# HG changeset patch # User iuc # Date 1588332530 14400 # Node ID 740057a5126d2d133aa4cec493189f9bbb1eb1c3 # Parent a64dc31ab7f2159955b3385015525a1d911145bf "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 1584882716a1d2c598e8485da9d73bcf80d9b29a" diff -r a64dc31ab7f2 -r 740057a5126d circos.xml --- a/circos.xml Thu Jan 23 07:27:22 2020 -0500 +++ b/circos.xml Fri May 01 07:28:50 2020 -0400 @@ -1,6 +1,11 @@ visualizes data in a circular layout + + galactic_circos + + + macros.xml macros_conffiles.xml @@ -8,7 +13,14 @@ circos --version - + + + + + + + circos/conf/karyotype.txt && #else if $reference_genome.ref.ref_source == 'karyotype': cp $reference_genome.ref.input_karyotype circos/conf/karyotype.txt && @@ -38,23 +50,26 @@ python '$__tool_directory__/fasta-to-karyotype.py' genomeref.fa - '${ideogram.color}' + '${reference_genome.ref.color}' > circos/conf/karyotype.txt && +#else if $reference_genome.ref.ref_source == 'preset': + cp '$__tool_directory__/karyotype/'${reference_genome.ref.preset_karyotype} circos/conf/karyotype.txt && #end if touch circos/conf/karyotype-colors.conf && -#if $ideogram.bands.bands: - #if $ideogram.bands.convert_bands: - python '$__tool_directory__/process-cytogenetic-bands.py' - '${ideogram.bands.bands}' - >> circos/conf/karyotype.txt - 2> circos/conf/karyotype-colors.conf && - #else - cat '${ideogram.bands.bands}' - >> circos/conf/karyotype.txt && - #end if -#end if + +## #if $ideogram.bands.bands: +## #if $ideogram.bands.convert_bands: +## python '$__tool_directory__/process-cytogenetic-bands.py' +## '${ideogram.bands.bands}' +## >> circos/conf/karyotype.txt +## 2> circos/conf/karyotype-colors.conf && +## #else +## cat '${ideogram.bands.bands}' +## >> circos/conf/karyotype.txt && +## #end if +## #end if #if $plot_options.colour_profile: #if str($plot_options.colour_profile) == 'cg': @@ -66,15 +81,9 @@ cp '$ticks_conf' circos/conf/ticks.conf && cp '$ideogram_conf' circos/conf/ideogram.conf && cp '$data_conf' circos/conf/data.conf && -cp '$highlight_conf' circos/conf/highlight.conf && cp '$links_conf' circos/conf/links.conf && cp '$test_case_conf' circos/conf/galaxy_test_case.json && -## Highlights -#for $hi, $data in enumerate($sec_highlight.data): -cp '${data.data_source}' circos/data/highlight-${hi}.txt && -#end for - ## 2D Data Plots #for $hi, $data in enumerate($sec_tdd.data): cp '${data.plot_format.data_source}' circos/data/data-${hi}.txt && @@ -99,16 +108,16 @@ -
- + + - + + + + + + + + + + + + + + + + + + + + + + + +
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
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+ +
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+
+ @@ -154,10 +296,12 @@ + + @@ -185,11 +329,44 @@
- + + + + + + + + + + + + + + + + + + + + + + + + + + +
+ + +
+ + +
+
@@ -206,7 +383,7 @@ - +
@@ -252,11 +429,12 @@ - + + @@ -284,9 +462,24 @@
+ + +
+ + + + + + + + + +
+
+ @@ -299,6 +492,7 @@ + @@ -331,7 +525,6 @@ help="The radial position of the third control point (in addition to the two positions defined by the link coordinates) used to draw the Bezier curve; if this parameter is 0 then straight lines will be used"/>
-
+ -
- - - - - - - - - - - - - - -
+
+ + -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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- -
- - - - - - - -
+ + + +
- - + @@ -478,16 +604,11 @@
-
- - - - - - - - - +
+ + + +
@@ -506,12 +627,25 @@ outputs['tar'] + + reference_genome['ref']['ref_source'] != 'karyotype' and reference_genome['ref']['ref_source'] != 'preset' + `__, we're looking for more cool plots with scientifically relevant stories to share with the students who want to learn how to use Circos. + + Have a feature request? `Share it with us! `__ + +.. class:: warningmark + + No data or plot crashes? Check that your chromosome naming scheme matches between your Karyotype file and your datasets. + Circos is a software package for visualizing data and information. It visualizes data in a circular layout — this makes Circos ideal for exploring relationships between objects or positions. There are other reasons why a circular layout is advantageous, not the least being the fact that it is attractive. Circos is ideal for creating publication-quality infographics and illustrations with a high data-to-ink ratio, richly layered data and pleasant symmetries. You have fine control each element in the figure to tailor its focus points and detail to your audience. diff -r a64dc31ab7f2 -r 740057a5126d fasta-to-karyotype.py --- a/fasta-to-karyotype.py Thu Jan 23 07:27:22 2020 -0500 +++ b/fasta-to-karyotype.py Fri May 01 07:28:50 2020 -0400 @@ -6,7 +6,7 @@ # Process fasta data, extracting only headers for idx, seq in enumerate(SeqIO.parse(sys.argv[1], "fasta")): sys.stdout.write( - "chr - {seq_id} {seq_id} 0 {length} {theme}-{color}\n".format( + "chr - {seq_id} {seq_id} 0 {length} {theme}-{color}\n".format( seq_id=seq.id, idx=idx, length=len(seq), diff -r a64dc31ab7f2 -r 740057a5126d genome-lengths-to-karyotype.py --- a/genome-lengths-to-karyotype.py Thu Jan 23 07:27:22 2020 -0500 +++ b/genome-lengths-to-karyotype.py Fri May 01 07:28:50 2020 -0400 @@ -14,7 +14,7 @@ length = row[1] sys.stdout.write( - "chr - {seq_id} {seq_id} 0 {length} {theme}-{color}\n".format( + "chr - {seq_id} {seq_id} 0 {length} {theme}-{color}\n".format( seq_id=seq_id, 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+0000 +++ b/karyotype/karyotype.human.hg16.txt Fri May 01 07:28:50 2020 -0400 @@ -0,0 +1,886 @@ +chr - hsX X 0 153692391 chrx +chr - hsY Y 0 50286555 chry +chr - hs1 1 0 246127941 chr1 +chr - hs2 2 0 243615958 chr2 +chr - hs3 3 0 199344050 chr3 +chr - hs4 4 0 191731959 chr4 +chr - hs5 5 0 181034922 chr5 +chr - hs6 6 0 170914576 chr6 +chr - hs7 7 0 158545518 chr7 +chr - hs8 8 0 146308819 chr8 +chr - hs9 9 0 136372045 chr9 +chr - hs10 10 0 135037215 chr10 +chr - hs11 11 0 134482954 chr11 +chr - hs12 12 0 132078379 chr12 +chr - hs13 13 0 113042980 chr13 +chr - hs14 14 0 105311216 chr14 +chr - hs15 15 0 100256656 chr15 +chr - hs16 16 0 90041932 chr16 +chr - hs17 17 0 81860266 chr17 +chr - hs18 18 0 76115139 chr18 +chr - hs19 19 0 63811651 chr19 +chr - hs20 20 0 63741868 chr20 +chr - hs21 21 0 46976097 chr21 +chr - hs22 22 0 49396972 chr22 +band hs1 p36.33 p36.33 0 2200000 gneg +band hs1 p36.32 p36.32 2200000 5100000 gpos25 +band hs1 p36.31 p36.31 5100000 6900000 gneg +band hs1 p36.23 p36.23 6900000 8800000 gpos25 +band hs1 p36.22 p36.22 8800000 12100000 gneg +band hs1 p36.21 p36.21 12100000 15200000 gpos50 +band hs1 p36.13 p36.13 15200000 19900000 gneg +band hs1 p36.12 p36.12 19900000 23400000 gpos25 +band hs1 p36.11 p36.11 23400000 27600000 gneg +band hs1 p35.3 p35.3 27600000 30000000 gpos25 +band hs1 p35.2 p35.2 30000000 32300000 gneg +band hs1 p35.1 p35.1 32300000 34300000 gpos25 +band hs1 p34.3 p34.3 34300000 39600000 gneg +band hs1 p34.2 p34.2 39600000 43600000 gpos25 +band hs1 p34.1 p34.1 43600000 46100000 gneg +band hs1 p33 p33 46100000 50100000 gpos75 +band hs1 p32.3 p32.3 50100000 55400000 gneg +band hs1 p32.2 p32.2 55400000 58300000 gpos50 +band hs1 p32.1 p32.1 58300000 60600000 gneg +band hs1 p31.3 p31.3 60600000 65100000 gpos50 +band hs1 p31.2 p31.2 65100000 69100000 gneg +band hs1 p31.1 p31.1 69100000 84300000 gpos100 +band hs1 p22.3 p22.3 84300000 87800000 gneg +band hs1 p22.2 p22.2 87800000 91500000 gpos75 +band hs1 p22.1 p22.1 91500000 94200000 gneg 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q33.1 q33.1 99400000 102600000 gpos100 +band hs13 q33.2 q33.2 102600000 104800000 gneg +band hs13 q33.3 q33.3 104800000 108000000 gpos100 +band hs13 q34 q34 108000000 113042980 gneg +band hs14 p13 p13 0 3100000 gvar +band hs14 p12 p12 3100000 6700000 stalk +band hs14 p11.2 p11.2 6700000 13600000 gvar +band hs14 p11.1 p11.1 13600000 15600000 acen +band hs14 q11.1 q11.1 15600000 18000000 acen +band hs14 q11.2 q11.2 18000000 23200000 gneg +band hs14 q12 q12 23200000 31300000 gpos100 +band hs14 q13.1 q13.1 31300000 33200000 gneg +band hs14 q13.2 q13.2 33200000 34300000 gpos50 +band hs14 q13.3 q13.3 34300000 35800000 gneg +band hs14 q21.1 q21.1 35800000 41500000 gpos100 +band hs14 q21.2 q21.2 41500000 45200000 gneg +band hs14 q21.3 q21.3 45200000 49000000 gpos100 +band hs14 q22.1 q22.1 49000000 52200000 gneg +band hs14 q22.2 q22.2 52200000 53500000 gpos25 +band hs14 q22.3 q22.3 53500000 56100000 gneg +band hs14 q23.1 q23.1 56100000 60100000 gpos75 +band hs14 q23.2 q23.2 60100000 62900000 gneg +band hs14 q23.3 q23.3 62900000 65900000 gpos50 +band hs14 q24.1 q24.1 65900000 68200000 gneg +band hs14 q24.2 q24.2 68200000 71800000 gpos50 +band hs14 q24.3 q24.3 71800000 77300000 gneg +band hs14 q31.1 q31.1 77300000 81300000 gpos100 +band hs14 q31.2 q31.2 81300000 82400000 gneg +band hs14 q31.3 q31.3 82400000 87000000 gpos100 +band hs14 q32.11 q32.11 87000000 89500000 gneg +band hs14 q32.12 q32.12 89500000 92700000 gpos25 +band hs14 q32.13 q32.13 92700000 94300000 gneg +band hs14 q32.2 q32.2 94300000 99300000 gpos50 +band hs14 q32.31 q32.31 99300000 100400000 gneg +band hs14 q32.32 q32.32 100400000 102100000 gpos50 +band hs14 q32.33 q32.33 102100000 105311216 gneg +band hs15 p13 p13 0 3500000 gvar +band hs15 p12 p12 3500000 7900000 stalk +band hs15 p11.2 p11.2 7900000 14100000 gvar +band hs15 p11.1 p11.1 14100000 17000000 acen +band hs15 q11.1 q11.1 17000000 18200000 acen +band hs15 q11.2 q11.2 18200000 23000000 gneg +band hs15 q12 q12 23000000 25700000 gpos50 +band hs15 q13.1 q13.1 25700000 28000000 gneg +band hs15 q13.2 q13.2 28000000 28900000 gpos50 +band hs15 q13.3 q13.3 28900000 31400000 gneg +band hs15 q14 q14 31400000 37800000 gpos75 +band hs15 q15.1 q15.1 37800000 40600000 gneg +band hs15 q15.2 q15.2 40600000 41300000 gpos25 +band hs15 q15.3 q15.3 41300000 42600000 gneg +band hs15 q21.1 q21.1 42600000 47400000 gpos75 +band hs15 q21.2 q21.2 47400000 50600000 gneg +band hs15 q21.3 q21.3 50600000 56900000 gpos75 +band hs15 q22.1 q22.1 56900000 57000000 gneg +band hs15 q22.2 q22.2 57000000 61400000 gpos25 +band hs15 q22.31 q22.31 61400000 64900000 gneg +band hs15 q22.32 q22.32 64900000 65000000 gpos25 +band hs15 q22.33 q22.33 65000000 65200000 gneg +band hs15 q23 q23 65200000 70400000 gpos25 +band hs15 q24.1 q24.1 70400000 73000000 gneg +band hs15 q24.2 q24.2 73000000 74300000 gpos25 +band hs15 q24.3 q24.3 74300000 76000000 gneg +band hs15 q25.1 q25.1 76000000 79500000 gpos50 +band hs15 q25.2 q25.2 79500000 82900000 gneg +band hs15 q25.3 q25.3 82900000 86800000 gpos50 +band hs15 q26.1 q26.1 86800000 92000000 gneg +band hs15 q26.2 q26.2 92000000 96200000 gpos50 +band hs15 q26.3 q26.3 96200000 100256656 gneg +band hs16 p13.3 p13.3 0 6400000 gneg +band hs16 p13.2 p13.2 6400000 10400000 gpos50 +band hs16 p13.13 p13.13 10400000 12600000 gneg +band hs16 p13.12 p13.12 12600000 14800000 gpos50 +band hs16 p13.11 p13.11 14800000 16700000 gneg +band hs16 p12.3 p12.3 16700000 21200000 gpos50 +band hs16 p12.2 p12.2 21200000 24200000 gneg +band hs16 p12.1 p12.1 24200000 28700000 gpos50 +band hs16 p11.2 p11.2 28700000 35700000 gneg +band hs16 p11.1 p11.1 35700000 39400000 acen +band hs16 q11.1 q11.1 39400000 41900000 acen +band hs16 q11.2 q11.2 41900000 46800000 gvar +band hs16 q12.1 q12.1 46800000 52300000 gneg +band hs16 q12.2 q12.2 52300000 56500000 gpos50 +band hs16 q13 q13 56500000 57900000 gneg +band hs16 q21 q21 57900000 65100000 gpos100 +band hs16 q22.1 q22.1 65100000 70600000 gneg +band hs16 q22.2 q22.2 70600000 72700000 gpos50 +band hs16 q22.3 q22.3 72700000 75100000 gneg +band hs16 q23.1 q23.1 75100000 79800000 gpos75 +band hs16 q23.2 q23.2 79800000 81800000 gneg +band hs16 q23.3 q23.3 81800000 83900000 gpos50 +band hs16 q24.1 q24.1 83900000 86800000 gneg +band hs16 q24.2 q24.2 86800000 88500000 gpos25 +band hs16 q24.3 q24.3 88500000 90041932 gneg +band hs17 p13.3 p13.3 0 3300000 gneg +band hs17 p13.2 p13.2 3300000 6600000 gpos50 +band hs17 p13.1 p13.1 6600000 10900000 gneg +band hs17 p12 p12 10900000 16200000 gpos75 +band hs17 p11.2 p11.2 16200000 22400000 gneg +band hs17 p11.1 p11.1 22400000 24000000 acen +band hs17 q11.1 q11.1 24000000 25900000 acen +band hs17 q11.2 q11.2 25900000 33400000 gneg +band hs17 q12 q12 33400000 38300000 gpos50 +band hs17 q21.1 q21.1 38300000 38700000 gneg +band hs17 q21.2 q21.2 38700000 41300000 gpos25 +band hs17 q21.31 q21.31 41300000 45400000 gneg +band hs17 q21.32 q21.32 45400000 48000000 gpos25 +band hs17 q21.33 q21.33 48000000 50600000 gneg +band hs17 q22 q22 50600000 54100000 gpos75 +band hs17 q23.1 q23.1 54100000 54400000 gneg +band hs17 q23.2 q23.2 54400000 60600000 gpos75 +band hs17 q23.3 q23.3 60600000 63000000 gneg +band hs17 q24.1 q24.1 63000000 64700000 gpos50 +band hs17 q24.2 q24.2 64700000 67700000 gneg +band hs17 q24.3 q24.3 67700000 71500000 gpos75 +band hs17 q25.1 q25.1 71500000 75400000 gneg +band hs17 q25.2 q25.2 75400000 75900000 gpos25 +band hs17 q25.3 q25.3 75900000 81860266 gneg +band hs18 p11.32 p11.32 0 2900000 gneg +band hs18 p11.31 p11.31 2900000 7100000 gpos50 +band hs18 p11.23 p11.23 7100000 8400000 gneg +band hs18 p11.22 p11.22 8400000 10800000 gpos25 +band hs18 p11.21 p11.21 10800000 15300000 gneg +band hs18 p11.1 p11.1 15300000 16000000 acen +band hs18 q11.1 q11.1 16000000 17300000 acen +band hs18 q11.2 q11.2 17300000 23300000 gneg +band hs18 q12.1 q12.1 23300000 31000000 gpos100 +band hs18 q12.2 q12.2 31000000 35400000 gneg +band hs18 q12.3 q12.3 35400000 41700000 gpos75 +band hs18 q21.1 q21.1 41700000 48400000 gneg +band hs18 q21.2 q21.2 48400000 52500000 gpos75 +band hs18 q21.31 q21.31 52500000 54600000 gneg +band hs18 q21.32 q21.32 54600000 57100000 gpos50 +band hs18 q21.33 q21.33 57100000 59800000 gneg +band hs18 q22.1 q22.1 59800000 64900000 gpos100 +band hs18 q22.2 q22.2 64900000 66900000 gneg +band hs18 q22.3 q22.3 66900000 71300000 gpos25 +band hs18 q23 q23 71300000 76115139 gneg +band hs19 p13.3 p13.3 0 6900000 gneg +band hs19 p13.2 p13.2 6900000 13800000 gpos25 +band hs19 p13.13 p13.13 13800000 14400000 gneg +band hs19 p13.12 p13.12 14400000 16700000 gpos25 +band hs19 p13.11 p13.11 16700000 23500000 gneg +band hs19 p12 p12 23500000 26700000 gvar +band hs19 p11 p11 26700000 28500000 acen +band hs19 q11 q11 28500000 30200000 acen +band hs19 q12 q12 30200000 37100000 gvar +band hs19 q13.11 q13.11 37100000 39900000 gneg +band hs19 q13.12 q13.12 39900000 42200000 gpos25 +band hs19 q13.13 q13.13 42200000 43400000 gneg +band hs19 q13.2 q13.2 43400000 48100000 gpos25 +band hs19 q13.31 q13.31 48100000 49800000 gneg +band hs19 q13.32 q13.32 49800000 52700000 gpos25 +band hs19 q13.33 q13.33 52700000 56000000 gneg +band hs19 q13.41 q13.41 56000000 58400000 gpos25 +band hs19 q13.42 q13.42 58400000 61100000 gneg +band hs19 q13.43 q13.43 61100000 63811651 gpos25 +band hs2 p25.3 p25.3 0 3900000 gneg +band hs2 p25.2 p25.2 3900000 7100000 gpos50 +band hs2 p25.1 p25.1 7100000 12200000 gneg +band hs2 p24.3 p24.3 12200000 16700000 gpos75 +band hs2 p24.2 p24.2 16700000 19200000 gneg +band hs2 p24.1 p24.1 19200000 24100000 gpos75 +band hs2 p23.3 p23.3 24100000 27900000 gneg +band hs2 p23.2 p23.2 27900000 30000000 gpos25 +band hs2 p23.1 p23.1 30000000 32000000 gneg +band hs2 p22.3 p22.3 32000000 36500000 gpos75 +band hs2 p22.2 p22.2 36500000 38500000 gneg +band hs2 p22.1 p22.1 38500000 41700000 gpos50 +band hs2 p21 p21 41700000 47700000 gneg +band hs2 p16.3 p16.3 47700000 52900000 gpos100 +band hs2 p16.2 p16.2 52900000 55000000 gneg +band hs2 p16.1 p16.1 55000000 61200000 gpos100 +band hs2 p15 p15 61200000 64100000 gneg +band hs2 p14 p14 64100000 68600000 gpos50 +band hs2 p13.3 p13.3 68600000 71500000 gneg +band hs2 p13.2 p13.2 71500000 73500000 gpos50 +band hs2 p13.1 p13.1 73500000 75000000 gneg +band hs2 p12 p12 75000000 83300000 gpos100 +band hs2 p11.2 p11.2 83300000 91400000 gneg +band hs2 p11.1 p11.1 91400000 93500000 acen +band hs2 q11.1 q11.1 93500000 96300000 acen +band hs2 q11.2 q11.2 96300000 102800000 gneg +band hs2 q12.1 q12.1 102800000 105700000 gpos50 +band hs2 q12.2 q12.2 105700000 107100000 gneg +band hs2 q12.3 q12.3 107100000 110100000 gpos25 +band hs2 q13 q13 110100000 114500000 gneg +band hs2 q14.1 q14.1 114500000 118900000 gpos50 +band hs2 q14.2 q14.2 118900000 122400000 gneg +band hs2 q14.3 q14.3 122400000 130000000 gpos50 +band hs2 q21.1 q21.1 130000000 132700000 gneg +band hs2 q21.2 q21.2 132700000 135300000 gpos25 +band hs2 q21.3 q21.3 135300000 137800000 gneg +band hs2 q22.1 q22.1 137800000 142800000 gpos100 +band hs2 q22.2 q22.2 142800000 144300000 gneg 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gpos100 +band hs2 q37.1 q37.1 231200000 236000000 gneg +band hs2 q37.2 q37.2 236000000 237600000 gpos50 +band hs2 q37.3 q37.3 237600000 243615958 gneg +band hs20 p13 p13 0 5000000 gneg +band hs20 p12.3 p12.3 5000000 9100000 gpos75 +band hs20 p12.2 p12.2 9100000 11900000 gneg +band hs20 p12.1 p12.1 11900000 17800000 gpos75 +band hs20 p11.23 p11.23 17800000 21300000 gneg +band hs20 p11.22 p11.22 21300000 22400000 gpos25 +band hs20 p11.21 p11.21 22400000 25800000 gneg +band hs20 p11.1 p11.1 25800000 27800000 acen +band hs20 q11.1 q11.1 27800000 29700000 acen +band hs20 q11.21 q11.21 29700000 32700000 gneg +band hs20 q11.22 q11.22 32700000 35100000 gpos25 +band hs20 q11.23 q11.23 35100000 38300000 gneg +band hs20 q12 q12 38300000 42400000 gpos75 +band hs20 q13.11 q13.11 42400000 42800000 gneg +band hs20 q13.12 q13.12 42800000 47100000 gpos25 +band hs20 q13.13 q13.13 47100000 50500000 gneg +band hs20 q13.2 q13.2 50500000 54800000 gpos75 +band hs20 q13.31 q13.31 54800000 56600000 gneg +band hs20 q13.32 q13.32 56600000 58800000 gpos50 +band hs20 q13.33 q13.33 58800000 63741868 gneg +band hs21 p13 p13 0 3000000 gvar +band hs21 p12 p12 3000000 6500000 stalk +band hs21 p11.2 p11.2 6500000 10100000 gvar +band hs21 p11.1 p11.1 10100000 12300000 acen +band hs21 q11.1 q11.1 12300000 13200000 acen +band hs21 q11.2 q11.2 13200000 15300000 gneg +band hs21 q21.1 q21.1 15300000 22900000 gpos100 +band hs21 q21.2 q21.2 22900000 25800000 gneg +band hs21 q21.3 q21.3 25800000 30500000 gpos75 +band hs21 q22.11 q22.11 30500000 34700000 gneg +band hs21 q22.12 q22.12 34700000 36700000 gpos50 +band hs21 q22.13 q22.13 36700000 38600000 gneg +band hs21 q22.2 q22.2 38600000 41400000 gpos50 +band hs21 q22.3 q22.3 41400000 46976097 gneg +band hs22 p13 p13 0 3000000 gvar +band hs22 p12 p12 3000000 6600000 stalk +band hs22 p11.2 p11.2 6600000 9600000 gvar +band hs22 p11.1 p11.1 9600000 11800000 acen +band hs22 q11.1 q11.1 11800000 16300000 acen +band hs22 q11.21 q11.21 16300000 20500000 gneg +band hs22 q11.22 q11.22 20500000 21800000 gpos25 +band hs22 q11.23 q11.23 21800000 24300000 gneg +band hs22 q12.1 q12.1 24300000 27900000 gpos50 +band hs22 q12.2 q12.2 27900000 30500000 gneg +band hs22 q12.3 q12.3 30500000 35800000 gpos50 +band hs22 q13.1 q13.1 35800000 39200000 gneg +band hs22 q13.2 q13.2 39200000 42500000 gpos50 +band hs22 q13.31 q13.31 42500000 46700000 gneg +band hs22 q13.32 q13.32 46700000 47700000 gpos50 +band hs22 q13.33 q13.33 47700000 49396972 gneg +band hs3 p26.3 p26.3 0 2800000 gpos50 +band hs3 p26.2 p26.2 2800000 4000000 gneg +band hs3 p26.1 p26.1 4000000 8200000 gpos50 +band hs3 p25.3 p25.3 8200000 11800000 gneg +band hs3 p25.2 p25.2 11800000 13400000 gpos25 +band hs3 p25.1 p25.1 13400000 16400000 gneg +band hs3 p24.3 p24.3 16400000 23800000 gpos100 +band hs3 p24.2 p24.2 23800000 27000000 gneg +band hs3 p24.1 p24.1 27000000 32200000 gpos75 +band hs3 p23 p23 32200000 35000000 gneg +band hs3 p22.3 p22.3 35000000 38200000 gpos50 +band hs3 p22.2 p22.2 38200000 39900000 gneg +band hs3 p22.1 p22.1 39900000 43600000 gpos75 +band hs3 p21.33 p21.33 43600000 44400000 gneg +band hs3 p21.32 p21.32 44400000 44700000 gpos50 +band hs3 p21.31 p21.31 44700000 51400000 gneg +band hs3 p21.2 p21.2 51400000 52300000 gpos25 +band hs3 p21.1 p21.1 52300000 54400000 gneg +band hs3 p14.3 p14.3 54400000 58500000 gpos50 +band hs3 p14.2 p14.2 58500000 63700000 gneg +band hs3 p14.1 p14.1 63700000 69700000 gpos50 +band hs3 p13 p13 69700000 74000000 gneg +band hs3 p12.3 p12.3 74000000 79800000 gpos75 +band hs3 p12.2 p12.2 79800000 83500000 gneg +band hs3 p12.1 p12.1 83500000 87200000 gpos75 +band hs3 p11.2 p11.2 87200000 87900000 gneg +band hs3 p11.1 p11.1 87900000 91600000 acen +band hs3 q11.1 q11.1 91600000 93100000 acen +band hs3 q11.2 q11.2 93100000 99000000 gvar +band hs3 q12.1 q12.1 99000000 101200000 gneg +band hs3 q12.2 q12.2 101200000 102200000 gpos25 +band hs3 q12.3 q12.3 102200000 104100000 gneg +band hs3 q13.11 q13.11 104100000 107500000 gpos75 +band hs3 q13.12 q13.12 107500000 109200000 gneg +band hs3 q13.13 q13.13 109200000 112600000 gpos50 +band hs3 q13.2 q13.2 112600000 114800000 gneg +band hs3 q13.31 q13.31 114800000 118700000 gpos75 +band hs3 q13.32 q13.32 118700000 120100000 gneg +band hs3 q13.33 q13.33 120100000 122700000 gpos75 +band hs3 q21.1 q21.1 122700000 124800000 gneg +band hs3 q21.2 q21.2 124800000 126900000 gpos25 +band hs3 q21.3 q21.3 126900000 130500000 gneg +band hs3 q22.1 q22.1 130500000 135000000 gpos25 +band hs3 q22.2 q22.2 135000000 137000000 gneg +band hs3 q22.3 q22.3 137000000 140000000 gpos25 +band hs3 q23 q23 140000000 144100000 gneg +band hs3 q24 q24 144100000 150200000 gpos100 +band hs3 q25.1 q25.1 150200000 153400000 gneg +band hs3 q25.2 q25.2 153400000 156400000 gpos50 +band hs3 q25.31 q25.31 156400000 158400000 gneg +band hs3 q25.32 q25.32 158400000 160400000 gpos50 +band hs3 q25.33 q25.33 160400000 162000000 gneg +band hs3 q26.1 q26.1 162000000 169100000 gpos100 +band hs3 q26.2 q26.2 169100000 172600000 gneg +band hs3 q26.31 q26.31 172600000 177300000 gpos75 +band hs3 q26.32 q26.32 177300000 180500000 gneg +band hs3 q26.33 q26.33 180500000 184000000 gpos75 +band hs3 q27.1 q27.1 184000000 185800000 gneg +band hs3 q27.2 q27.2 185800000 187300000 gpos25 +band hs3 q27.3 q27.3 187300000 189300000 gneg +band hs3 q28 q28 189300000 193700000 gpos75 +band hs3 q29 q29 193700000 199344050 gneg +band hs4 p16.3 p16.3 0 4500000 gneg +band hs4 p16.2 p16.2 4500000 5900000 gpos25 +band hs4 p16.1 p16.1 5900000 11000000 gneg +band hs4 p15.33 p15.33 11000000 15500000 gpos50 +band hs4 p15.32 p15.32 15500000 18700000 gneg +band hs4 p15.31 