genbank:WP_001257846.1"; ID "cds-WP_001257846.1"; Name "WP_001257846.1"; Parent "gene-C7A06_RS02940"; gbkey "CDS"; gene "argR"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1"; locus_tag "C7A06_RS02940"; product "transcriptional regulator ArgR"; protein_id "WP_001257846.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2536 NZ_CP027599.1 RefSeq gene 559899 560837 . + . gene_id "nbis-gene-503"; ID "nbis-gene-503"; Name "mdh"; gbkey "Gene"; gene "mdh"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02945";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2537 NZ_CP027599.1 RefSeq transcript 559899 560837 . + . gene_id "nbis-gene-503"; transcript_id "gene-C7A06_RS02945"; ID "gene-C7A06_RS02945"; Name "mdh"; Parent "nbis-gene-503"; gbkey "Gene"; gene "mdh"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02945"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2538 NZ_CP027599.1 Protein Homology exon 559899 560837 . + . gene_id "nbis-gene-503"; transcript_id "gene-C7A06_RS02945"; Dbxref "Genbank:WP_001307415.1"; ID "nbis-exon-516"; Name "WP_001307415.1"; Ontology_term "GO:0006099" "GO:0030060"; Parent "gene-C7A06_RS02945"; gbkey "CDS"; gene "mdh"; go_function "L-malate dehydrogenase activity|0030060||IEA"; go_process "tricarboxylic acid cycle|0006099||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1"; locus_tag "C7A06_RS02945"; product "malate dehydrogenase"; protein_id "WP_001307415.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2539 NZ_CP027599.1 Protein Homology CDS 559899 560837 . + 0 gene_id "nbis-gene-503"; transcript_id "gene-C7A06_RS02945"; Dbxref "Genbank:WP_001307415.1"; ID "cds-WP_001307415.1"; Name "WP_001307415.1"; Ontology_term "GO:0006099" "GO:0030060"; Parent "gene-C7A06_RS02945"; gbkey "CDS"; gene "mdh"; go_function "L-malate dehydrogenase activity|0030060||IEA"; go_process "tricarboxylic acid cycle|0006099||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1"; locus_tag "C7A06_RS02945"; product "malate dehydrogenase"; protein_id "WP_001307415.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2540 NZ_CP027599.1 RefSeq gene 560900 561967 . - . gene_id "nbis-gene-504"; ID "nbis-gene-504"; Name "degS"; gbkey "Gene"; gene "degS"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02950";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2541 NZ_CP027599.1 RefSeq transcript 560900 561967 . - . gene_id "nbis-gene-504"; transcript_id "gene-C7A06_RS02950"; ID "gene-C7A06_RS02950"; Name "degS"; Parent "nbis-gene-504"; gbkey "Gene"; gene "degS"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02950"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2542 NZ_CP027599.1 Protein Homology exon 560900 561967 . - . gene_id "nbis-gene-504"; transcript_id "gene-C7A06_RS02950"; Dbxref "Genbank:WP_000497723.1"; ID "nbis-exon-517"; Name "WP_000497723.1"; Ontology_term "GO:0006508" "GO:0004252"; Parent "gene-C7A06_RS02950"; gbkey "CDS"; gene "degS"; go_function "serine-type endopeptidase activity|0004252||IEA"; go_process "proteolysis|0006508||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312135.1"; locus_tag "C7A06_RS02950"; product "outer membrane-stress sensor serine endopeptidase DegS"; protein_id "WP_000497723.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2543 NZ_CP027599.1 Protein Homology CDS 560900 561967 . - 0 gene_id "nbis-gene-504"; transcript_id "gene-C7A06_RS02950"; Dbxref "Genbank:WP_000497723.1"; ID "cds-WP_000497723.1"; Name "WP_000497723.1"; Ontology_term "GO:0006508" "GO:0004252"; Parent "gene-C7A06_RS02950"; gbkey "CDS"; gene "degS"; go_function "serine-type endopeptidase activity|0004252||IEA"; go_process "proteolysis|0006508||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312135.1"; locus_tag "C7A06_RS02950"; product "outer membrane-stress sensor serine endopeptidase DegS"; protein_id "WP_000497723.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2544 NZ_CP027599.1 RefSeq gene 562057 563424 . - . gene_id "nbis-gene-505"; ID "nbis-gene-505"; Name "degQ"; gbkey "Gene"; gene "degQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02955";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2545 NZ_CP027599.1 RefSeq transcript 562057 563424 . - . gene_id "nbis-gene-505"; transcript_id "gene-C7A06_RS02955"; ID "gene-C7A06_RS02955"; Name "degQ"; Parent "nbis-gene-505"; gbkey "Gene"; gene "degQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02955"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2546 NZ_CP027599.1 Protein Homology exon 562057 563424 . - . gene_id "nbis-gene-505"; transcript_id "gene-C7A06_RS02955"; Dbxref "Genbank:WP_001295271.1"; ID "nbis-exon-518"; Name "WP_001295271.1"; Ontology_term "GO:0006508" "GO:0004252" "GO:0005515"; Parent "gene-C7A06_RS02955"; gbkey "CDS"; gene "degQ"; go_function "serine-type endopeptidase activity|0004252||IEA" "protein binding|0005515||IEA"; go_process "proteolysis|0006508||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417701.1"; locus_tag "C7A06_RS02955"; product "serine endoprotease DegQ"; protein_id "WP_001295271.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2547 NZ_CP027599.1 Protein Homology CDS 562057 563424 . - 0 gene_id "nbis-gene-505"; transcript_id "gene-C7A06_RS02955"; Dbxref "Genbank:WP_001295271.1"; ID "cds-WP_001295271.1"; Name "WP_001295271.1"; Ontology_term "GO:0006508" "GO:0004252" "GO:0005515"; Parent "gene-C7A06_RS02955"; gbkey "CDS"; gene "degQ"; go_function "serine-type endopeptidase activity|0004252||IEA" "protein binding|0005515||IEA"; go_process "proteolysis|0006508||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417701.1"; locus_tag "C7A06_RS02955"; product "serine endoprotease DegQ"; protein_id "WP_001295271.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2548 NZ_CP027599.1 RefSeq gene 563578 563976 . - . gene_id "nbis-gene-506"; ID "nbis-gene-506"; Name "zapG"; gbkey "Gene"; gene "zapG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02960";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2549 NZ_CP027599.1 RefSeq transcript 563578 563976 . - . gene_id "nbis-gene-506"; transcript_id "gene-C7A06_RS02960"; ID "gene-C7A06_RS02960"; Name "zapG"; Parent "nbis-gene-506"; gbkey "Gene"; gene "zapG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02960"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2550 NZ_CP027599.1 Protein Homology exon 563578 563976 . - . gene_id "nbis-gene-506"; transcript_id "gene-C7A06_RS02960"; Dbxref "Genbank:WP_001295270.1"; ID "nbis-exon-519"; Name "WP_001295270.1"; Parent "gene-C7A06_RS02960"; gbkey "CDS"; gene "zapG"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1"; locus_tag "C7A06_RS02960"; product "Z-ring associated protein ZapG"; protein_id "WP_001295270.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2551 NZ_CP027599.1 Protein Homology CDS 563578 563976 . - 0 gene_id "nbis-gene-506"; transcript_id "gene-C7A06_RS02960"; Dbxref "Genbank:WP_001295270.1"; ID "cds-WP_001295270.1"; Name "WP_001295270.1"; Parent "gene-C7A06_RS02960"; gbkey "CDS"; gene "zapG"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1"; locus_tag "C7A06_RS02960"; product "Z-ring associated protein ZapG"; protein_id "WP_001295270.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2552 NZ_CP027599.1 RefSeq gene 564170 565297 . + . gene_id "nbis-gene-507"; ID "nbis-gene-507"; Name "zapE"; gbkey "Gene"; gene "zapE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02965";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2553 NZ_CP027599.1 RefSeq transcript 564170 565297 . + . gene_id "nbis-gene-507"; transcript_id "gene-C7A06_RS02965"; ID "gene-C7A06_RS02965"; Name "zapE"; Parent "nbis-gene-507"; gbkey "Gene"; gene "zapE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02965"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2554 NZ_CP027599.1 Protein Homology exon 564170 565297 . + . gene_id "nbis-gene-507"; transcript_id "gene-C7A06_RS02965"; Dbxref "Genbank:WP_001192307.1"; ID "nbis-exon-520"; Name "WP_001192307.1"; Parent "gene-C7A06_RS02965"; gbkey "CDS"; gene "zapE"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312132.1"; locus_tag "C7A06_RS02965"; product "cell division protein ZapE"; protein_id "WP_001192307.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2555 NZ_CP027599.1 Protein Homology CDS 564170 565297 . + 0 gene_id "nbis-gene-507"; transcript_id "gene-C7A06_RS02965"; Dbxref "Genbank:WP_001192307.1"; ID "cds-WP_001192307.1"; Name "WP_001192307.1"; Parent "gene-C7A06_RS02965"; gbkey "CDS"; gene "zapE"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312132.1"; locus_tag "C7A06_RS02965"; product "cell division protein ZapE"; protein_id "WP_001192307.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2556 NZ_CP027599.1 RefSeq gene 565516 565944 . + . gene_id "nbis-gene-508"; ID "nbis-gene-508"; Name "rplM"; gbkey "Gene"; gene "rplM"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02970";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2557 NZ_CP027599.1 RefSeq transcript 565516 565944 . + . gene_id "nbis-gene-508"; transcript_id "gene-C7A06_RS02970"; ID "gene-C7A06_RS02970"; Name "rplM"; Parent "nbis-gene-508"; gbkey "Gene"; gene "rplM"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02970"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2558 NZ_CP027599.1 Protein Homology exon 565516 565944 . + . gene_id "nbis-gene-508"; transcript_id "gene-C7A06_RS02970"; Dbxref "Genbank:WP_000847559.1"; ID "nbis-exon-521"; Name "WP_000847559.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS02970"; gbkey "CDS"; gene "rplM"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1"; locus_tag "C7A06_RS02970"; product "50S ribosomal protein L13"; protein_id "WP_000847559.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2559 NZ_CP027599.1 Protein Homology CDS 565516 565944 . + 0 gene_id "nbis-gene-508"; transcript_id "gene-C7A06_RS02970"; Dbxref "Genbank:WP_000847559.1"; ID "cds-WP_000847559.1"; Name "WP_000847559.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS02970"; gbkey "CDS"; gene "rplM"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1"; locus_tag "C7A06_RS02970"; product "50S ribosomal protein L13"; protein_id "WP_000847559.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2560 NZ_CP027599.1 RefSeq gene 565960 566352 . + . gene_id "nbis-gene-509"; ID "nbis-gene-509"; Name "rpsI"; gbkey "Gene"; gene "rpsI"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02975";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2561 NZ_CP027599.1 RefSeq transcript 565960 566352 . + . gene_id "nbis-gene-509"; transcript_id "gene-C7A06_RS02975"; ID "gene-C7A06_RS02975"; Name "rpsI"; Parent "nbis-gene-509"; gbkey "Gene"; gene "rpsI"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02975"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2562 NZ_CP027599.1 Protein Homology exon 565960 566352 . + . gene_id "nbis-gene-509"; transcript_id "gene-C7A06_RS02975"; Dbxref "Genbank:WP_000829818.1"; ID "nbis-exon-522"; Name "WP_000829818.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0005840"; Parent "gene-C7A06_RS02975"; gbkey "CDS"; gene "rpsI"; go_component "ribosome|0005840||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1"; locus_tag "C7A06_RS02975"; product "30S ribosomal protein S9"; protein_id "WP_000829818.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2563 NZ_CP027599.1 Protein Homology CDS 565960 566352 . + 0 gene_id "nbis-gene-509"; transcript_id "gene-C7A06_RS02975"; Dbxref "Genbank:WP_000829818.1"; ID "cds-WP_000829818.1"; Name "WP_000829818.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0005840"; Parent "gene-C7A06_RS02975"; gbkey "CDS"; gene "rpsI"; go_component "ribosome|0005840||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1"; locus_tag "C7A06_RS02975"; product "30S ribosomal protein S9"; protein_id "WP_000829818.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2564 NZ_CP027599.1 RefSeq gene 566747 567385 . + . gene_id "nbis-gene-510"; ID "nbis-gene-510"; Name "sspA"; gbkey "Gene"; gene "sspA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02995";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2565 NZ_CP027599.1 RefSeq transcript 566747 567385 . + . gene_id "nbis-gene-510"; transcript_id "gene-C7A06_RS02995"; ID "gene-C7A06_RS02995"; Name "sspA"; Parent "nbis-gene-510"; gbkey "Gene"; gene "sspA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS02995"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2566 NZ_CP027599.1 Protein Homology exon 566747 567385 . + . gene_id "nbis-gene-510"; transcript_id "gene-C7A06_RS02995"; Dbxref "Genbank:WP_000257293.1"; ID "nbis-exon-523"; Name "WP_000257293.1"; Ontology_term "GO:0006749" "GO:0005515"; Parent "gene-C7A06_RS02995"; gbkey "CDS"; gene "sspA"; go_function "protein binding|0005515||IEA"; go_process "glutathione metabolic process|0006749||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312129.1"; locus_tag "C7A06_RS02995"; product "stringent starvation protein A"; protein_id "WP_000257293.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2567 NZ_CP027599.1 Protein Homology CDS 566747 567385 . + 0 gene_id "nbis-gene-510"; transcript_id "gene-C7A06_RS02995"; Dbxref "Genbank:WP_000257293.1"; ID "cds-WP_000257293.1"; Name "WP_000257293.1"; Ontology_term "GO:0006749" "GO:0005515"; Parent "gene-C7A06_RS02995"; gbkey "CDS"; gene "sspA"; go_function "protein binding|0005515||IEA"; go_process "glutathione metabolic process|0006749||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312129.1"; locus_tag "C7A06_RS02995"; product "stringent starvation protein A"; protein_id "WP_000257293.