view karyotype/karyotype.rat.rn4.txt @ 11:31a35811dda6 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit b9ec351920dbc83fa14bd1f8cfdd0a6a19b89473"
author iuc
date Tue, 16 Nov 2021 09:20:08 +0000
parents 740057a5126d
children
line wrap: on
line source

chr - rn1 1 0 267910886 chr1
chr - rn2 2 0 258207540 chr2
chr - rn3 3 0 171063335 chr3
chr - rn4 4 0 187126005 chr4
chr - rn5 5 0 173096209 chr5
chr - rn6 6 0 147636619 chr6
chr - rn7 7 0 143002779 chr7
chr - rn8 8 0 129041809 chr8
chr - rn9 9 0 113440463 chr9
chr - rn10 10 0 110718848 chr10
chr - rn11 11 0 87759784 chr11
chr - rn12 12 0 46782294 chr12
chr - rn13 13 0 111154910 chr13
chr - rn14 14 0 112194335 chr14
chr - rn15 15 0 109758846 chr15
chr - rn16 16 0 90238779 chr16
chr - rn17 17 0 97296363 chr17
chr - rn18 18 0 87265094 chr18
chr - rn19 19 0 59218465 chr19
chr - rn20 20 0 55268282 chr20
chr - rnX x 0 160699376 chrx
band rn1 p13 p13 0 10142096 gneg
band rn1 p12 p12 10142096 24272657 gvar
band rn1 p11 p11 24272657 38517175 gneg
band rn1 q11 q11 38517175 48659271 gpos
band rn1 q12 q12 48659271 69741157 gneg
band rn1 q21 q21 69741157 90025350 gpos
band rn1 q22 q22 90025350 123756368 gneg
band rn1 q31 q31 123756368 141191657 gpos
band rn1 q32 q32 141191657 162273543 gneg
band rn1 q33 q33 162273543 170478385 gpos
band rn1 q34 q34 170478385 174466850 gneg
band rn1 q35 q35 174466850 179822789 gpos
band rn1 q36 q36 179822789 187913675 gneg
band rn1 q37 q37 187913675 190762578 gpos
band rn1 q41 q41 190762578 204893140 gneg
band rn1 q42 q42 204893140 207400175 gpos
band rn1 q43 q43 207400175 223240078 gneg
band rn1 q51 q51 223240078 231330964 gpos
band rn1 q52 q52 231330964 239421850 gneg
band rn1 q53 q53 239421850 245575482 gpos
band rn1 q54 q54 245575482 253666368 gneg
band rn1 q55 q55 253666368 267910886 gvar
band rn10 q11 q11 0 6254774 gpos
band rn10 q12 q12 6254774 26232711 gneg
band rn10 q21 q21 26232711 34821357 gpos
band rn10 q22 q22 34821357 47517616 gneg
band rn10 q23 q23 47517616 49851488 gpos
band rn10 q24 q24 49851488 63761360 gneg
band rn10 q25 q25 63761360 66468650 gpos
band rn10 q26 q26 66468650 83085813 gneg
band rn10 q31 q31 83085813 88033620 gpos
band rn10 q32.1 q32.1 88033620 103717234 gneg
band rn10 q32.2 q32.2 103717234 105397621 gpos
band rn10 q32.3 q32.3 105397621 110718848 gneg
band rn11 p12 p12 0 6656992 gvar
band rn11 p11 p11 6656992 15001672 gneg
band rn11 q11 q11 15001672 36660337 gpos
band rn11 q12 q12 36660337 48380393 gneg
band rn11 q21 q21 48380393 64975993 gpos
band rn11 q22 q22 64975993 76696050 gneg
band rn11 q23 q23 76696050 87759784 gpos
band rn12 p12 p12 0 5483638 gvar
band rn12 p11 p11 5483638 12566672 gneg
band rn12 q11 q11 12566672 18678644 gpos
band rn12 q12 q12 18678644 26846981 gneg