p15.31 18700000 22800000 gpos75 +band hs4 p15.2 p15.2 22800000 28000000 gneg +band hs4 p15.1 p15.1 28000000 35700000 gpos100 +band hs4 p14 p14 35700000 41200000 gneg +band hs4 p13 p13 41200000 45900000 gpos50 +band hs4 p12 p12 45900000 48900000 gneg +band hs4 p11 p11 48900000 50900000 acen +band hs4 q11 q11 50900000 53200000 acen +band hs4 q12 q12 53200000 59800000 gneg +band hs4 q13.1 q13.1 59800000 66600000 gpos100 +band hs4 q13.2 q13.2 66600000 70700000 gneg +band hs4 q13.3 q13.3 70700000 76700000 gpos75 +band hs4 q21.1 q21.1 76700000 79300000 gneg +band hs4 q21.21 q21.21 79300000 82900000 gpos50 +band hs4 q21.22 q21.22 82900000 84600000 gneg +band hs4 q21.23 q21.23 84600000 87400000 gpos25 +band hs4 q21.3 q21.3 87400000 88500000 gneg +band hs4 q22.1 q22.1 88500000 93400000 gpos75 +band hs4 q22.2 q22.2 93400000 93600000 gneg +band hs4 q22.3 q22.3 93600000 99300000 gpos75 +band hs4 q23 q23 99300000 101500000 gneg +band hs4 q24 q24 101500000 108300000 gpos50 +band hs4 q25 q25 108300000 114600000 gneg +band hs4 q26 q26 114600000 121200000 gpos75 +band hs4 q27 q27 121200000 124400000 gneg +band hs4 q28.1 q28.1 124400000 129300000 gpos50 +band hs4 q28.2 q28.2 129300000 131600000 gneg +band hs4 q28.3 q28.3 131600000 140000000 gpos100 +band hs4 q31.1 q31.1 140000000 142100000 gneg +band hs4 q31.21 q31.21 142100000 147400000 gpos25 +band hs4 q31.22 q31.22 147400000 149100000 gneg +band hs4 q31.23 q31.23 149100000 152200000 gpos25 +band hs4 q31.3 q31.3 152200000 156100000 gneg +band hs4 q32.1 q32.1 156100000 162400000 gpos100 +band hs4 q32.2 q32.2 162400000 165200000 gneg +band hs4 q32.3 q32.3 165200000 170800000 gpos100 +band hs4 q33 q33 170800000 172600000 gneg +band hs4 q34.1 q34.1 172600000 177000000 gpos75 +band hs4 q34.2 q34.2 177000000 178200000 gneg +band hs4 q34.3 q34.3 178200000 183900000 gpos100 +band hs4 q35.1 q35.1 183900000 187800000 gneg +band hs4 q35.2 q35.2 187800000 191731959 gpos25 +band hs5 p15.33 p15.33 0 4500000 gneg +band hs5 p15.32 p15.32 4500000 6400000 gpos25 +band hs5 p15.31 p15.31 6400000 9900000 gneg +band hs5 p15.2 p15.2 9900000 15100000 gpos50 +band hs5 p15.1 p15.1 15100000 18500000 gneg +band hs5 p14.3 p14.3 18500000 23300000 gpos100 +band hs5 p14.2 p14.2 23300000 24600000 gneg +band hs5 p14.1 p14.1 24600000 29200000 gpos100 +band hs5 p13.3 p13.3 29200000 34400000 gneg +band hs5 p13.2 p13.2 34400000 38500000 gpos25 +band hs5 p13.1 p13.1 38500000 42400000 gneg +band hs5 p12 p12 42400000 45800000 gpos50 +band hs5 p11 p11 45800000 47700000 acen +band hs5 q11.1 q11.1 47700000 50500000 acen +band hs5 q11.2 q11.2 50500000 58900000 gneg +band hs5 q12.1 q12.1 58900000 63000000 gpos75 +band hs5 q12.2 q12.2 63000000 63200000 gneg +band hs5 q12.3 q12.3 63200000 66700000 gpos75 +band hs5 q13.1 q13.1 66700000 68400000 gneg +band hs5 q13.2 q13.2 68400000 73400000 gpos50 +band hs5 q13.3 q13.3 73400000 76900000 gneg +band hs5 q14.1 q14.1 76900000 81400000 gpos50 +band hs5 q14.2 q14.2 81400000 82900000 gneg +band hs5 q14.3 q14.3 82900000 92400000 gpos100 +band hs5 q15 q15 92400000 98300000 gneg +band hs5 q21.1 q21.1 98300000 102900000 gpos100 +band hs5 q21.2 q21.2 102900000 104600000 gneg +band hs5 q21.3 q21.3 104600000 109700000 gpos100 +band hs5 q22.1 q22.1 109700000 111600000 gneg +band hs5 q22.2 q22.2 111600000 113200000 gpos50 +band hs5 q22.3 q22.3 113200000 115300000 gneg +band hs5 q23.1 q23.1 115300000 121500000 gpos100 +band hs5 q23.2 q23.2 121500000 128000000 gneg +band hs5 q23.3 q23.3 128000000 132300000 gpos100 +band hs5 q31.1 q31.1 132300000 136800000 gneg +band hs5 q31.2 q31.2 136800000 139100000 gpos25 +band hs5 q31.3 q31.3 139100000 143200000 gneg +band hs5 q32 q32 143200000 147300000 gpos75 +band hs5 q33.1 q33.1 147300000 152100000 gneg +band hs5 q33.2 q33.2 152100000 155600000 gpos50 +band hs5 q33.3 q33.3 155600000 159900000 gneg +band hs5 q34 q34 159900000 168400000 gpos100 +band hs5 q35.1 q35.1 168400000 172800000 gneg +band hs5 q35.2 q35.2 172800000 176600000 gpos25 +band hs5 q35.3 q35.3 176600000 181034922 gneg +band hs6 p25.3 p25.3 0 2300000 gneg +band hs6 p25.2 p25.2 2300000 4100000 gpos25 +band hs6 p25.1 p25.1 4100000 7000000 gneg +band hs6 p24.3 p24.3 7000000 10600000 gpos50 +band hs6 p24.2 p24.2 10600000 11700000 gneg +band hs6 p24.1 p24.1 11700000 13500000 gpos25 +band hs6 p23 p23 13500000 15300000 gneg +band hs6 p22.3 p22.3 15300000 24100000 gpos75 +band hs6 p22.2 p22.2 24100000 26500000 gneg +band hs6 p22.1 p22.1 26500000 30200000 gpos50 +band hs6 p21.33 p21.33 30200000 32000000 gneg +band hs6 p21.32 p21.32 32000000 33500000 gpos25 +band hs6 p21.31 p21.31 33500000 36800000 gneg +band hs6 p21.2 p21.2 36800000 40500000 gpos25 +band hs6 p21.1 p21.1 40500000 46200000 gneg +band hs6 p12.3 p12.3 46200000 51800000 gpos100 +band hs6 p12.2 p12.2 51800000 52900000 gneg +band hs6 p12.1 p12.1 52900000 57100000 gpos100 +band hs6 p11.2 p11.2 57100000 58700000 gneg +band hs6 p11.1 p11.1 58700000 60500000 acen +band hs6 q11.1 q11.1 60500000 63300000 acen +band hs6 q11.2 q11.2 63300000 63400000 gneg +band hs6 q12 q12 63400000 70000000 gpos100 +band hs6 q13 q13 70000000 75900000 gneg +band hs6 q14.1 q14.1 75900000 83800000 gpos50 +band hs6 q14.2 q14.2 83800000 84900000 gneg +band hs6 q14.3 q14.3 84900000 88000000 gpos50 +band hs6 q15 q15 88000000 93100000 gneg +band hs6 q16.1 q16.1 93100000 99500000 gpos100 +band hs6 q16.2 q16.2 99500000 100600000 gneg +band hs6 q16.3 q16.3 100600000 105500000 gpos100 +band hs6 q21 q21 105500000 114700000 gneg +band hs6 q22.1 q22.1 114700000 118300000 gpos75 +band hs6 q22.2 q22.2 118300000 118500000 gneg +band hs6 q22.31 q22.31 118500000 126000000 gpos100 +band hs6 q22.32 q22.32 126000000 127100000 gneg +band hs6 q22.33 q22.33 127100000 130300000 gpos75 +band hs6 q23.1 q23.1 130300000 131300000 gneg +band hs6 q23.2 q23.2 131300000 135100000 gpos50 +band hs6 q23.3 q23.3 135100000 138600000 gneg +band hs6 q24.1 q24.1 138600000 142500000 gpos75 +band hs6 q24.2 q24.2 142500000 145400000 gneg +band hs6 q24.3 q24.3 145400000 148800000 gpos75 +band hs6 q25.1 q25.1 148800000 152400000 gneg +band hs6 q25.2 q25.2 152400000 155500000 gpos50 +band hs6 q25.3 q25.3 155500000 160900000 gneg +band hs6 q26 q26 160900000 164400000 gpos50 +band hs6 q27 q27 164400000 170914576 gneg +band hs7 p22.3 p22.3 0 2600000 gneg +band hs7 p22.2 p22.2 2600000 4300000 gpos25 +band hs7 p22.1 p22.1 4300000 6900000 gneg +band hs7 p21.3 p21.3 6900000 13500000 gpos100 +band hs7 p21.2 p21.2 13500000 16200000 gneg +band hs7 p21.1 p21.1 16200000 20600000 gpos100 +band hs7 p15.3 p15.3 20600000 25300000 gneg +band hs7 p15.2 p15.2 25300000 27700000 gpos50 +band hs7 p15.1 p15.1 27700000 30200000 gneg +band hs7 p14.3 p14.3 30200000 34700000 gpos75 +band hs7 p14.2 p14.2 34700000 37000000 gneg +band hs7 p14.1 p14.1 37000000 43100000 gpos75 +band hs7 p13 p13 43100000 47100000 gneg +band hs7 p12.3 p12.3 47100000 49700000 gpos75 +band hs7 p12.2 p12.2 49700000 50800000 gneg +band hs7 p12.1 p12.1 50800000 53700000 gpos75 +band hs7 p11.2 p11.2 53700000 57600000 gneg +band hs7 p11.1 p11.1 57600000 58900000 acen +band hs7 q11.1 q11.1 58900000 61200000 acen +band hs7 q11.21 q11.21 61200000 66400000 gneg +band hs7 q11.22 q11.22 66400000 71600000 gpos50 +band hs7 q11.23 q11.23 71600000 77100000 gneg +band hs7 q21.11 q21.11 77100000 85900000 gpos100 +band hs7 q21.12 q21.12 85900000 87700000 gneg +band hs7 q21.13 q21.13 87700000 90700000 gpos75 +band hs7 q21.2 q21.2 90700000 92400000 gneg +band hs7 q21.3 q21.3 92400000 97600000 gpos75 +band hs7 q22.1 q22.1 97600000 103400000 gneg +band hs7 q22.2 q22.2 103400000 104100000 gpos50 +band hs7 q22.3 q22.3 104100000 106900000 gneg +band hs7 q31.1 q31.1 106900000 114200000 gpos75 +band hs7 q31.2 q31.2 114200000 116900000 gneg +band hs7 q31.31 q31.31 116900000 120600000 gpos75 +band hs7 q31.32 q31.32 120600000 123300000 gneg +band hs7 q31.33 q31.33 123300000 126600000 gpos75 +band hs7 q32.1 q32.1 126600000 128700000 gneg +band hs7 q32.2 q32.2 128700000 129900000 gpos25 +band hs7 q32.3 q32.3 129900000 132000000 gneg +band hs7 q33 q33 132000000 137600000 gpos50 +band hs7 q34 q34 137600000 142900000 gneg +band hs7 q35 q35 142900000 147300000 gpos75 +band hs7 q36.1 q36.1 147300000 152000000 gneg +band hs7 q36.2 q36.2 152000000 154500000 gpos25 +band hs7 q36.3 q36.3 154500000 158545518 gneg +band hs8 p23.3 p23.3 0 2200000 gneg +band hs8 p23.2 p23.2 2200000 6200000 gpos75 +band hs8 p23.1 p23.1 6200000 12700000 gneg +band hs8 p22 p22 12700000 18700000 gpos100 +band hs8 p21.3 p21.3 18700000 22600000 gneg +band hs8 p21.2 p21.2 22600000 27300000 gpos50 +band hs8 p21.1 p21.1 27300000 28800000 gneg +band hs8 p12 p12 28800000 38400000 gpos75 +band hs8 p11.23 p11.23 38400000 39400000 gneg +band hs8 p11.22 p11.22 39400000 39800000 gpos25 +band hs8 p11.21 p11.21 39800000 43100000 gneg +band hs8 p11.1 p11.1 43100000 45100000 acen +band hs8 q11.1 q11.1 45100000 48000000 acen +band hs8 q11.21 q11.21 48000000 52200000 gneg +band hs8 q11.22 q11.22 52200000 52700000 gpos75 +band hs8 q11.23 q11.23 52700000 55500000 gneg +band hs8 q12.1 q12.1 55500000 61600000 gpos50 +band hs8 q12.2 q12.2 61600000 62200000 gneg +band hs8 q12.3 q12.3 62200000 66000000 gpos50 +band hs8 q13.1 q13.1 66000000 67400000 gneg +band hs8 q13.2 q13.2 67400000 69400000 gpos50 +band hs8 q13.3 q13.3 69400000 72400000 gneg +band hs8 q21.11 q21.11 72400000 75600000 gpos100 +band hs8 q21.12 q21.12 75600000 75700000 gneg +band hs8 q21.13 q21.13 75700000 84500000 gpos75 +band hs8 q21.2 q21.2 84500000 86900000 gneg +band hs8 q21.3 q21.3 86900000 93300000 gpos100 +band hs8 q22.1 q22.1 93300000 99000000 gneg +band hs8 q22.2 q22.2 99000000 101500000 gpos25 +band hs8 q22.3 q22.3 101500000 106100000 gneg +band hs8 q23.1 q23.1 106100000 110500000 gpos75 +band hs8 q23.2 q23.2 110500000 112000000 gneg +band hs8 q23.3 q23.3 112000000 117600000 gpos100 +band hs8 q24.11 q24.11 117600000 119100000 gneg +band hs8 q24.12 q24.12 119100000 122400000 gpos50 +band hs8 q24.13 q24.13 122400000 127200000 gneg +band hs8 q24.21 q24.21 127200000 131400000 gpos50 +band hs8 q24.22 q24.22 131400000 136400000 gneg +band hs8 q24.23 q24.23 136400000 139900000 gpos75 +band hs8 q24.3 q24.3 139900000 146308819 gneg +band hs9 p24.3 p24.3 0 2200000 gneg +band hs9 p24.2 p24.2 2200000 4600000 gpos25 +band hs9 p24.1 p24.1 4600000 9000000 gneg +band hs9 p23 p23 9000000 14100000 gpos75 +band hs9 p22.3 p22.3 14100000 16500000 gneg +band hs9 p22.2 p22.2 16500000 18500000 gpos25 +band hs9 p22.1 p22.1 18500000 19900000 gneg +band hs9 p21.3 p21.3 19900000 25500000 gpos100 +band hs9 p21.2 p21.2 25500000 28100000 gneg +band hs9 p21.1 p21.1 28100000 33200000 gpos100 +band hs9 p13.3 p13.3 33200000 36300000 gneg +band hs9 p13.2 p13.2 36300000 37900000 gpos25 +band hs9 p13.1 p13.1 37900000 39700000 gneg +band hs9 p12 p12 39700000 41400000 gpos50 +band hs9 p11.2 p11.2 41400000 44300000 gneg +band hs9 p11.1 p11.1 44300000 49000000 acen +band hs9 q11 q11 49000000 57600000 acen +band hs9 q12 q12 57600000 62900000 gvar +band hs9 q13 q13 62900000 65800000 gneg +band hs9 q21.11 q21.11 65800000 69400000 gpos25 +band hs9 q21.12 q21.12 69400000 71200000 gneg +band hs9 q21.13 q21.13 71200000 74700000 gpos50 +band hs9 q21.2 q21.2 74700000 76500000 gneg +band hs9 q21.31 q21.31 76500000 79600000 gpos50 +band hs9 q21.32 q21.32 79600000 82400000 gneg +band hs9 q21.33 q21.33 82400000 85800000 gpos50 +band hs9 q22.1 q22.1 85800000 87300000 gneg +band hs9 q22.2 q22.2 87300000 89300000 gpos25 +band hs9 q22.31 q22.31 89300000 92100000 gneg +band hs9 q22.32 q22.32 92100000 94900000 gpos25 +band hs9 q22.33 q22.33 94900000 98300000 gneg +band hs9 q31.1 q31.1 98300000 103800000 gpos100 +band hs9 q31.2 q31.2 103800000 106800000 gneg +band hs9 q31.3 q31.3 106800000 110300000 gpos25 +band hs9 q32 q32 110300000 113100000 gneg +band hs9 q33.1 q33.1 113100000 117900000 gpos75 +band hs9 q33.2 q33.2 117900000 121200000 gneg +band hs9 q33.3 q33.3 121200000 125600000 gpos25 +band hs9 q34.11 q34.11 125600000 128800000 gneg +band hs9 q34.12 q34.12 128800000 129100000 gpos25 +band hs9 q34.13 q34.13 129100000 131200000 gneg +band hs9 q34.2 q34.2 131200000 132900000 gpos25 +band hs9 q34.3 q34.3 132900000 136372045 gneg +band hsX p22.33 p22.33 0 4000000 gneg +band hsX p22.32 p22.32 4000000 5400000 gpos50 +band hsX p22.31 p22.31 5400000 8900000 gneg +band hsX p22.22 p22.22 8900000 16800000 gpos50 +band hsX p22.13 p22.13 16800000 18600000 gneg +band hsX p22.12 p22.12 18600000 21300000 gpos50 +band hsX p22.11 p22.11 21300000 24400000 gneg +band hsX p21.3 p21.3 24400000 28800000 gpos100 +band hsX p21.2 p21.2 28800000 30900000 gneg +band hsX p21.1 p21.1 30900000 36700000 gpos100 +band hsX p11.4 p11.4 36700000 41400000 gneg +band hsX p11.3 p11.3 41400000 46500000 gpos75 +band hsX p11.23 p11.23 46500000 48800000 gneg +band hsX p11.22 p11.22 48800000 53600000 gpos25 +band hsX p11.21 p11.21 53600000 55600000 gneg +band hsX p11.1 p11.1 55600000 58500000 acen +band hsX q11.1 q11.1 58500000 60600000 acen +band hsX q11.2 q11.2 60600000 63100000 gneg +band hsX q12 q12 63100000 66600000 gpos50 +band hsX q13.1 q13.1 66600000 71100000 gneg +band hsX q13.2 q13.2 71100000 72800000 gpos50 +band hsX q13.3 q13.3 72800000 74900000 gneg +band hsX q21.1 q21.1 74900000 83400000 gpos100 +band hsX q21.2 q21.2 83400000 85100000 gneg +band hsX q21.31 q21.31 85100000 90800000 gpos100 +band hsX q21.32 q21.32 90800000 92500000 gneg +band hsX q21.33 q21.33 92500000 97100000 gpos75 +band hsX q22.1 q22.1 97100000 101400000 gneg +band hsX q22.2 q22.2 101400000 102500000 gpos50 +band hsX q22.3 q22.3 102500000 107400000 gneg +band hsX q23 q23 107400000 115300000 gpos75 +band hsX q24 q24 115300000 119600000 gneg +band hsX q25 q25 119600000 127400000 gpos100 +band hsX q26.1 q26.1 127400000 129100000 gneg +band hsX q26.2 q26.2 129100000 132400000 gpos25 +band hsX q26.3 q26.3 132400000 136700000 gneg +band hsX q27.1 q27.1 136700000 139000000 gpos75 +band hsX q27.2 q27.2 139000000 140700000 gneg +band hsX q27.3 q27.3 140700000 145800000 gpos100 +band hsX q28 q28 145800000 153692391 gneg +band hsY p11.32 p11.32 0 1300000 gneg +band hsY p11.31 p11.31 1300000 2600000 gpos50 +band hsY p11.2 p11.2 2600000 9700000 gneg +band hsY p11.1 p11.1 9700000 10700000 acen +band hsY q11.1 q11.1 10700000 12800000 acen +band hsY q11.21 q11.21 12800000 14800000 gneg +band hsY q11.221 q11.221 14800000 19300000 gpos50 +band hsY q11.222 q11.222 19300000 21800000 gneg +band hsY q11.223 q11.223 21800000 25800000 gpos50 +band hsY q11.23 q11.23 25800000 27700000 gneg +band hsY q12 q12 27700000 50286555 gvar diff -r a64dc31ab7f2 -r 740057a5126d karyotype/karyotype.human.hg17.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/karyotype/karyotype.human.hg17.txt Fri May 01 07:28:50 2020 -0400 @@ -0,0 +1,886 @@ +chr - hsx x 0 154824264 chrx +chr - hsY y 0 57701691 chry +chr - hs1 1 0 245522847 chr1 +chr - hs2 2 0 243018229 chr2 +chr - hs3 3 0 199505740 chr3 +chr - hs4 4 0 191411218 chr4 +chr - hs5 5 0 180857866 chr5 +chr - hs6 6 0 170975699 chr6 +chr - hs7 7 0 158628139 chr7 +chr - hs8 8 0 146274826 chr8 +chr - hs9 9 0 138429268 chr9 +chr - hs10 10 0 135413628 chr10 +chr - hs11 11 0 134452384 chr11 +chr - hs12 12 0 132449811 chr12 +chr - hs13 13 0 114142980 chr13 +chr - hs14 14 0 106368585 chr14 +chr - hs15 15 0 100338915 chr15 +chr - hs16 16 0 88827254 chr16 +chr - hs17 17 0 78774742 chr17 +chr - hs18 18 0 76117153 chr18 +chr - hs19 19 0 63811651 chr19 +chr - hs20 20 0 62435964 chr20 +chr - hs21 21 0 46944323 chr21 +chr - hs22 22 0 49554710 chr22 +band hs1 p36.33 p36.33 0 2300000 gneg +band hs1 p36.32 p36.32 2300000 5300000 gpos25 +band hs1 p36.31 p36.31 5300000 7100000 gneg +band hs1 p36.23 p36.23 7100000 9000000 gpos25 +band hs1 p36.22 p36.22 9000000 12300000 gneg +band hs1 p36.21 p36.21 12300000 15600000 gpos50 +band hs1 p36.13 p36.13 15600000 20200000 gneg +band hs1 p36.12 p36.12 20200000 23700000 gpos25 +band hs1 p36.11 p36.11 23700000 27700000 gneg +band hs1 p35.3 p35.3 27700000 30000000 gpos25 +band hs1 p35.2 p35.2 30000000 32100000 gneg +band hs1 p35.1 p35.1 32100000 34300000 gpos25 +band hs1 p34.3 p34.3 34300000 39800000 gneg +band hs1 p34.2 p34.2 39800000 43800000 gpos25 +band hs1 p34.1 p34.1 43800000 46500000 gneg +band hs1 p33 p33 46500000 50400000 gpos75 +band hs1 p32.3 p32.3 50400000 55800000 gneg +band hs1 p32.2 p32.2 55800000 58700000 gpos50 +band hs1 p32.1 p32.1 58700000 60100000 gneg +band hs1 p31.3 p31.3 60100000 65500000 gpos50 +band hs1 p31.2 p31.2 65500000 69500000 gneg +band hs1 p31.1 p31.1 69500000 84600000 gpos100 +band hs1 p22.3 p22.3 84600000 88100000 gneg +band hs1 p22.2 p22.2 88100000 91700000 gpos75 +band hs1 p22.1 p22.1 91700000 94500000 gneg +band hs1 p21.3 p21.3 94500000 99500000 gpos75 +band hs1 p21.2 p21.2 99500000 102000000 gneg +band hs1 p21.1 p21.1 102000000 106900000 gpos100 +band hs1 p13.3 p13.3 106900000 111500000 gneg +band hs1 p13.2 p13.2 111500000 114900000 gpos50 +band hs1 p13.1 p13.1 114900000 117500000 gneg +band hs1 p12 p12 117500000 120300000 gpos50 +band hs1 p11.2 p11.2 120300000 121000000 gneg +band hs1 p11.1 p11.1 121000000 124200000 acen +band hs1 q11 q11 124200000 127900000 acen +band hs1 q12 q12 127900000 141600000 gvar +band hs1 q21.1 q21.1 141600000 146500000 gneg +band hs1 q21.2 q21.2 146500000 148100000 gpos50 +band hs1 q21.3 q21.3 148100000 151400000 gneg +band hs1 q22 q22 151400000 153400000 gpos50 +band hs1 q23.1 q23.1 153400000 155900000 gneg +band hs1 q23.2 q23.2 155900000 157300000 gpos50 +band hs1 q23.3 q23.3 157300000 162300000 gneg +band hs1 q24.1 q24.1 162300000 163900000 gpos50 +band hs1 q24.2 q24.2 163900000 167600000 gneg +band hs1 q24.3 q24.3 167600000 169700000 gpos75 +band hs1 q25.1 q25.1 169700000 172800000 gneg +band hs1 q25.2 q25.2 172800000 177000000 gpos50 +band hs1 q25.3 q25.3 177000000 182500000 gneg +band hs1 q31.1 q31.1 182500000 187500000 gpos100 +band hs1 q31.2 q31.2 187500000 190500000 gneg +band hs1 q31.3 q31.3 190500000 196000000 gpos100 +band hs1 q32.1 q32.1 196000000 203600000 gneg +band hs1 q32.2 q32.2 203600000 207800000 gpos25 +band hs1 q32.3 q32.3 207800000 210500000 gneg +band hs1 q41 q41 210500000 219800000 gpos100 +band hs1 q42.11 q42.11 219800000 220600000 gneg +band hs1 q42.12 q42.12 220600000 223300000 gpos25 +band hs1 q42.13 q42.13 223300000 227000000 gneg +band hs1 q42.2 q42.2 227000000 231000000 gpos50 +band hs1 q42.3 q42.3 231000000 232900000 gneg +band hs1 q43 q43 232900000 239500000 gpos75 +band hs1 q44 q44 239500000 245522847 gneg +band hs10 p15.3 p15.3 0 3000000 gneg +band hs10 p15.2 p15.2 3000000 3800000 gpos25 +band hs10 p15.1 p15.1 3800000 6700000 gneg +band hs10 p14 p14 6700000 12300000 gpos75 +band hs10 p13 p13 12300000 17300000 gneg +band hs10 p12.33 p12.33 17300000 18600000 gpos75 +band hs10 p12.32 p12.32 18600000 18700000 gneg +band hs10 p12.31 p12.31 18700000 22600000 gpos75 +band hs10 p12.2 p12.2 22600000 24600000 gneg +band hs10 p12.1 p12.1 24600000 29400000 gpos50 +band hs10 p11.23 p11.23 29400000 31400000 gneg +band hs10 p11.22 p11.22 31400000 34500000 gpos25 +band hs10 p11.21 p11.21 34500000 38800000 gneg +band hs10 p11.1 p11.1 38800000 40300000 acen +band hs10 q11.1 q11.1 40300000 41900000 acen +band hs10 q11.21 q11.21 41900000 45700000 gneg +band hs10 q11.22 q11.22 45700000 49500000 gpos25 +band hs10 q11.23 q11.23 49500000 52600000 gneg +band hs10 q21.1 q21.1 52600000 60800000 gpos100 +band hs10 q21.2 q21.2 60800000 64200000 gneg +band hs10 q21.3 q21.3 64200000 70300000 gpos100 +band hs10 q22.1 q22.1 70300000 74600000 gneg +band hs10 q22.2 q22.2 74600000 77700000 gpos50 +band hs10 q22.3 q22.3 77700000 82900000 gneg +band hs10 q23.1 q23.1 82900000 86800000 gpos100 +band hs10 q23.2 q23.2 86800000 89100000 gneg +band hs10 q23.31 q23.31 89100000 92900000 gpos75 +band hs10 q23.32 q23.32 92900000 94100000 gneg +band hs10 q23.33 q23.33 94100000 97000000 gpos50 +band hs10 q24.1 q24.1 97000000 99300000 gneg +band hs10 q24.2 q24.2 99300000 101900000 gpos50 +band hs10 q24.31 q24.31 101900000 102900000 gneg +band hs10 q24.32 q24.32 102900000 104800000 gpos25 +band hs10 q24.33 q24.33 104800000 105700000 gneg +band hs10 q25.1 q25.1 105700000 111800000 gpos100 +band hs10 q25.2 q25.2 111800000 114900000 gneg +band hs10 q25.3 q25.3 114900000 118700000 gpos75 +band hs10 q26.11 q26.11 118700000 121500000 gneg +band hs10 q26.12 q26.12 121500000 123100000 gpos50 +band hs10 q26.13 q26.13 123100000 127400000 gneg +band hs10 q26.2 q26.2 127400000 130500000 gpos50 +band hs10 q26.3 q26.3 130500000 135413628 gneg +band hs11 p15.5 p15.5 0 2800000 gneg +band hs11 p15.4 p15.4 2800000 10700000 gpos50 +band hs11 p15.3 p15.3 10700000 12600000 gneg +band hs11 p15.2 p15.2 12600000 16100000 gpos50 +band hs11 p15.1 p15.1 16100000 21600000 gneg +band hs11 p14.3 p14.3 21600000 26000000 gpos100 +band hs11 p14.2 p14.2 26000000 27200000 gneg +band hs11 p14.1 p14.1 27200000 31000000 gpos75 +band hs11 p13 p13 31000000 36400000 gneg +band hs11 p12 p12 36400000 43400000 gpos100 +band hs11 p11.2 p11.2 43400000 48800000 gneg +band hs11 p11.12 p11.12 48800000 51400000 gpos75 +band hs11 p11.11 p11.11 51400000 52900000 acen +band hs11 q11 q11 52900000 56700000 acen +band hs11 q12.1 q12.1 56700000 59800000 gpos75 +band hs11 q12.2 q12.2 59800000 61500000 gneg +band hs11 q12.3 q12.3 61500000 63100000 gpos25 +band hs11 q13.1 q13.1 63100000 65600000 gneg +band hs11 q13.2 q13.2 65600000 68300000 gpos25 +band hs11 q13.3 q13.3 68300000 70000000 gneg +band hs11 q13.4 q13.4 70000000 74900000 gpos50 +band hs11 q13.5 q13.5 74900000 77400000 gneg +band hs11 q14.1 q14.1 77400000 85300000 gpos100 +band hs11 q14.2 q14.2 85300000 87800000 gneg +band hs11 q14.3 q14.3 87800000 92100000 gpos100 +band hs11 q21 q21 92100000 96400000 gneg +band hs11 q22.1 q22.1 96400000 101200000 gpos100 +band hs11 q22.2 q22.2 101200000 102400000 gneg +band hs11 q22.3 q22.3 102400000 110000000 gpos100 +band hs11 q23.1 q23.1 110000000 112700000 gneg +band hs11 q23.2 q23.2 112700000 114400000 gpos50 +band hs11 q23.3 q23.3 114400000 121200000 gneg +band hs11 q24.1 q24.1 121200000 123800000 gpos50 +band hs11 q24.2 q24.2 123800000 127500000 gneg +band hs11 q24.3 q24.3 127500000 130300000 gpos50 +band hs11 q25 q25 