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2568 NZ_CP027599.1 RefSeq gene 567391 567888 . + . gene_id "nbis-gene-511"; ID "nbis-gene-511"; Name "sspB"; gbkey "Gene"; gene "sspB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03000";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2569 NZ_CP027599.1 RefSeq transcript 567391 567888 . + . gene_id "nbis-gene-511"; transcript_id "gene-C7A06_RS03000"; ID "gene-C7A06_RS03000"; Name "sspB"; Parent "nbis-gene-511"; gbkey "Gene"; gene "sspB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03000"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2570 NZ_CP027599.1 Protein Homology exon 567391 567888 . + . gene_id "nbis-gene-511"; transcript_id "gene-C7A06_RS03000"; Dbxref "Genbank:WP_000366129.1"; ID "nbis-exon-524"; Name "WP_000366129.1"; Parent "gene-C7A06_RS03000"; gbkey "CDS"; gene "sspB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312128.1"; locus_tag "C7A06_RS03000"; product "ClpXP protease specificity-enhancing factor"; protein_id "WP_000366129.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2571 NZ_CP027599.1 Protein Homology CDS 567391 567888 . + 0 gene_id "nbis-gene-511"; transcript_id "gene-C7A06_RS03000"; Dbxref "Genbank:WP_000366129.1"; ID "cds-WP_000366129.1"; Name "WP_000366129.1"; Parent "gene-C7A06_RS03000"; gbkey "CDS"; gene "sspB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312128.1"; locus_tag "C7A06_RS03000"; product "ClpXP protease specificity-enhancing factor"; protein_id "WP_000366129.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2572 NZ_CP027599.1 RefSeq gene 567931 569298 . - . gene_id "nbis-gene-512"; ID "nbis-gene-512"; Name "dcuC"; gbkey "Gene"; gene "dcuC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03005";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2573 NZ_CP027599.1 RefSeq transcript 567931 569298 . - . gene_id "nbis-gene-512"; transcript_id "gene-C7A06_RS03005"; ID "gene-C7A06_RS03005"; Name "dcuC"; Parent "nbis-gene-512"; gbkey "Gene"; gene "dcuC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03005"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2574 NZ_CP027599.1 Protein Homology exon 567931 569298 . - . gene_id "nbis-gene-512"; transcript_id "gene-C7A06_RS03005"; Dbxref "Genbank:WP_000466998.1"; ID "nbis-exon-525"; Name "WP_000466998.1"; Parent "gene-C7A06_RS03005"; gbkey "CDS"; gene "dcuC"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417694.1"; locus_tag "C7A06_RS03005"; product "anaerobic C4-dicarboxylate transporter DcuC"; protein_id "WP_000466998.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2575 NZ_CP027599.1 Protein Homology CDS 567931 569298 . - 0 gene_id "nbis-gene-512"; transcript_id "gene-C7A06_RS03005"; Dbxref "Genbank:WP_000466998.1"; ID "cds-WP_000466998.1"; Name "WP_000466998.1"; Parent "gene-C7A06_RS03005"; gbkey "CDS"; gene "dcuC"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417694.1"; locus_tag "C7A06_RS03005"; product "anaerobic C4-dicarboxylate transporter DcuC"; protein_id "WP_000466998.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2576 NZ_CP027599.1 RefSeq gene 569678 570469 . + . gene_id "nbis-gene-513"; ID "nbis-gene-513"; Name "nanR"; gbkey "Gene"; gene "nanR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03015";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2577 NZ_CP027599.1 RefSeq transcript 569678 570469 . + . gene_id "nbis-gene-513"; transcript_id "gene-C7A06_RS03015"; ID "gene-C7A06_RS03015"; Name "nanR"; Parent "nbis-gene-513"; gbkey "Gene"; gene "nanR"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03015"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2578 NZ_CP027599.1 Protein Homology exon 569678 570469 . + . gene_id "nbis-gene-513"; transcript_id "gene-C7A06_RS03015"; Dbxref "Genbank:WP_000523845.1"; ID "nbis-exon-526"; Name "WP_000523845.1"; Parent "gene-C7A06_RS03015"; gbkey "CDS"; gene "nanR"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417693.3"; locus_tag "C7A06_RS03015"; product "transcriptional regulator NanR"; protein_id "WP_000523845.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2579 NZ_CP027599.1 Protein Homology CDS 569678 570469 . + 0 gene_id "nbis-gene-513"; transcript_id "gene-C7A06_RS03015"; Dbxref "Genbank:WP_000523845.1"; ID "cds-WP_000523845.1"; Name "WP_000523845.1"; Parent "gene-C7A06_RS03015"; gbkey "CDS"; gene "nanR"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417693.3"; locus_tag "C7A06_RS03015"; product "transcriptional regulator NanR"; protein_id "WP_000523845.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2580 NZ_CP027599.1 RefSeq gene 570591 571484 . + . gene_id "nbis-gene-514"; ID "nbis-gene-514"; Name "nanA"; gbkey "Gene"; gene "nanA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03020";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2581 NZ_CP027599.1 RefSeq transcript 570591 571484 . + . gene_id "nbis-gene-514"; transcript_id "gene-C7A06_RS03020"; ID "gene-C7A06_RS03020"; Name "nanA"; Parent "nbis-gene-514"; gbkey "Gene"; gene "nanA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03020"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2582 NZ_CP027599.1 Protein Homology exon 570591 571484 . + . gene_id "nbis-gene-514"; transcript_id "gene-C7A06_RS03020"; Dbxref "Genbank:WP_000224714.1"; ID "nbis-exon-527"; Name "WP_000224714.1"; Ontology_term "GO:0006040" "GO:0009273" "GO:0008747"; Parent "gene-C7A06_RS03020"; gbkey "CDS"; gene "nanA"; go_function "N-acetylneuraminate lyase activity|0008747||IEA"; go_process "amino sugar metabolic process|0006040||IEA" "peptidoglycan-based cell wall biogenesis|0009273||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312125.1"; locus_tag "C7A06_RS03020"; product "N-acetylneuraminate lyase"; protein_id "WP_000224714.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2583 NZ_CP027599.1 Protein Homology CDS 570591 571484 . + 0 gene_id "nbis-gene-514"; transcript_id "gene-C7A06_RS03020"; Dbxref "Genbank:WP_000224714.1"; ID "cds-WP_000224714.1"; Name "WP_000224714.1"; Ontology_term "GO:0006040" "GO:0009273" "GO:0008747"; Parent "gene-C7A06_RS03020"; gbkey "CDS"; gene "nanA"; go_function "N-acetylneuraminate lyase activity|0008747||IEA"; go_process "amino sugar metabolic process|0006040||IEA" "peptidoglycan-based cell wall biogenesis|0009273||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312125.1"; locus_tag "C7A06_RS03020"; product "N-acetylneuraminate lyase"; protein_id "WP_000224714.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2584 NZ_CP027599.1 RefSeq gene 571594 573084 . + . gene_id "nbis-gene-515"; ID "nbis-gene-515"; Name "nanT"; gbkey "Gene"; gene "nanT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03025";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2585 NZ_CP027599.1 RefSeq transcript 571594 573084 . + . gene_id "nbis-gene-515"; transcript_id "gene-C7A06_RS03025"; ID "gene-C7A06_RS03025"; Name "nanT"; Parent "nbis-gene-515"; gbkey "Gene"; gene "nanT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03025"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2586 NZ_CP027599.1 Protein Homology exon 571594 573084 . + . gene_id "nbis-gene-515"; transcript_id "gene-C7A06_RS03025"; Dbxref "Genbank:WP_000108459.1"; ID "nbis-exon-528"; Name "WP_000108459.1"; Parent "gene-C7A06_RS03025"; gbkey "CDS"; gene "nanT"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312124.2"; locus_tag "C7A06_RS03025"; product "sialic acid transporter NanT"; protein_id "WP_000108459.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2587 NZ_CP027599.1 Protein Homology CDS 571594 573084 . + 0 gene_id "nbis-gene-515"; transcript_id "gene-C7A06_RS03025"; Dbxref "Genbank:WP_000108459.1"; ID "cds-WP_000108459.1"; Name "WP_000108459.1"; Parent "gene-C7A06_RS03025"; gbkey "CDS"; gene "nanT"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312124.2"; locus_tag "C7A06_RS03025"; product "sialic acid transporter NanT"; protein_id "WP_000108459.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2588 NZ_CP027599.1 RefSeq gene 573132 573821 . + . gene_id "nbis-gene-516"; ID "nbis-gene-516"; Name "nanE"; gbkey "Gene"; gene "nanE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03030";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2589 NZ_CP027599.1 RefSeq transcript 573132 573821 . + . gene_id "nbis-gene-516"; transcript_id "gene-C7A06_RS03030"; ID "gene-C7A06_RS03030"; Name "nanE"; Parent "nbis-gene-516"; gbkey "Gene"; gene "nanE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03030"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2590 NZ_CP027599.1 Protein Homology exon 573132 573821 . + . gene_id "nbis-gene-516"; transcript_id "gene-C7A06_RS03030"; Dbxref "Genbank:WP_000054239.1"; ID "nbis-exon-529"; Name "WP_000054239.1"; Parent "gene-C7A06_RS03030"; gbkey "CDS"; gene "nanE"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417690.1"; locus_tag "C7A06_RS03030"; product "N-acetylmannosamine-6-phosphate 2-epimerase"; protein_id "WP_000054239.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2591 NZ_CP027599.1 Protein Homology CDS 573132 573821 . + 0 gene_id "nbis-gene-516"; transcript_id "gene-C7A06_RS03030"; Dbxref "Genbank:WP_000054239.1"; ID "cds-WP_000054239.1"; Name "WP_000054239.1"; Parent "gene-C7A06_RS03030"; gbkey "CDS"; gene "nanE"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417690.1"; locus_tag "C7A06_RS03030"; product "N-acetylmannosamine-6-phosphate 2-epimerase"; protein_id "WP_000054239.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2592 NZ_CP027599.1 RefSeq gene 573818 574693 . + . gene_id "nbis-gene-517"; ID "nbis-gene-517"; Name "nanK"; gbkey "Gene"; gene "nanK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03035";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2593 NZ_CP027599.1 RefSeq transcript 573818 574693 . + . gene_id "nbis-gene-517"; transcript_id "gene-C7A06_RS03035"; ID "gene-C7A06_RS03035"; Name "nanK"; Parent "nbis-gene-517"; gbkey "Gene"; gene "nanK"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03035"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2594 NZ_CP027599.1 Protein Homology exon 573818 574693 . + . gene_id "nbis-gene-517"; transcript_id "gene-C7A06_RS03035"; Dbxref "Genbank:WP_000209021.1"; ID "nbis-exon-530"; Name "WP_000209021.1"; Parent "gene-C7A06_RS03035"; gbkey "CDS"; gene "nanK"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417689.4"; locus_tag "C7A06_RS03035"; product "N-acetylmannosamine kinase"; protein_id "WP_000209021.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2595 NZ_CP027599.1 Protein Homology CDS 573818 574693 . + 0 gene_id "nbis-gene-517"; transcript_id "gene-C7A06_RS03035"; Dbxref "Genbank:WP_000209021.1"; ID "cds-WP_000209021.1"; Name "WP_000209021.1"; Parent "gene-C7A06_RS03035"; gbkey "CDS"; gene "nanK"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417689.4"; locus_tag "C7A06_RS03035"; product "N-acetylmannosamine kinase"; protein_id "WP_000209021.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2596 NZ_CP027599.1 RefSeq gene 574690 575154 . + . gene_id "nbis-gene-518"; ID "nbis-gene-518"; Name "nanQ"; gbkey "Gene"; gene "nanQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03040";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2597 NZ_CP027599.1 RefSeq transcript 574690 575154 . + . gene_id "nbis-gene-518"; transcript_id "gene-C7A06_RS03040"; ID "gene-C7A06_RS03040"; Name "nanQ"; Parent "nbis-gene-518"; gbkey "Gene"; gene "nanQ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03040"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2598 NZ_CP027599.1 Protein Homology exon 574690 575154 . + . gene_id "nbis-gene-518"; transcript_id "gene-C7A06_RS03040"; Dbxref "Genbank:WP_000979882.1"; ID "nbis-exon-531"; Name "WP_000979882.1"; Ontology_term "GO:0006974"; Parent "gene-C7A06_RS03040"; gbkey "CDS"; gene "nanQ"; go_process "cellular response to DNA damage stimulus|0006974||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417688.1"; locus_tag "C7A06_RS03040"; product "N-acetylneuraminate anomerase"; protein_id "WP_000979882.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2599 NZ_CP027599.1 Protein Homology CDS 574690 575154 . + 0 gene_id "nbis-gene-518"; transcript_id "gene-C7A06_RS03040"; Dbxref "Genbank:WP_000979882.1"; ID "cds-WP_000979882.1"; Name "WP_000979882.1"; Ontology_term "GO:0006974"; Parent "gene-C7A06_RS03040"; gbkey "CDS"; gene "nanQ"; go_process "cellular response to DNA damage stimulus|0006974||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417688.1"; locus_tag "C7A06_RS03040"; product "N-acetylneuraminate anomerase"; protein_id "WP_000979882.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2600 NZ_CP027599.1 RefSeq gene 575214 576261 . - . gene_id "nbis-pseudogene-14"; ID "nbis-pseudogene-14"; Name "yhcG"; gbkey "Gene"; gene "yhcG"; gene_biotype "pseudogene"; locus_tag "C7A06_RS03045"; original_biotype "pseudogene"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2601 NZ_CP027599.1 RefSeq transcript 575214 576261 . - . gene_id "nbis-pseudogene-14"; transcript_id "gene-C7A06_RS03045"; ID "gene-C7A06_RS03045"; Name "yhcG"; Parent "nbis-pseudogene-14"; gbkey "Gene"; gene "yhcG"; gene_biotype "pseudogene"; locus_tag "C7A06_RS03045"; original_biotype "mrna"; pseudo "true";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2602 NZ_CP027599.1 Protein Homology exon 575214 576261 . - . gene_id "nbis-pseudogene-14"; transcript_id "gene-C7A06_RS03045"; ID "nbis-exon-532"; Note "frameshifted"; Parent "gene-C7A06_RS03045"; gbkey "CDS"; gene "yhcG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312120.1"; locus_tag "C7A06_RS03045"; product "PDDEXK nuclease domain-containing protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2603 NZ_CP027599.1 Protein Homology CDS 575214 576261 . - 0 gene_id "nbis-pseudogene-14"; transcript_id "gene-C7A06_RS03045"; ID "cds-C7A06_RS03045"; Note "frameshifted"; Parent "gene-C7A06_RS03045"; gbkey "CDS"; gene "yhcG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312120.1"; locus_tag "C7A06_RS03045"; product "PDDEXK nuclease domain-containing protein"; pseudo "true"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2604 NZ_CP027599.1 RefSeq gene 576445 577863 . - . gene_id "nbis-gene-519"; ID "nbis-gene-519"; Name "gltD"; gbkey "Gene"; gene "gltD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03050";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2605 NZ_CP027599.1 RefSeq transcript 576445 577863 . - . gene_id "nbis-gene-519"; transcript_id "gene-C7A06_RS03050"; ID "gene-C7A06_RS03050"; Name "gltD"; Parent "nbis-gene-519"; gbkey "Gene"; gene "gltD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03050"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2606 NZ_CP027599.1 Protein Homology exon 576445 577863 . - . gene_id "nbis-gene-519"; transcript_id "gene-C7A06_RS03050"; Dbxref "Genbank:WP_000081627.1"; ID "nbis-exon-533"; Name "WP_000081627.1"; Parent "gene-C7A06_RS03050"; gbkey "CDS"; gene "gltD"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1"; locus_tag "C7A06_RS03050"; product "glutamate synthase subunit GltD"; protein_id "WP_000081627.