comparison process-cytogenetic-bands.py @ 13:c4bde687c846 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 0cfd88d16b0b20a66d4b21b037ddee6a8c440d88

12:290a11559985

with open(sys.argv[1], "r") as handle:
    for line in handle:
        if line.startswith("#"):
            continue

        lineData = dict(zip(COLS, line.split()))
        color = lineData.get("itemRgb", "gpos50")

        if color not in colormap:
            # Color MUST be an RGB triplet
            if color.count(",") != 2:

                int(tmp)
            except ValueError:
                # Does not look like an int
                continue

            colormap[color] = "gx-karyotype-%s" % len(colormap.keys())

            sys.stderr.write(
                "{colorName} = {color}\n".format(colorName=colormap[color], color=color)
            )

13:c4bde687c846

with open(sys.argv[1], "r") as handle:
    for line in handle:
        if line.startswith("#"):
            continue

        lineData = dict(list(zip(COLS, line.split())))
        color = lineData.get("itemRgb", "gpos50")

        if color not in colormap:
            # Color MUST be an RGB triplet
            if color.count(",") != 2:

                int(tmp)
            except ValueError:
                # Does not look like an int
                continue

            colormap[color] = "gx-karyotype-%s" % len(list(colormap.keys()))

            sys.stderr.write(
                "{colorName} = {color}\n".format(colorName=colormap[color], color=color)
            )