130300000 134452384 gneg +band hs12 p13.33 p13.33 0 3100000 gneg +band hs12 p13.32 p13.32 3100000 5300000 gpos25 +band hs12 p13.31 p13.31 5300000 10100000 gneg +band hs12 p13.2 p13.2 10100000 12900000 gpos75 +band hs12 p13.1 p13.1 12900000 14700000 gneg +band hs12 p12.3 p12.3 14700000 19900000 gpos100 +band hs12 p12.2 p12.2 19900000 21200000 gneg +band hs12 p12.1 p12.1 21200000 26400000 gpos100 +band hs12 p11.23 p11.23 26400000 27700000 gneg +band hs12 p11.22 p11.22 27700000 30600000 gpos50 +band hs12 p11.21 p11.21 30600000 33200000 gneg +band hs12 p11.1 p11.1 33200000 35400000 acen +band hs12 q11 q11 35400000 36500000 acen +band hs12 q12 q12 36500000 44600000 gpos100 +band hs12 q13.11 q13.11 44600000 47400000 gneg +band hs12 q13.12 q13.12 47400000 49800000 gpos25 +band hs12 q13.13 q13.13 49800000 53100000 gneg +band hs12 q13.2 q13.2 53100000 54900000 gpos25 +band hs12 q13.3 q13.3 54900000 56300000 gneg +band hs12 q14.1 q14.1 56300000 61400000 gpos75 +band hs12 q14.2 q14.2 61400000 63400000 gneg +band hs12 q14.3 q14.3 63400000 66100000 gpos50 +band hs12 q15 q15 66100000 70100000 gneg +band hs12 q21.1 q21.1 70100000 74300000 gpos75 +band hs12 q21.2 q21.2 74300000 78900000 gneg +band hs12 q21.31 q21.31 78900000 85200000 gpos100 +band hs12 q21.32 q21.32 85200000 87500000 gneg +band hs12 q21.33 q21.33 87500000 91200000 gpos100 +band hs12 q22 q22 91200000 94700000 gneg +band hs12 q23.1 q23.1 94700000 100100000 gpos75 +band hs12 q23.2 q23.2 100100000 102400000 gneg +band hs12 q23.3 q23.3 102400000 107500000 gpos50 +band hs12 q24.11 q24.11 107500000 110200000 gneg +band hs12 q24.12 q24.12 110200000 110800000 gpos25 +band hs12 q24.13 q24.13 110800000 112800000 gneg +band hs12 q24.21 q24.21 112800000 115300000 gpos50 +band hs12 q24.22 q24.22 115300000 116600000 gneg +band hs12 q24.23 q24.23 116600000 119300000 gpos50 +band hs12 q24.31 q24.31 119300000 125400000 gneg +band hs12 q24.32 q24.32 125400000 128300000 gpos50 +band hs12 q24.33 q24.33 128300000 132449811 gneg +band hs13 p13 p13 0 3800000 gvar +band hs13 p12 p12 3800000 8300000 stalk +band hs13 p11.2 p11.2 8300000 13500000 gvar +band hs13 p11.1 p11.1 13500000 16000000 acen +band hs13 q11 q11 16000000 18400000 acen +band hs13 q12.11 q12.11 18400000 22200000 gneg +band hs13 q12.12 q12.12 22200000 24400000 gpos25 +band hs13 q12.13 q12.13 24400000 26600000 gneg +band hs13 q12.2 q12.2 26600000 27800000 gpos25 +band hs13 q12.3 q12.3 27800000 31100000 gneg +band hs13 q13.1 q13.1 31100000 32900000 gpos50 +band hs13 q13.2 q13.2 32900000 34500000 gneg +band hs13 q13.3 q13.3 34500000 39000000 gpos75 +band hs13 q14.11 q14.11 39000000 44100000 gneg +band hs13 q14.12 q14.12 44100000 44700000 gpos25 +band hs13 q14.13 q14.13 44700000 46200000 gneg +band hs13 q14.2 q14.2 46200000 49800000 gpos50 +band hs13 q14.3 q14.3 49800000 54200000 gneg +band hs13 q21.1 q21.1 54200000 58500000 gpos100 +band hs13 q21.2 q21.2 58500000 61200000 gneg +band hs13 q21.31 q21.31 61200000 64600000 gpos75 +band hs13 q21.32 q21.32 64600000 67500000 gneg +band hs13 q21.33 q21.33 67500000 72100000 gpos100 +band hs13 q22.1 q22.1 72100000 74200000 gneg +band hs13 q22.2 q22.2 74200000 76100000 gpos50 +band hs13 q22.3 q22.3 76100000 77900000 gneg +band hs13 q31.1 q31.1 77900000 86500000 gpos100 +band hs13 q31.2 q31.2 86500000 88800000 gneg +band hs13 q31.3 q31.3 88800000 93800000 gpos100 +band hs13 q32.1 q32.1 93800000 97000000 gneg +band hs13 q32.2 q32.2 97000000 98200000 gpos25 +band hs13 q32.3 q32.3 98200000 100500000 gneg +band hs13 q33.1 q33.1 100500000 103700000 gpos100 +band hs13 q33.2 q33.2 103700000 105800000 gneg +band hs13 q33.3 q33.3 105800000 109100000 gpos100 +band hs13 q34 q34 109100000 114142980 gneg +band hs14 p13 p13 0 3100000 gvar +band hs14 p12 p12 3100000 6700000 stalk +band hs14 p11.2 p11.2 6700000 13600000 gvar +band hs14 p11.1 p11.1 13600000 15600000 acen +band hs14 q11.1 q11.1 15600000 19000000 acen +band hs14 q11.2 q11.2 19000000 24300000 gneg +band hs14 q12 q12 24300000 32400000 gpos100 +band hs14 q13.1 q13.1 32400000 34400000 gneg +band hs14 q13.2 q13.2 34400000 35600000 gpos50 +band hs14 q13.3 q13.3 35600000 36900000 gneg +band hs14 q21.1 q21.1 36900000 42600000 gpos100 +band hs14 q21.2 q21.2 42600000 46300000 gneg +band hs14 q21.3 q21.3 46300000 50100000 gpos100 +band hs14 q22.1 q22.1 50100000 53300000 gneg +band hs14 q22.2 q22.2 53300000 54600000 gpos25 +band hs14 q22.3 q22.3 54600000 57200000 gneg +band hs14 q23.1 q23.1 57200000 61200000 gpos75 +band hs14 q23.2 q23.2 61200000 64000000 gneg +band hs14 q23.3 q23.3 64000000 67000000 gpos50 +band hs14 q24.1 q24.1 67000000 69300000 gneg +band hs14 q24.2 q24.2 69300000 72900000 gpos50 +band hs14 q24.3 q24.3 72900000 78400000 gneg +band hs14 q31.1 q31.1 78400000 82300000 gpos100 +band hs14 q31.2 q31.2 82300000 83400000 gneg +band hs14 q31.3 q31.3 83400000 88100000 gpos100 +band hs14 q32.11 q32.11 88100000 90000000 gneg +band hs14 q32.12 q32.12 90000000 92600000 gpos25 +band hs14 q32.13 q32.13 92600000 95400000 gneg +band hs14 q32.2 q32.2 95400000 100400000 gpos50 +band hs14 q32.31 q32.31 100400000 101500000 gneg +band hs14 q32.32 q32.32 101500000 103100000 gpos50 +band hs14 q32.33 q32.33 103100000 106368585 gneg +band hs15 p13 p13 0 3500000 gvar +band hs15 p12 p12 3500000 7900000 stalk +band hs15 p11.2 p11.2 7900000 14100000 gvar +band hs15 p11.1 p11.1 14100000 17000000 acen +band hs15 q11.1 q11.1 17000000 18300000 acen +band hs15 q11.2 q11.2 18300000 23200000 gneg +band hs15 q12 q12 23200000 25700000 gpos50 +band hs15 q13.1 q13.1 25700000 28000000 gneg +band hs15 q13.2 q13.2 28000000 29000000 gpos50 +band hs15 q13.3 q13.3 29000000 31400000 gneg +band hs15 q14 q14 31400000 37900000 gpos75 +band hs15 q15.1 q15.1 37900000 40700000 gneg +band hs15 q15.2 q15.2 40700000 41400000 gpos25 +band hs15 q15.3 q15.3 41400000 42600000 gneg +band hs15 q21.1 q21.1 42600000 47500000 gpos75 +band hs15 q21.2 q21.2 47500000 50700000 gneg +band hs15 q21.3 q21.3 50700000 57000000 gpos75 +band hs15 q22.1 q22.1 57000000 57100000 gneg +band hs15 q22.2 q22.2 57100000 61500000 gpos25 +band hs15 q22.31 q22.31 61500000 64900000 gneg +band hs15 q22.32 q22.32 64900000 65000000 gpos25 +band hs15 q22.33 q22.33 65000000 65300000 gneg +band hs15 q23 q23 65300000 70400000 gpos25 +band hs15 q24.1 q24.1 70400000 73100000 gneg +band hs15 q24.2 q24.2 73100000 74400000 gpos25 +band hs15 q24.3 q24.3 74400000 76100000 gneg +band hs15 q25.1 q25.1 76100000 79500000 gpos50 +band hs15 q25.2 q25.2 79500000 83000000 gneg +band hs15 q25.3 q25.3 83000000 86900000 gpos50 +band hs15 q26.1 q26.1 86900000 92100000 gneg +band hs15 q26.2 q26.2 92100000 96300000 gpos50 +band hs15 q26.3 q26.3 96300000 100338915 gneg +band hs16 p13.3 p13.3 0 6300000 gneg +band hs16 p13.2 p13.2 6300000 10300000 gpos50 +band hs16 p13.13 p13.13 10300000 12500000 gneg +band hs16 p13.12 p13.12 12500000 14700000 gpos50 +band hs16 p13.11 p13.11 14700000 16700000 gneg +band hs16 p12.3 p12.3 16700000 21100000 gpos50 +band hs16 p12.2 p12.2 21100000 21700000 gneg +band hs16 p12.1 p12.1 21700000 27600000 gpos50 +band hs16 p11.2 p11.2 27600000 34400000 gneg +band hs16 p11.1 p11.1 34400000 38200000 acen +band hs16 q11.1 q11.1 38200000 40700000 acen +band hs16 q11.2 q11.2 40700000 45500000 gvar +band hs16 q12.1 q12.1 45500000 51200000 gneg +band hs16 q12.2 q12.2 51200000 55300000 gpos50 +band hs16 q13 q13 55300000 56700000 gneg +band hs16 q21 q21 56700000 63900000 gpos100 +band hs16 q22.1 q22.1 63900000 69400000 gneg +band hs16 q22.2 q22.2 69400000 71400000 gpos50 +band hs16 q22.3 q22.3 71400000 73800000 gneg +band hs16 q23.1 q23.1 73800000 78500000 gpos75 +band hs16 q23.2 q23.2 78500000 80600000 gneg +band hs16 q23.3 q23.3 80600000 82700000 gpos50 +band hs16 q24.1 q24.1 82700000 85600000 gneg +band hs16 q24.2 q24.2 85600000 87200000 gpos25 +band hs16 q24.3 q24.3 87200000 88827254 gneg +band hs17 p13.3 p13.3 0 3200000 gneg +band hs17 p13.2 p13.2 3200000 6400000 gpos50 +band hs17 p13.1 p13.1 6400000 10700000 gneg +band hs17 p12 p12 10700000 15900000 gpos75 +band hs17 p11.2 p11.2 15900000 22100000 gneg +band hs17 p11.1 p11.1 22100000 22200000 acen +band hs17 q11.1 q11.1 22200000 22800000 acen +band hs17 q11.2 q11.2 22800000 28800000 gneg +band hs17 q12 q12 28800000 35200000 gpos50 +band hs17 q21.1 q21.1 35200000 35600000 gneg +band hs17 q21.2 q21.2 35600000 38200000 gpos25 +band hs17 q21.31 q21.31 38200000 42300000 gneg +band hs17 q21.32 q21.32 42300000 44900000 gpos25 +band hs17 q21.33 q21.33 44900000 47500000 gneg +band hs17 q22 q22 47500000 50900000 gpos75 +band hs17 q23.1 q23.1 50900000 51200000 gneg +band hs17 q23.2 q23.2 51200000 57500000 gpos75 +band hs17 q23.3 q23.3 57500000 59900000 gneg +band hs17 q24.1 q24.1 59900000 61600000 gpos50 +band hs17 q24.2 q24.2 61600000 64600000 gneg +band hs17 q24.3 q24.3 64600000 68400000 gpos75 +band hs17 q25.1 q25.1 68400000 72300000 gneg +band hs17 q25.2 q25.2 72300000 72900000 gpos25 +band hs17 q25.3 q25.3 72900000 78774742 gneg +band hs18 p11.32 p11.32 0 2900000 gneg +band hs18 p11.31 p11.31 2900000 7200000 gpos50 +band hs18 p11.23 p11.23 7200000 8500000 gneg +band hs18 p11.22 p11.22 8500000 10900000 gpos25 +band hs18 p11.21 p11.21 10900000 15400000 gneg +band hs18 p11.1 p11.1 15400000 16100000 acen +band hs18 q11.1 q11.1 16100000 17300000 acen +band hs18 q11.2 q11.2 17300000 23300000 gneg +band hs18 q12.1 q12.1 23300000 31000000 gpos100 +band hs18 q12.2 q12.2 31000000 35500000 gneg +band hs18 q12.3 q12.3 35500000 41800000 gpos75 +band hs18 q21.1 q21.1 41800000 48500000 gneg +band hs18 q21.2 q21.2 48500000 52500000 gpos75 +band hs18 q21.31 q21.31 52500000 54600000 gneg +band hs18 q21.32 q21.32 54600000 57100000 gpos50 +band hs18 q21.33 q21.33 57100000 59800000 gneg +band hs18 q22.1 q22.1 59800000 64900000 gpos100 +band hs18 q22.2 q22.2 64900000 66900000 gneg +band hs18 q22.3 q22.3 66900000 71300000 gpos25 +band hs18 q23 q23 71300000 76117153 gneg +band hs19 p13.3 p13.3 0 6900000 gneg +band hs19 p13.2 p13.2 6900000 12600000 gpos25 +band hs19 p13.13 p13.13 12600000 13800000 gneg +band hs19 p13.12 p13.12 13800000 16100000 gpos25 +band hs19 p13.11 p13.11 16100000 19800000 gneg +band hs19 p12 p12 19800000 26700000 gvar +band hs19 p11 p11 26700000 28500000 acen +band hs19 q11 q11 28500000 30200000 acen +band hs19 q12 q12 30200000 37100000 gvar +band hs19 q13.11 q13.11 37100000 40300000 gneg +band hs19 q13.12 q13.12 40300000 43000000 gpos25 +band hs19 q13.13 q13.13 43000000 43400000 gneg +band hs19 q13.2 q13.2 43400000 48100000 gpos25 +band hs19 q13.31 q13.31 48100000 50200000 gneg +band hs19 q13.32 q13.32 50200000 53800000 gpos25 +band hs19 q13.33 q13.33 53800000 56000000 gneg +band hs19 q13.41 q13.41 56000000 58300000 gpos25 +band hs19 q13.42 q13.42 58300000 61000000 gneg +band hs19 q13.43 q13.43 61000000 63811651 gpos25 +band hs2 p25.3 p25.3 0 3800000 gneg +band hs2 p25.2 p25.2 3800000 7000000 gpos50 +band hs2 p25.1 p25.1 7000000 12100000 gneg +band hs2 p24.3 p24.3 12100000 16700000 gpos75 +band hs2 p24.2 p24.2 16700000 19200000 gneg +band hs2 p24.1 p24.1 19200000 24000000 gpos75 +band hs2 p23.3 p23.3 24000000 27800000 gneg +band hs2 p23.2 p23.2 27800000 29900000 gpos25 +band hs2 p23.1 p23.1 29900000 32000000 gneg +band hs2 p22.3 p22.3 32000000 36500000 gpos75 +band hs2 p22.2 p22.2 36500000 38500000 gneg +band hs2 p22.1 p22.1 38500000 41700000 gpos50 +band hs2 p21 p21 41700000 47700000 gneg +band hs2 p16.3 p16.3 47700000 52800000 gpos100 +band hs2 p16.2 p16.2 52800000 54900000 gneg +band hs2 p16.1 p16.1 54900000 61200000 gpos100 +band hs2 p15 p15 61200000 64000000 gneg +band hs2 p14 p14 64000000 68500000 gpos50 +band hs2 p13.3 p13.3 68500000 71400000 gneg +band hs2 p13.2 p13.2 71400000 73500000 gpos50 +band hs2 p13.1 p13.1 73500000 75000000 gneg +band hs2 p12 p12 75000000 83300000 gpos100 +band hs2 p11.2 p11.2 83300000 91000000 gneg +band hs2 p11.1 p11.1 91000000 93400000 acen +band hs2 q11.1 q11.1 93400000 95800000 acen +band hs2 q11.2 q11.2 95800000 102600000 gneg +band hs2 q12.1 q12.1 102600000 105500000 gpos50 +band hs2 q12.2 q12.2 105500000 106900000 gneg +band hs2 q12.3 q12.3 106900000 108700000 gpos25 +band hs2 q13 q13 108700000 113900000 gneg +band hs2 q14.1 q14.1 113900000 118600000 gpos50 +band hs2 q14.2 q14.2 118600000 122100000 gneg +band hs2 q14.3 q14.3 122100000 129600000 gpos50 +band hs2 q21.1 q21.1 129600000 132300000 gneg +band hs2 q21.2 q21.2 132300000 134900000 gpos25 +band hs2 q21.3 q21.3 134900000 137400000 gneg +band hs2 q22.1 q22.1 137400000 142500000 gpos100 +band hs2 q22.2 q22.2 142500000 144000000 gneg +band hs2 q22.3 q22.3 144000000 148500000 gpos100 +band hs2 q23.1 q23.1 148500000 149700000 gneg +band hs2 q23.2 q23.2 149700000 150400000 gpos25 +band hs2 q23.3 q23.3 150400000 154700000 gneg +band hs2 q24.1 q24.1 154700000 159700000 gpos75 +band hs2 q24.2 q24.2 159700000 163600000 gneg +band hs2 q24.3 q24.3 163600000 169600000 gpos75 +band hs2 q31.1 q31.1 169600000 177800000 gneg +band hs2 q31.2 q31.2 177800000 180400000 gpos50 +band hs2 q31.3 q31.3 180400000 182800000 gneg +band hs2 q32.1 q32.1 182800000 189200000 gpos75 +band hs2 q32.2 q32.2 189200000 191800000 gneg +band hs2 q32.3 q32.3 191800000 197300000 gpos75 +band hs2 q33.1 q33.1 197300000 203200000 gneg +band hs2 q33.2 q33.2 203200000 204800000 gpos50 +band hs2 q33.3 q33.3 204800000 208900000 gneg +band hs2 q34 q34 208900000 215200000 gpos100 +band hs2 q35 q35 215200000 221400000 gneg +band hs2 q36.1 q36.1 221400000 225000000 gpos75 +band hs2 q36.2 q36.2 225000000 225900000 gneg +band hs2 q36.3 q36.3 225900000 230800000 gpos100 +band hs2 q37.1 q37.1 230800000 235400000 gneg +band hs2 q37.2 q37.2 235400000 237100000 gpos50 +band hs2 q37.3 q37.3 237100000 243018229 gneg +band hs20 p13 p13 0 5000000 gneg +band hs20 p12.3 p12.3 5000000 9000000 gpos75 +band hs20 p12.2 p12.2 9000000 11900000 gneg +band hs20 p12.1 p12.1 11900000 17800000 gpos75 +band hs20 p11.23 p11.23 17800000 21200000 gneg +band hs20 p11.22 p11.22 21200000 22300000 gpos25 +band hs20 p11.21 p11.21 22300000 25700000 gneg +band hs20 p11.1 p11.1 25700000 27100000 acen +band hs20 q11.1 q11.1 27100000 28400000 acen +band hs20 q11.21 q11.21 28400000 31500000 gneg +band hs20 q11.22 q11.22 31500000 33900000 gpos25 +band hs20 q11.23 q11.23 33900000 37100000 gneg +band hs20 q12 q12 37100000 41100000 gpos75 +band hs20 q13.11 q13.11 41100000 41600000 gneg +band hs20 q13.12 q13.12 41600000 45800000 gpos25 +band hs20 q13.13 q13.13 45800000 49200000 gneg +band hs20 q13.2 q13.2 49200000 53500000 gpos75 +band hs20 q13.31 q13.31 53500000 55300000 gneg +band hs20 q13.32 q13.32 55300000 57600000 gpos50 +band hs20 q13.33 q13.33 57600000 62435964 gneg +band hs21 p13 p13 0 2900000 gvar +band hs21 p12 p12 2900000 6300000 stalk +band hs21 p11.2 p11.2 6300000 10000000 gvar +band hs21 p11.1 p11.1 10000000 12300000 acen +band hs21 q11.1 q11.1 12300000 13200000 acen +band hs21 q11.2 q11.2 13200000 15300000 gneg +band hs21 q21.1 q21.1 15300000 22900000 gpos100 +band hs21 q21.2 q21.2 22900000 25800000 gneg +band hs21 q21.3 q21.3 25800000 30500000 gpos75 +band hs21 q22.11 q22.11 30500000 34700000 gneg +band hs21 q22.12 q22.12 34700000 36700000 gpos50 +band hs21 q22.13 q22.13 36700000 38600000 gneg +band hs21 q22.2 q22.2 38600000 41400000 gpos50 +band hs21 q22.3 q22.3 41400000 46944323 gneg +band hs22 p13 p13 0 3000000 gvar +band hs22 p12 p12 3000000 6600000 stalk +band hs22 p11.2 p11.2 6600000 9600000 gvar +band hs22 p11.1 p11.1 9600000 11800000 acen +band hs22 q11.1 q11.1 11800000 16300000 acen +band hs22 q11.21 q11.21 16300000 20500000 gneg +band hs22 q11.22 q11.22 20500000 21800000 gpos25 +band hs22 q11.23 q11.23 21800000 24300000 gneg +band hs22 q12.1 q12.1 24300000 27900000 gpos50 +band hs22 q12.2 q12.2 27900000 30500000 gneg +band hs22 q12.3 q12.3 30500000 35800000 gpos50 +band hs22 q13.1 q13.1 35800000 39300000 gneg +band hs22 q13.2 q13.2 39300000 42600000 gpos50 +band hs22 q13.31 q13.31 42600000 46800000 gneg +band hs22 q13.32 q13.32 46800000 47800000 gpos50 +band hs22 q13.33 q13.33 47800000 49554710 gneg +band hs3 p26.3 p26.3 0 2700000 gpos50 +band hs3 p26.2 p26.2 2700000 4000000 gneg +band hs3 p26.1 p26.1 4000000 8200000 gpos50 +band hs3 p25.3 p25.3 8200000 11800000 gneg +band hs3 p25.2 p25.2 11800000 13400000 gpos25 +band hs3 p25.1 p25.1 13400000 16400000 gneg +band hs3 p24.3 p24.3 16400000 23800000 gpos100 +band hs3 p24.2 p24.2 23800000 27100000 gneg +band hs3 p24.1 p24.1 27100000 32200000 gpos75 +band hs3 p23 p23 32200000 35000000 gneg +band hs3 p22.3 p22.3 35000000 38200000 gpos50 +band hs3 p22.2 p22.2 38200000 39900000 gneg +band hs3 p22.1 p22.1 39900000 43600000 gpos75 +band hs3 p21.33 p21.33 43600000 44400000 gneg +band hs3 p21.32 p21.32 44400000 44700000 gpos50 +band hs3 p21.31 p21.31 44700000 51400000 gneg +band hs3 p21.2 p21.2 51400000 52300000 gpos25 +band hs3 p21.1 p21.1 52300000 54400000 gneg +band hs3 p14.3 p14.3 54400000 58500000 gpos50 +band hs3 p14.2 p14.2 58500000 63700000 gneg +band hs3 p14.1 p14.1 63700000 69900000 gpos50 +band hs3 p13 p13 69900000 74200000 gneg +band hs3 p12.3 p12.3 74200000 79900000 gpos75 +band hs3 p12.2 p12.2 79900000 83600000 gneg +band hs3 p12.1 p12.1 83600000 87200000 gpos75 +band hs3 p11.2 p11.2 87200000 87900000 gneg +band hs3 p11.1 p11.1 87900000 91700000 acen +band hs3 q11.1 q11.1 91700000 93200000 acen +band hs3 q11.2 q11.2 93200000 99200000 gvar +band hs3 q12.1 q12.1 99200000 101400000 gneg +band hs3 q12.2 q12.2 101400000 102400000 gpos25 +band hs3 q12.3 q12.3 102400000 104300000 gneg +band hs3 q13.11 q13.11 104300000 107700000 gpos75 +band hs3 q13.12 q13.12 107700000 109400000 gneg +band hs3 q13.13 q13.13 109400000 112800000 gpos50 +band hs3 q13.2 q13.2 112800000 115000000 gneg +band hs3 q13.31 q13.31 115000000 118900000 gpos75 +band hs3 q13.32 q13.32 118900000 120500000 gneg +band hs3 q13.33 q13.33 120500000 123300000 gpos75 +band hs3 q21.1 q21.1 123300000 125400000 gneg +band hs3 q21.2 q21.2 125400000 128300000 gpos25 +band hs3 q21.3 q21.3 128300000 132700000 gneg +band hs3 q22.1 q22.1 132700000 136300000 gpos25 +band hs3 q22.2 q22.2 136300000 137400000 gneg +band hs3 q22.3 q22.3 137400000 140400000 gpos25 +band hs3 q23 q23 140400000 144400000 gneg +band hs3 q24 q24 144400000 150400000 gpos100 +band hs3 q25.1 q25.1 150400000 153500000 gneg +band hs3 q25.2 q25.2 153500000 156500000 gpos50 +band hs3 q25.31 q25.31 156500000 158500000 gneg +band hs3 q25.32 q25.32 158500000 160500000 gpos50 +band hs3 q25.33 q25.33 160500000 162200000 gneg +band hs3 q26.1 q26.1 162200000 169300000 gpos100 +band hs3 q26.2 q26.2 169300000 172800000 gneg +band hs3 q26.31 q26.31 172800000 177500000 gpos75 +band hs3 q26.32 q26.32 177500000 180700000 gneg +band hs3 q26.33 q26.33 180700000 184200000 gpos75 +band hs3 q27.1 q27.1 184200000 186000000 gneg +band hs3 q27.2 q27.2 186000000 187500000 gpos25 +band hs3 q27.3 q27.3 187500000 189500000 gneg +band hs3 q28 q28 189500000 194000000 gpos75 +band hs3 q29 q29 194000000 199505740 gneg +band hs4 p16.3 p16.3 0 4600000 gneg +band hs4 p16.2 p16.2 4600000 5900000 gpos25 +band hs4 p16.1 p16.1 5900000 11000000 gneg +band hs4 p15.33 p15.33 11000000 15400000 gpos50 +band hs4 p15.32 p15.32 15400000 18600000 gneg +band hs4 p15.31 p15.31 18600000 22700000 gpos75 +band hs4 p15.2 p15.2 22700000 27900000 gneg +band hs4 p15.1 p15.1 27900000 35600000 gpos100 +band hs4 p14 p14 35600000 41100000 gneg +band hs4 p13 p13 41100000 45800000 gpos50 +band hs4 p12 p12 45800000 48900000 gneg +band hs4 p11 p11 48900000 50900000 acen +band hs4 q11 q11 50900000 53200000 acen +band hs4 q12 q12 53200000 59700000 gneg +band hs4 q13.1 q13.1 59700000 66500000 gpos100 +band hs4 q13.2 q13.2 66500000 70600000 gneg +band hs4 q13.3 q13.3 70600000 76600000 gpos75 +band hs4 q21.1 q21.1 76600000 79200000 gneg +band hs4 q21.21 q21.21 79200000 82700000 gpos50 +band hs4 q21.22 q21.22 82700000 84500000 gneg +band hs4 q21.23 q21.23 84500000 87300000 gpos25 +band hs4 q21.3 q21.3 87300000 88400000 gneg +band hs4 q22.1 q22.1 88400000 93300000 gpos75 +band hs4 q22.2 q22.2 93300000 93500000 gneg +band hs4 q22.3 q22.3 93500000 99200000 gpos75 +band hs4 q23 q23 99200000 101400000 gneg +band hs4 q24 q24 101400000 108000000 gpos50 +band hs4 q25 q25 108000000 114400000 gneg +band hs4 q26 q26 114400000 121100000 gpos75 +band hs4 q27 q27 121100000 124300000 gneg +band hs4 q28.1 q28.1 124300000 129200000 gpos50 +band hs4 q28.2 q28.2 129200000 131500000 gneg +band hs4 q28.3 q28.3 131500000 139800000 gpos100 +band hs4 q31.1 q31.1 139800000 141800000 gneg +band hs4 q31.21 q31.21 141800000 147200000 gpos25 +band hs4 q31.22 q31.22 147200000 148800000 gneg +band hs4 q31.23 q31.23 148800000 152000000 gpos25 +band hs4 q31.3 q31.3 152000000 155900000 gneg +band hs4 q32.1 q32.1 155900000 162100000 gpos100 +band hs4 q32.2 q32.2 162100000 164900000 gneg +band hs4 q32.3 q32.3 164900000 170500000 gpos100 +band hs4 q33 q33 170500000 172300000 gneg +band hs4 q34.1 q34.1 172300000 176700000 gpos75 +band hs4 q34.2 q34.2 176700000 177900000 gneg +band hs4 q34.3 q34.3 177900000 183600000 gpos100 +band hs4 q35.1 q35.1 183600000 187500000 gneg +band hs4 q35.2 q35.2 187500000 191411218 gpos25 +band hs5 p15.33 p15.33 0 4500000 gneg +band hs5 p15.32 p15.32 4500000 6400000 gpos25 +band hs5 p15.31 p15.31 6400000 9900000 gneg +band hs5 p15.2 p15.2 9900000 15100000 gpos50 +band hs5 p15.1 p15.1 15100000 18500000 gneg +band hs5 p14.3 p14.3 18500000 23300000 gpos100 +band hs5 p14.2 p14.2 23300000 24700000 gneg +band hs5 p14.1 p14.1 24700000 29300000 gpos100 +band hs5 p13.3 p13.3 29300000 34400000 gneg +band hs5 p13.2 p13.2 34400000 38500000 gpos25 +band hs5 p13.1 p13.1 38500000 42400000 gneg +band hs5 p12 p12 42400000 45800000 gpos50 +band hs5 p11 p11 45800000 47700000 acen +band hs5 q11.1 q11.1 47700000 50500000 acen +band hs5 q11.2 q11.2 50500000 58900000 gneg +band hs5 q12.1 q12.1 58900000 63000000 gpos75 +band hs5 q12.2 q12.2 63000000 63200000 gneg +band hs5 q12.3 q12.3 63200000 66700000 gpos75 +band hs5 q13.1 q13.1 66700000 68400000 gneg +band hs5 q13.2 q13.2 68400000 73300000 gpos50 +band hs5 q13.3 q13.3 73300000 76900000 gneg +band hs5 q14.1 q14.1 76900000 81400000 gpos50 +band hs5 q14.2 q14.2 81400000 82800000 gneg +band hs5 q14.3 