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2607 NZ_CP027599.1 Protein Homology CDS 576445 577863 . - 0 gene_id "nbis-gene-519"; transcript_id "gene-C7A06_RS03050"; Dbxref "Genbank:WP_000081627.1"; ID "cds-WP_000081627.1"; Name "WP_000081627.1"; Parent "gene-C7A06_RS03050"; gbkey "CDS"; gene "gltD"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1"; locus_tag "C7A06_RS03050"; product "glutamate synthase subunit GltD"; protein_id "WP_000081627.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2608 NZ_CP027599.1 RefSeq gene 577876 582336 . - . gene_id "nbis-gene-520"; ID "nbis-gene-520"; Name "gltB"; gbkey "Gene"; gene "gltB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03055";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2609 NZ_CP027599.1 RefSeq transcript 577876 582336 . - . gene_id "nbis-gene-520"; transcript_id "gene-C7A06_RS03055"; ID "gene-C7A06_RS03055"; Name "gltB"; Parent "nbis-gene-520"; gbkey "Gene"; gene "gltB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03055"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2610 NZ_CP027599.1 Protein Homology exon 577876 582336 . - . gene_id "nbis-gene-520"; transcript_id "gene-C7A06_RS03055"; Dbxref "Genbank:WP_001388534.1"; ID "nbis-exon-534"; Name "WP_001388534.1"; Ontology_term "GO:0006537" "GO:0006807" "GO:0003824" "GO:0015930" "GO:0016491"; Parent "gene-C7A06_RS03055"; gbkey "CDS"; gene "gltB"; go_function "catalytic activity|0003824||IEA" "glutamate synthase activity|0015930||IEA" "oxidoreductase activity|0016491||IEA"; go_process "glutamate biosynthetic process|0006537||IEA" "nitrogen compound metabolic process|0006807||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1"; locus_tag "C7A06_RS03055"; product "glutamate synthase large subunit"; protein_id "WP_001388534.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2611 NZ_CP027599.1 Protein Homology CDS 577876 582336 . - 0 gene_id "nbis-gene-520"; transcript_id "gene-C7A06_RS03055"; Dbxref "Genbank:WP_001388534.1"; ID "cds-WP_001388534.1"; Name "WP_001388534.1"; Ontology_term "GO:0006537" "GO:0006807" "GO:0003824" "GO:0015930" "GO:0016491"; Parent "gene-C7A06_RS03055"; gbkey "CDS"; gene "gltB"; go_function "catalytic activity|0003824||IEA" "glutamate synthase activity|0015930||IEA" "oxidoreductase activity|0016491||IEA"; go_process "glutamate biosynthetic process|0006537||IEA" "nitrogen compound metabolic process|0006807||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1"; locus_tag "C7A06_RS03055"; product "glutamate synthase large subunit"; protein_id "WP_001388534.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2612 NZ_CP027599.1 RefSeq gene 583011 583940 . + . gene_id "nbis-gene-521"; ID "nbis-gene-521"; Name "yhcC"; gbkey "Gene"; gene "yhcC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03070";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2613 NZ_CP027599.1 RefSeq transcript 583011 583940 . + . gene_id "nbis-gene-521"; transcript_id "gene-C7A06_RS03070"; ID "gene-C7A06_RS03070"; Name "yhcC"; Parent "nbis-gene-521"; gbkey "Gene"; gene "yhcC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03070"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2614 NZ_CP027599.1 Protein Homology exon 583011 583940 . + . gene_id "nbis-gene-521"; transcript_id "gene-C7A06_RS03070"; Dbxref "Genbank:WP_001176896.1"; ID "nbis-exon-535"; Name "WP_001176896.1"; Note "This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein."; Ontology_term "GO:1904047"; Parent "gene-C7A06_RS03070"; gbkey "CDS"; gene "yhcC"; go_function "S-adenosyl-L-methionine binding|1904047||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312117.1"; locus_tag "C7A06_RS03070"; product "TIGR01212 family radical SAM protein"; protein_id "WP_001176896.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2615 NZ_CP027599.1 Protein Homology CDS 583011 583940 . + 0 gene_id "nbis-gene-521"; transcript_id "gene-C7A06_RS03070"; Dbxref "Genbank:WP_001176896.1"; ID "cds-WP_001176896.1"; Name "WP_001176896.1"; Note "This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein."; Ontology_term "GO:1904047"; Parent "gene-C7A06_RS03070"; gbkey "CDS"; gene "yhcC"; go_function "S-adenosyl-L-methionine binding|1904047||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312117.1"; locus_tag "C7A06_RS03070"; product "TIGR01212 family radical SAM protein"; protein_id "WP_001176896.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2616 NZ_CP027599.1 RefSeq gene 584036 586372 . + . gene_id "nbis-gene-522"; ID "nbis-gene-522"; Name "arcB"; gbkey "Gene"; gene "arcB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03075";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2617 NZ_CP027599.1 RefSeq transcript 584036 586372 . + . gene_id "nbis-gene-522"; transcript_id "gene-C7A06_RS03075"; ID "gene-C7A06_RS03075"; Name "arcB"; Parent "nbis-gene-522"; gbkey "Gene"; gene "arcB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03075"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2618 NZ_CP027599.1 Protein Homology exon 584036 586372 . + . gene_id "nbis-gene-522"; transcript_id "gene-C7A06_RS03075"; Dbxref "Genbank:WP_000809774.1"; ID "nbis-exon-536"; Name "WP_000809774.1"; Ontology_term "GO:0000160" "GO:0006355" "GO:0016310" "GO:0000155" "GO:0016021"; Parent "gene-C7A06_RS03075"; gbkey "CDS"; gene "arcB"; go_component "integral component of membrane|0016021||IEA"; go_function "phosphorelay sensor kinase activity|0000155||IEA"; go_process "phosphorelay signal transduction system|0000160||IEA" "regulation of transcription, DNA-templated|0006355||IEA" "phosphorylation|0016310||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709008.1"; locus_tag "C7A06_RS03075"; product "aerobic respiration two-component sensor histidine kinase ArcB"; protein_id "WP_000809774.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2619 NZ_CP027599.1 Protein Homology CDS 584036 586372 . + 0 gene_id "nbis-gene-522"; transcript_id "gene-C7A06_RS03075"; Dbxref "Genbank:WP_000809774.1"; ID "cds-WP_000809774.1"; Name "WP_000809774.1"; Ontology_term "GO:0000160" "GO:0006355" "GO:0016310" "GO:0000155" "GO:0016021"; Parent "gene-C7A06_RS03075"; gbkey "CDS"; gene "arcB"; go_component "integral component of membrane|0016021||IEA"; go_function "phosphorelay sensor kinase activity|0000155||IEA"; go_process "phosphorelay signal transduction system|0000160||IEA" "regulation of transcription, DNA-templated|0006355||IEA" "phosphorylation|0016310||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709008.1"; locus_tag "C7A06_RS03075"; product "aerobic respiration two-component sensor histidine kinase ArcB"; protein_id "WP_000809774.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2620 NZ_CP027599.1 RefSeq gene 586602 587255 . + . gene_id "nbis-gene-523"; ID "nbis-gene-523"; Name "elbB"; gbkey "Gene"; gene "elbB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03080";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2621 NZ_CP027599.1 RefSeq transcript 586602 587255 . + . gene_id "nbis-gene-523"; transcript_id "gene-C7A06_RS03080"; ID "gene-C7A06_RS03080"; Name "elbB"; Parent "nbis-gene-523"; gbkey "Gene"; gene "elbB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03080"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2622 NZ_CP027599.1 Protein Homology exon 586602 587255 . + . gene_id "nbis-gene-523"; transcript_id "gene-C7A06_RS03080"; Dbxref "Genbank:WP_001299134.1"; ID "nbis-exon-537"; Name "WP_001299134.1"; Parent "gene-C7A06_RS03080"; gbkey "CDS"; gene "elbB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709007.2"; locus_tag "C7A06_RS03080"; product "isoprenoid biosynthesis glyoxalase ElbB"; protein_id "WP_001299134.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2623 NZ_CP027599.1 Protein Homology CDS 586602 587255 . + 0 gene_id "nbis-gene-523"; transcript_id "gene-C7A06_RS03080"; Dbxref "Genbank:WP_001299134.1"; ID "cds-WP_001299134.1"; Name "WP_001299134.1"; Parent "gene-C7A06_RS03080"; gbkey "CDS"; gene "elbB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709007.2"; locus_tag "C7A06_RS03080"; product "isoprenoid biosynthesis glyoxalase ElbB"; protein_id "WP_001299134.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2624 NZ_CP027599.1 RefSeq gene 587252 587980 . + . gene_id "nbis-gene-524"; ID "nbis-gene-524"; Name "mtgA"; gbkey "Gene"; gene "mtgA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03085";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2625 NZ_CP027599.1 RefSeq transcript 587252 587980 . + . gene_id "nbis-gene-524"; transcript_id "gene-C7A06_RS03085"; ID "gene-C7A06_RS03085"; Name "mtgA"; Parent "nbis-gene-524"; gbkey "Gene"; gene "mtgA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03085"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2626 NZ_CP027599.1 Protein Homology exon 587252 587980 . + . gene_id "nbis-gene-524"; transcript_id "gene-C7A06_RS03085"; Dbxref "Genbank:WP_000047091.1"; ID "nbis-exon-538"; Name "WP_000047091.1"; Ontology_term "GO:0009252" "GO:0009274" "GO:0016021"; Parent "gene-C7A06_RS03085"; gbkey "CDS"; gene "mtgA"; go_component "peptidoglycan-based cell wall|0009274||IEA" "integral component of membrane|0016021||IEA"; go_process "peptidoglycan biosynthetic process|0009252||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417675.1"; locus_tag "C7A06_RS03085"; product "monofunctional biosynthetic peptidoglycan transglycosylase"; protein_id "WP_000047091.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2627 NZ_CP027599.1 Protein Homology CDS 587252 587980 . + 0 gene_id "nbis-gene-524"; transcript_id "gene-C7A06_RS03085"; Dbxref "Genbank:WP_000047091.1"; ID "cds-WP_000047091.1"; Name "WP_000047091.1"; Ontology_term "GO:0009252" "GO:0009274" "GO:0016021"; Parent "gene-C7A06_RS03085"; gbkey "CDS"; gene "mtgA"; go_component "peptidoglycan-based cell wall|0009274||IEA" "integral component of membrane|0016021||IEA"; go_process "peptidoglycan biosynthetic process|0009252||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417675.1"; locus_tag "C7A06_RS03085"; product "monofunctional biosynthetic peptidoglycan transglycosylase"; protein_id "WP_000047091.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2628 NZ_CP027599.1 RefSeq gene 587977 588609 . - . gene_id "nbis-gene-525"; ID "nbis-gene-525"; Name "yrbL"; gbkey "Gene"; gene "yrbL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03090";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2629 NZ_CP027599.1 RefSeq transcript 587977 588609 . - . gene_id "nbis-gene-525"; transcript_id "gene-C7A06_RS03090"; ID "gene-C7A06_RS03090"; Name "yrbL"; Parent "nbis-gene-525"; gbkey "Gene"; gene "yrbL"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03090"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2630 NZ_CP027599.1 Protein Homology exon 587977 588609 . - . gene_id "nbis-gene-525"; transcript_id "gene-C7A06_RS03090"; Dbxref "Genbank:WP_000620405.1"; ID "nbis-exon-539"; Name "WP_000620405.1"; Parent "gene-C7A06_RS03090"; gbkey "CDS"; gene "yrbL"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417674.1"; locus_tag "C7A06_RS03090"; product "PhoP regulatory network protein YrbL"; protein_id "WP_000620405.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2631 NZ_CP027599.1 Protein Homology CDS 587977 588609 . - 0 gene_id "nbis-gene-525"; transcript_id "gene-C7A06_RS03090"; Dbxref "Genbank:WP_000620405.1"; ID "cds-WP_000620405.1"; Name "WP_000620405.1"; Parent "gene-C7A06_RS03090"; gbkey "CDS"; gene "yrbL"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417674.1"; locus_tag "C7A06_RS03090"; product "PhoP regulatory network protein YrbL"; protein_id "WP_000620405.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2632 NZ_CP027599.1 RefSeq gene 588823 589095 . - . gene_id "nbis-gene-526"; ID "nbis-gene-526"; Name "npr"; gbkey "Gene"; gene "npr"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03095";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2633 NZ_CP027599.1 RefSeq transcript 588823 589095 . - . gene_id "nbis-gene-526"; transcript_id "gene-C7A06_RS03095"; ID "gene-C7A06_RS03095"; Name "npr"; Parent "nbis-gene-526"; gbkey "Gene"; gene "npr"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03095"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2634 NZ_CP027599.1 Protein Homology exon 588823 589095 . - . gene_id "nbis-gene-526"; transcript_id "gene-C7A06_RS03095"; Dbxref "Genbank:WP_000216791.1"; ID "nbis-exon-540"; Name "WP_000216791.1"; Parent "gene-C7A06_RS03095"; gbkey "CDS"; gene "npr"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1"; locus_tag "C7A06_RS03095"; product "PTS phosphocarrier protein NPr"; protein_id "WP_000216791.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2635 NZ_CP027599.1 Protein Homology CDS 588823 589095 . - 0 gene_id "nbis-gene-526"; transcript_id "gene-C7A06_RS03095"; Dbxref "Genbank:WP_000216791.1"; ID "cds-WP_000216791.1"; Name "WP_000216791.1"; Parent "gene-C7A06_RS03095"; gbkey "CDS"; gene "npr"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1"; locus_tag "C7A06_RS03095"; product "PTS phosphocarrier protein NPr"; protein_id "WP_000216791.