Mercurial > repos > iuc > circexplorer2

comparison test-data/test_08_annotated.txt @ 0:465d6578b4d0 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circexplorer2 commit fe03991cd7c43f5266314d1fb9e4108f1ab102e8
author iuc
date Fri, 26 Aug 2022 22:43:38 +0000
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comparison
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-1:000000000000 0:465d6578b4d0
1 chr21 35122447 35134290 circular_RNA/1 0 + ITSN1
2 chr21 45089764 45093836 circular_RNA/1 0 + RRP1B
3 chr21 32537278 32567621 circular_RNA/4 0 - TIAM1
4 chr21 35279644 35281515 circular_RNA/1 0 - ATP5PO
5 chr21 32617803 32624505 circular_RNA/1 0 - TIAM1
6 chr21 34906884 34911662 circular_RNA/1 0 - GART
7 chr21 27326903 27484463 circular_RNA/2 0 - APP
8 chr21 40762623 40763762 circular_RNA/1 0 + GET1
9 chr21 33750753 33756773 circular_RNA/1 0 - URB1
10 chr21 27264033 27347541 circular_RNA/1 0 - APP
11 chr21 35138178 35140132 circular_RNA/2 0 + ITSN1
12 chr21 34787194 34787327 circular_RNA/1 0 + IFNGR2
13 chr21 45494204 45495034 circular_RNA/1 0 + TRAPPC10
14 chr21 45475578 45483666 circular_RNA/1 0 + TRAPPC10
15 chr21 17135209 17172162 circular_RNA/2 0 + USP25
16 chr21 35127601 35140132 circular_RNA/1 0 + ITSN1
17 chr21 44270150 44279832 circular_RNA/2 0 - WDR4
18 chr21 37635843 37649398 circular_RNA/1 0 + DOP1B
19 chr21 32638325 32649224 circular_RNA/1 0 - TIAM1
20 chr21 34832719 34839429 circular_RNA/1 0 - TMEM50B
21 chr21 30693541 30702014 circular_RNA/1 0 + BACH1
22 chr21 33740711 33747792 circular_RNA/1 0 - URB1
23 chr21 35091101 35094956 circular_RNA/22 0 + ITSN1
24 chr21 47783394 47787054 circular_RNA/1 0 + PCNT
25 chr21 40590077 40590586 circular_RNA/1 0 - BRWD1
26 chr21 26961146 26973779 circular_RNA/1 0 - MRPL39
27 chr21 46893808 46902735 circular_RNA/1 0 + COL18A1
28 chr21 34721396 34721849 circular_RNA/1 0 + IFNAR1
29 chr21 45215069 45217576 circular_RNA/2 0 + RRP1
30 chr21 37705943 37711219 circular_RNA/1 0 + MORC3
31 chr21 44279771 44283706 circular_RNA/1 0 - WDR4
32 chr21 47904669 47917020 circular_RNA/1 0 + DIP2A
33 chr21 44272364 44296877 circular_RNA/5 0 - WDR4
34 chr21 17150222 17177577 circular_RNA/1 0 + USP25
35 chr21 39086513 39087434 circular_RNA/1 0 - KCNJ6
36 chr21 44293660 44296877 circular_RNA/1 0 - WDR4
37 chr21 34066537 34067592 circular_RNA/2 0 - SYNJ1
38 chr21 46281077 46285362 circular_RNA/1 0 - PTTG1IP
39 chr21 40619626 40622815 circular_RNA/3 0 - BRWD1
40 chr21 45451971 45457808 circular_RNA/1 0 + TRAPPC10
41 chr21 35134226 35138316 circular_RNA/1 0 + ITSN1
42 chr21 37429406 37429775 circular_RNA/1 0 - SETD4
43 chr21 40641824 40646398 circular_RNA/4 0 - BRWD1
44 chr21 32711557 32711737 circular_RNA/1 0 - TIAM1
45 chr21 38516824 38519903 circular_RNA/1 0 + TTC3
46 chr21 47320504 47321027 circular_RNA/1 0 + PCBP3
47 chr21 27347382 27372497 circular_RNA/2 0 - APP
48 chr21 38792600 38845182 circular_RNA/8 0 + DYRK1A
49 chr21 37619814 37620866 circular_RNA/3 0 + DOP1B
50 chr21 27326903 27354790 circular_RNA/2 0 - APP
51 chr21 40636385 40636945 circular_RNA/1 0 - BRWD1
52 chr21 30437288 30442658 circular_RNA/1 0 - CCT8
53 chr21 45537700 45537844 circular_RNA/1 0 + LOC102724159
54 chr21 47768925 47769734 circular_RNA/1 0 + PCNT
55 chr21 32554737 32567621 circular_RNA/1 0 - TIAM1
56 chr21 47746290 47754682 circular_RNA/1 0 + PCNT
57 chr21 32833536 32836348 circular_RNA/1 0 - TIAM1
58 chr21 37775055 37783902 circular_RNA/10 0 + CHAF1B
59 chr21 34713304 34717666 circular_RNA/1 0 + IFNAR1
60 chr21 27326903 27328069 circular_RNA/4 0 - APP