q14.3 82800000 91900000 gpos100 +band hs5 q15 q15 91900000 97300000 gneg +band hs5 q21.1 q21.1 97300000 102800000 gpos100 +band hs5 q21.2 q21.2 102800000 104500000 gneg +band hs5 q21.3 q21.3 104500000 109600000 gpos100 +band hs5 q22.1 q22.1 109600000 111500000 gneg +band hs5 q22.2 q22.2 111500000 113100000 gpos50 +band hs5 q22.3 q22.3 113100000 115200000 gneg +band hs5 q23.1 q23.1 115200000 121500000 gpos100 +band hs5 q23.2 q23.2 121500000 127900000 gneg +band hs5 q23.3 q23.3 127900000 132200000 gpos100 +band hs5 q31.1 q31.1 132200000 137200000 gneg +band hs5 q31.2 q31.2 137200000 139900000 gpos25 +band hs5 q31.3 q31.3 139900000 144500000 gneg +band hs5 q32 q32 144500000 149800000 gpos75 +band hs5 q33.1 q33.1 149800000 152700000 gneg +band hs5 q33.2 q33.2 152700000 155600000 gpos50 +band hs5 q33.3 q33.3 155600000 159900000 gneg +band hs5 q34 q34 159900000 168400000 gpos100 +band hs5 q35.1 q35.1 168400000 172700000 gneg +band hs5 q35.2 q35.2 172700000 176500000 gpos25 +band hs5 q35.3 q35.3 176500000 180857866 gneg +band hs6 p25.3 p25.3 0 2300000 gneg +band hs6 p25.2 p25.2 2300000 4100000 gpos25 +band hs6 p25.1 p25.1 4100000 7000000 gneg +band hs6 p24.3 p24.3 7000000 10600000 gpos50 +band hs6 p24.2 p24.2 10600000 11700000 gneg +band hs6 p24.1 p24.1 11700000 13500000 gpos25 +band hs6 p23 p23 13500000 15300000 gneg +band hs6 p22.3 p22.3 15300000 24100000 gpos75 +band hs6 p22.2 p22.2 24100000 26400000 gneg +band hs6 p22.1 p22.1 26400000 30000000 gpos50 +band hs6 p21.33 p21.33 30000000 32000000 gneg +band hs6 p21.32 p21.32 32000000 33600000 gpos25 +band hs6 p21.31 p21.31 33600000 36800000 gneg +band hs6 p21.2 p21.2 36800000 40600000 gpos25 +band hs6 p21.1 p21.1 40600000 46300000 gneg +band hs6 p12.3 p12.3 46300000 51300000 gpos100 +band hs6 p12.2 p12.2 51300000 52900000 gneg +band hs6 p12.1 p12.1 52900000 57500000 gpos100 +band hs6 p11.2 p11.2 57500000 58800000 gneg +band hs6 p11.1 p11.1 58800000 60500000 acen +band hs6 q11.1 q11.1 60500000 63400000 acen +band hs6 q11.2 q11.2 63400000 63500000 gneg +band hs6 q12 q12 63500000 70000000 gpos100 +band hs6 q13 q13 70000000 75900000 gneg +band hs6 q14.1 q14.1 75900000 83900000 gpos50 +band hs6 q14.2 q14.2 83900000 84700000 gneg +band hs6 q14.3 q14.3 84700000 87500000 gpos50 +band hs6 q15 q15 87500000 92100000 gneg +band hs6 q16.1 q16.1 92100000 98700000 gpos100 +band hs6 q16.2 q16.2 98700000 100000000 gneg +band hs6 q16.3 q16.3 100000000 105100000 gpos100 +band hs6 q21 q21 105100000 114500000 gneg +band hs6 q22.1 q22.1 114500000 118400000 gpos75 +band hs6 q22.2 q22.2 118400000 118600000 gneg +band hs6 q22.31 q22.31 118600000 126100000 gpos100 +band hs6 q22.32 q22.32 126100000 127200000 gneg +band hs6 q22.33 q22.33 127200000 130400000 gpos75 +band hs6 q23.1 q23.1 130400000 131400000 gneg +band hs6 q23.2 q23.2 131400000 135200000 gpos50 +band hs6 q23.3 q23.3 135200000 139100000 gneg +band hs6 q24.1 q24.1 139100000 142900000 gpos75 +band hs6 q24.2 q24.2 142900000 145700000 gneg +band hs6 q24.3 q24.3 145700000 149100000 gpos75 +band hs6 q25.1 q25.1 149100000 152600000 gneg +band hs6 q25.2 q25.2 152600000 155600000 gpos50 +band hs6 q25.3 q25.3 155600000 161000000 gneg +band hs6 q26 q26 161000000 164500000 gpos50 +band hs6 q27 q27 164500000 170975699 gneg +band hs7 p22.3 p22.3 0 2700000 gneg +band hs7 p22.2 p22.2 2700000 4300000 gpos25 +band hs7 p22.1 p22.1 4300000 7000000 gneg +band hs7 p21.3 p21.3 7000000 13100000 gpos100 +band hs7 p21.2 p21.2 13100000 15000000 gneg +band hs7 p21.1 p21.1 15000000 20700000 gpos100 +band hs7 p15.3 p15.3 20700000 25300000 gneg +band hs7 p15.2 p15.2 25300000 27700000 gpos50 +band hs7 p15.1 p15.1 27700000 30300000 gneg +band hs7 p14.3 p14.3 30300000 34700000 gpos75 +band hs7 p14.2 p14.2 34700000 37000000 gneg +band hs7 p14.1 p14.1 37000000 43100000 gpos75 +band hs7 p13 p13 43100000 47100000 gneg +band hs7 p12.3 p12.3 47100000 49800000 gpos75 +band hs7 p12.2 p12.2 49800000 50800000 gneg +band hs7 p12.1 p12.1 50800000 53600000 gpos75 +band hs7 p11.2 p11.2 53600000 56900000 gneg +band hs7 p11.1 p11.1 56900000 58900000 acen +band hs7 q11.1 q11.1 58900000 61200000 acen +band hs7 q11.21 q11.21 61200000 66500000 gneg +band hs7 q11.22 q11.22 66500000 71600000 gpos50 +band hs7 q11.23 q11.23 71600000 77200000 gneg +band hs7 q21.11 q21.11 77200000 85900000 gpos100 +band hs7 q21.12 q21.12 85900000 87700000 gneg +band hs7 q21.13 q21.13 87700000 90700000 gpos75 +band hs7 q21.2 q21.2 90700000 92400000 gneg +band hs7 q21.3 q21.3 92400000 97600000 gpos75 +band hs7 q22.1 q22.1 97600000 103400000 gneg +band hs7 q22.2 q22.2 103400000 104100000 gpos50 +band hs7 q22.3 q22.3 104100000 106900000 gneg +band hs7 q31.1 q31.1 106900000 114200000 gpos75 +band hs7 q31.2 q31.2 114200000 117000000 gneg +band hs7 q31.31 q31.31 117000000 120700000 gpos75 +band hs7 q31.32 q31.32 120700000 123000000 gneg +band hs7 q31.33 q31.33 123000000 125900000 gpos75 +band hs7 q32.1 q32.1 125900000 128800000 gneg +band hs7 q32.2 q32.2 128800000 129900000 gpos25 +band hs7 q32.3 q32.3 129900000 132000000 gneg +band hs7 q33 q33 132000000 137100000 gpos50 +band hs7 q34 q34 137100000 143000000 gneg +band hs7 q35 q35 143000000 147300000 gpos75 +band hs7 q36.1 q36.1 147300000 152000000 gneg +band hs7 q36.2 q36.2 152000000 154500000 gpos25 +band hs7 q36.3 q36.3 154500000 158628139 gneg +band hs8 p23.3 p23.3 0 2200000 gneg +band hs8 p23.2 p23.2 2200000 6200000 gpos75 +band hs8 p23.1 p23.1 6200000 12700000 gneg +band hs8 p22 p22 12700000 19100000 gpos100 +band hs8 p21.3 p21.3 19100000 23400000 gneg +band hs8 p21.2 p21.2 23400000 27400000 gpos50 +band hs8 p21.1 p21.1 27400000 28900000 gneg +band hs8 p12 p12 28900000 38500000 gpos75 +band hs8 p11.23 p11.23 38500000 39500000 gneg +band hs8 p11.22 p11.22 39500000 39900000 gpos25 +band hs8 p11.21 p11.21 39900000 43200000 gneg +band hs8 p11.1 p11.1 43200000 45200000 acen +band hs8 q11.1 q11.1 45200000 48100000 acen +band hs8 q11.21 q11.21 48100000 52400000 gneg +band hs8 q11.22 q11.22 52400000 52800000 gpos75 +band hs8 q11.23 q11.23 52800000 55700000 gneg +band hs8 q12.1 q12.1 55700000 61700000 gpos50 +band hs8 q12.2 q12.2 61700000 62400000 gneg +band hs8 q12.3 q12.3 62400000 66100000 gpos50 +band hs8 q13.1 q13.1 66100000 68100000 gneg +band hs8 q13.2 q13.2 68100000 70700000 gpos50 +band hs8 q13.3 q13.3 70700000 74200000 gneg +band hs8 q21.11 q21.11 74200000 78600000 gpos100 +band hs8 q21.12 q21.12 78600000 80300000 gneg +band hs8 q21.13 q21.13 80300000 84800000 gpos75 +band hs8 q21.2 q21.2 84800000 87000000 gneg +band hs8 q21.3 q21.3 87000000 93400000 gpos100 +band hs8 q22.1 q22.1 93400000 99100000 gneg +band hs8 q22.2 q22.2 99100000 101600000 gpos25 +band hs8 q22.3 q22.3 101600000 106200000 gneg +band hs8 q23.1 q23.1 106200000 110600000 gpos75 +band hs8 q23.2 q23.2 110600000 112200000 gneg +band hs8 q23.3 q23.3 112200000 117700000 gpos100 +band hs8 q24.11 q24.11 117700000 119200000 gneg +band hs8 q24.12 q24.12 119200000 122500000 gpos50 +band hs8 q24.13 q24.13 122500000 127300000 gneg +band hs8 q24.21 q24.21 127300000 131500000 gpos50 +band hs8 q24.22 q24.22 131500000 136500000 gneg +band hs8 q24.23 q24.23 136500000 140000000 gpos75 +band hs8 q24.3 q24.3 140000000 146274826 gneg +band hs9 p24.3 p24.3 0 2200000 gneg +band hs9 p24.2 p24.2 2200000 4600000 gpos25 +band hs9 p24.1 p24.1 4600000 9000000 gneg +band hs9 p23 p23 9000000 14100000 gpos75 +band hs9 p22.3 p22.3 14100000 16600000 gneg +band hs9 p22.2 p22.2 16600000 18500000 gpos25 +band hs9 p22.1 p22.1 18500000 19900000 gneg +band hs9 p21.3 p21.3 19900000 25500000 gpos100 +band hs9 p21.2 p21.2 25500000 28100000 gneg +band hs9 p21.1 p21.1 28100000 33200000 gpos100 +band hs9 p13.3 p13.3 33200000 36200000 gneg +band hs9 p13.2 p13.2 36200000 38600000 gpos25 +band hs9 p13.1 p13.1 38600000 41400000 gneg +band hs9 p12 p12 41400000 44200000 gpos50 +band hs9 p11.2 p11.2 44200000 45900000 gneg +band hs9 p11.1 p11.1 45900000 50600000 acen +band hs9 q11 q11 50600000 59200000 acen +band hs9 q12 q12 59200000 67500000 gvar +band hs9 q13 q13 67500000 68600000 gneg +band hs9 q21.11 q21.11 68600000 70800000 gpos25 +band hs9 q21.12 q21.12 70800000 71200000 gneg +band hs9 q21.13 q21.13 71200000 76400000 gpos50 +band hs9 q21.2 q21.2 76400000 78300000 gneg +band hs9 q21.31 q21.31 78300000 81300000 gpos50 +band hs9 q21.32 q21.32 81300000 84100000 gneg +band hs9 q21.33 q21.33 84100000 87600000 gpos50 +band hs9 q22.1 q22.1 87600000 89000000 gneg +band hs9 q22.2 q22.2 89000000 91000000 gpos25 +band hs9 q22.31 q22.31 91000000 93700000 gneg +band hs9 q22.32 q22.32 93700000 96300000 gpos25 +band hs9 q22.33 q22.33 96300000 99600000 gneg +band hs9 q31.1 q31.1 99600000 105300000 gpos100 +band hs9 q31.2 q31.2 105300000 108400000 gneg +band hs9 q31.3 q31.3 108400000 112000000 gpos25 +band hs9 q32 q32 112000000 114800000 gneg +band hs9 q33.1 q33.1 114800000 119600000 gpos75 +band hs9 q33.2 q33.2 119600000 122900000 gneg +band hs9 q33.3 q33.3 122900000 127300000 gpos25 +band hs9 q34.11 q34.11 127300000 130500000 gneg +band hs9 q34.12 q34.12 130500000 130900000 gpos25 +band hs9 q34.13 q34.13 130900000 133000000 gneg +band hs9 q34.2 q34.2 133000000 134700000 gpos25 +band hs9 q34.3 q34.3 134700000 138429268 gneg +band hsx p22.33 p22.33 0 4200000 gneg +band hsx p22.32 p22.32 4200000 5800000 gpos50 +band hsx p22.31 p22.31 5800000 9300000 gneg +band hsx p22.2 p22.2 9300000 17200000 gpos50 +band hsx p22.13 p22.13 17200000 19000000 gneg +band hsx p22.12 p22.12 19000000 21600000 gpos50 +band hsx p22.11 p22.11 21600000 24700000 gneg +band hsx p21.3 p21.3 24700000 29200000 gpos100 +band hsx p21.2 p21.2 29200000 31300000 gneg +band hsx p21.1 p21.1 31300000 37400000 gpos100 +band hsx p11.4 p11.4 37400000 42100000 gneg +band hsx p11.3 p11.3 42100000 47200000 gpos75 +band hsx p11.23 p11.23 47200000 49500000 gneg +band hsx p11.22 p11.22 49500000 54500000 gpos25 +band hsx p11.21 p11.21 54500000 56500000 gneg +band hsx p11.1 p11.1 56500000 59400000 acen +band hsx q11.1 q11.1 59400000 61500000 acen +band hsx q11.2 q11.2 61500000 64000000 gneg +band hsx q12 q12 64000000 67500000 gpos50 +band hsx q13.1 q13.1 67500000 72000000 gneg +band hsx q13.2 q13.2 72000000 73700000 gpos50 +band hsx q13.3 q13.3 73700000 75800000 gneg +band hsx q21.1 q21.1 75800000 84400000 gpos100 +band hsx q21.2 q21.2 84400000 86100000 gneg +band hsx q21.31 q21.31 86100000 91800000 gpos100 +band hsx q21.32 q21.32 91800000 93500000 gneg +band hsx q21.33 q21.33 93500000 98200000 gpos75 +band hsx q22.1 q22.1 98200000 102400000 gneg +band hsx q22.2 q22.2 102400000 103500000 gpos50 +band hsx q22.3 q22.3 103500000 108500000 gneg +band hsx q23 q23 108500000 116300000 gpos75 +band hsx q24 q24 116300000 120600000 gneg +band hsx q25 q25 120600000 129700000 gpos100 +band hsx q26.1 q26.1 129700000 130200000 gneg +band hsx q26.2 q26.2 130200000 133400000 gpos25 +band hsx q26.3 q26.3 133400000 137700000 gneg +band hsx q27.1 q27.1 137700000 140000000 gpos75 +band hsx q27.2 q27.2 140000000 141800000 gneg +band hsx q27.3 q27.3 141800000 146800000 gpos100 +band hsx q28 q28 146800000 154824264 gneg +band hsY p11.32 p11.32 0 1700000 gneg +band hsY p11.31 p11.31 1700000 3300000 gpos50 +band hsY p11.2 p11.2 3300000 11200000 gneg +band hsY p11.1 p11.1 11200000 11500000 acen +band hsY q11.1 q11.1 11500000 12400000 acen +band hsY q11.21 q11.21 12400000 14200000 gneg +band hsY q11.221 q11.221 14200000 18800000 gpos50 +band hsY q11.222 q11.222 18800000 21100000 gneg +band hsY q11.223 q11.223 21100000 25200000 gpos50 +band hsY q11.23 q11.23 25200000 27100000 gneg +band hsY q12 q12 27100000 57701691 gvar diff -r a64dc31ab7f2 -r 740057a5126d karyotype/karyotype.human.hg18.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/karyotype/karyotype.human.hg18.txt Fri May 01 07:28:50 2020 -0400 @@ -0,0 +1,886 @@ +chr - hs1 1 0 247249719 chr1 +chr - hs2 2 0 242951149 chr2 +chr - hs3 3 0 199501827 chr3 +chr - hs4 4 0 191273063 chr4 +chr - hs5 5 0 180857866 chr5 +chr - hs6 6 0 170899992 chr6 +chr - hs7 7 0 158821424 chr7 +chr - hs8 8 0 146274826 chr8 +chr - hs9 9 0 140273252 chr9 +chr - hs10 10 0 135374737 chr10 +chr - hs11 11 0 134452384 chr11 +chr - hs12 12 0 132349534 chr12 +chr - hs13 13 0 114142980 chr13 +chr - hs14 14 0 106368585 chr14 +chr - hs15 15 0 100338915 chr15 +chr - hs16 16 0 88827254 chr16 +chr - hs17 17 0 78774742 chr17 +chr - hs18 18 0 76117153 chr18 +chr - hs19 19 0 63811651 chr19 +chr - hs20 20 0 62435964 chr20 +chr - hs21 21 0 46944323 chr21 +chr - hs22 22 0 49691432 chr22 +chr - hsX x 0 154913754 chrx +chr - hsY y 0 57772954 chry +band hs1 p36.33 p36.33 0 2300000 gneg +band hs1 p36.32 p36.32 2300000 5300000 gpos25 +band hs1 p36.31 p36.31 5300000 7100000 gneg +band hs1 p36.23 p36.23 7100000 9200000 gpos25 +band hs1 p36.22 p36.22 9200000 12600000 gneg +band hs1 p36.21 p36.21 12600000 16100000 gpos50 +band hs1 p36.13 p36.13 16100000 20300000 gneg +band hs1 p36.12 p36.12 20300000 23800000 gpos25 +band hs1 p36.11 p36.11 23800000 27800000 gneg +band hs1 p35.3 p35.3 27800000 30000000 gpos25 +band hs1 p35.2 p35.2 30000000 32200000 gneg +band hs1 p35.1 p35.1 32200000 34400000 gpos25 +band hs1 p34.3 p34.3 34400000 39600000 gneg +band hs1 p34.2 p34.2 39600000 43900000 gpos25 +band hs1 p34.1 p34.1 43900000 46500000 gneg +band hs1 p33 p33 46500000 51300000 gpos75 +band hs1 p32.3 p32.3 51300000 56200000 gneg +band hs1 p32.2 p32.2 56200000 58700000 gpos50 +band hs1 p32.1 p32.1 58700000 60900000 gneg +band hs1 p31.3 p31.3 60900000 68700000 gpos50 +band hs1 p31.2 p31.2 68700000 69500000 gneg +band hs1 p31.1 p31.1 69500000 84700000 gpos100 +band hs1 p22.3 p22.3 84700000 88100000 gneg +band hs1 p22.2 p22.2 88100000 92000000 gpos75 +band hs1 p22.1 p22.1 92000000 94500000 gneg +band hs1 p21.3 p21.3 94500000 99400000 gpos75 +band hs1 p21.2 p21.2 99400000 102000000 gneg +band hs1 p21.1 p21.1 102000000 107000000 gpos100 +band hs1 p13.3 p13.3 107000000 111600000 gneg +band hs1 p13.2 p13.2 111600000 115900000 gpos50 +band hs1 p13.1 p13.1 115900000 117600000 gneg +band hs1 p12 p12 117600000 120700000 gpos50 +band hs1 p11.2 p11.2 120700000 121100000 gneg +band hs1 p11.1 p11.1 121100000 124300000 acen +band hs1 q11 q11 124300000 128000000 acen +band hs1 q12 q12 128000000 142400000 gvar +band hs1 q21.1 q21.1 142400000 148000000 gneg +band hs1 q21.2 q21.2 148000000 149600000 gpos50 +band hs1 q21.3 q21.3 149600000 153300000 gneg +band hs1 q22 q22 153300000 154800000 gpos50 +band hs1 q23.1 q23.1 154800000 157300000 gneg +band hs1 q23.2 q23.2 157300000 158800000 gpos50 +band hs1 q23.3 q23.3 158800000 163800000 gneg +band hs1 q24.1 q24.1 163800000 165500000 gpos50 +band hs1 q24.2 q24.2 165500000 169100000 gneg +band hs1 q24.3 q24.3 169100000 171200000 gpos75 +band hs1 q25.1 q25.1 171200000 174300000 gneg +band hs1 q25.2 q25.2 174300000 178600000 gpos50 +band hs1 q25.3 q25.3 178600000 184000000 gneg +band hs1 q31.1 q31.1 184000000 189000000 gpos100 +band hs1 q31.2 q31.2 189000000 192100000 gneg +band hs1 q31.3 q31.3 192100000 197500000 gpos100 +band hs1 q32.1 q32.1 197500000 205300000 gneg +band hs1 q32.2 q32.2 205300000 209500000 gpos25 +band hs1 q32.3 q32.3 209500000 212100000 gneg +band hs1 q41 q41 212100000 222100000 gpos100 +band hs1 q42.11 q42.11 222100000 222700000 gneg +band hs1 q42.12 q42.12 222700000 225100000 gpos25 +band hs1 q42.13 q42.13 225100000 228800000 gneg +band hs1 q42.2 q42.2 228800000 232700000 gpos50 +band hs1 q42.3 q42.3 232700000 234600000 gneg +band hs1 q43 q43 234600000 241700000 gpos75 +band hs1 q44 q44 241700000 247249719 gneg +band hs10 p15.3 p15.3 0 3000000 gneg +band hs10 p15.2 p15.2 3000000 3800000 gpos25 +band hs10 p15.1 p15.1 3800000 6700000 gneg +band hs10 p14 p14 6700000 12300000 gpos75 +band hs10 p13 p13 12300000 17300000 gneg +band hs10 p12.33 p12.33 17300000 19900000 gpos75 +band hs10 p12.32 p12.32 19900000 20500000 gneg +band hs10 p12.31 p12.31 20500000 22800000 gpos75 +band hs10 p12.2 p12.2 22800000 24100000 gneg +band hs10 p12.1 p12.1 24100000 28300000 gpos50 +band hs10 p11.23 p11.23 28300000 31400000 gneg +band hs10 p11.22 p11.22 31400000 34500000 gpos25 +band hs10 p11.21 p11.21 34500000 38800000 gneg +band hs10 p11.1 p11.1 38800000 40300000 acen +band hs10 q11.1 q11.1 40300000 42100000 acen +band hs10 q11.21 q11.21 42100000 46100000 gneg +band hs10 q11.22 q11.22 46100000 50100000 gpos25 +band hs10 q11.23 q11.23 50100000 53300000 gneg +band hs10 q21.1 q21.1 53300000 61200000 gpos100 +band hs10 q21.2 q21.2 61200000 64800000 gneg +band hs10 q21.3 q21.3 64800000 71300000 gpos100 +band hs10 q22.1 q22.1 71300000 74600000 gneg +band hs10 q22.2 q22.2 74600000 77400000 gpos50 +band hs10 q22.3 q22.3 77400000 82000000 gneg +band hs10 q23.1 q23.1 82000000 87900000 gpos100 +band hs10 q23.2 q23.2 87900000 89600000 gneg +band hs10 q23.31 q23.31 89600000 92900000 gpos75 +band hs10 q23.32 q23.32 92900000 94200000 gneg +band hs10 q23.33 q23.33 94200000 98000000 gpos50 +band hs10 q24.1 q24.1 98000000 99400000 gneg +band hs10 q24.2 q24.2 99400000 102000000 gpos50 +band hs10 q24.31 q24.31 102000000 103000000 gneg +band hs10 q24.32 q24.32 103000000 104900000 gpos25 +band hs10 q24.33 q24.33 104900000 105700000 gneg +band hs10 q25.1 q25.1 105700000 111800000 gpos100 +band hs10 q25.2 q25.2 111800000 114900000 gneg +band hs10 q25.3 q25.3 114900000 119100000 gpos75 +band hs10 q26.11 q26.11 119100000 121700000 gneg +band hs10 q26.12 q26.12 121700000 123100000 gpos50 +band hs10 q26.13 q26.13 123100000 127400000 gneg +band hs10 q26.2 q26.2 127400000 130500000 gpos50 +band hs10 q26.3 q26.3 130500000 135374737 gneg +band hs11 p15.5 p15.5 0 2800000 gneg +band hs11 p15.4 p15.4 2800000 10700000 gpos50 +band hs11 p15.3 p15.3 10700000 12600000 gneg +band hs11 p15.2 p15.2 12600000 16100000 gpos50 +band hs11 p15.1 p15.1 16100000 21600000 gneg +band hs11 p14.3 p14.3 21600000 26000000 gpos100 +band hs11 p14.2 p14.2 26000000 27200000 gneg +band hs11 p14.1 p14.1 27200000 31000000 gpos75 +band hs11 p13 p13 31000000 36400000 gneg +band hs11 p12 p12 36400000 43400000 gpos100 +band hs11 p11.2 p11.2 43400000 48800000 gneg +band hs11 p11.12 p11.12 48800000 51400000 gpos75 +band hs11 p11.11 p11.11 51400000 52900000 acen +band hs11 q11 q11 52900000 56400000 acen +band hs11 q12.1 q12.1 56400000 59700000 gpos75 +band hs11 q12.2 q12.2 59700000 61400000 gneg +band hs11 q12.3 q12.3 61400000 63100000 gpos25 +band hs11 q13.1 q13.1 63100000 67100000 gneg +band hs11 q13.2 q13.2 67100000 69200000 gpos25 +band hs11 q13.3 q13.3 69200000 70700000 gneg +band hs11 q13.4 q13.4 70700000 74900000 gpos50 +band hs11 q13.5 q13.5 74900000 76700000 gneg +band hs11 q14.1 q14.1 76700000 85300000 gpos100 +band hs11 q14.2 q14.2 85300000 87900000 gneg +band hs11 q14.3 q14.3 87900000 92300000 gpos100 +band hs11 q21 q21 92300000 96700000 gneg +band hs11 q22.1 q22.1 96700000 101600000 gpos100 +band hs11 q22.2 q22.2 101600000 102400000 gneg +band hs11 q22.3 q22.3 102400000 110000000 gpos100 +band hs11 q23.1 q23.1 110000000 112800000 gneg +band hs11 q23.2 q23.2 112800000 115400000 gpos50 +band hs11 q23.3 q23.3 115400000 120700000 gneg +band hs11 q24.1 q24.1 120700000 123500000 gpos50 +band hs11 q24.2 q24.2 123500000 127400000 gneg +band hs11 q24.3 q24.3 127400000 130300000 gpos50 +band hs11 q25 q25 130300000 134452384 gneg +band hs12 p13.33 p13.33 0 3100000 gneg +band hs12 p13.32 p13.32 3100000 5300000 gpos25 +band hs12 p13.31 p13.31 5300000 10000000 gneg +band hs12 p13.2 p13.2 10000000 12600000 gpos75 +band hs12 p13.1 p13.1 12600000 14800000 gneg +band hs12 p12.3 p12.3 14800000 19900000 gpos100 +band hs12 p12.2 p12.2 19900000 21200000 gneg +band hs12 p12.1 p12.1 21200000 26300000 gpos100 +band hs12 p11.23 p11.23 26300000 27700000 gneg +band hs12 p11.22 p11.22 27700000 30600000 gpos50 +band hs12 p11.21 p11.21 30600000 33200000 gneg +band hs12 p11.1 p11.1 33200000 35400000 acen +band hs12 q11 q11 35400000 36500000 acen +band hs12 q12 q12 36500000 44600000 gpos100 +band hs12 q13.11 q13.11 44600000 47400000 gneg +band hs12 q13.12 q13.12 47400000 48400000 gpos25 +band hs12 q13.13 q13.13 48400000 53100000 gneg +band hs12 q13.2 q13.2 53100000 55200000 gpos25 +band hs12 q13.3 q13.3 55200000 56300000 gneg +band hs12 q14.1 q14.1 56300000 61400000 gpos75 +band hs12 q14.2 q14.2 61400000 63400000 gneg +band hs12 q14.3 q14.3 63400000 66000000 gpos50 +band hs12 q15 q15 66000000 69800000 gneg +band hs12 q21.1 q21.1 69800000 74100000 gpos75 +band hs12 q21.2 q21.2 74100000 78700000 gneg +band hs12 q21.31 q21.31 78700000 85100000 gpos100 +band hs12 q21.32 q21.32 85100000 87500000 gneg +band hs12 q21.33 q21.33 87500000 91200000 gpos100 +band hs12 q22 q22 91200000 94800000 gneg +band hs12 q23.1 q23.1 94800000 100000000 gpos75 +band hs12 q23.2 q23.2 100000000 102400000 gneg +band hs12 q23.3 q23.3 102400000 107500000 gpos50 +band hs12 q24.11 q24.11 107500000 110200000 gneg +band hs12 q24.12 q24.12 110200000 110800000 gpos25 +band hs12 q24.13 q24.13 110800000 112800000 gneg +band hs12 q24.21 q24.21 112800000 115300000 gpos50 +band hs12 q24.22 q24.22 115300000 116700000 gneg +band hs12 q24.23 q24.23 116700000 119100000 gpos50 +band hs12 q24.31 q24.31 119100000 124500000 gneg +band hs12 q24.32 q24.32 124500000 128700000 gpos50 +band hs12 q24.33 q24.33 128700000 132349534 gneg +band hs13 p13 p13 0 3800000 gvar +band hs13 p12 p12 3800000 8300000 stalk +band hs13 p11.2 p11.2 8300000 13500000 gvar +band hs13 p11.1 p11.1 13500000 16000000 acen +band hs13 q11 q11 16000000 18400000 acen +band hs13 q12.11 q12.11 18400000 22200000 gneg +band hs13 q12.12 q12.12 22200000 24400000 gpos25 +band hs13 q12.13 q12.13 24400000 26700000 gneg +band hs13 q12.2 q12.2 26700000 27800000 gpos25 +band hs13 q12.3 q12.3 27800000 31100000 gneg +band hs13 q13.1 q13.1 31100000 32900000 gpos50 +band hs13 q13.2 q13.2 32900000 34700000 gneg +band hs13 q13.3 q13.3 34700000 39500000 gpos75 +band hs13 q14.11 q14.11 39500000 44300000 gneg +band hs13 q14.12 q14.12 44300000 45900000 gpos25 +band hs13 q14.13 q14.13 45900000 46200000 gneg +band hs13 q14.2 q14.2 46200000 48900000 gpos50 +band hs13 q14.3 q14.3 48900000 52200000 gneg +band hs13 q21.1 q21.1 52200000 57600000 gpos100 +band hs13 q21.2 q21.2 57600000 60500000 gneg +band hs13 q21.31 q21.31 60500000 64100000 gpos75 +band hs13 q21.32 q21.32 