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2636 NZ_CP027599.1 RefSeq gene 589092 589946 . - . gene_id "nbis-gene-527"; ID "nbis-gene-527"; Name "rapZ"; gbkey "Gene"; gene "rapZ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03100";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2637 NZ_CP027599.1 RefSeq transcript 589092 589946 . - . gene_id "nbis-gene-527"; transcript_id "gene-C7A06_RS03100"; ID "gene-C7A06_RS03100"; Name "rapZ"; Parent "nbis-gene-527"; gbkey "Gene"; gene "rapZ"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03100"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2638 NZ_CP027599.1 Protein Homology exon 589092 589946 . - . gene_id "nbis-gene-527"; transcript_id "gene-C7A06_RS03100"; Dbxref "Genbank:WP_000243741.1"; ID "nbis-exon-541"; Name "WP_000243741.1"; Ontology_term "GO:0005524"; Parent "gene-C7A06_RS03100"; gbkey "CDS"; gene "rapZ"; go_function "ATP binding|0005524||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312111.1"; locus_tag "C7A06_RS03100"; product "RNase adapter RapZ"; protein_id "WP_000243741.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2639 NZ_CP027599.1 Protein Homology CDS 589092 589946 . - 0 gene_id "nbis-gene-527"; transcript_id "gene-C7A06_RS03100"; Dbxref "Genbank:WP_000243741.1"; ID "cds-WP_000243741.1"; Name "WP_000243741.1"; Ontology_term "GO:0005524"; Parent "gene-C7A06_RS03100"; gbkey "CDS"; gene "rapZ"; go_function "ATP binding|0005524||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312111.1"; locus_tag "C7A06_RS03100"; product "RNase adapter RapZ"; protein_id "WP_000243741.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2640 NZ_CP027599.1 RefSeq gene 589992 590483 . - . gene_id "nbis-gene-528"; ID "nbis-gene-528"; Name "ptsN"; gbkey "Gene"; gene "ptsN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03105";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2641 NZ_CP027599.1 RefSeq transcript 589992 590483 . - . gene_id "nbis-gene-528"; transcript_id "gene-C7A06_RS03105"; ID "gene-C7A06_RS03105"; Name "ptsN"; Parent "nbis-gene-528"; gbkey "Gene"; gene "ptsN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03105"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2642 NZ_CP027599.1 Protein Homology exon 589992 590483 . - . gene_id "nbis-gene-528"; transcript_id "gene-C7A06_RS03105"; Dbxref "Genbank:WP_000183676.1"; ID "nbis-exon-542"; Name "WP_000183676.1"; Parent "gene-C7A06_RS03105"; gbkey "CDS"; gene "ptsN"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417671.1"; locus_tag "C7A06_RS03105"; product "PTS IIA-like nitrogen regulatory protein PtsN"; protein_id "WP_000183676.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2643 NZ_CP027599.1 Protein Homology CDS 589992 590483 . - 0 gene_id "nbis-gene-528"; transcript_id "gene-C7A06_RS03105"; Dbxref "Genbank:WP_000183676.1"; ID "cds-WP_000183676.1"; Name "WP_000183676.1"; Parent "gene-C7A06_RS03105"; gbkey "CDS"; gene "ptsN"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417671.1"; locus_tag "C7A06_RS03105"; product "PTS IIA-like nitrogen regulatory protein PtsN"; protein_id "WP_000183676.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2644 NZ_CP027599.1 RefSeq gene 590601 590888 . - . gene_id "nbis-gene-529"; ID "nbis-gene-529"; Name "hpf"; gbkey "Gene"; gene "hpf"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03110";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2645 NZ_CP027599.1 RefSeq transcript 590601 590888 . - . gene_id "nbis-gene-529"; transcript_id "gene-C7A06_RS03110"; ID "gene-C7A06_RS03110"; Name "hpf"; Parent "nbis-gene-529"; gbkey "Gene"; gene "hpf"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03110"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2646 NZ_CP027599.1 Protein Homology exon 590601 590888 . - . gene_id "nbis-gene-529"; transcript_id "gene-C7A06_RS03110"; Dbxref "Genbank:WP_001176599.1"; ID "nbis-exon-543"; Name "WP_001176599.1"; Ontology_term "GO:0044238"; Parent "gene-C7A06_RS03110"; gbkey "CDS"; gene "hpf"; go_process "primary metabolic process|0044238||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312109.1"; locus_tag "C7A06_RS03110"; product "ribosome hibernation promoting factor"; protein_id "WP_001176599.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2647 NZ_CP027599.1 Protein Homology CDS 590601 590888 . - 0 gene_id "nbis-gene-529"; transcript_id "gene-C7A06_RS03110"; Dbxref "Genbank:WP_001176599.1"; ID "cds-WP_001176599.1"; Name "WP_001176599.1"; Ontology_term "GO:0044238"; Parent "gene-C7A06_RS03110"; gbkey "CDS"; gene "hpf"; go_process "primary metabolic process|0044238||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312109.1"; locus_tag "C7A06_RS03110"; product "ribosome hibernation promoting factor"; protein_id "WP_001176599.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2648 NZ_CP027599.1 RefSeq gene 590911 592344 . - . gene_id "nbis-gene-530"; ID "nbis-gene-530"; Name "rpoN"; gbkey "Gene"; gene "rpoN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03115";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2649 NZ_CP027599.1 RefSeq transcript 590911 592344 . - . gene_id "nbis-gene-530"; transcript_id "gene-C7A06_RS03115"; ID "gene-C7A06_RS03115"; Name "rpoN"; Parent "nbis-gene-530"; gbkey "Gene"; gene "rpoN"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03115"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2650 NZ_CP027599.1 Protein Homology exon 590911 592344 . - . gene_id "nbis-gene-530"; transcript_id "gene-C7A06_RS03115"; Dbxref "Genbank:WP_000809051.1"; ID "nbis-exon-544"; Name "WP_000809051.1"; Ontology_term "GO:0006352" "GO:0001216" "GO:0003677" "GO:0016987"; Parent "gene-C7A06_RS03115"; gbkey "CDS"; gene "rpoN"; go_function "DNA-binding transcription activator activity|0001216||IEA" "DNA binding|0003677||IEA" "sigma factor activity|0016987||IEA"; go_process "DNA-templated transcription, initiation|0006352||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312108.1"; locus_tag "C7A06_RS03115"; product "RNA polymerase factor sigma-54"; protein_id "WP_000809051.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2651 NZ_CP027599.1 Protein Homology CDS 590911 592344 . - 0 gene_id "nbis-gene-530"; transcript_id "gene-C7A06_RS03115"; Dbxref "Genbank:WP_000809051.1"; ID "cds-WP_000809051.1"; Name "WP_000809051.1"; Ontology_term "GO:0006352" "GO:0001216" "GO:0003677" "GO:0016987"; Parent "gene-C7A06_RS03115"; gbkey "CDS"; gene "rpoN"; go_function "DNA-binding transcription activator activity|0001216||IEA" "DNA binding|0003677||IEA" "sigma factor activity|0016987||IEA"; go_process "DNA-templated transcription, initiation|0006352||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312108.1"; locus_tag "C7A06_RS03115"; product "RNA polymerase factor sigma-54"; protein_id "WP_000809051.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2652 NZ_CP027599.1 RefSeq gene 592392 593117 . - . gene_id "nbis-gene-531"; ID "nbis-gene-531"; Name "lptB"; gbkey "Gene"; gene "lptB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03120";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2653 NZ_CP027599.1 RefSeq transcript 592392 593117 . - . gene_id "nbis-gene-531"; transcript_id "gene-C7A06_RS03120"; ID "gene-C7A06_RS03120"; Name "lptB"; Parent "nbis-gene-531"; gbkey "Gene"; gene "lptB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03120"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2654 NZ_CP027599.1 Protein Homology exon 592392 593117 . - . gene_id "nbis-gene-531"; transcript_id "gene-C7A06_RS03120"; Dbxref "Genbank:WP_000224099.1"; ID "nbis-exon-545"; Name "WP_000224099.1"; Ontology_term "GO:0055085" "GO:0005524" "GO:0043190"; Parent "gene-C7A06_RS03120"; gbkey "CDS"; gene "lptB"; go_component "ATP-binding cassette (ABC) transporter complex|0043190||IEA"; go_function "ATP binding|0005524||IEA"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1"; locus_tag "C7A06_RS03120"; product "LPS export ABC transporter ATP-binding protein"; protein_id "WP_000224099.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2655 NZ_CP027599.1 Protein Homology CDS 592392 593117 . - 0 gene_id "nbis-gene-531"; transcript_id "gene-C7A06_RS03120"; Dbxref "Genbank:WP_000224099.1"; ID "cds-WP_000224099.1"; Name "WP_000224099.1"; Ontology_term "GO:0055085" "GO:0005524" "GO:0043190"; Parent "gene-C7A06_RS03120"; gbkey "CDS"; gene "lptB"; go_component "ATP-binding cassette (ABC) transporter complex|0043190||IEA"; go_function "ATP binding|0005524||IEA"; go_process "transmembrane transport|0055085||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1"; locus_tag "C7A06_RS03120"; product "LPS export ABC transporter ATP-binding protein"; protein_id "WP_000224099.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2656 NZ_CP027599.1 RefSeq gene 593124 593681 . - . gene_id "nbis-gene-532"; ID "nbis-gene-532"; Name "lptA"; gbkey "Gene"; gene "lptA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03125";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2657 NZ_CP027599.1 RefSeq transcript 593124 593681 . - . gene_id "nbis-gene-532"; transcript_id "gene-C7A06_RS03125"; ID "gene-C7A06_RS03125"; Name "lptA"; Parent "nbis-gene-532"; gbkey "Gene"; gene "lptA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03125"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2658 NZ_CP027599.1 Protein Homology exon 593124 593681 . - . gene_id "nbis-gene-532"; transcript_id "gene-C7A06_RS03125"; Dbxref "Genbank:WP_000669785.1"; ID "nbis-exon-546"; Name "WP_000669785.1"; Parent "gene-C7A06_RS03125"; gbkey "CDS"; gene "lptA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312106.1"; locus_tag "C7A06_RS03125"; product "lipopolysaccharide ABC transporter substrate-binding protein LptA"; protein_id "WP_000669785.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2659 NZ_CP027599.1 Protein Homology CDS 593124 593681 . - 0 gene_id "nbis-gene-532"; transcript_id "gene-C7A06_RS03125"; Dbxref "Genbank:WP_000669785.1"; ID "cds-WP_000669785.1"; Name "WP_000669785.1"; Parent "gene-C7A06_RS03125"; gbkey "CDS"; gene "lptA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312106.1"; locus_tag "C7A06_RS03125"; product "lipopolysaccharide ABC transporter substrate-binding protein LptA"; protein_id "WP_000669785.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2660 NZ_CP027599.1 RefSeq gene 593650 594225 . - . gene_id "nbis-gene-533"; ID "nbis-gene-533"; Name "lptC"; gbkey "Gene"; gene "lptC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03130";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2661 NZ_CP027599.1 RefSeq transcript 593650 594225 . - . gene_id "nbis-gene-533"; transcript_id "gene-C7A06_RS03130"; ID "gene-C7A06_RS03130"; Name "lptC"; Parent "nbis-gene-533"; gbkey "Gene"; gene "lptC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03130"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2662 NZ_CP027599.1 Protein Homology exon 593650 594225 . - . gene_id "nbis-gene-533"; transcript_id "gene-C7A06_RS03130"; Dbxref "Genbank:WP_000030537.1"; ID "nbis-exon-547"; Name "WP_000030537.1"; Parent "gene-C7A06_RS03130"; gbkey "CDS"; gene "lptC"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312105.1"; locus_tag "C7A06_RS03130"; product "LPS export ABC transporter periplasmic protein LptC"; protein_id "WP_000030537.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2663 NZ_CP027599.1 Protein Homology CDS 593650 594225 . - 0 gene_id "nbis-gene-533"; transcript_id "gene-C7A06_RS03130"; Dbxref "Genbank:WP_000030537.1"; ID "cds-WP_000030537.1"; Name "WP_000030537.1"; Parent "gene-C7A06_RS03130"; gbkey "CDS"; gene "lptC"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312105.1"; locus_tag "C7A06_RS03130"; product "LPS export ABC transporter periplasmic protein LptC"; protein_id "WP_000030537.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2664 NZ_CP027599.1 RefSeq gene 594222 594788 . - . gene_id "nbis-gene-534"; ID "nbis-gene-534"; Name "kdsC"; gbkey "Gene"; gene "kdsC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03135";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2665 NZ_CP027599.1 RefSeq transcript 594222 594788 . - . gene_id "nbis-gene-534"; transcript_id "gene-C7A06_RS03135"; ID "gene-C7A06_RS03135"; Name "kdsC"; Parent "nbis-gene-534"; gbkey "Gene"; gene "kdsC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03135"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2666 NZ_CP027599.1 Protein Homology exon 594222 594788 . - . gene_id "nbis-gene-534"; transcript_id "gene-C7A06_RS03135"; Dbxref "Genbank:WP_000030018.1"; ID "nbis-exon-548"; Name "WP_000030018.1"; Ontology_term "GO:0016788"; Parent "gene-C7A06_RS03135"; gbkey "CDS"; gene "kdsC"; go_function "hydrolase activity, acting on ester bonds|0016788||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_708997.1"; locus_tag "C7A06_RS03135"; product "3-deoxy-manno-octulosonate-8-phosphatase KdsC"; protein_id "WP_000030018.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2667 NZ_CP027599.1 Protein Homology CDS 594222 594788 . - 0 gene_id "nbis-gene-534"; transcript_id "gene-C7A06_RS03135"; Dbxref "Genbank:WP_000030018.1"; ID "cds-WP_000030018.1"; Name "WP_000030018.1"; Ontology_term "GO:0016788"; Parent "gene-C7A06_RS03135"; gbkey "CDS"; gene "kdsC"; go_function "hydrolase activity, acting on ester bonds|0016788||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_708997.1"; locus_tag "C7A06_RS03135"; product "3-deoxy-manno-octulosonate-8-phosphatase KdsC"; protein_id "WP_000030018.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2668 NZ_CP027599.1 RefSeq gene 594809 595795 . - . gene_id "nbis-gene-535"; ID "nbis-gene-535"; Name "kdsD"; gbkey "Gene"; gene "kdsD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03140";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2669 NZ_CP027599.1 RefSeq transcript 594809 595795 . - . gene_id "nbis-gene-535"; transcript_id "gene-C7A06_RS03140"; ID "gene-C7A06_RS03140"; Name "kdsD"; Parent "nbis-gene-535"; gbkey "Gene"; gene "kdsD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03140"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2670 NZ_CP027599.1 Protein Homology exon 594809 595795 . - . gene_id "nbis-gene-535"; transcript_id "gene-C7A06_RS03140"; Dbxref "Genbank:WP_001295557.1"; ID "nbis-exon-549"; Name "WP_001295557.1"; Ontology_term "GO:1901135" "GO:0016853" "GO:0097367"; Parent "gene-C7A06_RS03140"; gbkey "CDS"; gene "kdsD"; go_function "isomerase activity|0016853||IEA" "carbohydrate derivative binding|0097367||IEA"; go_process "carbohydrate derivative metabolic process|1901135||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417664.1"; locus_tag "C7A06_RS03140"; product "arabinose-5-phosphate isomerase KdsD"; protein_id "WP_001295557.