band rn12 q13 q13 26846981 28446376 gpos
band rn12 q14 q14 28446376 32501984 gneg
band rn12 q15 q15 32501984 33930015 gpos
band rn12 q16 q16 33930015 46782294 gneg
band rn13 p13 p13 0 17399939 gneg
band rn13 p12 p12 17399939 22926979 gvar
band rn13 p11 p11 22926979 30194013 gneg
band rn13 q11 q11 30194013 40019861 gpos
band rn13 q12 q12 40019861 42988086 gneg
band rn13 q13 q13 42988086 55679807 gpos
band rn13 q21 q21 55679807 71749163 gpos
band rn13 q22 q22 71749163 80142075 gneg
band rn13 q23 q23 80142075 83007948 gpos
band rn13 q24 q24 83007948 91093802 gneg
band rn13 q25 q25 91093802 93959675 gpos
band rn13 q26 q26 93959675 105627870 gneg
band rn13 q27 q27 105627870 111154910 gpos
band rn14 p22 p22 0 21145501 gneg
band rn14 p21 p21 21145501 31410307 gpos
band rn14 p11 p11 31410307 49271071 gneg
band rn14 q11 q11 49271071 68671555 gpos
band rn14 q21 q21 68671555 94949460 gpos
band rn14 q22 q22 94949460 112194335 gneg
band rn15 p16 p16 0 14498477 gneg
band rn15 p15 p15 14498477 17183380 gpos
band rn15 p14 p14 17183380 31681858 gneg
band rn15 p13 p13 31681858 34366761 gneg
band rn15 p12 p12 34366761 47791278 gvar
band rn15 p11 p11 47791278 54235046 gneg
band rn15 q11 q11 54235046 60356625 gpos
band rn15 q12 q12 60356625 71848011 gneg
band rn15 q21 q21 71848011 86776073 gpos
band rn15 q22 q22 86776073 91716295 gneg
band rn15 q23 q23 91716295 99341421 gpos
band rn15 q24 q24 99341421 106214773 gneg
band rn15 q25 q25 106214773 109758846 gpos
band rn16 p16 p16 0 10244998 gneg
band rn16 p15 p15 10244998 12107726 gpos
band rn16 p14 p14 12107726 25043330 gneg
band rn16 p13 p13 25043330 29389694 gneg
band rn16 p12 p12 29389694 34977875 gvar
band rn16 p11 p11 34977875 42325298 gneg
band rn16 q11 q11 42325298 51535449 gpos
band rn16 q12.1 q12.1 51535449 58882872 gneg
band rn16 q12.2 q12.2 58882872 61780448 gpos
band rn16 q12.3 q12.3 61780448 69231356 gneg
band rn16 q12.4 q12.4 69231356 71818477 gpos
band rn16 q12.5 q12.5 71818477 90238779 gneg
band rn17 p14 p14 0 22957568 gneg
band rn17 p13 p13 22957568 25253325 gneg
band rn17 p12 p12 25253325 42744806 gvar
band rn17 p11 p11 42744806 48648181 gneg
band rn17 q11 q11 48648181 54442234 gpos
band rn17 q12.1 q12.1 54442234 73136254 gneg
band rn17 q12.2 q12.2 73136254 75869298 gpos
band rn17 q12.3 q12.3 75869298 97296363 gneg
band rn18 p13 p13 0 10604365 gneg
band rn18 p12 p12 10604365 27505073 gvar
band rn18 p11 p11 27505073 37336204 gneg
band rn18 q11 q11 37336204 51033510 gpos
band rn18 q12.1 q12.1 51033510 67602832 gneg
band rn18 q12.2 q12.2 67602832 71469007 gpos
band rn18 q12.3 q12.3 71469007 82846608 gneg
band rn18 q13 q13 82846608 87265094 gpos
band rn19 p14 p14 0 4060256 gneg
band rn19 p13 p13 4060256 10571989 gneg