64100000 67200000 gneg +band hs13 q21.33 q21.33 67200000 72100000 gpos100 +band hs13 q22.1 q22.1 72100000 74200000 gneg +band hs13 q22.2 q22.2 74200000 76000000 gpos50 +band hs13 q22.3 q22.3 76000000 77800000 gneg +band hs13 q31.1 q31.1 77800000 86500000 gpos100 +band hs13 q31.2 q31.2 86500000 88800000 gneg +band hs13 q31.3 q31.3 88800000 93800000 gpos100 +band hs13 q32.1 q32.1 93800000 97000000 gneg +band hs13 q32.2 q32.2 97000000 98100000 gpos25 +band hs13 q32.3 q32.3 98100000 100500000 gneg +band hs13 q33.1 q33.1 100500000 103700000 gpos100 +band hs13 q33.2 q33.2 103700000 105800000 gneg +band hs13 q33.3 q33.3 105800000 109100000 gpos100 +band hs13 q34 q34 109100000 114142980 gneg +band hs14 p13 p13 0 3100000 gvar +band hs14 p12 p12 3100000 6700000 stalk +band hs14 p11.2 p11.2 6700000 13600000 gvar +band hs14 p11.1 p11.1 13600000 15600000 acen +band hs14 q11.1 q11.1 15600000 19100000 acen +band hs14 q11.2 q11.2 19100000 23600000 gneg +band hs14 q12 q12 23600000 31800000 gpos100 +band hs14 q13.1 q13.1 31800000 34100000 gneg +band hs14 q13.2 q13.2 34100000 35600000 gpos50 +band hs14 q13.3 q13.3 35600000 36900000 gneg +band hs14 q21.1 q21.1 36900000 41000000 gpos100 +band hs14 q21.2 q21.2 41000000 43200000 gneg +band hs14 q21.3 q21.3 43200000 48300000 gpos100 +band hs14 q22.1 q22.1 48300000 52300000 gneg +band hs14 q22.2 q22.2 52300000 54400000 gpos25 +band hs14 q22.3 q22.3 54400000 55800000 gneg +band hs14 q23.1 q23.1 55800000 61200000 gpos75 +band hs14 q23.2 q23.2 61200000 64000000 gneg +band hs14 q23.3 q23.3 64000000 67000000 gpos50 +band hs14 q24.1 q24.1 67000000 69300000 gneg +band hs14 q24.2 q24.2 69300000 72900000 gpos50 +band hs14 q24.3 q24.3 72900000 78400000 gneg +band hs14 q31.1 q31.1 78400000 82600000 gpos100 +band hs14 q31.2 q31.2 82600000 84000000 gneg +band hs14 q31.3 q31.3 84000000 88900000 gpos100 +band hs14 q32.11 q32.11 88900000 90500000 gneg +band hs14 q32.12 q32.12 90500000 92800000 gpos25 +band hs14 q32.13 q32.13 92800000 95400000 gneg +band hs14 q32.2 q32.2 95400000 100400000 gpos50 +band hs14 q32.31 q32.31 100400000 102200000 gneg +band hs14 q32.32 q32.32 102200000 103000000 gpos50 +band hs14 q32.33 q32.33 103000000 106368585 gneg +band hs15 p13 p13 0 3500000 gvar +band hs15 p12 p12 3500000 7900000 stalk +band hs15 p11.2 p11.2 7900000 14100000 gvar +band hs15 p11.1 p11.1 14100000 17000000 acen +band hs15 q11.1 q11.1 17000000 18400000 acen +band hs15 q11.2 q11.2 18400000 23300000 gneg +band hs15 q12 q12 23300000 25700000 gpos50 +band hs15 q13.1 q13.1 25700000 28000000 gneg +band hs15 q13.2 q13.2 28000000 29000000 gpos50 +band hs15 q13.3 q13.3 29000000 31400000 gneg +band hs15 q14 q14 31400000 37900000 gpos75 +band hs15 q15.1 q15.1 37900000 40700000 gneg +band hs15 q15.2 q15.2 40700000 41400000 gpos25 +band hs15 q15.3 q15.3 41400000 42700000 gneg +band hs15 q21.1 q21.1 42700000 47600000 gpos75 +band hs15 q21.2 q21.2 47600000 51100000 gneg +band hs15 q21.3 q21.3 51100000 55800000 gpos75 +band hs15 q22.1 q22.1 55800000 57100000 gneg +band hs15 q22.2 q22.2 57100000 61500000 gpos25 +band hs15 q22.31 q22.31 61500000 64900000 gneg +band hs15 q22.32 q22.32 64900000 65000000 gpos25 +band hs15 q22.33 q22.33 65000000 65300000 gneg +band hs15 q23 q23 65300000 70400000 gpos25 +band hs15 q24.1 q24.1 70400000 73100000 gneg +band hs15 q24.2 q24.2 73100000 74400000 gpos25 +band hs15 q24.3 q24.3 74400000 76100000 gneg +band hs15 q25.1 q25.1 76100000 79500000 gpos50 +band hs15 q25.2 q25.2 79500000 83000000 gneg +band hs15 q25.3 q25.3 83000000 86900000 gpos50 +band hs15 q26.1 q26.1 86900000 92100000 gneg +band hs15 q26.2 q26.2 92100000 96300000 gpos50 +band hs15 q26.3 q26.3 96300000 100338915 gneg +band hs16 p13.3 p13.3 0 6300000 gneg +band hs16 p13.2 p13.2 6300000 10300000 gpos50 +band hs16 p13.13 p13.13 10300000 12500000 gneg +band hs16 p13.12 p13.12 12500000 14700000 gpos50 +band hs16 p13.11 p13.11 14700000 16700000 gneg +band hs16 p12.3 p12.3 16700000 20500000 gpos50 +band hs16 p12.2 p12.2 20500000 21700000 gneg +band hs16 p12.1 p12.1 21700000 27600000 gpos50 +band hs16 p11.2 p11.2 27600000 34400000 gneg +band hs16 p11.1 p11.1 34400000 38200000 acen +band hs16 q11.1 q11.1 38200000 40700000 acen +band hs16 q11.2 q11.2 40700000 45500000 gvar +band hs16 q12.1 q12.1 45500000 51200000 gneg +band hs16 q12.2 q12.2 51200000 54500000 gpos50 +band hs16 q13 q13 54500000 56700000 gneg +band hs16 q21 q21 56700000 65200000 gpos100 +band hs16 q22.1 q22.1 65200000 69400000 gneg +band hs16 q22.2 q22.2 69400000 69800000 gpos50 +band hs16 q22.3 q22.3 69800000 73300000 gneg +band hs16 q23.1 q23.1 73300000 78200000 gpos75 +band hs16 q23.2 q23.2 78200000 80500000 gneg +band hs16 q23.3 q23.3 80500000 82700000 gpos50 +band hs16 q24.1 q24.1 82700000 85600000 gneg +band hs16 q24.2 q24.2 85600000 87200000 gpos25 +band hs16 q24.3 q24.3 87200000 88827254 gneg +band hs17 p13.3 p13.3 0 3600000 gneg +band hs17 p13.2 p13.2 3600000 6800000 gpos50 +band hs17 p13.1 p13.1 6800000 11200000 gneg +band hs17 p12 p12 11200000 15900000 gpos75 +band hs17 p11.2 p11.2 15900000 22100000 gneg +band hs17 p11.1 p11.1 22100000 22200000 acen +band hs17 q11.1 q11.1 22200000 23200000 acen +band hs17 q11.2 q11.2 23200000 28800000 gneg +band hs17 q12 q12 28800000 35400000 gpos50 +band hs17 q21.1 q21.1 35400000 35600000 gneg +band hs17 q21.2 q21.2 35600000 37800000 gpos25 +band hs17 q21.31 q21.31 37800000 41900000 gneg +band hs17 q21.32 q21.32 41900000 44800000 gpos25 +band hs17 q21.33 q21.33 44800000 47600000 gneg +band hs17 q22 q22 47600000 54900000 gpos75 +band hs17 q23.1 q23.1 54900000 55600000 gneg +band hs17 q23.2 q23.2 55600000 58400000 gpos75 +band hs17 q23.3 q23.3 58400000 59900000 gneg +band hs17 q24.1 q24.1 59900000 61600000 gpos50 +band hs17 q24.2 q24.2 61600000 64600000 gneg +band hs17 q24.3 q24.3 64600000 68400000 gpos75 +band hs17 q25.1 q25.1 68400000 72200000 gneg +band hs17 q25.2 q25.2 72200000 72900000 gpos25 +band hs17 q25.3 q25.3 72900000 78774742 gneg +band hs18 p11.32 p11.32 0 2900000 gneg +band hs18 p11.31 p11.31 2900000 7200000 gpos50 +band hs18 p11.23 p11.23 7200000 8500000 gneg +band hs18 p11.22 p11.22 8500000 10900000 gpos25 +band hs18 p11.21 p11.21 10900000 15400000 gneg +band hs18 p11.1 p11.1 15400000 16100000 acen +band hs18 q11.1 q11.1 16100000 17300000 acen +band hs18 q11.2 q11.2 17300000 23300000 gneg +band hs18 q12.1 q12.1 23300000 31000000 gpos100 +band hs18 q12.2 q12.2 31000000 35500000 gneg +band hs18 q12.3 q12.3 35500000 41800000 gpos75 +band hs18 q21.1 q21.1 41800000 46400000 gneg +band hs18 q21.2 q21.2 46400000 52000000 gpos75 +band hs18 q21.31 q21.31 52000000 54400000 gneg +band hs18 q21.32 q21.32 54400000 57100000 gpos50 +band hs18 q21.33 q21.33 57100000 59800000 gneg +band hs18 q22.1 q22.1 59800000 64900000 gpos100 +band hs18 q22.2 q22.2 64900000 66900000 gneg +band hs18 q22.3 q22.3 66900000 71300000 gpos25 +band hs18 q23 q23 71300000 76117153 gneg +band hs19 p13.3 p13.3 0 6900000 gneg +band hs19 p13.2 p13.2 6900000 12600000 gpos25 +band hs19 p13.13 p13.13 12600000 13800000 gneg +band hs19 p13.12 p13.12 13800000 16100000 gpos25 +band hs19 p13.11 p13.11 16100000 19800000 gneg +band hs19 p12 p12 19800000 26700000 gvar +band hs19 p11 p11 26700000 28500000 acen +band hs19 q11 q11 28500000 30200000 acen +band hs19 q12 q12 30200000 37100000 gvar +band hs19 q13.11 q13.11 37100000 40300000 gneg +band hs19 q13.12 q13.12 40300000 43000000 gpos25 +band hs19 q13.13 q13.13 43000000 43400000 gneg +band hs19 q13.2 q13.2 43400000 47800000 gpos25 +band hs19 q13.31 q13.31 47800000 50000000 gneg +band hs19 q13.32 q13.32 50000000 53800000 gpos25 +band hs19 q13.33 q13.33 53800000 57600000 gneg +band hs19 q13.41 q13.41 57600000 59100000 gpos25 +band hs19 q13.42 q13.42 59100000 61400000 gneg +band hs19 q13.43 q13.43 61400000 63811651 gpos25 +band hs2 p25.3 p25.3 0 4300000 gneg +band hs2 p25.2 p25.2 4300000 7000000 gpos50 +band hs2 p25.1 p25.1 7000000 12800000 gneg +band hs2 p24.3 p24.3 12800000 17000000 gpos75 +band hs2 p24.2 p24.2 17000000 19100000 gneg +band hs2 p24.1 p24.1 19100000 23900000 gpos75 +band hs2 p23.3 p23.3 23900000 27700000 gneg +band hs2 p23.2 p23.2 27700000 29800000 gpos25 +band hs2 p23.1 p23.1 29800000 31900000 gneg +band hs2 p22.3 p22.3 31900000 36400000 gpos75 +band hs2 p22.2 p22.2 36400000 38400000 gneg +band hs2 p22.1 p22.1 38400000 41600000 gpos50 +band hs2 p21 p21 41600000 47600000 gneg +band hs2 p16.3 p16.3 47600000 52700000 gpos100 +band hs2 p16.2 p16.2 52700000 54800000 gneg +band hs2 p16.1 p16.1 54800000 61100000 gpos100 +band hs2 p15 p15 61100000 64000000 gneg +band hs2 p14 p14 64000000 70500000 gpos50 +band hs2 p13.3 p13.3 70500000 72600000 gneg +band hs2 p13.2 p13.2 72600000 73900000 gpos50 +band hs2 p13.1 p13.1 73900000 75400000 gneg +band hs2 p12 p12 75400000 83700000 gpos100 +band hs2 p11.2 p11.2 83700000 91000000 gneg +band hs2 p11.1 p11.1 91000000 93300000 acen +band hs2 q11.1 q11.1 93300000 95700000 acen +band hs2 q11.2 q11.2 95700000 102100000 gneg +band hs2 q12.1 q12.1 102100000 105300000 gpos50 +band hs2 q12.2 q12.2 105300000 106700000 gneg +band hs2 q12.3 q12.3 106700000 108600000 gpos25 +band hs2 q13 q13 108600000 113800000 gneg +band hs2 q14.1 q14.1 113800000 118600000 gpos50 +band hs2 q14.2 q14.2 118600000 122100000 gneg +band hs2 q14.3 q14.3 122100000 129600000 gpos50 +band hs2 q21.1 q21.1 129600000 132200000 gneg +band hs2 q21.2 q21.2 132200000 134800000 gpos25 +band hs2 q21.3 q21.3 134800000 136600000 gneg +band hs2 q22.1 q22.1 136600000 142400000 gpos100 +band hs2 q22.2 q22.2 142400000 144700000 gneg +band hs2 q22.3 q22.3 144700000 148400000 gpos100 +band hs2 q23.1 q23.1 148400000 149600000 gneg +band hs2 q23.2 q23.2 149600000 150300000 gpos25 +band hs2 q23.3 q23.3 150300000 154600000 gneg +band hs2 q24.1 q24.1 154600000 159600000 gpos75 +band hs2 q24.2 q24.2 159600000 163500000 gneg +band hs2 q24.3 q24.3 163500000 169500000 gpos75 +band hs2 q31.1 q31.1 169500000 177700000 gneg +band hs2 q31.2 q31.2 177700000 180400000 gpos50 +band hs2 q31.3 q31.3 180400000 182700000 gneg +band hs2 q32.1 q32.1 182700000 189100000 gpos75 +band hs2 q32.2 q32.2 189100000 191600000 gneg +band hs2 q32.3 q32.3 191600000 197100000 gpos75 +band hs2 q33.1 q33.1 197100000 203500000 gneg +band hs2 q33.2 q33.2 203500000 205600000 gpos50 +band hs2 q33.3 q33.3 205600000 209100000 gneg +band hs2 q34 q34 209100000 215100000 gpos100 +band hs2 q35 q35 215100000 221300000 gneg +band hs2 q36.1 q36.1 221300000 224900000 gpos75 +band hs2 q36.2 q36.2 224900000 225800000 gneg +band hs2 q36.3 q36.3 225800000 230700000 gpos100 +band hs2 q37.1 q37.1 230700000 235300000 gneg +band hs2 q37.2 q37.2 235300000 237000000 gpos50 +band hs2 q37.3 q37.3 237000000 242951149 gneg +band hs20 p13 p13 0 5000000 gneg +band hs20 p12.3 p12.3 5000000 9000000 gpos75 +band hs20 p12.2 p12.2 9000000 11900000 gneg +band hs20 p12.1 p12.1 11900000 17800000 gpos75 +band hs20 p11.23 p11.23 17800000 21200000 gneg +band hs20 p11.22 p11.22 21200000 22300000 gpos25 +band hs20 p11.21 p11.21 22300000 25700000 gneg +band hs20 p11.1 p11.1 25700000 27100000 acen +band hs20 q11.1 q11.1 27100000 28400000 acen +band hs20 q11.21 q11.21 28400000 31500000 gneg +band hs20 q11.22 q11.22 31500000 33900000 gpos25 +band hs20 q11.23 q11.23 33900000 37100000 gneg +band hs20 q12 q12 37100000 41100000 gpos75 +band hs20 q13.11 q13.11 41100000 41600000 gneg +band hs20 q13.12 q13.12 41600000 45800000 gpos25 +band hs20 q13.13 q13.13 45800000 49200000 gneg +band hs20 q13.2 q13.2 49200000 54400000 gpos75 +band hs20 q13.31 q13.31 54400000 55900000 gneg +band hs20 q13.32 q13.32 55900000 57900000 gpos50 +band hs20 q13.33 q13.33 57900000 62435964 gneg +band hs21 p13 p13 0 2900000 gvar +band hs21 p12 p12 2900000 6300000 stalk +band hs21 p11.2 p11.2 6300000 10000000 gvar +band hs21 p11.1 p11.1 10000000 12300000 acen +band hs21 q11.1 q11.1 12300000 13200000 acen +band hs21 q11.2 q11.2 13200000 15300000 gneg +band hs21 q21.1 q21.1 15300000 22900000 gpos100 +band hs21 q21.2 q21.2 22900000 25800000 gneg +band hs21 q21.3 q21.3 25800000 30500000 gpos75 +band hs21 q22.11 q22.11 30500000 34700000 gneg +band hs21 q22.12 q22.12 34700000 36700000 gpos50 +band hs21 q22.13 q22.13 36700000 38600000 gneg +band hs21 q22.2 q22.2 38600000 41400000 gpos50 +band hs21 q22.3 q22.3 41400000 46944323 gneg +band hs22 p13 p13 0 3000000 gvar +band hs22 p12 p12 3000000 6600000 stalk +band hs22 p11.2 p11.2 6600000 9600000 gvar +band hs22 p11.1 p11.1 9600000 11800000 acen +band hs22 q11.1 q11.1 11800000 16300000 acen +band hs22 q11.21 q11.21 16300000 20500000 gneg +band hs22 q11.22 q11.22 20500000 21800000 gpos25 +band hs22 q11.23 q11.23 21800000 24300000 gneg +band hs22 q12.1 q12.1 24300000 27900000 gpos50 +band hs22 q12.2 q12.2 27900000 30500000 gneg +band hs22 q12.3 q12.3 30500000 35900000 gpos50 +band hs22 q13.1 q13.1 35900000 39300000 gneg +band hs22 q13.2 q13.2 39300000 42600000 gpos50 +band hs22 q13.31 q13.31 42600000 47000000 gneg +band hs22 q13.32 q13.32 47000000 48200000 gpos50 +band hs22 q13.33 q13.33 48200000 49691432 gneg +band hs3 p26.3 p26.3 0 3500000 gpos50 +band hs3 p26.2 p26.2 3500000 5500000 gneg +band hs3 p26.1 p26.1 5500000 8700000 gpos50 +band hs3 p25.3 p25.3 8700000 11500000 gneg +band hs3 p25.2 p25.2 11500000 12400000 gpos25 +band hs3 p25.1 p25.1 12400000 14700000 gneg +band hs3 p24.3 p24.3 14700000 23800000 gpos100 +band hs3 p24.2 p24.2 23800000 26400000 gneg +band hs3 p24.1 p24.1 26400000 30800000 gpos75 +band hs3 p23 p23 30800000 32100000 gneg +band hs3 p22.3 p22.3 32100000 36500000 gpos50 +band hs3 p22.2 p22.2 36500000 39300000 gneg +band hs3 p22.1 p22.1 39300000 43600000 gpos75 +band hs3 p21.33 p21.33 43600000 44400000 gneg +band hs3 p21.32 p21.32 44400000 44700000 gpos50 +band hs3 p21.31 p21.31 44700000 51400000 gneg +band hs3 p21.2 p21.2 51400000 51700000 gpos25 +band hs3 p21.1 p21.1 51700000 54400000 gneg +band hs3 p14.3 p14.3 54400000 58500000 gpos50 +band hs3 p14.2 p14.2 58500000 63700000 gneg +band hs3 p14.1 p14.1 63700000 71800000 gpos50 +band hs3 p13 p13 71800000 74200000 gneg +band hs3 p12.3 p12.3 74200000 81800000 gpos75 +band hs3 p12.2 p12.2 81800000 83700000 gneg +band hs3 p12.1 p12.1 83700000 87200000 gpos75 +band hs3 p11.2 p11.2 87200000 89400000 gneg +band hs3 p11.1 p11.1 89400000 91700000 acen +band hs3 q11.1 q11.1 91700000 93200000 acen +band hs3 q11.2 q11.2 93200000 99800000 gvar +band hs3 q12.1 q12.1 99800000 101500000 gneg +band hs3 q12.2 q12.2 101500000 102500000 gpos25 +band hs3 q12.3 q12.3 102500000 104400000 gneg +band hs3 q13.11 q13.11 104400000 107800000 gpos75 +band hs3 q13.12 q13.12 107800000 109500000 gneg +band hs3 q13.13 q13.13 109500000 112800000 gpos50 +band hs3 q13.2 q13.2 112800000 115000000 gneg +band hs3 q13.31 q13.31 115000000 118800000 gpos75 +band hs3 q13.32 q13.32 118800000 120500000 gneg +band hs3 q13.33 q13.33 120500000 123400000 gpos75 +band hs3 q21.1 q21.1 123400000 125400000 gneg +band hs3 q21.2 q21.2 125400000 127700000 gpos25 +band hs3 q21.3 q21.3 127700000 131500000 gneg +band hs3 q22.1 q22.1 131500000 135700000 gpos25 +band hs3 q22.2 q22.2 135700000 137400000 gneg +band hs3 q22.3 q22.3 137400000 140400000 gpos25 +band hs3 q23 q23 140400000 144400000 gneg +band hs3 q24 q24 144400000 150400000 gpos100 +band hs3 q25.1 q25.1 150400000 153500000 gneg +band hs3 q25.2 q25.2 153500000 156300000 gpos50 +band hs3 q25.31 q25.31 156300000 158100000 gneg +band hs3 q25.32 q25.32 158100000 159900000 gpos50 +band hs3 q25.33 q25.33 159900000 161200000 gneg +band hs3 q26.1 q26.1 161200000 169200000 gpos100 +band hs3 q26.2 q26.2 169200000 172500000 gneg +band hs3 q26.31 q26.31 172500000 177300000 gpos75 +band hs3 q26.32 q26.32 177300000 180600000 gneg +band hs3 q26.33 q26.33 180600000 184200000 gpos75 +band hs3 q27.1 q27.1 184200000 186000000 gneg +band hs3 q27.2 q27.2 186000000 187500000 gpos25 +band hs3 q27.3 q27.3 187500000 189400000 gneg +band hs3 q28 q28 189400000 193800000 gpos75 +band hs3 q29 q29 193800000 199501827 gneg +band hs4 p16.3 p16.3 0 3100000 gneg +band hs4 p16.2 p16.2 3100000 5200000 gpos25 +band hs4 p16.1 p16.1 5200000 10900000 gneg +band hs4 p15.33 p15.33 10900000 15300000 gpos50 +band hs4 p15.32 p15.32 15300000 18500000 gneg +band hs4 p15.31 p15.31 18500000 23100000 gpos75 +band hs4 p15.2 p15.2 23100000 27900000 gneg +band hs4 p15.1 p15.1 27900000 35500000 gpos100 +band hs4 p14 p14 35500000 40900000 gneg +band hs4 p13 p13 40900000 45600000 gpos50 +band hs4 p12 p12 45600000 48700000 gneg +band hs4 p11 p11 48700000 50700000 acen +band hs4 q11 q11 50700000 52400000 acen +band hs4 q12 q12 52400000 59200000 gneg +band hs4 q13.1 q13.1 59200000 66300000 gpos100 +band hs4 q13.2 q13.2 66300000 70400000 gneg +band hs4 q13.3 q13.3 70400000 76500000 gpos75 +band hs4 q21.1 q21.1 76500000 79200000 gneg +band hs4 q21.21 q21.21 79200000 82600000 gpos50 +band hs4 q21.22 q21.22 82600000 84300000 gneg +band hs4 q21.23 q21.23 84300000 87100000 gpos25 +band hs4 q21.3 q21.3 87100000 88200000 gneg +band hs4 q22.1 q22.1 88200000 94000000 gpos75 +band hs4 q22.2 q22.2 94000000 95400000 gneg +band hs4 q22.3 q22.3 95400000 99100000 gpos75 +band hs4 q23 q23 99100000 102500000 gneg +band hs4 q24 q24 102500000 107900000 gpos50 +band hs4 q25 q25 107900000 114100000 gneg +band hs4 q26 q26 114100000 120600000 gpos75 +band hs4 q27 q27 120600000 124000000 gneg +band hs4 q28.1 q28.1 124000000 129100000 gpos50 +band hs4 q28.2 q28.2 129100000 131300000 gneg +band hs4 q28.3 q28.3 131300000 139500000 gpos100 +band hs4 q31.1 q31.1 139500000 141700000 gneg +band hs4 q31.21 q31.21 141700000 145000000 gpos25 +band hs4 q31.22 q31.22 145000000 147700000 gneg +band hs4 q31.23 q31.23 147700000 151000000 gpos25 +band hs4 q31.3 q31.3 151000000 155100000 gneg +band hs4 q32.1 q32.1 155100000 161500000 gpos100 +band hs4 q32.2 q32.2 161500000 164500000 gneg +band hs4 q32.3 q32.3 164500000 170400000 gpos100 +band hs4 q33 q33 170400000 172200000 gneg +band hs4 q34.1 q34.1 172200000 176600000 gpos75 +band hs4 q34.2 q34.2 176600000 177800000 gneg +band hs4 q34.3 q34.3 177800000 182600000 gpos100 +band hs4 q35.1 q35.1 182600000 187300000 gneg +band hs4 q35.2 q35.2 187300000 191273063 gpos25 +band hs5 p15.33 p15.33 0 4400000 gneg +band hs5 p15.32 p15.32 4400000 6000000 gpos25 +band hs5 p15.31 p15.31 6000000 8200000 gneg +band hs5 p15.2 p15.2 8200000 15100000 gpos50 +band hs5 p15.1 p15.1 15100000 18500000 gneg +band hs5 p14.3 p14.3 18500000 23300000 gpos100 +band hs5 p14.2 p14.2 23300000 24700000 gneg +band hs5 p14.1 p14.1 24700000 29300000 gpos100 +band hs5 p13.3 p13.3 29300000 34400000 gneg +band hs5 p13.2 p13.2 34400000 38500000 gpos25 +band hs5 p13.1 p13.1 38500000 42400000 gneg +band hs5 p12 p12 42400000 45800000 gpos50 +band hs5 p11 p11 45800000 47700000 acen +band hs5 q11.1 q11.1 47700000 50500000 acen +band hs5 q11.2 q11.2 50500000 58900000 gneg +band hs5 q12.1 q12.1 58900000 63000000 gpos75 +band hs5 q12.2 q12.2 63000000 63700000 gneg +band hs5 q12.3 q12.3 63700000 66500000 gpos75 +band hs5 q13.1 q13.1 66500000 68400000 gneg +band hs5 q13.2 q13.2 68400000 73300000 gpos50 +band hs5 q13.3 q13.3 73300000 76400000 gneg +band hs5 q14.1 q14.1 76400000 81300000 gpos50 +band hs5 q14.2 q14.2 81300000 82800000 gneg +band hs5 q14.3 q14.3 82800000 91900000 gpos100 +band hs5 q15 q15 91900000 97300000 gneg +band hs5 q21.1 q21.1 97300000 102800000 gpos100 +band hs5 q21.2 q21.2 102800000 104500000 gneg +band hs5 q21.3 q21.3 104500000 109600000 gpos100 +band hs5 q22.1 q22.1 109600000 111500000 gneg +band hs5 q22.2 q22.2 111500000 113100000 gpos50 +band hs5 q22.3 q22.3 113100000 115200000 gneg +band hs5 q23.1 q23.1 115200000 121500000 gpos100 +band hs5 q23.2 q23.2 121500000 127300000 gneg +band hs5 q23.3 q23.3 127300000 130400000 gpos100 +band hs5 q31.1 q31.1 130400000 135400000 gneg +band hs5 q31.2 q31.2 135400000 139000000 gpos25 +band hs5 q31.3 q31.3 139000000 143100000 gneg +band hs5 q32 q32 143100000 147200000 gpos75 +band hs5 q33.1 q33.1 147200000 152100000 gneg +band hs5 q33.2 q33.2 152100000 155600000 gpos50 +band hs5 q33.3 q33.3 155600000 159900000 gneg +band hs5 q34 q34 159900000 167400000 gpos100 +band hs5 q35.1 q35.1 167400000 172200000 gneg +band hs5 q35.2 q35.2 172200000 176500000 gpos25 +band hs5 q35.3 q35.3 176500000 180857866 gneg +band hs6 p25.3 p25.3 0 2300000 gneg +band hs6 p25.2 p25.2 2300000 4100000 gpos25 +band hs6 p25.1 p25.1 4100000 7000000 gneg +band hs6 p24.3 p24.3 7000000 10600000 gpos50 +band hs6 p24.2 p24.2 10600000 11200000 gneg +band hs6 p24.1 p24.1 11200000 13500000 gpos25 +band hs6 p23 p23 13500000 15500000 gneg +band hs6 p22.3 p22.3 15500000 23500000 gpos75 +band hs6 p22.2 p22.2 23500000 26100000 gneg +band hs6 p22.1 p22.1 26100000 29900000 gpos50 +band hs6 p21.33 p21.33 29900000 31900000 gneg +band hs6 p21.32 p21.32 31900000 33600000 gpos25 +band hs6 p21.31 p21.31 33600000 36800000 gneg +band hs6 p21.2 p21.2 36800000 40600000 gpos25 +band hs6 p21.1 p21.1 40600000 45200000 gneg +band hs6 p12.3 p12.3 45200000 51100000 gpos100 +band hs6 p12.2 p12.2 51100000 52600000 gneg +band hs6 p12.1 p12.1 52600000 57200000 gpos100 +band hs6 p11.2 p11.2 57200000 58400000 gneg +band hs6 p11.1 p11.1 58400000 60500000 acen +band hs6 q11.1 q11.1 60500000 63400000 acen +band hs6 q11.2 q11.2 63400000 63500000 gneg +band hs6 q12 q12 63500000 70000000 gpos100 +band hs6 q13 q13 70000000 75900000 gneg +band hs6 q14.1 q14.1 75900000 83900000 gpos50 +band hs6 q14.2 q14.2 83900000 84700000 gneg +band hs6 q14.3 q14.3 84700000 87500000 gpos50 +band hs6 q15 q15 87500000 92100000 gneg +band hs6 q16.1 q16.1 92100000 98700000 gpos100 +band hs6 q16.2 q16.2 98700000 99900000 gneg +band hs6 q16.3 q16.3 99900000 104800000 gpos100 +band hs6 q21 q21 104800000 113900000 gneg +band hs6 q22.1 q22.1 113900000 117100000 gpos75 +band hs6 q22.2 q22.2 117100000 118600000 gneg +band hs6 q22.31 q22.31 118600000 126200000 gpos100 +band hs6 q22.32 q22.32 126200000 127300000 gneg +band hs6 q22.33 q22.33 127300000 130400000 gpos75 +band hs6 q23.1 q23.1 130400000 131300000 gneg +band hs6 q23.2 q23.2 131300000 135200000 gpos50 +band hs6 q23.3 q23.3 135200000 139100000 gneg +band hs6 q24.1 q24.1 139100000 142900000 gpos75 +band hs6 q24.2 q24.2 142900000 145700000 gneg +band hs6 q24.3 q24.3 