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2671 NZ_CP027599.1 Protein Homology CDS 594809 595795 . - 0 gene_id "nbis-gene-535"; transcript_id "gene-C7A06_RS03140"; Dbxref "Genbank:WP_001295557.1"; ID "cds-WP_001295557.1"; Name "WP_001295557.1"; Ontology_term "GO:1901135" "GO:0016853" "GO:0097367"; Parent "gene-C7A06_RS03140"; gbkey "CDS"; gene "kdsD"; go_function "isomerase activity|0016853||IEA" "carbohydrate derivative binding|0097367||IEA"; go_process "carbohydrate derivative metabolic process|1901135||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417664.1"; locus_tag "C7A06_RS03140"; product "arabinose-5-phosphate isomerase KdsD"; protein_id "WP_001295557.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2672 NZ_CP027599.1 RefSeq gene 595809 596786 . - . gene_id "nbis-gene-536"; ID "nbis-gene-536"; Name "yrbG"; gbkey "Gene"; gene "yrbG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03145";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2673 NZ_CP027599.1 RefSeq transcript 595809 596786 . - . gene_id "nbis-gene-536"; transcript_id "gene-C7A06_RS03145"; ID "gene-C7A06_RS03145"; Name "yrbG"; Parent "nbis-gene-536"; gbkey "Gene"; gene "yrbG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03145"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2674 NZ_CP027599.1 Protein Homology exon 595809 596786 . - . gene_id "nbis-gene-536"; transcript_id "gene-C7A06_RS03145"; Dbxref "Genbank:WP_000922901.1"; ID "nbis-exon-550"; Name "WP_000922901.1"; Parent "gene-C7A06_RS03145"; gbkey "CDS"; gene "yrbG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417663.1"; locus_tag "C7A06_RS03145"; product "calcium/sodium antiporter"; protein_id "WP_000922901.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2675 NZ_CP027599.1 Protein Homology CDS 595809 596786 . - 0 gene_id "nbis-gene-536"; transcript_id "gene-C7A06_RS03145"; Dbxref "Genbank:WP_000922901.1"; ID "cds-WP_000922901.1"; Name "WP_000922901.1"; Parent "gene-C7A06_RS03145"; gbkey "CDS"; gene "yrbG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417663.1"; locus_tag "C7A06_RS03145"; product "calcium/sodium antiporter"; protein_id "WP_000922901.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2676 NZ_CP027599.1 RefSeq gene 596996 597805 . + . gene_id "nbis-gene-537"; ID "nbis-gene-537"; Name "mlaF"; gbkey "Gene"; gene "mlaF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03150";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2677 NZ_CP027599.1 RefSeq transcript 596996 597805 . + . gene_id "nbis-gene-537"; transcript_id "gene-C7A06_RS03150"; ID "gene-C7A06_RS03150"; Name "mlaF"; Parent "nbis-gene-537"; gbkey "Gene"; gene "mlaF"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03150"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2678 NZ_CP027599.1 Protein Homology exon 596996 597805 . + . gene_id "nbis-gene-537"; transcript_id "gene-C7A06_RS03150"; Dbxref "Genbank:WP_000438245.1"; ID "nbis-exon-551"; Name "WP_000438245.1"; Ontology_term "GO:0005524"; Parent "gene-C7A06_RS03150"; gbkey "CDS"; gene "mlaF"; go_function "ATP binding|0005524||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312101.1"; locus_tag "C7A06_RS03150"; product "phospholipid ABC transporter ATP-binding protein MlaF"; protein_id "WP_000438245.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2679 NZ_CP027599.1 Protein Homology CDS 596996 597805 . + 0 gene_id "nbis-gene-537"; transcript_id "gene-C7A06_RS03150"; Dbxref "Genbank:WP_000438245.1"; ID "cds-WP_000438245.1"; Name "WP_000438245.1"; Ontology_term "GO:0005524"; Parent "gene-C7A06_RS03150"; gbkey "CDS"; gene "mlaF"; go_function "ATP binding|0005524||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312101.1"; locus_tag "C7A06_RS03150"; product "phospholipid ABC transporter ATP-binding protein MlaF"; protein_id "WP_000438245.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2680 NZ_CP027599.1 RefSeq gene 597813 598595 . + . gene_id "nbis-gene-538"; ID "nbis-gene-538"; Name "mlaE"; gbkey "Gene"; gene "mlaE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03155";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2681 NZ_CP027599.1 RefSeq transcript 597813 598595 . + . gene_id "nbis-gene-538"; transcript_id "gene-C7A06_RS03155"; ID "gene-C7A06_RS03155"; Name "mlaE"; Parent "nbis-gene-538"; gbkey "Gene"; gene "mlaE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03155"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2682 NZ_CP027599.1 Protein Homology exon 597813 598595 . + . gene_id "nbis-gene-538"; transcript_id "gene-C7A06_RS03155"; Dbxref "Genbank:WP_000925795.1"; ID "nbis-exon-552"; Name "WP_000925795.1"; Ontology_term "GO:0043190"; Parent "gene-C7A06_RS03155"; gbkey "CDS"; gene "mlaE"; go_component "ATP-binding cassette (ABC) transporter complex|0043190||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1"; locus_tag "C7A06_RS03155"; product "lipid asymmetry maintenance ABC transporter permease subunit MlaE"; protein_id "WP_000925795.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2683 NZ_CP027599.1 Protein Homology CDS 597813 598595 . + 0 gene_id "nbis-gene-538"; transcript_id "gene-C7A06_RS03155"; Dbxref "Genbank:WP_000925795.1"; ID "cds-WP_000925795.1"; Name "WP_000925795.1"; Ontology_term "GO:0043190"; Parent "gene-C7A06_RS03155"; gbkey "CDS"; gene "mlaE"; go_component "ATP-binding cassette (ABC) transporter complex|0043190||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1"; locus_tag "C7A06_RS03155"; product "lipid asymmetry maintenance ABC transporter permease subunit MlaE"; protein_id "WP_000925795.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2684 NZ_CP027599.1 RefSeq gene 598600 599151 . + . gene_id "nbis-gene-539"; ID "nbis-gene-539"; Name "mlaD"; gbkey "Gene"; gene "mlaD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03160";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2685 NZ_CP027599.1 RefSeq transcript 598600 599151 . + . gene_id "nbis-gene-539"; transcript_id "gene-C7A06_RS03160"; ID "gene-C7A06_RS03160"; Name "mlaD"; Parent "nbis-gene-539"; gbkey "Gene"; gene "mlaD"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03160"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2686 NZ_CP027599.1 Protein Homology exon 598600 599151 . + . gene_id "nbis-gene-539"; transcript_id "gene-C7A06_RS03160"; Dbxref "Genbank:WP_001296448.1"; ID "nbis-exon-553"; Name "WP_001296448.1"; Ontology_term "GO:0015914"; Parent "gene-C7A06_RS03160"; gbkey "CDS"; gene "mlaD"; go_process "phospholipid transport|0015914||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312099.1"; locus_tag "C7A06_RS03160"; product "outer membrane lipid asymmetry maintenance protein MlaD"; protein_id "WP_001296448.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2687 NZ_CP027599.1 Protein Homology CDS 598600 599151 . + 0 gene_id "nbis-gene-539"; transcript_id "gene-C7A06_RS03160"; Dbxref "Genbank:WP_001296448.1"; ID "cds-WP_001296448.1"; Name "WP_001296448.1"; Ontology_term "GO:0015914"; Parent "gene-C7A06_RS03160"; gbkey "CDS"; gene "mlaD"; go_process "phospholipid transport|0015914||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312099.1"; locus_tag "C7A06_RS03160"; product "outer membrane lipid asymmetry maintenance protein MlaD"; protein_id "WP_001296448.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2688 NZ_CP027599.1 RefSeq gene 599170 599805 . + . gene_id "nbis-gene-540"; ID "nbis-gene-540"; Name "mlaC"; gbkey "Gene"; gene "mlaC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03165";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2689 NZ_CP027599.1 RefSeq transcript 599170 599805 . + . gene_id "nbis-gene-540"; transcript_id "gene-C7A06_RS03165"; ID "gene-C7A06_RS03165"; Name "mlaC"; Parent "nbis-gene-540"; gbkey "Gene"; gene "mlaC"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03165"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2690 NZ_CP027599.1 Protein Homology exon 599170 599805 . + . gene_id "nbis-gene-540"; transcript_id "gene-C7A06_RS03165"; Dbxref "Genbank:WP_000476487.1"; ID "nbis-exon-554"; Name "WP_000476487.1"; Parent "gene-C7A06_RS03165"; gbkey "CDS"; gene "mlaC"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417659.1"; locus_tag "C7A06_RS03165"; product "phospholipid-binding protein MlaC"; protein_id "WP_000476487.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2691 NZ_CP027599.1 Protein Homology CDS 599170 599805 . + 0 gene_id "nbis-gene-540"; transcript_id "gene-C7A06_RS03165"; Dbxref "Genbank:WP_000476487.1"; ID "cds-WP_000476487.1"; Name "WP_000476487.1"; Parent "gene-C7A06_RS03165"; gbkey "CDS"; gene "mlaC"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417659.1"; locus_tag "C7A06_RS03165"; product "phospholipid-binding protein MlaC"; protein_id "WP_000476487.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2692 NZ_CP027599.1 RefSeq gene 599805 600098 . + . gene_id "nbis-gene-541"; ID "nbis-gene-541"; Name "mlaB"; gbkey "Gene"; gene "mlaB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03170";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2693 NZ_CP027599.1 RefSeq transcript 599805 600098 . + . gene_id "nbis-gene-541"; transcript_id "gene-C7A06_RS03170"; ID "gene-C7A06_RS03170"; Name "mlaB"; Parent "nbis-gene-541"; gbkey "Gene"; gene "mlaB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03170"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2694 NZ_CP027599.1 Protein Homology exon 599805 600098 . + . gene_id "nbis-gene-541"; transcript_id "gene-C7A06_RS03170"; Dbxref "Genbank:WP_000004488.1"; ID "nbis-exon-555"; Name "WP_000004488.1"; Parent "gene-C7A06_RS03170"; gbkey "CDS"; gene "mlaB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312097.2"; locus_tag "C7A06_RS03170"; product "lipid asymmetry maintenance protein MlaB"; protein_id "WP_000004488.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2695 NZ_CP027599.1 Protein Homology CDS 599805 600098 . + 0 gene_id "nbis-gene-541"; transcript_id "gene-C7A06_RS03170"; Dbxref "Genbank:WP_000004488.1"; ID "cds-WP_000004488.1"; Name "WP_000004488.1"; Parent "gene-C7A06_RS03170"; gbkey "CDS"; gene "mlaB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312097.2"; locus_tag "C7A06_RS03170"; product "lipid asymmetry maintenance protein MlaB"; protein_id "WP_000004488.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2696 NZ_CP027599.1 RefSeq gene 600258 600512 . + . gene_id "nbis-gene-542"; ID "nbis-gene-542"; Name "ibaG"; gbkey "Gene"; gene "ibaG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03175";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2697 NZ_CP027599.1 RefSeq transcript 600258 600512 . + . gene_id "nbis-gene-542"; transcript_id "gene-C7A06_RS03175"; ID "gene-C7A06_RS03175"; Name "ibaG"; Parent "nbis-gene-542"; gbkey "Gene"; gene "ibaG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03175"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2698 NZ_CP027599.1 Protein Homology exon 600258 600512 . + . gene_id "nbis-gene-542"; transcript_id "gene-C7A06_RS03175"; Dbxref "Genbank:WP_000429656.1"; ID "nbis-exon-556"; Name "WP_000429656.1"; Parent "gene-C7A06_RS03175"; gbkey "CDS"; gene "ibaG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417657.2"; locus_tag "C7A06_RS03175"; product "BolA family iron metabolism protein IbaG"; protein_id "WP_000429656.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2699 NZ_CP027599.1 Protein Homology CDS 600258 600512 . + 0 gene_id "nbis-gene-542"; transcript_id "gene-C7A06_RS03175"; Dbxref "Genbank:WP_000429656.1"; ID "cds-WP_000429656.1"; Name "WP_000429656.1"; Parent "gene-C7A06_RS03175"; gbkey "CDS"; gene "ibaG"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417657.2"; locus_tag "C7A06_RS03175"; product "BolA family iron metabolism protein IbaG"; protein_id "WP_000429656.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2700 NZ_CP027599.1 RefSeq gene 600567 601826 . + . gene_id "nbis-gene-543"; ID "nbis-gene-543"; Name "murA"; gbkey "Gene"; gene "murA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03180";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2701 NZ_CP027599.1 RefSeq transcript 600567 601826 . + . gene_id "nbis-gene-543"; transcript_id "gene-C7A06_RS03180"; ID "gene-C7A06_RS03180"; Name "murA"; Parent "nbis-gene-543"; gbkey "Gene"; gene "murA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03180"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2702 NZ_CP027599.1 Protein Homology exon 600567 601826 . + . gene_id "nbis-gene-543"; transcript_id "gene-C7A06_RS03180"; Dbxref "Genbank:WP_000357259.1"; ID "nbis-exon-557"; Name "WP_000357259.1"; Ontology_term "GO:0009252" "GO:0008760"; Parent "gene-C7A06_RS03180"; gbkey "CDS"; gene "murA"; go_function "UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA"; go_process "peptidoglycan biosynthetic process|0009252||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417656.1"; locus_tag "C7A06_RS03180"; product "UDP-N-acetylglucosamine 1-carboxyvinyltransferase"; protein_id "WP_000357259.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2703 NZ_CP027599.1 Protein Homology CDS 600567 601826 . + 0 gene_id "nbis-gene-543"; transcript_id "gene-C7A06_RS03180"; Dbxref "Genbank:WP_000357259.1"; ID "cds-WP_000357259.1"; Name "WP_000357259.1"; Ontology_term "GO:0009252" "GO:0008760"; Parent "gene-C7A06_RS03180"; gbkey "CDS"; gene "murA"; go_function "UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA"; go_process "peptidoglycan biosynthetic process|0009252||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417656.1"; locus_tag "C7A06_RS03180"; product "UDP-N-acetylglucosamine 1-carboxyvinyltransferase"; protein_id "WP_000357259.