61 chr21 27277335 27284274 circular_RNA/2 0 - APP
62 chr21 37734480 37736557 circular_RNA/2 0 + MORC3
63 chr21 44482420 44493451 circular_RNA/1 0 - CBSL
64 chr21 48063446 48064400 circular_RNA/1 0 + PRMT2
65 chr21 47754310 47754682 circular_RNA/3 0 + PCNT
66 chr21 30677524 30702014 circular_RNA/1 0 + BACH1
67 chr21 37410447 37412953 circular_RNA/1 0 - SETD4
68 chr21 46600244 46605006 circular_RNA/1 0 + ADARB1
69 chr21 34951655 34957074 circular_RNA/2 0 - DONSON
70 chr21 47155305 47175366 circular_RNA/3 0 + PCBP3
71 chr21 17135209 17177577 circular_RNA/1 0 + USP25
72 chr21 34906884 34907626 circular_RNA/4 0 - GART
73 chr21 47916900 47931527 circular_RNA/1 0 + DIP2A
74 chr21 44424435 44448984 circular_RNA/3 0 + PKNOX1
75 chr21 34837648 34839429 circular_RNA/1 0 - TMEM50B
76 chr21 45153949 45163688 circular_RNA/2 0 + PDXK
77 chr21 40596333 40604424 circular_RNA/1 0 - BRWD1
78 chr21 37771818 37775149 circular_RNA/1 0 + CHAF1B
79 chr21 45475578 45479095 circular_RNA/1 0 + TRAPPC10
80 chr21 44424435 44430334 circular_RNA/1 0 + PKNOX1
81 chr21 27394155 27484463 circular_RNA/2 0 - APP
82 chr21 34053805 34056429 circular_RNA/2 0 - SYNJ1
83 chr21 35122447 35122627 circular_RNA/1 1 + ITSN1
84 chr21 45050202 45053302 circular_RNA/2 0 - HSF2BP
85 chr21 38560795 38564514 circular_RNA/1 0 + TTC3
86 chr21 37775055 37781763 circular_RNA/1 0 + CHAF1B
87 chr21 47693301 47697631 circular_RNA/2 0 - MCM3AP
88 chr21 44483062 44493451 circular_RNA/1 0 - CBSL
89 chr21 37571367 37572799 circular_RNA/1 0 + DOP1B
90 chr21 16386664 16415895 circular_RNA/52 0 - NRIP1
91 chr21 45499444 45500008 circular_RNA/1 0 + TRAPPC10
92 chr21 45736126 45739298 circular_RNA/1 0 + PFKL
93 chr21 33064661 33065797 circular_RNA/1 1 - SCAF4
94 chr21 37711071 37717005 circular_RNA/11 3 + MORC3
95 chr21 27423315 27425664 circular_RNA/5 0 - APP
96 chr21 44282391 44296877 circular_RNA/1 0 - WDR4
97 chr21 47904669 47918746 circular_RNA/1 0 + DIP2A
98 chr21 27347382 27369731 circular_RNA/4 0 - APP
99 chr21 34804483 34805178 circular_RNA/7 0 + IFNGR2
100 chr21 40619626 40630598 circular_RNA/6 0 - BRWD1
101 chr21 46893808 46896394 circular_RNA/1 0 + COL18A1
102 chr21 45165959 45168961 circular_RNA/3 0 + PDXK
103 chr21 37609559 37610999 circular_RNA/1 0 + DOP1B
104 chr21 40600425 40601362 circular_RNA/9 0 - BRWD1
105 chr21 46275124 46276279 circular_RNA/1 0 - PTTG1IP
106 chr21 44424435 44445057 circular_RNA/1 0 + PKNOX1
107 chr21 32537278 32575328 circular_RNA/2 0 - TIAM1
108 chr21 47699906 47700489 circular_RNA/1 0 - MCM3AP
109 chr21 40181958 40186316 circular_RNA/1 0 + ETS2
110 chr21 43938386 43955660 circular_RNA/1 0 + SLC37A1
111 chr21 48063446 48080874 circular_RNA/1 0 + PRMT2
112 chr21 45472160 45483666 circular_RNA/1 0 + TRAPPC10
113 chr21 17135209 17138460 circular_RNA/15 0 + USP25
114 chr21 32554737 32575328 circular_RNA/1 0 - TIAM1
115 chr21 45745035 45745147 circular_RNA/2 0 + PFKL
116 chr21 38439561 38441924 circular_RNA/1 0 - PIGP
117 chr21 47801608 47805898 circular_RNA/6 0 + PCNT
118 chr21 46275124 46281186 circular_RNA/7 0 - PTTG1IP
119 chr21 46548316 46554747 circular_RNA/20 0 + ADARB1
120 chr21 30698379 30702014 circular_RNA/1 0 + BACH1
121 chr21 35091101 35107509 circular_RNA/5 0 + ITSN1
122 chr21 47641767 47642652 circular_RNA/1 0 - LSS
123 chr21 32567539 32575328 circular_RNA/1 0 - TIAM1
124 chr21 32559316 32567621 circular_RNA/1 0 - TIAM1
125 chr21 44492094 44493451 circular_RNA/2 0 - CBSL
126 chr21 37716876 37721706 circular_RNA/1 0 + MORC3
127 chr21 27269884 27284274 circular_RNA/2 0 - APP
128 chr21 26969613 26972178 circular_RNA/1 0 - MRPL39