145700000 149100000 gpos75 +band hs6 q25.1 q25.1 149100000 152600000 gneg +band hs6 q25.2 q25.2 152600000 155600000 gpos50 +band hs6 q25.3 q25.3 155600000 160900000 gneg +band hs6 q26 q26 160900000 164400000 gpos50 +band hs6 q27 q27 164400000 170899992 gneg +band hs7 p22.3 p22.3 0 2100000 gneg +band hs7 p22.2 p22.2 2100000 4500000 gpos25 +band hs7 p22.1 p22.1 4500000 7200000 gneg +band hs7 p21.3 p21.3 7200000 13300000 gpos100 +band hs7 p21.2 p21.2 13300000 15200000 gneg +band hs7 p21.1 p21.1 15200000 19500000 gpos100 +band hs7 p15.3 p15.3 19500000 24900000 gneg +band hs7 p15.2 p15.2 24900000 28000000 gpos50 +band hs7 p15.1 p15.1 28000000 31800000 gneg +band hs7 p14.3 p14.3 31800000 35600000 gpos75 +band hs7 p14.2 p14.2 35600000 37500000 gneg +band hs7 p14.1 p14.1 37500000 43300000 gpos75 +band hs7 p13 p13 43300000 46600000 gneg +band hs7 p12.3 p12.3 46600000 49800000 gpos75 +band hs7 p12.2 p12.2 49800000 50900000 gneg +band hs7 p12.1 p12.1 50900000 53900000 gpos75 +band hs7 p11.2 p11.2 53900000 57400000 gneg +band hs7 p11.1 p11.1 57400000 59100000 acen +band hs7 q11.1 q11.1 59100000 61100000 acen +band hs7 q11.21 q11.21 61100000 66100000 gneg +band hs7 q11.22 q11.22 66100000 71800000 gpos50 +band hs7 q11.23 q11.23 71800000 77400000 gneg +band hs7 q21.11 q21.11 77400000 86200000 gpos100 +band hs7 q21.12 q21.12 86200000 88000000 gneg +band hs7 q21.13 q21.13 88000000 90900000 gpos75 +band hs7 q21.2 q21.2 90900000 92600000 gneg +band hs7 q21.3 q21.3 92600000 97900000 gpos75 +band hs7 q22.1 q22.1 97900000 104400000 gneg +band hs7 q22.2 q22.2 104400000 105900000 gpos50 +band hs7 q22.3 q22.3 105900000 107200000 gneg +band hs7 q31.1 q31.1 107200000 114400000 gpos75 +band hs7 q31.2 q31.2 114400000 117200000 gneg +band hs7 q31.31 q31.31 117200000 120900000 gpos75 +band hs7 q31.32 q31.32 120900000 123600000 gneg +band hs7 q31.33 q31.33 123600000 126900000 gpos75 +band hs7 q32.1 q32.1 126900000 129000000 gneg +band hs7 q32.2 q32.2 129000000 130100000 gpos25 +band hs7 q32.3 q32.3 130100000 132400000 gneg +band hs7 q33 q33 132400000 137300000 gpos50 +band hs7 q34 q34 137300000 142800000 gneg +band hs7 q35 q35 142800000 147500000 gpos75 +band hs7 q36.1 q36.1 147500000 152200000 gneg +band hs7 q36.2 q36.2 152200000 154700000 gpos25 +band hs7 q36.3 q36.3 154700000 158821424 gneg +band hs8 p23.3 p23.3 0 2200000 gneg +band hs8 p23.2 p23.2 2200000 6200000 gpos75 +band hs8 p23.1 p23.1 6200000 12700000 gneg +band hs8 p22 p22 12700000 19100000 gpos100 +band hs8 p21.3 p21.3 19100000 23400000 gneg +band hs8 p21.2 p21.2 23400000 27400000 gpos50 +band hs8 p21.1 p21.1 27400000 29700000 gneg +band hs8 p12 p12 29700000 38500000 gpos75 +band hs8 p11.23 p11.23 38500000 39500000 gneg +band hs8 p11.22 p11.22 39500000 39900000 gpos25 +band hs8 p11.21 p11.21 39900000 43200000 gneg +band hs8 p11.1 p11.1 43200000 45200000 acen +band hs8 q11.1 q11.1 45200000 48100000 acen +band hs8 q11.21 q11.21 48100000 50400000 gneg +band hs8 q11.22 q11.22 50400000 52800000 gpos75 +band hs8 q11.23 q11.23 52800000 55600000 gneg +band hs8 q12.1 q12.1 55600000 61700000 gpos50 +band hs8 q12.2 q12.2 61700000 62400000 gneg +band hs8 q12.3 q12.3 62400000 66100000 gpos50 +band hs8 q13.1 q13.1 66100000 68100000 gneg +band hs8 q13.2 q13.2 68100000 70600000 gpos50 +band hs8 q13.3 q13.3 70600000 74000000 gneg +band hs8 q21.11 q21.11 74000000 78500000 gpos100 +band hs8 q21.12 q21.12 78500000 80300000 gneg +band hs8 q21.13 q21.13 80300000 84900000 gpos75 +band hs8 q21.2 q21.2 84900000 87200000 gneg +band hs8 q21.3 q21.3 87200000 93500000 gpos100 +band hs8 q22.1 q22.1 93500000 99100000 gneg +band hs8 q22.2 q22.2 99100000 101600000 gpos25 +band hs8 q22.3 q22.3 101600000 106100000 gneg +band hs8 q23.1 q23.1 106100000 110600000 gpos75 +band hs8 q23.2 q23.2 110600000 112200000 gneg +band hs8 q23.3 q23.3 112200000 117700000 gpos100 +band hs8 q24.11 q24.11 117700000 119200000 gneg +band hs8 q24.12 q24.12 119200000 122500000 gpos50 +band hs8 q24.13 q24.13 122500000 127300000 gneg +band hs8 q24.21 q24.21 127300000 131500000 gpos50 +band hs8 q24.22 q24.22 131500000 136500000 gneg +band hs8 q24.23 q24.23 136500000 140000000 gpos75 +band hs8 q24.3 q24.3 140000000 146274826 gneg +band hs9 p24.3 p24.3 0 2200000 gneg +band hs9 p24.2 p24.2 2200000 4600000 gpos25 +band hs9 p24.1 p24.1 4600000 9000000 gneg +band hs9 p23 p23 9000000 14100000 gpos75 +band hs9 p22.3 p22.3 14100000 16600000 gneg +band hs9 p22.2 p22.2 16600000 18500000 gpos25 +band hs9 p22.1 p22.1 18500000 19900000 gneg +band hs9 p21.3 p21.3 19900000 25500000 gpos100 +band hs9 p21.2 p21.2 25500000 28100000 gneg +band hs9 p21.1 p21.1 28100000 32800000 gpos100 +band hs9 p13.3 p13.3 32800000 36300000 gneg +band hs9 p13.2 p13.2 36300000 38000000 gpos25 +band hs9 p13.1 p13.1 38000000 40200000 gneg +band hs9 p12 p12 40200000 42400000 gpos50 +band hs9 p11.2 p11.2 42400000 46700000 gneg +band hs9 p11.1 p11.1 46700000 51800000 acen +band hs9 q11 q11 51800000 60300000 acen +band hs9 q12 q12 60300000 70000000 gvar +band hs9 q13 q13 70000000 70500000 gneg +band hs9 q21.11 q21.11 70500000 72700000 gpos25 +band hs9 q21.12 q21.12 72700000 73100000 gneg +band hs9 q21.13 q21.13 73100000 79300000 gpos50 +band hs9 q21.2 q21.2 79300000 80300000 gneg +band hs9 q21.31 q21.31 80300000 83400000 gpos50 +band hs9 q21.32 q21.32 83400000 86100000 gneg +band hs9 q21.33 q21.33 86100000 89600000 gpos50 +band hs9 q22.1 q22.1 89600000 91000000 gneg +band hs9 q22.2 q22.2 91000000 93000000 gpos25 +band hs9 q22.31 q22.31 93000000 95600000 gneg +band hs9 q22.32 q22.32 95600000 98200000 gpos25 +band hs9 q22.33 q22.33 98200000 101600000 gneg +band hs9 q31.1 q31.1 101600000 107200000 gpos100 +band hs9 q31.2 q31.2 107200000 110300000 gneg +band hs9 q31.3 q31.3 110300000 113900000 gpos25 +band hs9 q32 q32 113900000 116700000 gneg +band hs9 q33.1 q33.1 116700000 122000000 gpos75 +band hs9 q33.2 q33.2 122000000 125800000 gneg +band hs9 q33.3 q33.3 125800000 129300000 gpos25 +band hs9 q34.11 q34.11 129300000 132500000 gneg +band hs9 q34.12 q34.12 132500000 132800000 gpos25 +band hs9 q34.13 q34.13 132800000 134900000 gneg +band hs9 q34.2 q34.2 134900000 136600000 gpos25 +band hs9 q34.3 q34.3 136600000 140273252 gneg +band hsX p22.33 p22.33 0 4300000 gneg +band hsX p22.32 p22.32 4300000 6000000 gpos50 +band hsX p22.31 p22.31 6000000 9500000 gneg +band hsX p22.2 p22.2 9500000 17100000 gpos50 +band hsX p22.13 p22.13 17100000 19200000 gneg +band hsX p22.12 p22.12 19200000 21800000 gpos50 +band hsX p22.11 p22.11 21800000 24900000 gneg +band hsX p21.3 p21.3 24900000 29400000 gpos100 +band hsX p21.2 p21.2 29400000 31500000 gneg +band hsX p21.1 p21.1 31500000 37500000 gpos100 +band hsX p11.4 p11.4 37500000 42300000 gneg +band hsX p11.3 p11.3 42300000 47300000 gpos75 +band hsX p11.23 p11.23 47300000 49700000 gneg +band hsX p11.22 p11.22 49700000 54700000 gpos25 +band hsX p11.21 p11.21 54700000 56600000 gneg +band hsX p11.1 p11.1 56600000 59500000 acen +band hsX q11.1 q11.1 59500000 65000000 acen +band hsX q11.2 q11.2 65000000 65100000 gneg +band hsX q12 q12 65100000 67700000 gpos50 +band hsX q13.1 q13.1 67700000 72200000 gneg +band hsX q13.2 q13.2 72200000 73800000 gpos50 +band hsX q13.3 q13.3 73800000 76000000 gneg +band hsX q21.1 q21.1 76000000 84500000 gpos100 +band hsX q21.2 q21.2 84500000 86200000 gneg +band hsX q21.31 q21.31 86200000 91900000 gpos100 +band hsX q21.32 q21.32 91900000 93500000 gneg +band hsX q21.33 q21.33 93500000 98200000 gpos75 +band hsX q22.1 q22.1 98200000 102500000 gneg +band hsX q22.2 q22.2 102500000 103600000 gpos50 +band hsX q22.3 q22.3 103600000 110500000 gneg +band hsX q23 q23 110500000 116800000 gpos75 +band hsX q24 q24 116800000 120700000 gneg +band hsX q25 q25 120700000 129800000 gpos100 +band hsX q26.1 q26.1 129800000 130300000 gneg +band hsX q26.2 q26.2 130300000 133500000 gpos25 +band hsX q26.3 q26.3 133500000 137800000 gneg +band hsX q27.1 q27.1 137800000 140100000 gpos75 +band hsX q27.2 q27.2 140100000 141900000 gneg +band hsX q27.3 q27.3 141900000 146900000 gpos100 +band hsX q28 q28 146900000 154913754 gneg +band hsY p11.32 p11.32 0 1700000 gneg +band hsY p11.31 p11.31 1700000 3300000 gpos50 +band hsY p11.2 p11.2 3300000 11200000 gneg +band hsY p11.1 p11.1 11200000 11300000 acen +band hsY q11.1 q11.1 11300000 12500000 acen +band hsY q11.21 q11.21 12500000 14300000 gneg +band hsY q11.221 q11.221 14300000 19000000 gpos50 +band hsY q11.222 q11.222 19000000 21300000 gneg +band hsY q11.223 q11.223 21300000 25400000 gpos50 +band hsY q11.23 q11.23 25400000 27200000 gneg +band hsY q12 q12 27200000 57772954 gvar diff -r a64dc31ab7f2 -r 740057a5126d karyotype/karyotype.human.hg19.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/karyotype/karyotype.human.hg19.txt Fri May 01 07:28:50 2020 -0400 @@ -0,0 +1,886 @@ +chr - hs1 1 0 249250621 chr1 +chr - hs2 2 0 243199373 chr2 +chr - hs3 3 0 198022430 chr3 +chr - hs4 4 0 191154276 chr4 +chr - hs5 5 0 180915260 chr5 +chr - hs6 6 0 171115067 chr6 +chr - hs7 7 0 159138663 chr7 +chr - hs8 8 0 146364022 chr8 +chr - hs9 9 0 141213431 chr9 +chr - hs10 10 0 135534747 chr10 +chr - hs11 11 0 135006516 chr11 +chr - hs12 12 0 133851895 chr12 +chr - hs13 13 0 115169878 chr13 +chr - hs14 14 0 107349540 chr14 +chr - hs15 15 0 102531392 chr15 +chr - hs16 16 0 90354753 chr16 +chr - hs17 17 0 81195210 chr17 +chr - hs18 18 0 78077248 chr18 +chr - hs19 19 0 59128983 chr19 +chr - hs20 20 0 63025520 chr20 +chr - hs21 21 0 48129895 chr21 +chr - hs22 22 0 51304566 chr22 +chr - hsX x 0 155270560 chrx +chr - hsY y 0 59373566 chry +band hs1 p36.33 p36.33 0 2300000 gneg +band hs1 p36.32 p36.32 2300000 5400000 gpos25 +band hs1 p36.31 p36.31 5400000 7200000 gneg +band hs1 p36.23 p36.23 7200000 9200000 gpos25 +band hs1 p36.22 p36.22 9200000 12700000 gneg +band hs1 p36.21 p36.21 12700000 16200000 gpos50 +band hs1 p36.13 p36.13 16200000 20400000 gneg +band hs1 p36.12 p36.12 20400000 23900000 gpos25 +band hs1 p36.11 p36.11 23900000 28000000 gneg +band hs1 p35.3 p35.3 28000000 30200000 gpos25 +band hs1 p35.2 p35.2 30200000 32400000 gneg +band hs1 p35.1 p35.1 32400000 34600000 gpos25 +band hs1 p34.3 p34.3 34600000 40100000 gneg +band hs1 p34.2 p34.2 40100000 44100000 gpos25 +band hs1 p34.1 p34.1 44100000 46800000 gneg +band hs1 p33 p33 46800000 50700000 gpos75 +band hs1 p32.3 p32.3 50700000 56100000 gneg +band hs1 p32.2 p32.2 56100000 59000000 gpos50 +band hs1 p32.1 p32.1 59000000 61300000 gneg +band hs1 p31.3 p31.3 61300000 68900000 gpos50 +band hs1 p31.2 p31.2 68900000 69700000 gneg +band hs1 p31.1 p31.1 69700000 84900000 gpos100 +band hs1 p22.3 p22.3 84900000 88400000 gneg +band hs1 p22.2 p22.2 88400000 92000000 gpos75 +band hs1 p22.1 p22.1 92000000 94700000 gneg +band hs1 p21.3 p21.3 94700000 99700000 gpos75 +band hs1 p21.2 p21.2 99700000 102200000 gneg +band hs1 p21.1 p21.1 102200000 107200000 gpos100 +band hs1 p13.3 p13.3 107200000 111800000 gneg +band hs1 p13.2 p13.2 111800000 116100000 gpos50 +band hs1 p13.1 p13.1 116100000 117800000 gneg +band hs1 p12 p12 117800000 120600000 gpos50 +band hs1 p11.2 p11.2 120600000 121500000 gneg +band hs1 p11.1 p11.1 121500000 125000000 acen +band hs1 q11 q11 125000000 128900000 acen +band hs1 q12 q12 128900000 142600000 gvar +band hs1 q21.1 q21.1 142600000 147000000 gneg +band hs1 q21.2 q21.2 147000000 150300000 gpos50 +band hs1 q21.3 q21.3 150300000 155000000 gneg +band hs1 q22 q22 155000000 156500000 gpos50 +band hs1 q23.1 q23.1 156500000 159100000 gneg +band hs1 q23.2 q23.2 159100000 160500000 gpos50 +band hs1 q23.3 q23.3 160500000 165500000 gneg +band hs1 q24.1 q24.1 165500000 167200000 gpos50 +band hs1 q24.2 q24.2 167200000 170900000 gneg +band hs1 q24.3 q24.3 170900000 172900000 gpos75 +band hs1 q25.1 q25.1 172900000 176000000 gneg +band hs1 q25.2 q25.2 176000000 180300000 gpos50 +band hs1 q25.3 q25.3 180300000 185800000 gneg +band hs1 q31.1 q31.1 185800000 190800000 gpos100 +band hs1 q31.2 q31.2 190800000 193800000 gneg +band hs1 q31.3 q31.3 193800000 198700000 gpos100 +band hs1 q32.1 q32.1 198700000 207200000 gneg +band hs1 q32.2 q32.2 207200000 211500000 gpos25 +band hs1 q32.3 q32.3 211500000 214500000 gneg +band hs1 q41 q41 214500000 224100000 gpos100 +band hs1 q42.11 q42.11 224100000 224600000 gneg +band hs1 q42.12 q42.12 224600000 227000000 gpos25 +band hs1 q42.13 q42.13 227000000 230700000 gneg +band hs1 q42.2 q42.2 230700000 234700000 gpos50 +band hs1 q42.3 q42.3 234700000 236600000 gneg +band hs1 q43 q43 236600000 243700000 gpos75 +band hs1 q44 q44 243700000 249250621 gneg +band hs10 p15.3 p15.3 0 3000000 gneg +band hs10 p15.2 p15.2 3000000 3800000 gpos25 +band hs10 p15.1 p15.1 3800000 6600000 gneg +band hs10 p14 p14 6600000 12200000 gpos75 +band hs10 p13 p13 12200000 17300000 gneg +band hs10 p12.33 p12.33 17300000 18600000 gpos75 +band hs10 p12.32 p12.32 18600000 18700000 gneg +band hs10 p12.31 p12.31 18700000 22600000 gpos75 +band hs10 p12.2 p12.2 22600000 24600000 gneg +band hs10 p12.1 p12.1 24600000 29600000 gpos50 +band hs10 p11.23 p11.23 29600000 31300000 gneg +band hs10 p11.22 p11.22 31300000 34400000 gpos25 +band hs10 p11.21 p11.21 34400000 38000000 gneg +band hs10 p11.1 p11.1 38000000 40200000 acen +band hs10 q11.1 q11.1 40200000 42300000 acen +band hs10 q11.21 q11.21 42300000 46100000 gneg +band hs10 q11.22 q11.22 46100000 49900000 gpos25 +band hs10 q11.23 q11.23 49900000 52900000 gneg +band hs10 q21.1 q21.1 52900000 61200000 gpos100 +band hs10 q21.2 q21.2 61200000 64500000 gneg +band hs10 q21.3 q21.3 64500000 70600000 gpos100 +band hs10 q22.1 q22.1 70600000 74900000 gneg +band hs10 q22.2 q22.2 74900000 77700000 gpos50 +band hs10 q22.3 q22.3 77700000 82000000 gneg +band hs10 q23.1 q23.1 82000000 87900000 gpos100 +band hs10 q23.2 q23.2 87900000 89500000 gneg +band hs10 q23.31 q23.31 89500000 92900000 gpos75 +band hs10 q23.32 q23.32 92900000 94100000 gneg +band hs10 q23.33 q23.33 94100000 97000000 gpos50 +band hs10 q24.1 q24.1 97000000 99300000 gneg +band hs10 q24.2 q24.2 99300000 101900000 gpos50 +band hs10 q24.31 q24.31 101900000 103000000 gneg +band hs10 q24.32 q24.32 103000000 104900000 gpos25 +band hs10 q24.33 q24.33 104900000 105800000 gneg +band hs10 q25.1 q25.1 105800000 111900000 gpos100 +band hs10 q25.2 q25.2 111900000 114900000 gneg +band hs10 q25.3 q25.3 114900000 119100000 gpos75 +band hs10 q26.11 q26.11 119100000 121700000 gneg +band hs10 q26.12 q26.12 121700000 123100000 gpos50 +band hs10 q26.13 q26.13 123100000 127500000 gneg +band hs10 q26.2 q26.2 127500000 130600000 gpos50 +band hs10 q26.3 q26.3 130600000 135534747 gneg +band hs11 p15.5 p15.5 0 2800000 gneg +band hs11 p15.4 p15.4 2800000 10700000 gpos50 +band hs11 p15.3 p15.3 10700000 12700000 gneg +band hs11 p15.2 p15.2 12700000 16200000 gpos50 +band hs11 p15.1 p15.1 16200000 21700000 gneg +band hs11 p14.3 p14.3 21700000 26100000 gpos100 +band hs11 p14.2 p14.2 26100000 27200000 gneg +band hs11 p14.1 p14.1 27200000 31000000 gpos75 +band hs11 p13 p13 31000000 36400000 gneg +band hs11 p12 p12 36400000 43500000 gpos100 +band hs11 p11.2 p11.2 43500000 48800000 gneg +band hs11 p11.12 p11.12 48800000 51600000 gpos75 +band hs11 p11.11 p11.11 51600000 53700000 acen +band hs11 q11 q11 53700000 55700000 acen +band hs11 q12.1 q12.1 55700000 59900000 gpos75 +band hs11 q12.2 q12.2 59900000 61700000 gneg +band hs11 q12.3 q12.3 61700000 63400000 gpos25 +band hs11 q13.1 q13.1 63400000 65900000 gneg +band hs11 q13.2 q13.2 65900000 68400000 gpos25 +band hs11 q13.3 q13.3 68400000 70400000 gneg +band hs11 q13.4 q13.4 70400000 75200000 gpos50 +band hs11 q13.5 q13.5 75200000 77100000 gneg +band hs11 q14.1 q14.1 77100000 85600000 gpos100 +band hs11 q14.2 q14.2 85600000 88300000 gneg +band hs11 q14.3 q14.3 88300000 92800000 gpos100 +band hs11 q21 q21 92800000 97200000 gneg +band hs11 q22.1 q22.1 97200000 102100000 gpos100 +band hs11 q22.2 q22.2 102100000 102900000 gneg +band hs11 q22.3 q22.3 102900000 110400000 gpos100 +band hs11 q23.1 q23.1 110400000 112500000 gneg +band hs11 q23.2 q23.2 112500000 114500000 gpos50 +band hs11 q23.3 q23.3 114500000 121200000 gneg +band hs11 q24.1 q24.1 121200000 123900000 gpos50 +band hs11 q24.2 q24.2 123900000 127800000 gneg +band hs11 q24.3 q24.3 127800000 130800000 gpos50 +band hs11 q25 q25 130800000 135006516 gneg +band hs12 p13.33 p13.33 0 3300000 gneg +band hs12 p13.32 p13.32 3300000 5400000 gpos25 +band hs12 p13.31 p13.31 5400000 10100000 gneg +band hs12 p13.2 p13.2 10100000 12800000 gpos75 +band hs12 p13.1 p13.1 12800000 14800000 gneg +band hs12 p12.3 p12.3 14800000 20000000 gpos100 +band hs12 p12.2 p12.2 20000000 21300000 gneg +band hs12 p12.1 p12.1 21300000 26500000 gpos100 +band hs12 p11.23 p11.23 26500000 27800000 gneg +band hs12 p11.22 p11.22 27800000 30700000 gpos50 +band hs12 p11.21 p11.21 30700000 33300000 gneg +band hs12 p11.1 p11.1 33300000 35800000 acen +band hs12 q11 q11 35800000 38200000 acen +band hs12 q12 q12 38200000 46400000 gpos100 +band hs12 q13.11 q13.11 46400000 49100000 gneg +band hs12 q13.12 q13.12 49100000 51500000 gpos25 +band hs12 q13.13 q13.13 51500000 54900000 gneg +band hs12 q13.2 q13.2 54900000 56600000 gpos25 +band hs12 q13.3 q13.3 56600000 58100000 gneg +band hs12 q14.1 q14.1 58100000 63100000 gpos75 +band hs12 q14.2 q14.2 63100000 65100000 gneg +band hs12 q14.3 q14.3 65100000 67700000 gpos50 +band hs12 q15 q15 67700000 71500000 gneg +band hs12 q21.1 q21.1 71500000 75700000 gpos75 +band hs12 q21.2 q21.2 75700000 80300000 gneg +band hs12 q21.31 q21.31 80300000 86700000 gpos100 +band hs12 q21.32 q21.32 86700000 89000000 gneg +band hs12 q21.33 q21.33 89000000 92600000 gpos100 +band hs12 q22 q22 92600000 96200000 gneg +band hs12 q23.1 q23.1 96200000 101600000 gpos75 +band hs12 q23.2 q23.2 101600000 103800000 gneg +band hs12 q23.3 q23.3 103800000 109000000 gpos50 +band hs12 q24.11 q24.11 109000000 111700000 gneg +band hs12 q24.12 q24.12 111700000 112300000 gpos25 +band hs12 q24.13 q24.13 112300000 114300000 gneg +band hs12 q24.21 q24.21 114300000 116800000 gpos50 +band hs12 q24.22 q24.22 116800000 118100000 gneg +band hs12 q24.23 q24.23 118100000 120700000 gpos50 +band hs12 q24.31 q24.31 120700000 125900000 gneg +band hs12 q24.32 q24.32 125900000 129300000 gpos50 +band hs12 q24.33 q24.33 129300000 133851895 gneg +band hs13 p13 p13 0 4500000 gvar +band hs13 p12 p12 4500000 10000000 stalk +band hs13 p11.2 p11.2 10000000 16300000 gvar +band hs13 p11.1 p11.1 16300000 17900000 acen +band hs13 q11 q11 17900000 19500000 acen +band hs13 q12.11 q12.11 19500000 23300000 gneg +band hs13 q12.12 q12.12 23300000 25500000 gpos25 +band hs13 q12.13 q12.13 25500000 27800000 gneg +band hs13 q12.2 q12.2 27800000 28900000 gpos25 +band hs13 q12.3 q12.3 28900000 32200000 gneg +band hs13 q13.1 q13.1 32200000 34000000 gpos50 +band hs13 q13.2 q13.2 34000000 35500000 gneg +band hs13 q13.3 q13.3 35500000 40100000 gpos75 +band hs13 q14.11 q14.11 40100000 45200000 gneg +band hs13 q14.12 q14.12 45200000 45800000 gpos25 +band hs13 q14.13 q14.13 45800000 47300000 gneg +band hs13 q14.2 q14.2 47300000 50900000 gpos50 +band hs13 q14.3 q14.3 50900000 55300000 gneg +band hs13 q21.1 q21.1 55300000 59600000 gpos100 +band hs13 q21.2 q21.2 59600000 62300000 gneg +band hs13 q21.31 q21.31 62300000 65700000 gpos75 +band hs13 q21.32 q21.32 65700000 68600000 gneg +band hs13 q21.33 q21.33 68600000 73300000 gpos100 +band hs13 q22.1 q22.1 73300000 75400000 gneg +band hs13 q22.2 q22.2 75400000 77200000 gpos50 +band hs13 q22.3 q22.3 77200000 79000000 gneg +band hs13 q31.1 q31.1 79000000 87700000 gpos100 +band hs13 q31.2 q31.2 87700000 90000000 gneg +band hs13 q31.3 q31.3 90000000 95000000 gpos100 +band hs13 q32.1 q32.1 95000000 98200000 gneg +band hs13 q32.2 q32.2 98200000 99300000 gpos25 +band hs13 q32.3 q32.3 99300000 101700000 gneg +band hs13 q33.1 q33.1 101700000 104800000 gpos100 +band hs13 q33.2 q33.2 104800000 107000000 gneg +band hs13 q33.3 q33.3 107000000 110300000 gpos100 +band hs13 q34 q34 110300000 115169878 gneg +band hs14 p13 p13 0 3700000 gvar +band hs14 p12 p12 3700000 8100000 stalk +band hs14 p11.2 p11.2 8100000 16100000 gvar +band hs14 p11.1 p11.1 16100000 17600000 acen +band hs14 q11.1 q11.1 17600000 19100000 acen +band hs14 q11.2 q11.2 19100000 24600000 gneg +band hs14 q12 q12 24600000 33300000 gpos100 +band hs14 q13.1 q13.1 33300000 35300000 gneg +band hs14 q13.2 q13.2 35300000 36600000 gpos50 +band hs14 q13.3 q13.3 36600000 37800000 gneg +band hs14 q21.1 q21.1 37800000 43500000 gpos100 +band hs14 q21.2 q21.2 43500000 47200000 gneg +band hs14 q21.3 q21.3 47200000 50900000 gpos100 +band hs14 q22.1 q22.1 50900000 54100000 gneg +band hs14 q22.2 q22.2 54100000 55500000 gpos25 +band hs14 q22.3 q22.3 55500000 58100000 gneg +band hs14 q23.1 q23.1 58100000 62100000 gpos75 +band hs14 q23.2 q23.2 62100000 64800000 gneg +band hs14 q23.3 q23.3 64800000 67900000 gpos50 +band hs14 q24.1 q24.1 67900000 70200000 gneg +band hs14 q24.2 q24.2 70200000 73800000 gpos50 +band hs14 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40100000 gpos75 +band hs15 q15.1 q15.1 40100000 42800000 gneg +band hs15 q15.2 q15.2 42800000 43600000 gpos25 +band hs15 q15.3 q15.3 43600000 44800000 gneg +band hs15 q21.1 q21.1 44800000 49500000 gpos75 +band hs15 q21.2 q21.2 49500000 52900000 gneg +band hs15 q21.3 q21.3 52900000 59100000 gpos75 +band hs15 q22.1 q22.1 59100000 59300000 gneg +band hs15 q22.2 q22.2 59300000 63700000 gpos25 +band hs15 q22.31 q22.31 63700000 67200000 gneg +band hs15 q22.32 q22.32 67200000 67300000 gpos25 +band hs15 q22.33 q22.33 67300000 67500000 gneg +band hs15 q23 q23 67500000 72700000 gpos25 +band hs15 q24.1 q24.1 72700000 75200000 gneg +band hs15 q24.2 q24.2 75200000 76600000 gpos25 +band hs15 q24.3 q24.3 76600000 78300000 gneg +band hs15 q25.1 q25.1 78300000 81700000 gpos50 +band hs15 q25.2 q25.2 81700000 85200000 gneg +band hs15 q25.3 q25.3 85200000 89100000 gpos50 +band hs15 q26.1 q26.1 89100000 94300000 gneg +band hs15 q26.2 q26.2 94300000 98500000 gpos50 +band hs15 q26.3 q26.3 98500000 102531392 gneg +band hs16 p13.3 p13.3 0 7900000 gneg +band hs16 p13.2 p13.2 7900000 10500000 gpos50 +band hs16 p13.13 p13.13 10500000 12600000 gneg +band hs16 p13.12 p13.12 12600000 14800000 gpos50 +band hs16 p13.11 p13.11 14800000 16800000 gneg +band hs16 p12.3 p12.3 16800000 