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2704 NZ_CP027599.1 RefSeq gene 601874 602152 . - . gene_id "nbis-gene-544"; ID "nbis-gene-544"; Name "sfsB"; gbkey "Gene"; gene "sfsB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03185";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2705 NZ_CP027599.1 RefSeq transcript 601874 602152 . - . gene_id "nbis-gene-544"; transcript_id "gene-C7A06_RS03185"; ID "gene-C7A06_RS03185"; Name "sfsB"; Parent "nbis-gene-544"; gbkey "Gene"; gene "sfsB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03185"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2706 NZ_CP027599.1 Protein Homology exon 601874 602152 . - . gene_id "nbis-gene-544"; transcript_id "gene-C7A06_RS03185"; Dbxref "Genbank:WP_000445413.1"; ID "nbis-exon-558"; Name "WP_000445413.1"; Parent "gene-C7A06_RS03185"; gbkey "CDS"; gene "sfsB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417655.1"; locus_tag "C7A06_RS03185"; product "DNA-binding transcriptional regulator SfsB"; protein_id "WP_000445413.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2707 NZ_CP027599.1 Protein Homology CDS 601874 602152 . - 0 gene_id "nbis-gene-544"; transcript_id "gene-C7A06_RS03185"; Dbxref "Genbank:WP_000445413.1"; ID "cds-WP_000445413.1"; Name "WP_000445413.1"; Parent "gene-C7A06_RS03185"; gbkey "CDS"; gene "sfsB"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417655.1"; locus_tag "C7A06_RS03185"; product "DNA-binding transcriptional regulator SfsB"; protein_id "WP_000445413.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2708 NZ_CP027599.1 RefSeq gene 602379 603350 . - . gene_id "nbis-gene-545"; ID "nbis-gene-545"; Name "ispB"; gbkey "Gene"; gene "ispB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03190";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2709 NZ_CP027599.1 RefSeq transcript 602379 603350 . - . gene_id "nbis-gene-545"; transcript_id "gene-C7A06_RS03190"; ID "gene-C7A06_RS03190"; Name "ispB"; Parent "nbis-gene-545"; gbkey "Gene"; gene "ispB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03190"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2710 NZ_CP027599.1 Protein Homology exon 602379 603350 . - . gene_id "nbis-gene-545"; transcript_id "gene-C7A06_RS03190"; Dbxref "Genbank:WP_001047336.1"; ID "nbis-exon-559"; Name "WP_001047336.1"; Ontology_term "GO:0008299"; Parent "gene-C7A06_RS03190"; gbkey "CDS"; gene "ispB"; go_process "isoprenoid biosynthetic process|0008299||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417654.1"; locus_tag "C7A06_RS03190"; product "octaprenyl diphosphate synthase"; protein_id "WP_001047336.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2711 NZ_CP027599.1 Protein Homology CDS 602379 603350 . - 0 gene_id "nbis-gene-545"; transcript_id "gene-C7A06_RS03190"; Dbxref "Genbank:WP_001047336.1"; ID "cds-WP_001047336.1"; Name "WP_001047336.1"; Ontology_term "GO:0008299"; Parent "gene-C7A06_RS03190"; gbkey "CDS"; gene "ispB"; go_process "isoprenoid biosynthetic process|0008299||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417654.1"; locus_tag "C7A06_RS03190"; product "octaprenyl diphosphate synthase"; protein_id "WP_001047336.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2712 NZ_CP027599.1 RefSeq gene 603609 603920 . + . gene_id "nbis-gene-546"; ID "nbis-gene-546"; Name "rplU"; gbkey "Gene"; gene "rplU"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03195";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2713 NZ_CP027599.1 RefSeq transcript 603609 603920 . + . gene_id "nbis-gene-546"; transcript_id "gene-C7A06_RS03195"; ID "gene-C7A06_RS03195"; Name "rplU"; Parent "nbis-gene-546"; gbkey "Gene"; gene "rplU"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03195"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2714 NZ_CP027599.1 Protein Homology exon 603609 603920 . + . gene_id "nbis-gene-546"; transcript_id "gene-C7A06_RS03195"; Dbxref "Genbank:WP_000271401.1"; ID "nbis-exon-560"; Name "WP_000271401.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000311" "GO:0022625"; Parent "gene-C7A06_RS03195"; gbkey "CDS"; gene "rplU"; go_component "plastid large ribosomal subunit|0000311||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1"; locus_tag "C7A06_RS03195"; product "50S ribosomal protein L21"; protein_id "WP_000271401.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2715 NZ_CP027599.1 Protein Homology CDS 603609 603920 . + 0 gene_id "nbis-gene-546"; transcript_id "gene-C7A06_RS03195"; Dbxref "Genbank:WP_000271401.1"; ID "cds-WP_000271401.1"; Name "WP_000271401.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000311" "GO:0022625"; Parent "gene-C7A06_RS03195"; gbkey "CDS"; gene "rplU"; go_component "plastid large ribosomal subunit|0000311||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1"; locus_tag "C7A06_RS03195"; product "50S ribosomal protein L21"; protein_id "WP_000271401.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2716 NZ_CP027599.1 RefSeq gene 603941 604198 . + . gene_id "nbis-gene-547"; ID "nbis-gene-547"; Name "rpmA"; gbkey "Gene"; gene "rpmA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03200";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2717 NZ_CP027599.1 RefSeq transcript 603941 604198 . + . gene_id "nbis-gene-547"; transcript_id "gene-C7A06_RS03200"; ID "gene-C7A06_RS03200"; Name "rpmA"; Parent "nbis-gene-547"; gbkey "Gene"; gene "rpmA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03200"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2718 NZ_CP027599.1 Protein Homology exon 603941 604198 . + . gene_id "nbis-gene-547"; transcript_id "gene-C7A06_RS03200"; Dbxref "Genbank:WP_000940595.1"; ID "nbis-exon-561"; Name "WP_000940595.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS03200"; gbkey "CDS"; gene "rpmA"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1"; locus_tag "C7A06_RS03200"; product "50S ribosomal protein L27"; protein_id "WP_000940595.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2719 NZ_CP027599.1 Protein Homology CDS 603941 604198 . + 0 gene_id "nbis-gene-547"; transcript_id "gene-C7A06_RS03200"; Dbxref "Genbank:WP_000940595.1"; ID "cds-WP_000940595.1"; Name "WP_000940595.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000315" "GO:0022625"; Parent "gene-C7A06_RS03200"; gbkey "CDS"; gene "rpmA"; go_component "organellar large ribosomal subunit|0000315||IEA" "cytosolic large ribosomal subunit|0022625||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1"; locus_tag "C7A06_RS03200"; product "50S ribosomal protein L27"; protein_id "WP_000940595.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2720 NZ_CP027599.1 RefSeq gene 604325 605290 . + . gene_id "nbis-gene-548"; ID "nbis-gene-548"; Name "yhbE"; gbkey "Gene"; gene "yhbE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03205";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2721 NZ_CP027599.1 RefSeq transcript 604325 605290 . + . gene_id "nbis-gene-548"; transcript_id "gene-C7A06_RS03205"; ID "gene-C7A06_RS03205"; Name "yhbE"; Parent "nbis-gene-548"; gbkey "Gene"; gene "yhbE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03205"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2722 NZ_CP027599.1 Protein Homology exon 604325 605290 . + . gene_id "nbis-gene-548"; transcript_id "gene-C7A06_RS03205"; Dbxref "Genbank:WP_000813030.1"; ID "nbis-exon-562"; Name "WP_000813030.1"; Parent "gene-C7A06_RS03205"; gbkey "CDS"; gene "yhbE"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1"; locus_tag "C7A06_RS03205"; product "DMT family transporter"; protein_id "WP_000813030.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2723 NZ_CP027599.1 Protein Homology CDS 604325 605290 . + 0 gene_id "nbis-gene-548"; transcript_id "gene-C7A06_RS03205"; Dbxref "Genbank:WP_000813030.1"; ID "cds-WP_000813030.1"; Name "WP_000813030.1"; Parent "gene-C7A06_RS03205"; gbkey "CDS"; gene "yhbE"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1"; locus_tag "C7A06_RS03205"; product "DMT family transporter"; protein_id "WP_000813030.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2724 NZ_CP027599.1 RefSeq gene 605306 606478 . + . gene_id "nbis-gene-549"; ID "nbis-gene-549"; Name "cgtA"; gbkey "Gene"; gene "cgtA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03210";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2725 NZ_CP027599.1 RefSeq transcript 605306 606478 . + . gene_id "nbis-gene-549"; transcript_id "gene-C7A06_RS03210"; ID "gene-C7A06_RS03210"; Name "cgtA"; Parent "nbis-gene-549"; gbkey "Gene"; gene "cgtA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03210"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2726 NZ_CP027599.1 Protein Homology exon 605306 606478 . + . gene_id "nbis-gene-549"; transcript_id "gene-C7A06_RS03210"; Dbxref "Genbank:WP_000673549.1"; ID "nbis-exon-563"; Name "WP_000673549.1"; Ontology_term "GO:0042254" "GO:0005525"; Parent "gene-C7A06_RS03210"; gbkey "CDS"; gene "cgtA"; go_function "GTP binding|0005525||IEA"; go_process "ribosome biogenesis|0042254||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_708982.1"; locus_tag "C7A06_RS03210"; product "Obg family GTPase CgtA"; protein_id "WP_000673549.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2727 NZ_CP027599.1 Protein Homology CDS 605306 606478 . + 0 gene_id "nbis-gene-549"; transcript_id "gene-C7A06_RS03210"; Dbxref "Genbank:WP_000673549.1"; ID "cds-WP_000673549.1"; Name "WP_000673549.1"; Ontology_term "GO:0042254" "GO:0005525"; Parent "gene-C7A06_RS03210"; gbkey "CDS"; gene "cgtA"; go_function "GTP binding|0005525||IEA"; go_process "ribosome biogenesis|0042254||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_708982.1"; locus_tag "C7A06_RS03210"; product "Obg family GTPase CgtA"; protein_id "WP_000673549.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2728 NZ_CP027599.1 RefSeq gene 606518 607951 . - . gene_id "nbis-gene-550"; ID "nbis-gene-550"; Name "dacB"; gbkey "Gene"; gene "dacB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03215";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2729 NZ_CP027599.1 RefSeq transcript 606518 607951 . - . gene_id "nbis-gene-550"; transcript_id "gene-C7A06_RS03215"; ID "gene-C7A06_RS03215"; Name "dacB"; Parent "nbis-gene-550"; gbkey "Gene"; gene "dacB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03215"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2730 NZ_CP027599.1 Protein Homology exon 606518 607951 . - . gene_id "nbis-gene-550"; transcript_id "gene-C7A06_RS03215"; Dbxref "Genbank:WP_001212655.1"; ID "nbis-exon-564"; Name "WP_001212655.1"; Ontology_term "GO:0006508" "GO:0004185"; Parent "gene-C7A06_RS03215"; gbkey "CDS"; gene "dacB"; go_function "serine-type carboxypeptidase activity|0004185||IEA"; go_process "proteolysis|0006508||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001212660.1"; locus_tag "C7A06_RS03215"; product "serine-type D-Ala-D-Ala carboxypeptidase"; protein_id "WP_001212655.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2731 NZ_CP027599.1 Protein Homology CDS 606518 607951 . - 0 gene_id "nbis-gene-550"; transcript_id "gene-C7A06_RS03215"; Dbxref "Genbank:WP_001212655.1"; ID "cds-WP_001212655.1"; Name "WP_001212655.1"; Ontology_term "GO:0006508" "GO:0004185"; Parent "gene-C7A06_RS03215"; gbkey "CDS"; gene "dacB"; go_function "serine-type carboxypeptidase activity|0004185||IEA"; go_process "proteolysis|0006508||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001212660.1"; locus_tag "C7A06_RS03215"; product "serine-type D-Ala-D-Ala carboxypeptidase"; protein_id "WP_001212655.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2732 NZ_CP027599.1 RefSeq gene 608199 608675 . + . gene_id "nbis-gene-551"; ID "nbis-gene-551"; Name "greA"; gbkey "Gene"; gene "greA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03220";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2733 NZ_CP027599.1 RefSeq transcript 608199 608675 . + . gene_id "nbis-gene-551"; transcript_id "gene-C7A06_RS03220"; ID "gene-C7A06_RS03220"; Name "greA"; Parent "nbis-gene-551"; gbkey "Gene"; gene "greA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03220"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2734 NZ_CP027599.1 Protein Homology exon 608199 608675 . + . gene_id "nbis-gene-551"; transcript_id "gene-C7A06_RS03220"; Dbxref "Genbank:WP_001148001.1"; ID "nbis-exon-565"; Name "WP_001148001.1"; Ontology_term "GO:0032784" "GO:0003677" "GO:0070063"; Parent "gene-C7A06_RS03220"; gbkey "CDS"; gene "greA"; go_function "DNA binding|0003677||IEA" "RNA polymerase binding|0070063||IEA"; go_process "regulation of DNA-templated transcription, elongation|0032784||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1"; locus_tag "C7A06_RS03220"; product "transcription elongation factor GreA"; protein_id "WP_001148001.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2735 NZ_CP027599.1 Protein Homology CDS 608199 608675 . + 0 gene_id "nbis-gene-551"; transcript_id "gene-C7A06_RS03220"; Dbxref "Genbank:WP_001148001.1"; ID "cds-WP_001148001.1"; Name "WP_001148001.1"; Ontology_term "GO:0032784" "GO:0003677" "GO:0070063"; Parent "gene-C7A06_RS03220"; gbkey "CDS"; gene "greA"; go_function "DNA binding|0003677||IEA" "RNA polymerase binding|0070063||IEA"; go_process "regulation of DNA-templated transcription, elongation|0032784||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1"; locus_tag "C7A06_RS03220"; product "transcription elongation factor GreA"; protein_id "WP_001148001.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2736 NZ_CP027599.1 RefSeq gene 608831 609124 . - . gene_id "nbis-gene-552"; ID "nbis-gene-552"; Name "yhbY"; gbkey "Gene"; gene "yhbY"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03225";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2737 NZ_CP027599.1 RefSeq transcript 608831 609124 . - . gene_id "nbis-gene-552"; transcript_id "gene-C7A06_RS03225"; ID "gene-C7A06_RS03225"; Name "yhbY"; Parent "nbis-gene-552"; gbkey "Gene"; gene "yhbY"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03225"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2738 NZ_CP027599.1 Protein Homology exon 608831 609124 . - . gene_id "nbis-gene-552"; transcript_id "gene-C7A06_RS03225"; Dbxref "Genbank:WP_001054420.1"; ID "nbis-exon-566"; Name "WP_001054420.1"; Parent "gene-C7A06_RS03225"; gbkey "CDS"; gene "yhbY"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1"; locus_tag "C7A06_RS03225"; product "ribosome assembly RNA-binding protein YhbY"; protein_id "WP_001054420.