band rn19 p12 p12 10571989 12257379 gvar
band rn19 p11 p11 12257379 22369717 gneg
band rn19 q11 q11 22369717 35469792 gpos
band rn19 q12 q12 35469792 59218465 gneg
band rn2 q11 q11 0 15886252 gpos
band rn2 q12 q12 15886252 34569380 gneg
band rn2 q13 q13 34569380 37030630 gpos
band rn2 q14 q14 37030630 47770632 gneg
band rn2 q15 q15 47770632 50903132 gpos
band rn2 q16 q16 50903132 63656884 gneg
band rn2 q21 q21 63656884 72830636 gpos
band rn2 q22 q22 72830636 84801263 gneg
band rn2 q23 q23 84801263 97555015 gpos
band rn2 q24 q24 97555015 117468768 gneg
band rn2 q25 q25 117468768 126642519 gpos
band rn2 q26 q26 126642519 145437522 gneg
band rn2 q31 q31 145437522 159310024 gpos
band rn2 q32 q32 159310024 171280651 gneg
band rn2 q33 q33 171280651 174525027 gpos
band rn2 q34 q34 174525027 205178781 gneg
band rn2 q41 q41 205178781 219051283 gneg
band rn2 q42 q42 219051283 227106285 gpos
band rn2 q43 q43 227106285 235049411 gneg
band rn2 q44 q44 235049411 246236913 gneg
band rn2 q45 q45 246236913 258207540 gvar
band rn20 p12 p12 0 15959251 gvar
band rn20 p11 p11 15959251 26670159 gneg
band rn20 q11 q11 26670159 38023721 gpos
band rn20 q12 q12 38023721 45735574 gneg
band rn20 q13 q13 45735574 55268282 gpos
band rn3 p13 p13 0 5305065 gneg
band rn3 p12 p12 5305065 11010513 gvar
band rn3 p11 p11 11010513 16315578 gneg
band rn3 q11 q11 16315578 21320357 gpos
band rn3 q12 q12 21320357 39137369 gneg
band rn3 q21 q21 39137369 54151705 gpos
band rn3 q22 q22 54151705 55853329 gneg
band rn3 q23 q23 55853329 60557821 gpos
band rn3 q24 q24 60557821 78374833 gneg
band rn3 q31 q31 78374833 88284295 gpos
band rn3 q32 q32 88284295 91187067 gneg
band rn3 q33 q33 91187067 96191846 gpos
band rn3 q34 q34 96191846 99695191 gneg
band rn3 q35 q35 99695191 112207137 gpos
band rn3 q36 q36 112207137 128222429 gneg
band rn3 q41 q41 128222429 145338772 gneg
band rn3 q42 q42 145338772 165658174 gpos
band rn3 q43 q43 165658174 171063335 gneg
band rn4 q11 q11 0 15612157 gpos
band rn4 q12 q12 15612157 25397242 gneg
band rn4 q13 q13 25397242 31993929 gpos
band rn4 q21 q21 31993929 46176804 gpos
band rn4 q22 q22 46176804 69595041 gneg
band rn4 q23 q23 69595041 72343661 gpos
band rn4 q24 q24 72343661 92683444 gneg
band rn4 q31 q31 92683444 102908308 gpos
band rn4 q32 q32 102908308 104447535 gneg
band rn4 q33 q33 104447535 112253614 gpos
band rn4 q34 q34 112253614 136991188 gneg
band rn4 q41 q41 136991188 146776273 gneg
band rn4 q42 q42 146776273 170194509 gpos
band rn4 q43 q43 170194509 174152521 gneg
band rn4 q44 q44 174152521 187126005 gneg
band rn5 q11 q11 0 12292177 gpos
band rn5 q12 q12 12292177 20226219 gneg
band rn5 q13 q13 20226219 34529844 gpos
band rn5 q21 q21 34529844 51627145 gpos