21200000 gpos50 +band hs16 p12.2 p12.2 21200000 24200000 gneg +band hs16 p12.1 p12.1 24200000 28100000 gpos50 +band hs16 p11.2 p11.2 28100000 34600000 gneg +band hs16 p11.1 p11.1 34600000 36600000 acen +band hs16 q11.1 q11.1 36600000 38600000 acen +band hs16 q11.2 q11.2 38600000 47000000 gvar +band hs16 q12.1 q12.1 47000000 52600000 gneg +band hs16 q12.2 q12.2 52600000 56700000 gpos50 +band hs16 q13 q13 56700000 57400000 gneg +band hs16 q21 q21 57400000 66700000 gpos100 +band hs16 q22.1 q22.1 66700000 70800000 gneg +band hs16 q22.2 q22.2 70800000 72900000 gpos50 +band hs16 q22.3 q22.3 72900000 74100000 gneg +band hs16 q23.1 q23.1 74100000 79200000 gpos75 +band hs16 q23.2 q23.2 79200000 81700000 gneg +band hs16 q23.3 q23.3 81700000 84200000 gpos50 +band hs16 q24.1 q24.1 84200000 87100000 gneg +band hs16 q24.2 q24.2 87100000 88700000 gpos25 +band hs16 q24.3 q24.3 88700000 90354753 gneg +band hs17 p13.3 p13.3 0 3300000 gneg +band hs17 p13.2 p13.2 3300000 6500000 gpos50 +band hs17 p13.1 p13.1 6500000 10700000 gneg +band hs17 p12 p12 10700000 16000000 gpos75 +band hs17 p11.2 p11.2 16000000 22200000 gneg +band hs17 p11.1 p11.1 22200000 24000000 acen +band hs17 q11.1 q11.1 24000000 25800000 acen +band hs17 q11.2 q11.2 25800000 31800000 gneg +band hs17 q12 q12 31800000 38100000 gpos50 +band hs17 q21.1 q21.1 38100000 38400000 gneg +band hs17 q21.2 q21.2 38400000 40900000 gpos25 +band hs17 q21.31 q21.31 40900000 44900000 gneg +band hs17 q21.32 q21.32 44900000 47400000 gpos25 +band hs17 q21.33 q21.33 47400000 50200000 gneg +band hs17 q22 q22 50200000 57600000 gpos75 +band hs17 q23.1 q23.1 57600000 58300000 gneg +band hs17 q23.2 q23.2 58300000 61100000 gpos75 +band hs17 q23.3 q23.3 61100000 62600000 gneg +band hs17 q24.1 q24.1 62600000 64200000 gpos50 +band hs17 q24.2 q24.2 64200000 67100000 gneg +band hs17 q24.3 q24.3 67100000 70900000 gpos75 +band hs17 q25.1 q25.1 70900000 74800000 gneg +band hs17 q25.2 q25.2 74800000 75300000 gpos25 +band hs17 q25.3 q25.3 75300000 81195210 gneg +band hs18 p11.32 p11.32 0 2900000 gneg +band hs18 p11.31 p11.31 2900000 7100000 gpos50 +band hs18 p11.23 p11.23 7100000 8500000 gneg +band hs18 p11.22 p11.22 8500000 10900000 gpos25 +band hs18 p11.21 p11.21 10900000 15400000 gneg +band hs18 p11.1 p11.1 15400000 17200000 acen +band hs18 q11.1 q11.1 17200000 19000000 acen +band hs18 q11.2 q11.2 19000000 25000000 gneg +band hs18 q12.1 q12.1 25000000 32700000 gpos100 +band hs18 q12.2 q12.2 32700000 37200000 gneg +band hs18 q12.3 q12.3 37200000 43500000 gpos75 +band hs18 q21.1 q21.1 43500000 48200000 gneg +band hs18 q21.2 q21.2 48200000 53800000 gpos75 +band hs18 q21.31 q21.31 53800000 56200000 gneg +band hs18 q21.32 q21.32 56200000 59000000 gpos50 +band hs18 q21.33 q21.33 59000000 61600000 gneg +band hs18 q22.1 q22.1 61600000 66800000 gpos100 +band hs18 q22.2 q22.2 66800000 68700000 gneg +band hs18 q22.3 q22.3 68700000 73100000 gpos25 +band hs18 q23 q23 73100000 78077248 gneg +band hs19 p13.3 p13.3 0 6900000 gneg +band hs19 p13.2 p13.2 6900000 13900000 gpos25 +band hs19 p13.13 p13.13 13900000 14000000 gneg +band hs19 p13.12 p13.12 14000000 16300000 gpos25 +band hs19 p13.11 p13.11 16300000 20000000 gneg +band hs19 p12 p12 20000000 24400000 gvar +band hs19 p11 p11 24400000 26500000 acen +band hs19 q11 q11 26500000 28600000 acen +band hs19 q12 q12 28600000 32400000 gvar +band hs19 q13.11 q13.11 32400000 35500000 gneg +band hs19 q13.12 q13.12 35500000 38300000 gpos25 +band hs19 q13.13 q13.13 38300000 38700000 gneg +band hs19 q13.2 q13.2 38700000 43400000 gpos25 +band hs19 q13.31 q13.31 43400000 45200000 gneg +band hs19 q13.32 q13.32 45200000 48000000 gpos25 +band hs19 q13.33 q13.33 48000000 51400000 gneg +band hs19 q13.41 q13.41 51400000 53600000 gpos25 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hs20 p13 p13 0 5100000 gneg +band hs20 p12.3 p12.3 5100000 9200000 gpos75 +band hs20 p12.2 p12.2 9200000 12100000 gneg +band hs20 p12.1 p12.1 12100000 17900000 gpos75 +band hs20 p11.23 p11.23 17900000 21300000 gneg +band hs20 p11.22 p11.22 21300000 22300000 gpos25 +band hs20 p11.21 p11.21 22300000 25600000 gneg +band hs20 p11.1 p11.1 25600000 27500000 acen +band hs20 q11.1 q11.1 27500000 29400000 acen +band hs20 q11.21 q11.21 29400000 32100000 gneg +band hs20 q11.22 q11.22 32100000 34400000 gpos25 +band hs20 q11.23 q11.23 34400000 37600000 gneg +band hs20 q12 q12 37600000 41700000 gpos75 +band hs20 q13.11 q13.11 41700000 42100000 gneg +band hs20 q13.12 q13.12 42100000 46400000 gpos25 +band hs20 q13.13 q13.13 46400000 49800000 gneg +band hs20 q13.2 q13.2 49800000 55000000 gpos75 +band hs20 q13.31 q13.31 55000000 56500000 gneg +band hs20 q13.32 q13.32 56500000 58400000 gpos50 +band hs20 q13.33 q13.33 58400000 63025520 gneg +band hs21 p13 p13 0 2800000 gvar +band hs21 p12 p12 2800000 6800000 stalk +band hs21 p11.2 p11.2 6800000 10900000 gvar +band hs21 p11.1 p11.1 10900000 13200000 acen +band hs21 q11.1 q11.1 13200000 14300000 acen +band hs21 q11.2 q11.2 14300000 16400000 gneg +band hs21 q21.1 q21.1 16400000 24000000 gpos100 +band hs21 q21.2 q21.2 24000000 26800000 gneg +band hs21 q21.3 q21.3 26800000 31500000 gpos75 +band hs21 q22.11 q22.11 31500000 35800000 gneg +band hs21 q22.12 q22.12 35800000 37800000 gpos50 +band hs21 q22.13 q22.13 37800000 39700000 gneg +band hs21 q22.2 q22.2 39700000 42600000 gpos50 +band hs21 q22.3 q22.3 42600000 48129895 gneg +band hs22 p13 p13 0 3800000 gvar +band hs22 p12 p12 3800000 8300000 stalk +band hs22 p11.2 p11.2 8300000 12200000 gvar +band hs22 p11.1 p11.1 12200000 14700000 acen +band hs22 q11.1 q11.1 14700000 17900000 acen +band hs22 q11.21 q11.21 17900000 22200000 gneg +band hs22 q11.22 q11.22 22200000 23500000 gpos25 +band hs22 q11.23 q11.23 23500000 25900000 gneg +band hs22 q12.1 q12.1 25900000 29600000 gpos50 +band hs22 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gpos50 +band hs3 p21.31 p21.31 44200000 50600000 gneg +band hs3 p21.2 p21.2 50600000 52300000 gpos25 +band hs3 p21.1 p21.1 52300000 54400000 gneg +band hs3 p14.3 p14.3 54400000 58600000 gpos50 +band hs3 p14.2 p14.2 58600000 63700000 gneg +band hs3 p14.1 p14.1 63700000 69800000 gpos50 +band hs3 p13 p13 69800000 74200000 gneg +band hs3 p12.3 p12.3 74200000 79800000 gpos75 +band hs3 p12.2 p12.2 79800000 83500000 gneg +band hs3 p12.1 p12.1 83500000 87200000 gpos75 +band hs3 p11.2 p11.2 87200000 87900000 gneg +band hs3 p11.1 p11.1 87900000 91000000 acen +band hs3 q11.1 q11.1 91000000 93900000 acen +band hs3 q11.2 q11.2 93900000 98300000 gvar +band hs3 q12.1 q12.1 98300000 100000000 gneg +band hs3 q12.2 q12.2 100000000 100900000 gpos25 +band hs3 q12.3 q12.3 100900000 102800000 gneg +band hs3 q13.11 q13.11 102800000 106200000 gpos75 +band hs3 q13.12 q13.12 106200000 107900000 gneg +band hs3 q13.13 q13.13 107900000 111300000 gpos50 +band hs3 q13.2 q13.2 111300000 113500000 gneg +band hs3 q13.31 q13.31 113500000 117300000 gpos75 +band hs3 q13.32 q13.32 117300000 119000000 gneg +band hs3 q13.33 q13.33 119000000 121900000 gpos75 +band hs3 q21.1 q21.1 121900000 123800000 gneg +band hs3 q21.2 q21.2 123800000 125800000 gpos25 +band hs3 q21.3 q21.3 125800000 129200000 gneg +band hs3 q22.1 q22.1 129200000 133700000 gpos25 +band hs3 q22.2 q22.2 133700000 135700000 gneg +band hs3 q22.3 q22.3 135700000 138700000 gpos25 +band hs3 q23 q23 138700000 142800000 gneg +band hs3 q24 q24 142800000 148900000 gpos100 +band hs3 q25.1 q25.1 148900000 152100000 gneg +band hs3 q25.2 q25.2 152100000 155000000 gpos50 +band hs3 q25.31 q25.31 155000000 157000000 gneg +band hs3 q25.32 q25.32 157000000 159000000 gpos50 +band hs3 q25.33 q25.33 159000000 160700000 gneg +band hs3 q26.1 q26.1 160700000 167600000 gpos100 +band hs3 q26.2 q26.2 167600000 170900000 gneg +band hs3 q26.31 q26.31 170900000 175700000 gpos75 +band hs3 q26.32 q26.32 175700000 179000000 gneg +band hs3 q26.33 q26.33 179000000 182700000 gpos75 +band hs3 q27.1 q27.1 182700000 184500000 gneg +band hs3 q27.2 q27.2 184500000 186000000 gpos25 +band hs3 q27.3 q27.3 186000000 187900000 gneg +band hs3 q28 q28 187900000 192300000 gpos75 +band hs3 q29 q29 192300000 198022430 gneg +band hs4 p16.3 p16.3 0 4500000 gneg +band hs4 p16.2 p16.2 4500000 6000000 gpos25 +band hs4 p16.1 p16.1 6000000 11300000 gneg +band hs4 p15.33 p15.33 11300000 15200000 gpos50 +band hs4 p15.32 p15.32 15200000 17800000 gneg +band hs4 p15.31 p15.31 17800000 21300000 gpos75 +band hs4 p15.2 p15.2 21300000 27700000 gneg +band hs4 p15.1 p15.1 27700000 35800000 gpos100 +band hs4 p14 p14 35800000 41200000 gneg +band hs4 p13 p13 41200000 44600000 gpos50 +band hs4 p12 p12 44600000 48200000 gneg +band hs4 p11 p11 48200000 50400000 acen +band hs4 q11 q11 50400000 52700000 acen +band hs4 q12 q12 52700000 59500000 gneg +band hs4 q13.1 q13.1 59500000 66600000 gpos100 +band hs4 q13.2 q13.2 66600000 70500000 gneg +band hs4 q13.3 q13.3 70500000 76300000 gpos75 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q32.1 155600000 161800000 gpos100 +band hs4 q32.2 q32.2 161800000 164500000 gneg +band hs4 q32.3 q32.3 164500000 170100000 gpos100 +band hs4 q33 q33 170100000 171900000 gneg +band hs4 q34.1 q34.1 171900000 176300000 gpos75 +band hs4 q34.2 q34.2 176300000 177500000 gneg +band hs4 q34.3 q34.3 177500000 183200000 gpos100 +band hs4 q35.1 q35.1 183200000 187100000 gneg +band hs4 q35.2 q35.2 187100000 191154276 gpos25 +band hs5 p15.33 p15.33 0 4500000 gneg +band hs5 p15.32 p15.32 4500000 6300000 gpos25 +band hs5 p15.31 p15.31 6300000 9800000 gneg +band hs5 p15.2 p15.2 9800000 15000000 gpos50 +band hs5 p15.1 p15.1 15000000 18400000 gneg +band hs5 p14.3 p14.3 18400000 23300000 gpos100 +band hs5 p14.2 p14.2 23300000 24600000 gneg +band hs5 p14.1 p14.1 24600000 28900000 gpos100 +band hs5 p13.3 p13.3 28900000 33800000 gneg +band hs5 p13.2 p13.2 33800000 38400000 gpos25 +band hs5 p13.1 p13.1 38400000 42500000 gneg +band hs5 p12 p12 42500000 46100000 gpos50 +band hs5 p11 p11 46100000 48400000 acen +band hs5 q11.1 q11.1 48400000 50700000 acen +band hs5 q11.2 q11.2 50700000 58900000 gneg +band hs5 q12.1 q12.1 58900000 62900000 gpos75 +band hs5 q12.2 q12.2 62900000 63200000 gneg +band hs5 q12.3 q12.3 63200000 66700000 gpos75 +band hs5 q13.1 q13.1 66700000 68400000 gneg +band hs5 q13.2 q13.2 68400000 73300000 gpos50 +band hs5 q13.3 q13.3 73300000 76900000 gneg +band hs5 q14.1 q14.1 76900000 81400000 gpos50 +band hs5 q14.2 q14.2 81400000 82800000 gneg +band hs5 q14.3 q14.3 82800000 92300000 gpos100 +band hs5 q15 q15 92300000 98200000 gneg +band hs5 q21.1 q21.1 98200000 102800000 gpos100 +band hs5 q21.2 q21.2 102800000 104500000 gneg +band hs5 q21.3 q21.3 104500000 109600000 gpos100 +band hs5 q22.1 q22.1 109600000 111500000 gneg +band hs5 q22.2 q22.2 111500000 113100000 gpos50 +band hs5 q22.3 q22.3 113100000 115200000 gneg +band hs5 q23.1 q23.1 115200000 121400000 gpos100 +band hs5 q23.2 q23.2 121400000 127300000 gneg +band hs5 q23.3 q23.3 127300000 130600000 gpos100 +band hs5 q31.1 q31.1 130600000 136200000 gneg +band hs5 q31.2 q31.2 136200000 139500000 gpos25 +band hs5 q31.3 q31.3 139500000 144500000 gneg +band hs5 q32 q32 144500000 149800000 gpos75 +band hs5 q33.1 q33.1 149800000 152700000 gneg +band hs5 q33.2 q33.2 152700000 155700000 gpos50 +band hs5 q33.3 q33.3 155700000 159900000 gneg +band hs5 q34 q34 159900000 168500000 gpos100 +band hs5 q35.1 q35.1 168500000 172800000 gneg +band hs5 q35.2 q35.2 172800000 176600000 gpos25 +band hs5 q35.3 q35.3 176600000 180915260 gneg +band hs6 p25.3 p25.3 0 2300000 gneg +band hs6 p25.2 p25.2 2300000 4200000 gpos25 +band hs6 p25.1 p25.1 4200000 7100000 gneg +band hs6 p24.3 p24.3 7100000 10600000 gpos50 +band hs6 p24.2 p24.2 10600000 11600000 gneg +band hs6 p24.1 p24.1 11600000 13400000 gpos25 +band hs6 p23 p23 13400000 15200000 gneg +band hs6 p22.3 p22.3 15200000 25200000 gpos75 +band hs6 p22.2 p22.2 25200000 27000000 gneg +band hs6 p22.1 p22.1 27000000 30400000 gpos50 +band hs6 p21.33 p21.33 30400000 32100000 gneg +band hs6 p21.32 p21.32 32100000 33500000 gpos25 +band hs6 p21.31 p21.31 33500000 36600000 gneg +band hs6 p21.2 p21.2 36600000 40500000 gpos25 +band hs6 p21.1 p21.1 40500000 46200000 gneg +band hs6 p12.3 p12.3 46200000 51800000 gpos100 +band hs6 p12.2 p12.2 51800000 52900000 gneg +band hs6 p12.1 p12.1 52900000 57000000 gpos100 +band hs6 p11.2 p11.2 57000000 58700000 gneg +band hs6 p11.1 p11.1 58700000 61000000 acen +band hs6 q11.1 q11.1 61000000 63300000 acen +band hs6 q11.2 q11.2 63300000 63400000 gneg +band hs6 q12 q12 63400000 70000000 gpos100 +band hs6 q13 q13 70000000 75900000 gneg +band hs6 q14.1 q14.1 75900000 83900000 gpos50 +band hs6 q14.2 q14.2 83900000 84900000 gneg +band hs6 q14.3 q14.3 84900000 88000000 gpos50 +band hs6 q15 q15 88000000 93100000 gneg +band hs6 q16.1 q16.1 93100000 99500000 gpos100 +band hs6 q16.2 q16.2 99500000 100600000 gneg +band hs6 q16.3 q16.3 100600000 105500000 gpos100 +band hs6 q21 q21 105500000 114600000 gneg +band hs6 q22.1 q22.1 114600000 118300000 gpos75 +band hs6 q22.2 q22.2 118300000 118500000 gneg +band hs6 q22.31 q22.31 118500000 126100000 gpos100 +band hs6 q22.32 q22.32 126100000 127100000 gneg +band hs6 q22.33 q22.33 127100000 130300000 gpos75 +band hs6 q23.1 q23.1 130300000 131200000 gneg +band hs6 q23.2 q23.2 131200000 135200000 gpos50 +band hs6 q23.3 q23.3 135200000 139000000 gneg +band hs6 q24.1 q24.1 139000000 142800000 gpos75 +band hs6 q24.2 q24.2 142800000 145600000 gneg +band hs6 q24.3 q24.3 145600000 149000000 gpos75 +band hs6 q25.1 q25.1 149000000 152500000 gneg +band hs6 q25.2 q25.2 152500000 155500000 gpos50 +band hs6 q25.3 q25.3 155500000 161000000 gneg +band hs6 q26 q26 161000000 164500000 gpos50 +band hs6 q27 q27 164500000 171115067 gneg +band hs7 p22.3 p22.3 0 2800000 gneg +band hs7 p22.2 p22.2 2800000 4500000 gpos25 +band hs7 p22.1 p22.1 4500000 7300000 gneg +band hs7 p21.3 p21.3 7300000 13800000 gpos100 +band hs7 p21.2 p21.2 13800000 16500000 gneg +band hs7 p21.1 p21.1 16500000 20900000 gpos100 +band hs7 p15.3 p15.3 20900000 25500000 gneg +band hs7 p15.2 p15.2 25500000 28000000 gpos50 +band hs7 p15.1 p15.1 28000000 28800000 gneg +band hs7 p14.3 p14.3 28800000 35000000 gpos75 +band hs7 p14.2 p14.2 35000000 37200000 gneg +band hs7 p14.1 p14.1 37200000 43300000 gpos75 +band hs7 p13 p13 43300000 45400000 gneg +band hs7 p12.3 p12.3 45400000 49000000 gpos75 +band hs7 p12.2 p12.2 49000000 50500000 gneg +band hs7 p12.1 p12.1 50500000 54000000 gpos75 +band hs7 p11.2 p11.2 54000000 58000000 gneg +band hs7 p11.1 p11.1 58000000 59900000 acen +band hs7 q11.1 q11.1 59900000 61700000 acen +band hs7 q11.21 q11.21 61700000 67000000 gneg +band hs7 q11.22 q11.22 67000000 72200000 gpos50 +band hs7 q11.23 q11.23 72200000 77500000 gneg +band hs7 q21.11 q21.11 77500000 86400000 gpos100 +band hs7 q21.12 q21.12 86400000 88200000 gneg +band hs7 q21.13 q21.13 88200000 91100000 gpos75 +band hs7 q21.2 q21.2 91100000 92800000 gneg +band hs7 q21.3 q21.3 92800000 98000000 gpos75 +band hs7 q22.1 q22.1 98000000 103800000 gneg +band hs7 q22.2 q22.2 103800000 104500000 gpos50 +band hs7 q22.3 q22.3 104500000 107400000 gneg +band hs7 q31.1 q31.1 107400000 114600000 gpos75 +band hs7 q31.2 q31.2 114600000 117400000 gneg +band hs7 q31.31 q31.31 117400000 121100000 gpos75 +band hs7 q31.32 q31.32 121100000 123800000 gneg +band hs7 q31.33 q31.33 123800000 127100000 gpos75 +band hs7 q32.1 q32.1 127100000 129200000 gneg +band hs7 q32.2 q32.2 129200000 130400000 gpos25 +band hs7 q32.3 q32.3 130400000 132600000 gneg +band hs7 q33 q33 132600000 138200000 gpos50 +band hs7 q34 q34 138200000 143100000 gneg +band hs7 q35 q35 143100000 147900000 gpos75 +band hs7 q36.1 q36.1 147900000 152600000 gneg +band hs7 q36.2 q36.2 152600000 155100000 gpos25 +band hs7 q36.3 q36.3 155100000 159138663 gneg +band hs8 p23.3 p23.3 0 2200000 gneg +band hs8 p23.2 p23.2 2200000 6200000 gpos75 +band hs8 p23.1 p23.1 6200000 12700000 gneg +band hs8 p22 p22 12700000 19000000 gpos100 +band hs8 p21.3 p21.3 19000000 23300000 gneg +band hs8 p21.2 p21.2 23300000 27400000 gpos50 +band hs8 p21.1 p21.1 27400000 28800000 gneg +band hs8 p12 p12 28800000 36500000 gpos75 +band hs8 p11.23 p11.23 36500000 38300000 gneg +band hs8 p11.22 p11.22 38300000 39700000 gpos25 +band hs8 p11.21 p11.21 39700000 43100000 gneg +band hs8 p11.1 p11.1 43100000 45600000 acen +band hs8 q11.1 q11.1 45600000 48100000 acen +band hs8 q11.21 q11.21 48100000 52200000 gneg +band hs8 q11.22 q11.22 52200000 52600000 gpos75 +band hs8 q11.23 q11.23 52600000 55500000 gneg +band hs8 q12.1 q12.1 55500000 61600000 gpos50 +band hs8 q12.2 q12.2 61600000 62200000 gneg +band hs8 q12.3 q12.3 62200000 66000000 gpos50 +band hs8 q13.1 q13.1 66000000 68000000 gneg +band hs8 q13.2 q13.2 68000000 70500000 gpos50 +band hs8 q13.3 q13.3 70500000 73900000 gneg +band hs8 q21.11 q21.11 73900000 78300000 gpos100 +band hs8 q21.12 q21.12 78300000 80100000 gneg +band hs8 q21.13 q21.13 80100000 84600000 gpos75 +band hs8 q21.2 q21.2 84600000 86900000 gneg +band hs8 q21.3 q21.3 86900000 93300000 gpos100 +band hs8 q22.1 q22.1 93300000 99000000 gneg +band hs8 q22.2 q22.2 99000000 101600000 gpos25 +band hs8 q22.3 q22.3 101600000 106200000 gneg +band hs8 q23.1 q23.1 106200000 110500000 gpos75 +band hs8 q23.2 q23.2 110500000 112100000 gneg +band hs8 q23.3 q23.3 112100000 117700000 gpos100 +band hs8 q24.11 q24.11 117700000 119200000 gneg +band hs8 q24.12 q24.12 119200000 122500000 gpos50 +band hs8 q24.13 q24.13 122500000 127300000 gneg +band hs8 q24.21 q24.21 127300000 131500000 gpos50 +band hs8 q24.22 q24.22 131500000 136400000 gneg +band hs8 q24.23 q24.23 136400000 139900000 gpos75 +band hs8 q24.3 q24.3 139900000 146364022 gneg +band hs9 p24.3 p24.3 0 2200000 gneg +band hs9 p24.2 p24.2 2200000 4600000 gpos25 +band hs9 p24.1 p24.1 4600000 9000000 gneg +band hs9 p23 p23 9000000 14200000 gpos75 +band hs9 p22.3 p22.3 14200000 16600000 gneg +band hs9 p22.2 p22.2 16600000 18500000 gpos25 +band hs9 p22.1 p22.1 18500000 19900000 gneg +band hs9 p21.3 p21.3 19900000 25600000 gpos100 +band hs9 p21.2 p21.2 25600000 28000000 gneg +band hs9 p21.1 p21.1 28000000 33200000 gpos100 +band hs9 p13.3 p13.3 33200000 36300000 gneg +band hs9 p13.2 p13.2 36300000 38400000 gpos25 +band hs9 p13.1 p13.1 38400000 41000000 gneg +band hs9 p12 p12 41000000 43600000 gpos50 +band hs9 p11.2 p11.2 43600000 47300000 gneg +band hs9 p11.1 p11.1 47300000 49000000 acen +band hs9 q11 q11 49000000 50700000 acen +band hs9 q12 q12 50700000 65900000 gvar +band hs9 q13 q13 65900000 68700000 gneg +band hs9 q21.11 q21.11 68700000 72200000 gpos25 +band hs9 q21.12 q21.12 72200000 74000000 gneg +band hs9 q21.13 q21.13 74000000 79200000 gpos50 +band hs9 q21.2 q21.2 79200000 81100000 gneg +band hs9 q21.31 q21.31 81100000 84100000 gpos50 +band hs9 q21.32 q21.32 84100000 86900000 gneg +band hs9 q21.33 q21.33 86900000 90400000 gpos50 +band hs9 q22.1 q22.1 90400000 91800000 gneg +band hs9 q22.2 q22.2 91800000 93900000 gpos25 +band hs9 q22.31 q22.31 93900000 96600000 gneg +band hs9 q22.32 q22.32 96600000 99300000 gpos25 +band hs9 q22.33 q22.33 99300000 102600000 gneg +band hs9 q31.1 q31.1 102600000 108200000 gpos100 +band hs9 q31.2 q31.2 108200000 111300000 gneg +band hs9 q31.3 q31.3 111300000 114900000 gpos25 +band hs9 q32 q32 114900000 117700000 gneg +band hs9 q33.1 q33.1 117700000 122500000 gpos75 +band hs9 q33.2 q33.2 122500000 125800000 gneg +band hs9 q33.3 q33.3 125800000 130300000 gpos25 +band hs9 q34.11 q34.11 130300000 133500000 gneg +band hs9 q34.12 q34.12 133500000 134000000 gpos25 +band hs9 q34.13 q34.13 134000000 135900000 gneg +band hs9 q34.2 q34.2 135900000 137400000 gpos25 +band hs9 q34.3 q34.3 137400000 141213431 gneg +band hsX p22.33 p22.33 0 4300000 gneg +band hsX p22.32 p22.32 4300000 6000000 gpos50 +band hsX p22.31 p22.31 6000000 9500000 gneg +band hsX p22.2 p22.2 9500000 17100000 gpos50 +band hsX p22.13 p22.13 17100000 19300000 gneg +band hsX p22.12 p22.12 19300000 21900000 gpos50 +band hsX p22.11 p22.11 21900000 24900000 gneg +band hsX p21.3 p21.3 24900000 29300000 gpos100 +band hsX p21.2 p21.2 29300000 31500000 gneg +band hsX p21.1 p21.1 31500000 37600000 gpos100 +band hsX p11.4 p11.4 37600000 42400000 gneg +band hsX p11.3 p11.3 42400000 46400000 gpos75 +band hsX p11.23 p11.23 46400000 49800000 gneg +band hsX p11.22 p11.22 49800000 54800000 gpos25 +band hsX p11.21 p11.21 54800000 58100000 gneg +band hsX p11.1 p11.1 58100000 60600000 acen +band hsX q11.1 q11.1 60600000 63000000 acen +band hsX q11.2 q11.2 63000000 64600000 gneg +band hsX q12 q12 64600000 67800000 gpos50 +band hsX q13.1 q13.1 67800000 71800000 gneg +band hsX q13.2 q13.2 71800000 73900000 gpos50 +band hsX q13.3 q13.3 73900000 76000000 gneg +band hsX q21.1 q21.1 76000000 84600000 gpos100 +band hsX q21.2 q21.2 84600000 86200000 gneg +band hsX q21.31 q21.31 86200000 91800000 gpos100 +band hsX q21.32 q21.32 91800000 93500000 gneg +band hsX q21.33 q21.33 93500000 98300000 gpos75 +band hsX q22.1 q22.1 98300000 102600000 gneg +band hsX q22.2 q22.2 102600000 103700000 gpos50 +band hsX q22.3 q22.3 103700000 108700000 gneg +band hsX q23 q23 108700000 116500000 gpos75 +band hsX q24 q24 116500000 120900000 gneg +band hsX q25 q25 120900000 128700000 gpos100 +band hsX q26.1 q26.1 128700000 130400000 gneg +band hsX q26.2 q26.2 130400000 133600000 gpos25 +band hsX q26.3 q26.3 133600000 138000000 gneg +band hsX q27.1 q27.1 138000000 140300000 gpos75 +band hsX q27.2 q27.2 140300000 142100000 gneg +band hsX q27.3 q27.3 142100000 147100000 gpos100 +band hsX q28 q28 147100000 155270560 gneg +band hsY p11.32 p11.32 0 2500000 gneg +band hsY p11.31 p11.31 2500000 3000000 gpos50 +band hsY p11.2 p11.2 3000000 11600000 gneg +band hsY p11.1 p11.1 11600000 12500000 acen +band hsY q11.1 q11.1 12500000 13400000 acen +band hsY q11.21 q11.21 13400000 15100000 gneg +band hsY q11.221 q11.221 15100000 19800000 gpos50 +band hsY q11.222 q11.222 19800000 22100000 gneg +band hsY q11.223 q11.223 22100000 26200000 gpos50 +band hsY q11.23 q11.23 26200000 28800000 gneg +band hsY q12 q12 28800000 59373566 gvar diff -r a64dc31ab7f2 -r 740057a5126d karyotype/karyotype.human.hg38.