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2739 NZ_CP027599.1 Protein Homology CDS 608831 609124 . - 0 gene_id "nbis-gene-552"; transcript_id "gene-C7A06_RS03225"; Dbxref "Genbank:WP_001054420.1"; ID "cds-WP_001054420.1"; Name "WP_001054420.1"; Parent "gene-C7A06_RS03225"; gbkey "CDS"; gene "yhbY"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1"; locus_tag "C7A06_RS03225"; product "ribosome assembly RNA-binding protein YhbY"; protein_id "WP_001054420.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2740 NZ_CP027599.1 RefSeq gene 609250 609879 . + . gene_id "nbis-gene-553"; ID "nbis-gene-553"; Name "rlmE"; gbkey "Gene"; gene "rlmE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03230";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2741 NZ_CP027599.1 RefSeq transcript 609250 609879 . + . gene_id "nbis-gene-553"; transcript_id "gene-C7A06_RS03230"; ID "gene-C7A06_RS03230"; Name "rlmE"; Parent "nbis-gene-553"; gbkey "Gene"; gene "rlmE"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03230"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2742 NZ_CP027599.1 Protein Homology exon 609250 609879 . + . gene_id "nbis-gene-553"; transcript_id "gene-C7A06_RS03230"; Dbxref "Genbank:WP_000145975.1"; ID "nbis-exon-567"; Name "WP_000145975.1"; Ontology_term "GO:0001510" "GO:0006364" "GO:0016436"; Parent "gene-C7A06_RS03230"; gbkey "CDS"; gene "rlmE"; go_function "rRNA (uridine) methyltransferase activity|0016436||IEA"; go_process "RNA methylation|0001510||IEA" "rRNA processing|0006364||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312085.1"; locus_tag "C7A06_RS03230"; product "23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE"; protein_id "WP_000145975.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2743 NZ_CP027599.1 Protein Homology CDS 609250 609879 . + 0 gene_id "nbis-gene-553"; transcript_id "gene-C7A06_RS03230"; Dbxref "Genbank:WP_000145975.1"; ID "cds-WP_000145975.1"; Name "WP_000145975.1"; Ontology_term "GO:0001510" "GO:0006364" "GO:0016436"; Parent "gene-C7A06_RS03230"; gbkey "CDS"; gene "rlmE"; go_function "rRNA (uridine) methyltransferase activity|0016436||IEA"; go_process "RNA methylation|0001510||IEA" "rRNA processing|0006364||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312085.1"; locus_tag "C7A06_RS03230"; product "23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE"; protein_id "WP_000145975.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2744 NZ_CP027599.1 RefSeq gene 609979 611913 . + . gene_id "nbis-gene-554"; ID "nbis-gene-554"; Name "ftsH"; gbkey "Gene"; gene "ftsH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03235";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2745 NZ_CP027599.1 RefSeq transcript 609979 611913 . + . gene_id "nbis-gene-554"; transcript_id "gene-C7A06_RS03235"; ID "gene-C7A06_RS03235"; Name "ftsH"; Parent "nbis-gene-554"; gbkey "Gene"; gene "ftsH"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03235"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2746 NZ_CP027599.1 Protein Homology exon 609979 611913 . + . gene_id "nbis-gene-554"; transcript_id "gene-C7A06_RS03235"; Dbxref "Genbank:WP_001107467.1"; ID "nbis-exon-568"; Name "WP_001107467.1"; Ontology_term "GO:0006508" "GO:0004176" "GO:0004222"; Parent "gene-C7A06_RS03235"; gbkey "CDS"; gene "ftsH"; go_function "ATP-dependent peptidase activity|0004176||IEA" "metalloendopeptidase activity|0004222||IEA"; go_process "proteolysis|0006508||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1"; locus_tag "C7A06_RS03235"; product "ATP-dependent zinc metalloprotease FtsH"; protein_id "WP_001107467.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2747 NZ_CP027599.1 Protein Homology CDS 609979 611913 . + 0 gene_id "nbis-gene-554"; transcript_id "gene-C7A06_RS03235"; Dbxref "Genbank:WP_001107467.1"; ID "cds-WP_001107467.1"; Name "WP_001107467.1"; Ontology_term "GO:0006508" "GO:0004176" "GO:0004222"; Parent "gene-C7A06_RS03235"; gbkey "CDS"; gene "ftsH"; go_function "ATP-dependent peptidase activity|0004176||IEA" "metalloendopeptidase activity|0004222||IEA"; go_process "proteolysis|0006508||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1"; locus_tag "C7A06_RS03235"; product "ATP-dependent zinc metalloprotease FtsH"; protein_id "WP_001107467.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2748 NZ_CP027599.1 RefSeq gene 612003 612851 . + . gene_id "nbis-gene-555"; ID "nbis-gene-555"; Name "folP"; gbkey "Gene"; gene "folP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03240";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2749 NZ_CP027599.1 RefSeq transcript 612003 612851 . + . gene_id "nbis-gene-555"; transcript_id "gene-C7A06_RS03240"; ID "gene-C7A06_RS03240"; Name "folP"; Parent "nbis-gene-555"; gbkey "Gene"; gene "folP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03240"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2750 NZ_CP027599.1 Protein Homology exon 612003 612851 . + . gene_id "nbis-gene-555"; transcript_id "gene-C7A06_RS03240"; Dbxref "Genbank:WP_000764731.1"; ID "nbis-exon-569"; Name "WP_000764731.1"; Ontology_term "GO:0004156"; Parent "gene-C7A06_RS03240"; gbkey "CDS"; gene "folP"; go_function "dihydropteroate synthase activity|0004156||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312083.2"; locus_tag "C7A06_RS03240"; product "dihydropteroate synthase"; protein_id "WP_000764731.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2751 NZ_CP027599.1 Protein Homology CDS 612003 612851 . + 0 gene_id "nbis-gene-555"; transcript_id "gene-C7A06_RS03240"; Dbxref "Genbank:WP_000764731.1"; ID "cds-WP_000764731.1"; Name "WP_000764731.1"; Ontology_term "GO:0004156"; Parent "gene-C7A06_RS03240"; gbkey "CDS"; gene "folP"; go_function "dihydropteroate synthase activity|0004156||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312083.2"; locus_tag "C7A06_RS03240"; product "dihydropteroate synthase"; protein_id "WP_000764731.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2752 NZ_CP027599.1 RefSeq gene 612844 614181 . + . gene_id "nbis-gene-556"; ID "nbis-gene-556"; Name "glmM"; gbkey "Gene"; gene "glmM"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03245";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2753 NZ_CP027599.1 RefSeq transcript 612844 614181 . + . gene_id "nbis-gene-556"; transcript_id "gene-C7A06_RS03245"; ID "gene-C7A06_RS03245"; Name "glmM"; Parent "nbis-gene-556"; gbkey "Gene"; gene "glmM"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03245"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2754 NZ_CP027599.1 Protein Homology exon 612844 614181 . + . gene_id "nbis-gene-556"; transcript_id "gene-C7A06_RS03245"; Dbxref "Genbank:WP_000071134.1"; ID "nbis-exon-570"; Name "WP_000071134.1"; Ontology_term "GO:0005975" "GO:0000287" "GO:0008966" "GO:0016868"; Parent "gene-C7A06_RS03245"; gbkey "CDS"; gene "glmM"; go_function "magnesium ion binding|0000287||IEA" "phosphoglucosamine mutase activity|0008966||IEA" "intramolecular transferase activity, phosphotransferases|0016868||IEA"; go_process "carbohydrate metabolic process|0005975||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417643.1"; locus_tag "C7A06_RS03245"; product "phosphoglucosamine mutase"; protein_id "WP_000071134.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2755 NZ_CP027599.1 Protein Homology CDS 612844 614181 . + 0 gene_id "nbis-gene-556"; transcript_id "gene-C7A06_RS03245"; Dbxref "Genbank:WP_000071134.1"; ID "cds-WP_000071134.1"; Name "WP_000071134.1"; Ontology_term "GO:0005975" "GO:0000287" "GO:0008966" "GO:0016868"; Parent "gene-C7A06_RS03245"; gbkey "CDS"; gene "glmM"; go_function "magnesium ion binding|0000287||IEA" "phosphoglucosamine mutase activity|0008966||IEA" "intramolecular transferase activity, phosphotransferases|0016868||IEA"; go_process "carbohydrate metabolic process|0005975||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417643.1"; locus_tag "C7A06_RS03245"; product "phosphoglucosamine mutase"; protein_id "WP_000071134.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2756 NZ_CP027599.1 RefSeq gene 614409 614741 . + . gene_id "nbis-gene-557"; ID "nbis-gene-557"; Name "secG"; gbkey "Gene"; gene "secG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03250";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2757 NZ_CP027599.1 RefSeq transcript 614409 614741 . + . gene_id "nbis-gene-557"; transcript_id "gene-C7A06_RS03250"; ID "gene-C7A06_RS03250"; Name "secG"; Parent "nbis-gene-557"; gbkey "Gene"; gene "secG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03250"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2758 NZ_CP027599.1 Protein Homology exon 614409 614741 . + . gene_id "nbis-gene-557"; transcript_id "gene-C7A06_RS03250"; Dbxref "Genbank:WP_001297427.1"; ID "nbis-exon-571"; Name "WP_001297427.1"; Ontology_term "GO:0043952" "GO:0015450" "GO:0005887"; Parent "gene-C7A06_RS03250"; gbkey "CDS"; gene "secG"; go_component "integral component of plasma membrane|0005887||IEA"; go_function "protein-transporting ATPase activity|0015450||IEA"; go_process "protein transport by the Sec complex|0043952||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312081.1"; locus_tag "C7A06_RS03250"; product "preprotein translocase subunit SecG"; protein_id "WP_001297427.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2759 NZ_CP027599.1 Protein Homology CDS 614409 614741 . + 0 gene_id "nbis-gene-557"; transcript_id "gene-C7A06_RS03250"; Dbxref "Genbank:WP_001297427.1"; ID "cds-WP_001297427.1"; Name "WP_001297427.1"; Ontology_term "GO:0043952" "GO:0015450" "GO:0005887"; Parent "gene-C7A06_RS03250"; gbkey "CDS"; gene "secG"; go_component "integral component of plasma membrane|0005887||IEA"; go_function "protein-transporting ATPase activity|0015450||IEA"; go_process "protein transport by the Sec complex|0043952||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312081.1"; locus_tag "C7A06_RS03250"; product "preprotein translocase subunit SecG"; protein_id "WP_001297427.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2760 NZ_CP027599.1 RefSeq gene 614756 614842 . + . gene_id "gene-C7A06_RS03255"; ID "gene-C7A06_RS03255"; Name "C7A06_RS03255"; gbkey "Gene"; gene_biotype "tRNA"; locus_tag "C7A06_RS03255";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2761 NZ_CP027599.1 tRNAscan-SE transcript 614756 614842 . + . gene_id "gene-C7A06_RS03255"; transcript_id "rna-C7A06_RS03255"; ID "rna-C7A06_RS03255"; Parent "gene-C7A06_RS03255"; anticodon "(pos:614790..614792)"; gbkey "tRNA"; inference "COORDINATES: profile:tRNAscan-SE:2.0.7"; locus_tag "C7A06_RS03255"; original_biotype "trna"; product "tRNA-Leu";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2762 NZ_CP027599.1 tRNAscan-SE exon 614756 614842 . + . gene_id "gene-C7A06_RS03255"; transcript_id "rna-C7A06_RS03255"; ID "exon-C7A06_RS03255-1"; Parent "rna-C7A06_RS03255"; anticodon "(pos:614790..614792)"; gbkey "tRNA"; inference "COORDINATES: profile:tRNAscan-SE:2.0.7"; locus_tag "C7A06_RS03255"; product "tRNA-Leu";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2763 NZ_CP027599.1 RefSeq gene 615301 616926 . + . gene_id "nbis-gene-558"; ID "nbis-gene-558"; Name "yhbX"; gbkey "Gene"; gene "yhbX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03260";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2764 NZ_CP027599.1 RefSeq transcript 615301 616926 . + . gene_id "nbis-gene-558"; transcript_id "gene-C7A06_RS03260"; ID "gene-C7A06_RS03260"; Name "yhbX"; Parent "nbis-gene-558"; gbkey "Gene"; gene "yhbX"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03260"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2765 NZ_CP027599.1 Protein Homology exon 615301 616926 . + . gene_id "nbis-gene-558"; transcript_id "gene-C7A06_RS03260"; Dbxref "Genbank:WP_001300540.1"; ID "nbis-exon-572"; Name "WP_001300540.1"; Parent "gene-C7A06_RS03260"; gbkey "CDS"; gene "yhbX"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417641.4"; locus_tag "C7A06_RS03260"; product "phosphoethanolamine transferase"; protein_id "WP_001300540.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2766 NZ_CP027599.1 Protein Homology CDS 615301 616926 . + 0 gene_id "nbis-gene-558"; transcript_id "gene-C7A06_RS03260"; Dbxref "Genbank:WP_001300540.1"; ID "cds-WP_001300540.1"; Name "WP_001300540.1"; Parent "gene-C7A06_RS03260"; gbkey "CDS"; gene "yhbX"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_417641.4"; locus_tag "C7A06_RS03260"; product "phosphoethanolamine transferase"; protein_id "WP_001300540.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2767 NZ_CP027599.1 RefSeq gene 616934 618277 . - . gene_id "nbis-gene-559"; ID "nbis-gene-559"; Name "argG"; gbkey "Gene"; gene "argG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03265";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2768 NZ_CP027599.1 RefSeq transcript 616934 618277 . - . gene_id "nbis-gene-559"; transcript_id "gene-C7A06_RS03265"; ID "gene-C7A06_RS03265"; Name "argG"; Parent "nbis-gene-559"; gbkey "Gene"; gene "argG"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03265"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2769 NZ_CP027599.1 Protein Homology exon 616934 618277 . - . gene_id "nbis-gene-559"; transcript_id "gene-C7A06_RS03265"; Dbxref "Genbank:WP_000207685.1"; ID "nbis-exon-573"; Name "WP_000207685.1"; Ontology_term "GO:0006526" "GO:0004055" "GO:0005524" "GO:0042803"; Parent "gene-C7A06_RS03265"; gbkey "CDS"; gene "argG"; go_function "argininosuccinate synthase activity|0004055||IEA" "ATP binding|0005524||IEA" "protein homodimerization activity|0042803||IEA"; go_process "arginine biosynthetic process|0006526||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_708973.1"; locus_tag "C7A06_RS03265"; product "argininosuccinate synthase"; protein_id "WP_000207685.