band rn5 q22 q22 51627145 66824746 gneg
band rn5 q23 q23 66824746 69618423 gpos
band rn5 q24 q24 69618423 85486507 gneg
band rn5 q31 q31 85486507 104595256 gpos
band rn5 q32 q32 104595256 112194056 gneg
band rn5 q33 q33 112194056 123257016 gpos
band rn5 q34 q34 123257016 128509128 gneg
band rn5 q35 q35 128509128 135213952 gpos
band rn5 q36 q36 135213952 173096209 gneg
band rn6 q11 q11 0 3920547 gpos
band rn6 q12 q12 3920547 21058941 gneg
band rn6 q13 q13 21058941 25091504 gpos
band rn6 q14 q14 25091504 36629115 gneg
band rn6 q15 q15 36629115 40661678 gpos
band rn6 q16 q16 40661678 55783790 gneg
band rn6 q21 q21 55783790 67769464 gpos
band rn6 q22 q22 67769464 72138074 gneg
band rn6 q23 q23 72138074 83787701 gpos
band rn6 q24 q24 83787701 107647034 gneg
band rn6 q31 q31 107647034 119632707 gpos
band rn6 q32 q32 119632707 139571492 gneg
band rn6 q33 q33 139571492 147636619 gpos
band rn7 q11 q11 0 15273239 gpos
band rn7 q12 q12 15273239 18101617 gneg
band rn7 q13 q13 18101617 41068044 gpos
band rn7 q21 q21 41068044 52268420 gpos
band rn7 q22 q22 52268420 76479334 gneg
band rn7 q31 q31 76479334 91752574 gpos
band rn7 q32 q32 91752574 94580951 gneg
band rn7 q33 q33 94580951 104649976 gpos
band rn7 q34 q34 104649976 128860890 gneg
band rn7 q35 q35 128860890 136101537 gpos
band rn7 q36 q36 136101537 143002779 gneg
band rn8 q11 q11 0 11874368 gpos
band rn8 q12 q12 11874368 16813265 gneg
band rn8 q13 q13 16813265 31735037 gpos
band rn8 q21 q21 31735037 40351836 gpos
band rn8 q22 q22 40351836 48968634 gneg
band rn8 q23 q23 48968634 54222779 gpos
band rn8 q24 q24 54222779 82279915 gneg
band rn8 q31 q31 82279915 106554067 gpos
band rn8 q32 q32 106554067 129041809 gneg
band rn9 q11 q11 0 7255483 gpos
band rn9 q12 q12 7255483 17060190 gneg
band rn9 q13 q13 17060190 28237556 gpos
band rn9 q21 q21 28237556 41866100 gpos
band rn9 q22 q22 41866100 52357136 gneg
band rn9 q31 q31 52357136 62063796 gpos
band rn9 q32 q32 62063796 70103656 gneg
band rn9 q33 q33 70103656 78535705 gpos
band rn9 q34 q34 78535705 83732200 gneg
band rn9 q35 q35 83732200 90007212 gpos
band rn9 q36 q36 90007212 101184578 gneg
band rn9 q37 q37 101184578 107459591 gpos
band rn9 q38 q38 107459591 113440463 gneg
band rnX q11 q11 0 7738332 gpos
band rnX q12 q12 7738332 21538359 gneg
band rnX q13 q13 21538359 29792580 gpos
band rnX q14 q14 29792580 39465496 gneg
band rnX q21 q21 39465496 59585161 gpos
band rnX q22 q22 59585161 81252493 gneg
band rnX q31 q31 81252493 100985241 gpos
band rnX q32 q32 100985241 112463768 gneg
band rnX q33 q33 112463768 115688074 gpos
band rnX q34 q34 115688074 122523601 gneg
band rnX q35 q35 122523601 135420822 gpos
band rnX q36 q36 135420822 149220849 gneg
band rnX q37 q37 149220849 160699376 gpos