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2770 NZ_CP027599.1 Protein Homology CDS 616934 618277 . - 0 gene_id "nbis-gene-559"; transcript_id "gene-C7A06_RS03265"; Dbxref "Genbank:WP_000207685.1"; ID "cds-WP_000207685.1"; Name "WP_000207685.1"; Ontology_term "GO:0006526" "GO:0004055" "GO:0005524" "GO:0042803"; Parent "gene-C7A06_RS03265"; gbkey "CDS"; gene "argG"; go_function "argininosuccinate synthase activity|0004055||IEA" "ATP binding|0005524||IEA" "protein homodimerization activity|0042803||IEA"; go_process "arginine biosynthetic process|0006526||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_708973.1"; locus_tag "C7A06_RS03265"; product "argininosuccinate synthase"; protein_id "WP_000207685.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2771 NZ_CP027599.1 RefSeq gene 618625 618701 . + . gene_id "gene-C7A06_RS03270"; ID "gene-C7A06_RS03270"; Name "C7A06_RS03270"; gbkey "Gene"; gene_biotype "tRNA"; locus_tag "C7A06_RS03270";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2772 NZ_CP027599.1 tRNAscan-SE transcript 618625 618701 . + . gene_id "gene-C7A06_RS03270"; transcript_id "rna-C7A06_RS03270"; ID "rna-C7A06_RS03270"; Parent "gene-C7A06_RS03270"; anticodon "(pos:618659..618661)"; gbkey "tRNA"; inference "COORDINATES: profile:tRNAscan-SE:2.0.7"; locus_tag "C7A06_RS03270"; original_biotype "trna"; product "tRNA-Met";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2773 NZ_CP027599.1 tRNAscan-SE exon 618625 618701 . + . gene_id "gene-C7A06_RS03270"; transcript_id "rna-C7A06_RS03270"; ID "exon-C7A06_RS03270-1"; Parent "rna-C7A06_RS03270"; anticodon "(pos:618659..618661)"; gbkey "tRNA"; inference "COORDINATES: profile:tRNAscan-SE:2.0.7"; locus_tag "C7A06_RS03270"; product "tRNA-Met";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2774 NZ_CP027599.1 RefSeq gene 618908 619360 . + . gene_id "nbis-gene-560"; ID "nbis-gene-560"; Name "rimP"; gbkey "Gene"; gene "rimP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03275";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2775 NZ_CP027599.1 RefSeq transcript 618908 619360 . + . gene_id "nbis-gene-560"; transcript_id "gene-C7A06_RS03275"; ID "gene-C7A06_RS03275"; Name "rimP"; Parent "nbis-gene-560"; gbkey "Gene"; gene "rimP"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03275"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2776 NZ_CP027599.1 Protein Homology exon 618908 619360 . + . gene_id "nbis-gene-560"; transcript_id "gene-C7A06_RS03275"; Dbxref "Genbank:WP_001300397.1"; ID "nbis-exon-574"; Name "WP_001300397.1"; Ontology_term "GO:0042274"; Parent "gene-C7A06_RS03275"; gbkey "CDS"; gene "rimP"; go_process "ribosomal small subunit biogenesis|0042274||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1"; locus_tag "C7A06_RS03275"; product "ribosome maturation factor RimP"; protein_id "WP_001300397.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2777 NZ_CP027599.1 Protein Homology CDS 618908 619360 . + 0 gene_id "nbis-gene-560"; transcript_id "gene-C7A06_RS03275"; Dbxref "Genbank:WP_001300397.1"; ID "cds-WP_001300397.1"; Name "WP_001300397.1"; Ontology_term "GO:0042274"; Parent "gene-C7A06_RS03275"; gbkey "CDS"; gene "rimP"; go_process "ribosomal small subunit biogenesis|0042274||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1"; locus_tag "C7A06_RS03275"; product "ribosome maturation factor RimP"; protein_id "WP_001300397.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2778 NZ_CP027599.1 RefSeq gene 619388 620875 . + . gene_id "nbis-gene-561"; ID "nbis-gene-561"; Name "nusA"; gbkey "Gene"; gene "nusA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03280";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2779 NZ_CP027599.1 RefSeq transcript 619388 620875 . + . gene_id "nbis-gene-561"; transcript_id "gene-C7A06_RS03280"; ID "gene-C7A06_RS03280"; Name "nusA"; Parent "nbis-gene-561"; gbkey "Gene"; gene "nusA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03280"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2780 NZ_CP027599.1 Protein Homology exon 619388 620875 . + . gene_id "nbis-gene-561"; transcript_id "gene-C7A06_RS03280"; Dbxref "Genbank:WP_001031055.1"; ID "nbis-exon-575"; Name "WP_001031055.1"; Ontology_term "GO:0006353"; Parent "gene-C7A06_RS03280"; gbkey "CDS"; gene "nusA"; go_process "DNA-templated transcription, termination|0006353||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1"; locus_tag "C7A06_RS03280"; product "transcription termination factor NusA"; protein_id "WP_001031055.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2781 NZ_CP027599.1 Protein Homology CDS 619388 620875 . + 0 gene_id "nbis-gene-561"; transcript_id "gene-C7A06_RS03280"; Dbxref "Genbank:WP_001031055.1"; ID "cds-WP_001031055.1"; Name "WP_001031055.1"; Ontology_term "GO:0006353"; Parent "gene-C7A06_RS03280"; gbkey "CDS"; gene "nusA"; go_process "DNA-templated transcription, termination|0006353||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1"; locus_tag "C7A06_RS03280"; product "transcription termination factor NusA"; protein_id "WP_001031055.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2782 NZ_CP027599.1 RefSeq gene 620900 623572 . + . gene_id "nbis-gene-562"; ID "nbis-gene-562"; Name "infB"; gbkey "Gene"; gene "infB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03285";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2783 NZ_CP027599.1 RefSeq transcript 620900 623572 . + . gene_id "nbis-gene-562"; transcript_id "gene-C7A06_RS03285"; ID "gene-C7A06_RS03285"; Name "infB"; Parent "nbis-gene-562"; gbkey "Gene"; gene "infB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03285"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2784 NZ_CP027599.1 Protein Homology exon 620900 623572 . + . gene_id "nbis-gene-562"; transcript_id "gene-C7A06_RS03285"; Dbxref "Genbank:WP_000133044.1"; ID "nbis-exon-576"; Name "WP_000133044.1"; Ontology_term "GO:0006413" "GO:0003743" "GO:0005737"; Parent "gene-C7A06_RS03285"; gbkey "CDS"; gene "infB"; go_component "cytoplasm|0005737||IEA"; go_function "translation initiation factor activity|0003743||IEA"; go_process "translational initiation|0006413||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312076.1"; locus_tag "C7A06_RS03285"; product "translation initiation factor IF-2"; protein_id "WP_000133044.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2785 NZ_CP027599.1 Protein Homology CDS 620900 623572 . + 0 gene_id "nbis-gene-562"; transcript_id "gene-C7A06_RS03285"; Dbxref "Genbank:WP_000133044.1"; ID "cds-WP_000133044.1"; Name "WP_000133044.1"; Ontology_term "GO:0006413" "GO:0003743" "GO:0005737"; Parent "gene-C7A06_RS03285"; gbkey "CDS"; gene "infB"; go_component "cytoplasm|0005737||IEA"; go_function "translation initiation factor activity|0003743||IEA"; go_process "translational initiation|0006413||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312076.1"; locus_tag "C7A06_RS03285"; product "translation initiation factor IF-2"; protein_id "WP_000133044.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2786 NZ_CP027599.1 RefSeq gene 623736 624137 . + . gene_id "nbis-gene-563"; ID "nbis-gene-563"; Name "rbfA"; gbkey "Gene"; gene "rbfA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03290";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2787 NZ_CP027599.1 RefSeq transcript 623736 624137 . + . gene_id "nbis-gene-563"; transcript_id "gene-C7A06_RS03290"; ID "gene-C7A06_RS03290"; Name "rbfA"; Parent "nbis-gene-563"; gbkey "Gene"; gene "rbfA"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03290"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2788 NZ_CP027599.1 Protein Homology exon 623736 624137 . + . gene_id "nbis-gene-563"; transcript_id "gene-C7A06_RS03290"; Dbxref "Genbank:WP_001040205.1"; ID "nbis-exon-577"; Name "WP_001040205.1"; Ontology_term "GO:0006396" "GO:0019843"; Parent "gene-C7A06_RS03290"; gbkey "CDS"; gene "rbfA"; go_function "rRNA binding|0019843||IEA"; go_process "RNA processing|0006396||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1"; locus_tag "C7A06_RS03290"; product "30S ribosome-binding factor RbfA"; protein_id "WP_001040205.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2789 NZ_CP027599.1 Protein Homology CDS 623736 624137 . + 0 gene_id "nbis-gene-563"; transcript_id "gene-C7A06_RS03290"; Dbxref "Genbank:WP_001040205.1"; ID "cds-WP_001040205.1"; Name "WP_001040205.1"; Ontology_term "GO:0006396" "GO:0019843"; Parent "gene-C7A06_RS03290"; gbkey "CDS"; gene "rbfA"; go_function "rRNA binding|0019843||IEA"; go_process "RNA processing|0006396||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1"; locus_tag "C7A06_RS03290"; product "30S ribosome-binding factor RbfA"; protein_id "WP_001040205.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2790 NZ_CP027599.1 RefSeq gene 624137 625081 . + . gene_id "nbis-gene-564"; ID "nbis-gene-564"; Name "truB"; gbkey "Gene"; gene "truB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03295";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2791 NZ_CP027599.1 RefSeq transcript 624137 625081 . + . gene_id "nbis-gene-564"; transcript_id "gene-C7A06_RS03295"; ID "gene-C7A06_RS03295"; Name "truB"; Parent "nbis-gene-564"; gbkey "Gene"; gene "truB"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03295"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2792 NZ_CP027599.1 Protein Homology exon 624137 625081 . + . gene_id "nbis-gene-564"; transcript_id "gene-C7A06_RS03295"; Dbxref "Genbank:WP_000089719.1"; ID "nbis-exon-578"; Name "WP_000089719.1"; Ontology_term "GO:0006400" "GO:0004730"; Parent "gene-C7A06_RS03295"; gbkey "CDS"; gene "truB"; go_function "pseudouridylate synthase activity|0004730||IEA"; go_process "tRNA modification|0006400||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312074.1"; locus_tag "C7A06_RS03295"; product "tRNA pseudouridine(55) synthase TruB"; protein_id "WP_000089719.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2793 NZ_CP027599.1 Protein Homology CDS 624137 625081 . + 0 gene_id "nbis-gene-564"; transcript_id "gene-C7A06_RS03295"; Dbxref "Genbank:WP_000089719.1"; ID "cds-WP_000089719.1"; Name "WP_000089719.1"; Ontology_term "GO:0006400" "GO:0004730"; Parent "gene-C7A06_RS03295"; gbkey "CDS"; gene "truB"; go_function "pseudouridylate synthase activity|0004730||IEA"; go_process "tRNA modification|0006400||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312074.1"; locus_tag "C7A06_RS03295"; product "tRNA pseudouridine(55) synthase TruB"; protein_id "WP_000089719.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2794 NZ_CP027599.1 RefSeq gene 625230 625499 . + . gene_id "nbis-gene-565"; ID "nbis-gene-565"; Name "rpsO"; gbkey "Gene"; gene "rpsO"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03300";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2795 NZ_CP027599.1 RefSeq transcript 625230 625499 . + . gene_id "nbis-gene-565"; transcript_id "gene-C7A06_RS03300"; ID "gene-C7A06_RS03300"; Name "rpsO"; Parent "nbis-gene-565"; gbkey "Gene"; gene "rpsO"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03300"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2796 NZ_CP027599.1 Protein Homology exon 625230 625499 . + . gene_id "nbis-gene-565"; transcript_id "gene-C7A06_RS03300"; Dbxref "Genbank:WP_000059466.1"; ID "nbis-exon-579"; Name "WP_000059466.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000314" "GO:0022627"; Parent "gene-C7A06_RS03300"; gbkey "CDS"; gene "rpsO"; go_component "organellar small ribosomal subunit|0000314||IEA" "cytosolic small ribosomal subunit|0022627||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1"; locus_tag "C7A06_RS03300"; product "30S ribosomal protein S15"; protein_id "WP_000059466.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2797 NZ_CP027599.1 Protein Homology CDS 625230 625499 . + 0 gene_id "nbis-gene-565"; transcript_id "gene-C7A06_RS03300"; Dbxref "Genbank:WP_000059466.1"; ID "cds-WP_000059466.1"; Name "WP_000059466.1"; Ontology_term "GO:0006412" "GO:0003735" "GO:0000314" "GO:0022627"; Parent "gene-C7A06_RS03300"; gbkey "CDS"; gene "rpsO"; go_component "organellar small ribosomal subunit|0000314||IEA" "cytosolic small ribosomal subunit|0022627||IEA"; go_function "structural constituent of ribosome|0003735||IEA"; go_process "translation|0006412||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1"; locus_tag "C7A06_RS03300"; product "30S ribosomal protein S15"; protein_id "WP_000059466.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2798 NZ_CP027599.1 RefSeq gene 625746 627881 . + . gene_id "nbis-gene-566"; ID "nbis-gene-566"; Name "pnp"; gbkey "Gene"; gene "pnp"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03305";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2799 NZ_CP027599.1 RefSeq transcript 625746 627881 . + . gene_id "nbis-gene-566"; transcript_id "gene-C7A06_RS03305"; ID "gene-C7A06_RS03305"; Name "pnp"; Parent "nbis-gene-566"; gbkey "Gene"; gene "pnp"; gene_biotype "protein_coding"; locus_tag "C7A06_RS03305"; original_biotype "mrna";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2800 NZ_CP027599.1 Protein Homology exon 625746 627881 . + . gene_id "nbis-gene-566"; transcript_id "gene-C7A06_RS03305"; Dbxref "Genbank:WP_001297425.1"; ID "nbis-exon-580"; Name "WP_001297425.1"; Ontology_term "GO:0006402" "GO:0004654"; Parent "gene-C7A06_RS03305"; gbkey "CDS"; gene "pnp"; go_function "polyribonucleotide nucleotidyltransferase activity|0004654||IEA"; go_process "mRNA catabolic process|0006402||IEA"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_312072.2"; locus_tag "C7A06_RS03305"; product "polyribonucleotide nucleotidyltransferase"; protein_id "WP_001297425.1"; transl_table "11";
465d6578b4d0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
iuc
parents:
diff changeset
2801 NZ_CP027599.1 Protein Homology CDS 625746 627881 . + 0 gene_id "nbis-gene-566"; transcript_id "gene-C7A06_RS03305"; Dbxref "Genbank:WP_001297425.1"; ID "cds-WP_0