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/karyotype/karyotype.human.hg38.txt Fri May 01 07:28:50 2020 -0400 @@ -0,0 +1,888 @@ +chr - hs1 1 0 248956422 chr1 +chr - hs2 2 0 242193529 chr2 +chr - hs3 3 0 198295559 chr3 +chr - hs4 4 0 190214555 chr4 +chr - hs5 5 0 181538259 chr5 +chr - hs6 6 0 170805979 chr6 +chr - hs7 7 0 159345973 chr7 +chr - hs8 8 0 145138636 chr8 +chr - hs9 9 0 138394717 chr9 +chr - hs10 10 0 133797422 chr10 +chr - hs11 11 0 135086622 chr11 +chr - hs12 12 0 133275309 chr12 +chr - hs13 13 0 114364328 chr13 +chr - hs14 14 0 107043718 chr14 +chr - hs15 15 0 101991189 chr15 +chr - hs16 16 0 90338345 chr16 +chr - hs17 17 0 83257441 chr17 +chr - hs18 18 0 80373285 chr18 +chr - hs19 19 0 58617616 chr19 +chr - hs20 20 0 64444167 chr20 +chr - hs21 21 0 46709983 chr21 +chr - hs22 22 0 50818468 chr22 +chr - hsX X 0 156040895 chrx +chr - hsY Y 0 57227415 chry +#chr - hsM M 0 16569 chrm +band hs1 p36.33 p36.33 0 2300000 gneg +band hs1 p36.32 p36.32 2300000 5300000 gpos25 +band hs1 p36.31 p36.31 5300000 7100000 gneg +band hs1 p36.23 p36.23 7100000 9100000 gpos25 +band hs1 p36.22 p36.22 9100000 12500000 gneg +band hs1 p36.21 p36.21 12500000 15900000 gpos50 +band hs1 p36.13 p36.13 15900000 20100000 gneg +band hs1 p36.12 p36.12 20100000 23600000 gpos25 +band hs1 p36.11 p36.11 23600000 27600000 gneg +band hs1 p35.3 p35.3 27600000 29900000 gpos25 +band hs1 p35.2 p35.2 29900000 32300000 gneg +band hs1 p35.1 p35.1 32300000 34300000 gpos25 +band hs1 p34.3 p34.3 34300000 39600000 gneg +band hs1 p34.2 p34.2 39600000 43700000 gpos25 +band hs1 p34.1 p34.1 43700000 46300000 gneg +band hs1 p33 p33 46300000 50200000 gpos75 +band hs1 p32.3 p32.3 50200000 55600000 gneg +band hs1 p32.2 p32.2 55600000 58500000 gpos50 +band hs1 p32.1 p32.1 58500000 60800000 gneg +band hs1 p31.3 p31.3 60800000 68500000 gpos50 +band hs1 p31.2 p31.2 68500000 69300000 gneg +band hs1 p31.1 p31.1 69300000 84400000 gpos100 +band hs1 p22.3 p22.3 84400000 87900000 gneg +band hs1 p22.2 p22.2 87900000 91500000 gpos75 +band hs1 p22.1 p22.1 91500000 94300000 gneg +band hs1 p21.3 p21.3 94300000 99300000 gpos75 +band hs1 p21.2 p21.2 99300000 101800000 gneg +band hs1 p21.1 p21.1 101800000 106700000 gpos100 +band hs1 p13.3 p13.3 106700000 111200000 gneg +band hs1 p13.2 p13.2 111200000 115500000 gpos50 +band hs1 p13.1 p13.1 115500000 117200000 gneg +band hs1 p12 p12 117200000 120400000 gpos50 +band hs1 p11.2 p11.2 120400000 121700000 gneg +band hs1 p11.1 p11.1 121700000 123400000 acen +band hs1 q11 q11 123400000 125100000 acen +band hs1 q12 q12 125100000 143200000 gvar +band hs1 q21.1 q21.1 143200000 147500000 gneg +band hs1 q21.2 q21.2 147500000 150600000 gpos50 +band hs1 q21.3 q21.3 150600000 155100000 gneg +band hs1 q22 q22 155100000 156600000 gpos50 +band hs1 q23.1 q23.1 156600000 159100000 gneg +band hs1 q23.2 q23.2 159100000 160500000 gpos50 +band hs1 q23.3 q23.3 160500000 165500000 gneg +band hs1 q24.1 q24.1 165500000 167200000 gpos50 +band hs1 q24.2 q24.2 167200000 170900000 gneg +band hs1 q24.3 q24.3 170900000 173000000 gpos75 +band hs1 q25.1 q25.1 173000000 176100000 gneg +band hs1 q25.2 q25.2 176100000 180300000 gpos50 +band hs1 q25.3 q25.3 180300000 185800000 gneg +band hs1 q31.1 q31.1 185800000 190800000 gpos100 +band hs1 q31.2 q31.2 190800000 193800000 gneg +band hs1 q31.3 q31.3 193800000 198700000 gpos100 +band hs1 q32.1 q32.1 198700000 207100000 gneg +band hs1 q32.2 q32.2 207100000 211300000 gpos25 +band hs1 q32.3 q32.3 211300000 214400000 gneg +band hs1 q41 q41 214400000 223900000 gpos100 +band hs1 q42.11 q42.11 223900000 224400000 gneg +band hs1 q42.12 q42.12 224400000 226800000 gpos25 +band hs1 q42.13 q42.13 226800000 230500000 gneg +band hs1 q42.2 q42.2 230500000 234600000 gpos50 +band hs1 q42.3 q42.3 234600000 236400000 gneg +band hs1 q43 q43 236400000 243500000 gpos75 +band hs1 q44 q44 243500000 248956422 gneg +band hs10 p15.3 p15.3 0 3000000 gneg +band hs10 p15.2 p15.2 3000000 3800000 gpos25 +band hs10 p15.1 p15.1 3800000 6600000 gneg +band hs10 p14 p14 6600000 12200000 gpos75 +band hs10 p13 p13 12200000 17300000 gneg +band hs10 p12.33 p12.33 17300000 18300000 gpos75 +band hs10 p12.32 p12.32 18300000 18400000 gneg +band hs10 p12.31 p12.31 18400000 22300000 gpos75 +band hs10 p12.2 p12.2 22300000 24300000 gneg +band hs10 p12.1 p12.1 24300000 29300000 gpos50 +band hs10 p11.23 p11.23 29300000 31100000 gneg +band hs10 p11.22 p11.22 31100000 34200000 gpos25 +band hs10 p11.21 p11.21 34200000 38000000 gneg +band hs10 p11.1 p11.1 38000000 39800000 acen +band hs10 q11.1 q11.1 39800000 41600000 acen +band hs10 q11.21 q11.21 41600000 45500000 gneg +band hs10 q11.22 q11.22 45500000 48600000 gpos25 +band hs10 q11.23 q11.23 48600000 51100000 gneg +band hs10 q21.1 q21.1 51100000 59400000 gpos100 +band hs10 q21.2 q21.2 59400000 62800000 gneg +band hs10 q21.3 q21.3 62800000 68800000 gpos100 +band hs10 q22.1 q22.1 68800000 73100000 gneg +band hs10 q22.2 q22.2 73100000 75900000 gpos50 +band hs10 q22.3 q22.3 75900000 80300000 gneg +band hs10 q23.1 q23.1 80300000 86100000 gpos100 +band hs10 q23.2 q23.2 86100000 87700000 gneg +band hs10 q23.31 q23.31 87700000 91100000 gpos75 +band hs10 q23.32 q23.32 91100000 92300000 gneg +band hs10 q23.33 q23.33 92300000 95300000 gpos50 +band hs10 q24.1 q24.1 95300000 97500000 gneg +band hs10 q24.2 q24.2 97500000 100100000 gpos50 +band hs10 q24.31 q24.31 100100000 101200000 gneg +band hs10 q24.32 q24.32 101200000 103100000 gpos25 +band hs10 q24.33 q24.33 103100000 104000000 gneg +band hs10 q25.1 q25.1 104000000 110100000 gpos100 +band hs10 q25.2 q25.2 110100000 113100000 gneg +band hs10 q25.3 q25.3 113100000 117300000 gpos75 +band hs10 q26.11 q26.11 117300000 119900000 gneg +band hs10 q26.12 q26.12 119900000 121400000 gpos50 +band hs10 q26.13 q26.13 121400000 125700000 gneg +band hs10 q26.2 q26.2 125700000 128800000 gpos50 +band hs10 q26.3 q26.3 128800000 133797422 gneg +band hs11 p15.5 p15.5 0 2800000 gneg +band hs11 p15.4 p15.4 2800000 11700000 gpos50 +band hs11 p15.3 p15.3 11700000 13800000 gneg +band hs11 p15.2 p15.2 13800000 16900000 gpos50 +band hs11 p15.1 p15.1 16900000 22000000 gneg +band hs11 p14.3 p14.3 22000000 26200000 gpos100 +band hs11 p14.2 p14.2 26200000 27200000 gneg +band hs11 p14.1 p14.1 27200000 31000000 gpos75 +band hs11 p13 p13 31000000 36400000 gneg +band hs11 p12 p12 36400000 43400000 gpos100 +band hs11 p11.2 p11.2 43400000 48800000 gneg +band hs11 p11.12 p11.12 48800000 51000000 gpos75 +band hs11 p11.11 p11.11 51000000 53400000 acen +band hs11 q11 q11 53400000 55800000 acen +band hs11 q12.1 q12.1 55800000 60100000 gpos75 +band hs11 q12.2 q12.2 60100000 61900000 gneg +band hs11 q12.3 q12.3 61900000 63600000 gpos25 +band hs11 q13.1 q13.1 63600000 66100000 gneg +band hs11 q13.2 q13.2 66100000 68700000 gpos25 +band hs11 q13.3 q13.3 68700000 70500000 gneg +band hs11 q13.4 q13.4 70500000 75500000 gpos50 +band hs11 q13.5 q13.5 75500000 77400000 gneg +band hs11 q14.1 q14.1 77400000 85900000 gpos100 +band hs11 q14.2 q14.2 85900000 88600000 gneg +band hs11 q14.3 q14.3 88600000 93000000 gpos100 +band hs11 q21 q21 93000000 97400000 gneg +band hs11 q22.1 q22.1 97400000 102300000 gpos100 +band hs11 q22.2 q22.2 102300000 103000000 gneg +band hs11 q22.3 q22.3 103000000 110600000 gpos100 +band hs11 q23.1 q23.1 110600000 112700000 gneg +band hs11 q23.2 q23.2 112700000 114600000 gpos50 +band hs11 q23.3 q23.3 114600000 121300000 gneg +band hs11 q24.1 q24.1 121300000 124000000 gpos50 +band hs11 q24.2 q24.2 124000000 127900000 gneg +band hs11 q24.3 q24.3 127900000 130900000 gpos50 +band hs11 q25 q25 130900000 135086622 gneg +band hs12 p13.33 p13.33 0 3200000 gneg +band hs12 p13.32 p13.32 3200000 5300000 gpos25 +band hs12 p13.31 p13.31 5300000 10000000 gneg +band hs12 p13.2 p13.2 10000000 12600000 gpos75 +band hs12 p13.1 p13.1 12600000 14600000 gneg +band hs12 p12.3 p12.3 14600000 19800000 gpos100 +band hs12 p12.2 p12.2 19800000 21100000 gneg +band hs12 p12.1 p12.1 21100000 26300000 gpos100 +band hs12 p11.23 p11.23 26300000 27600000 gneg +band hs12 p11.22 p11.22 27600000 30500000 gpos50 +band hs12 p11.21 p11.21 30500000 33200000 gneg +band hs12 p11.1 p11.1 33200000 35500000 acen +band hs12 q11 q11 35500000 37800000 acen +band hs12 q12 q12 37800000 46000000 gpos100 +band hs12 q13.11 q13.11 46000000 48700000 gneg +band hs12 q13.12 q13.12 48700000 51100000 gpos25 +band hs12 q13.13 q13.13 51100000 54500000 gneg +band hs12 q13.2 q13.2 54500000 56200000 gpos25 +band hs12 q13.3 q13.3 56200000 57700000 gneg +band hs12 q14.1 q14.1 57700000 62700000 gpos75 +band hs12 q14.2 q14.2 62700000 64700000 gneg +band hs12 q14.3 q14.3 64700000 67300000 gpos50 +band hs12 q15 q15 67300000 71100000 gneg +band hs12 q21.1 q21.1 71100000 75300000 gpos75 +band hs12 q21.2 q21.2 75300000 79900000 gneg +band hs12 q21.31 q21.31 79900000 86300000 gpos100 +band hs12 q21.32 q21.32 86300000 88600000 gneg +band hs12 q21.33 q21.33 88600000 92200000 gpos100 +band hs12 q22 q22 92200000 95800000 gneg +band hs12 q23.1 q23.1 95800000 101200000 gpos75 +band hs12 q23.2 q23.2 101200000 103500000 gneg +band hs12 q23.3 q23.3 103500000 108600000 gpos50 +band hs12 q24.11 q24.11 108600000 111300000 gneg +band hs12 q24.12 q24.12 111300000 111900000 gpos25 +band hs12 q24.13 q24.13 111900000 113900000 gneg +band hs12 q24.21 q24.21 113900000 116400000 gpos50 +band hs12 q24.22 q24.22 116400000 117700000 gneg +band hs12 q24.23 q24.23 117700000 120300000 gpos50 +band hs12 q24.31 q24.31 120300000 125400000 gneg +band hs12 q24.32 q24.32 125400000 128700000 gpos50 +band hs12 q24.33 q24.33 128700000 133275309 gneg +band hs13 p13 p13 0 4600000 gvar +band hs13 p12 p12 4600000 10100000 stalk +band hs13 p11.2 p11.2 10100000 16500000 gvar +band hs13 p11.1 p11.1 16500000 17700000 acen +band hs13 q11 q11 17700000 18900000 acen +band hs13 q12.11 q12.11 18900000 22600000 gneg +band hs13 q12.12 q12.12 22600000 24900000 gpos25 +band hs13 q12.13 q12.13 24900000 27200000 gneg +band hs13 q12.2 q12.2 27200000 28300000 gpos25 +band hs13 q12.3 q12.3 28300000 31600000 gneg +band hs13 q13.1 q13.1 31600000 33400000 gpos50 +band hs13 q13.2 q13.2 33400000 34900000 gneg +band hs13 q13.3 q13.3 34900000 39500000 gpos75 +band hs13 q14.11 q14.11 39500000 44600000 gneg +band hs13 q14.12 q14.12 44600000 45200000 gpos25 +band hs13 q14.13 q14.13 45200000 46700000 gneg +band hs13 q14.2 q14.2 46700000 50300000 gpos50 +band hs13 q14.3 q14.3 50300000 54700000 gneg +band hs13 q21.1 q21.1 54700000 59000000 gpos100 +band hs13 q21.2 q21.2 59000000 61800000 gneg +band hs13 q21.31 q21.31 61800000 65200000 gpos75 +band hs13 q21.32 q21.32 65200000 68100000 gneg +band hs13 q21.33 q21.33 68100000 72800000 gpos100 +band hs13 q22.1 q22.1 72800000 74900000 gneg +band hs13 q22.2 q22.2 74900000 76700000 gpos50 +band hs13 q22.3 q22.3 76700000 78500000 gneg +band hs13 q31.1 q31.1 78500000 87100000 gpos100 +band hs13 q31.2 q31.2 87100000 89400000 gneg +band hs13 q31.3 q31.3 89400000 94400000 gpos100 +band hs13 q32.1 q32.1 94400000 97500000 gneg +band hs13 q32.2 q32.2 97500000 98700000 gpos25 +band hs13 q32.3 q32.3 98700000 101100000 gneg +band hs13 q33.1 q33.1 101100000 104200000 gpos100 +band hs13 q33.2 q33.2 104200000 106400000 gneg +band hs13 q33.3 q33.3 106400000 109600000 gpos100 +band hs13 q34 q34 109600000 114364328 gneg +band hs14 p13 p13 0 3600000 gvar +band hs14 p12 p12 3600000 8000000 stalk +band hs14 p11.2 p11.2 8000000 16100000 gvar +band hs14 p11.1 p11.1 16100000 17200000 acen +band hs14 q11.1 q11.1 17200000 18200000 acen +band hs14 q11.2 q11.2 18200000 24100000 gneg +band hs14 q12 q12 24100000 32900000 gpos100 +band hs14 q13.1 q13.1 32900000 34800000 gneg +band hs14 q13.2 q13.2 34800000 36100000 gpos50 +band hs14 q13.3 q13.3 36100000 37400000 gneg +band hs14 q21.1 q21.1 37400000 43000000 gpos100 +band hs14 q21.2 q21.2 43000000 46700000 gneg +band hs14 q21.3 q21.3 46700000 50400000 gpos100 +band hs14 q22.1 q22.1 50400000 53600000 gneg +band hs14 q22.2 q22.2 53600000 55000000 gpos25 +band hs14 q22.3 q22.3 55000000 57600000 gneg +band hs14 q23.1 q23.1 57600000 61600000 gpos75 +band hs14 q23.2 q23.2 61600000 64300000 gneg +band hs14 q23.3 q23.3 64300000 67400000 gpos50 +band hs14 q24.1 q24.1 67400000 69800000 gneg +band hs14 q24.2 q24.2 69800000 73300000 gpos50 +band hs14 q24.3 q24.3 73300000 78800000 gneg +band hs14 q31.1 q31.1 78800000 83100000 gpos100 +band hs14 q31.2 q31.2 83100000 84400000 gneg +band hs14 q31.3 q31.3 84400000 89300000 gpos100 +band hs14 q32.11 q32.11 89300000 91400000 gneg +band hs14 q32.12 q32.12 91400000 94200000 gpos25 +band hs14 q32.13 q32.13 94200000 95800000 gneg +band hs14 q32.2 q32.2 95800000 100900000 gpos50 +band hs14 q32.31 q32.31 100900000 102700000 gneg +band hs14 q32.32 q32.32 102700000 103500000 gpos50 +band hs14 q32.33 q32.33 103500000 107043718 gneg +band hs15 p13 p13 0 4200000 gvar +band hs15 p12 p12 4200000 9700000 stalk +band hs15 p11.2 p11.2 9700000 17500000 gvar +band hs15 p11.1 p11.1 17500000 19000000 acen 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q24.3 76300000 78000000 gneg +band hs15 q25.1 q25.1 78000000 81400000 gpos50 +band hs15 q25.2 q25.2 81400000 84700000 gneg +band hs15 q25.3 q25.3 84700000 88500000 gpos50 +band hs15 q26.1 q26.1 88500000 93800000 gneg +band hs15 q26.2 q26.2 93800000 98000000 gpos50 +band hs15 q26.3 q26.3 98000000 101991189 gneg +band hs16 p13.3 p13.3 0 7800000 gneg +band hs16 p13.2 p13.2 7800000 10400000 gpos50 +band hs16 p13.13 p13.13 10400000 12500000 gneg +band hs16 p13.12 p13.12 12500000 14700000 gpos50 +band hs16 p13.11 p13.11 14700000 16700000 gneg +band hs16 p12.3 p12.3 16700000 21200000 gpos50 +band hs16 p12.2 p12.2 21200000 24200000 gneg +band hs16 p12.1 p12.1 24200000 28500000 gpos50 +band hs16 p11.2 p11.2 28500000 35300000 gneg +band hs16 p11.1 p11.1 35300000 36800000 acen +band hs16 q11.1 q11.1 36800000 38400000 acen +band hs16 q11.2 q11.2 38400000 47000000 gvar +band hs16 q12.1 q12.1 47000000 52600000 gneg +band hs16 q12.2 q12.2 52600000 56000000 gpos50 +band hs16 q13 q13 56000000 57300000 gneg +band hs16 q21 q21 57300000 66600000 gpos100 +band hs16 q22.1 q22.1 66600000 70800000 gneg +band hs16 q22.2 q22.2 70800000 72800000 gpos50 +band hs16 q22.3 q22.3 72800000 74100000 gneg +band hs16 q23.1 q23.1 74100000 79200000 gpos75 +band hs16 q23.2 q23.2 79200000 81600000 gneg +band hs16 q23.3 q23.3 81600000 84100000 gpos50 +band hs16 q24.1 q24.1 84100000 87000000 gneg +band hs16 q24.2 q24.2 87000000 88700000 gpos25 +band hs16 q24.3 q24.3 88700000 90338345 gneg +band hs17 p13.3 p13.3 0 3400000 gneg +band hs17 p13.2 p13.2 3400000 6500000 gpos50 +band hs17 p13.1 p13.1 6500000 10800000 gneg +band hs17 p12 p12 10800000 16100000 gpos75 +band hs17 p11.2 p11.2 16100000 22700000 gneg +band hs17 p11.1 p11.1 22700000 25100000 acen +band hs17 q11.1 q11.1 25100000 27400000 acen +band hs17 q11.2 q11.2 27400000 33500000 gneg +band hs17 q12 q12 33500000 39800000 gpos50 +band hs17 q21.1 q21.1 39800000 40200000 gneg +band hs17 q21.2 q21.2 40200000 42800000 gpos25 +band hs17 q21.31 q21.31 42800000 46800000 gneg +band hs17 q21.32 q21.32 46800000 49300000 gpos25 +band hs17 q21.33 q21.33 49300000 52100000 gneg +band hs17 q22 q22 52100000 59500000 gpos75 +band hs17 q23.1 q23.1 59500000 60200000 gneg +band hs17 q23.2 q23.2 60200000 63100000 gpos75 +band hs17 q23.3 q23.3 63100000 64600000 gneg +band hs17 q24.1 q24.1 64600000 66200000 gpos50 +band hs17 q24.2 q24.2 66200000 69100000 gneg +band hs17 q24.3 q24.3 69100000 72900000 gpos75 +band hs17 q25.1 q25.1 72900000 76800000 gneg +band hs17 q25.2 q25.2 76800000 77200000 gpos25 +band hs17 q25.3 q25.3 77200000 83257441 gneg +band hs18 p11.32 p11.32 0 2900000 gneg +band hs18 p11.31 p11.31 2900000 7200000 gpos50 +band hs18 p11.23 p11.23 7200000 8500000 gneg +band hs18 p11.22 p11.22 8500000 10900000 gpos25 +band hs18 p11.21 p11.21 10900000 15400000 gneg +band hs18 p11.1 p11.1 15400000 18500000 acen +band hs18 q11.1 q11.1 18500000 21500000 acen +band hs18 q11.2 q11.2 21500000 27500000 gneg +band hs18 q12.1 q12.1 27500000 35100000 gpos100 +band hs18 q12.2 q12.2 35100000 39500000 gneg +band hs18 q12.3 q12.3 39500000 45900000 gpos75 +band hs18 q21.1 q21.1 45900000 50700000 gneg +band hs18 q21.2 q21.2 50700000 56200000 gpos75 +band hs18 q21.31 q21.31 56200000 58600000 gneg +band hs18 q21.32 q21.32 58600000 61300000 gpos50 +band hs18 q21.33 q21.33 61300000 63900000 gneg +band hs18 q22.1 q22.1 63900000 69100000 gpos100 +band hs18 q22.2 q22.2 69100000 71000000 gneg +band hs18 q22.3 q22.3 71000000 75400000 gpos25 +band hs18 q23 q23 75400000 80373285 gneg +band hs19 p13.3 p13.3 0 6900000 gneg +band hs19 p13.2 p13.2 6900000 12600000 gpos25 +band hs19 p13.13 p13.13 12600000 13800000 gneg +band hs19 p13.12 p13.12 13800000 16100000 gpos25 +band hs19 p13.11 p13.11 16100000 19900000 gneg +band hs19 p12 p12 19900000 24200000 gvar +band hs19 p11 p11 24200000 26200000 acen +band hs19 q11 q11 26200000 28100000 acen +band hs19 q12 q12 28100000 31900000 gvar +band hs19 q13.11 q13.11 31900000 35100000 gneg +band hs19 q13.12 q13.12 35100000 37800000 gpos25 +band hs19 q13.13 q13.13 37800000 38200000 gneg +band hs19 q13.2 q13.2 38200000 42900000 gpos25 +band hs19 q13.31 q13.31 42900000 44700000 gneg +band hs19 q13.32 q13.32 44700000 47500000 gpos25 +band hs19 q13.33 q13.33 47500000 50900000 gneg +band hs19 q13.41 q13.41 50900000 53100000 gpos25 +band hs19 q13.42 q13.42 53100000 55800000 gneg +band hs19 q13.43 q13.43 55800000 58617616 gpos25 +band hs2 p25.3 p25.3 0 4400000 gneg +band hs2 p25.2 p25.2 4400000 6900000 gpos50 +band hs2 p25.1 p25.1 6900000 12000000 gneg +band hs2 p24.3 p24.3 12000000 16500000 gpos75 +band hs2 p24.2 p24.2 16500000 19000000 gneg +band hs2 p24.1 p24.1 19000000 23800000 gpos75 +band hs2 p23.3 p23.3 23800000 27700000 gneg +band hs2 p23.2 p23.2 27700000 29800000 gpos25 +band hs2 p23.1 p23.1 29800000 31800000 gneg +band hs2 p22.3 p22.3 31800000 36300000 gpos75 +band hs2 p22.2 p22.2 36300000 38300000 gneg +band hs2 p22.1 p22.1 38300000 41500000 gpos50 +band hs2 p21 p21 41500000 47500000 gneg +band hs2 p16.3 p16.3 47500000 52600000 gpos100 +band hs2 p16.2 p16.2 52600000 54700000 gneg +band hs2 p16.1 p16.1 54700000 61000000 gpos100 +band hs2 p15 p15 61000000 63900000 gneg +band hs2 p14 p14 63900000 68400000 gpos50 +band hs2 p13.3 p13.3 68400000 71300000 gneg +band hs2 p13.2 p13.2 71300000 73300000 gpos50 +band hs2 p13.1 p13.1 73300000 74800000 gneg +band hs2 p12 p12 74800000 83100000 gpos100 +band hs2 p11.2 p11.2 83100000 91800000 gneg +band hs2 p11.1 p11.1 91800000 93900000 acen +band hs2 q11.1 q11.1 93900000 96000000 acen +band hs2 q11.2 q11.2 96000000 102100000 gneg +band hs2 q12.1 q12.1 102100000 105300000 gpos50 +band hs2 q12.2 q12.2 105300000 106700000 gneg +band hs2 q12.3 q12.3 106700000 108700000 gpos25 +band hs2 q13 q13 108700000 112200000 gneg +band hs2 q14.1 q14.1 112200000 118100000 gpos50 +band hs2 q14.2 q14.2 118100000 121600000 gneg +band hs2 q14.3 q14.3 121600000 129100000 gpos50 +band hs2 q21.1 q21.1 129100000 131700000 gneg +band hs2 q21.2 q21.2 131700000 134300000 gpos25 +band hs2 q21.3 q21.3 134300000 136100000 gneg +band hs2 q22.1 q22.1 136100000 141500000 gpos100 +band hs2 q22.2 q22.2 141500000 143400000 gneg +band hs2 q22.3 q22.3 143400000 147900000 gpos100 +band hs2 q23.1 q23.1 147900000 149000000 gneg +band hs2 q23.2 q23.2 149000000 149600000 gpos25 +band hs2 q23.3 q23.3 149600000 154000000 gneg +band hs2 q24.1 q24.1 154000000 158900000 gpos75 +band hs2 q24.2 q24.2 158900000 162900000 gneg +band hs2 q24.3 q24.3 162900000 168900000 gpos75 +band hs2 q31.1 q31.1 168900000 177100000 gneg +band hs2 q31.2 q31.2 177100000 179700000 gpos50 +band hs2 q31.3 q31.3 179700000 182100000 gneg +band hs2 q32.1 q32.1 182100000 188500000 gpos75 +band hs2 q32.2 q32.2 188500000 191100000 gneg +band hs2 q32.3 q32.3 191100000 196600000 gpos75 +band hs2 q33.1 q33.1 196600000 202500000 gneg +band hs2 q33.2 q33.2 202500000 204100000 gpos50 +band hs2 q33.3 q33.3 204100000 208200000 gneg +band hs2 q34 q34 208200000 214500000 gpos100 +band hs2 q35 q35 214500000 220700000 gneg +band hs2 q36.1 q36.1 220700000 224300000 gpos75 +band hs2 q36.2 q36.2 224300000 225200000 gneg +band hs2 q36.3 q36.3 225200000 230100000 gpos100 +band hs2 q37.1 q37.1 230100000 234700000 gneg +band hs2 q37.2 q37.2 234700000 236400000 gpos50 +band hs2 q37.3 q37.3 236400000 242193529 gneg +band hs20 p13 p13 0 5100000 gneg +band hs20 p12.3 p12.3 5100000 9200000 gpos75 +band hs20 p12.2 p12.2 9200000 12000000 gneg +band hs20 p12.1 p12.1 12000000 17900000 gpos75 +band hs20 p11.23 p11.23 17900000 21300000 gneg +band hs20 p11.22 p11.22 21300000 22300000 gpos25 +band hs20 p11.21 p11.21 22300000 25700000 gneg +band hs20 p11.1 p11.1 25700000 28100000 acen +band hs20 q11.1 q11.1 28100000 30400000 acen +band hs20 q11.21 q11.21 30400000 33500000 gneg +band hs20 q11.22 q11.22 33500000 35800000 gpos25 +band hs20 q11.23 q11.23 35800000 39000000 gneg +band hs20 q12 q12 39000000 43100000 gpos75 +band hs20 q13.11 q13.11 43100000 43500000 gneg +band hs20 q13.12 q13.12 43500000 47800000 gpos25 +band hs20 q13.13 q13.13 47800000 51200000 gneg +band hs20 q13.2 q13.2 51200000 56400000 gpos75 +band hs20 q13.31 q13.31 56400000 57800000 gneg +band hs20 q13.32 q13.32 57800000 59700000 gpos50 +band hs20 q13.33 q13.33 59700000 64444167 gneg +band hs21 p13 p13 0 3100000 gvar +band hs21 p12 p12 3100000 7000000 stalk +band hs21 p11.2 p11.2 7000000 10900000 gvar +band hs21 p11.1 p11.1 10900000 12000000 acen +band hs21 q11.1 q11.1 12000000 13000000 acen +band hs21 q11.2 q11.2 13000000 15000000 gneg +band hs21 q21.1 q21.1 15000000 22600000 gpos100 +band hs21 q21.2 q21.2 22600000 25500000 gneg +band hs21 q21.3 q21.3 25500000 30200000 gpos75 +band hs21 q22.11 q22.11 30200000 34400000 gneg +band hs21 q22.12 q22.12 34400000 36400000 gpos50 +band hs21 q22.13 q22.13 36400000 38300000 gneg +band hs21 q22.2 q22.2 38300000 41200000 gpos50 +band hs21 q22.3 q22.3 41200000 46709983 gneg +band hs22 p13 p13 0 4300000 gvar +band hs22 p12 p12 4300000 9400000 stalk +band hs22 p11.2 p11.2 9400000 13700000 gvar +band hs22 p11.1 p11.1 13700000 15000000 acen +band hs22 q11.1 q11.1 15000000 17400000 acen +band hs22 q11.21 q11.21 17400000 21700000 gneg +band hs22 q11.22 q11.22 21700000 23100000 gpos25 +band hs22 q11.23 q11.23 23100000 25500000 gneg +band hs22 q12.1 q12.1 25500000 29200000 gpos50 +band hs22 q12.2 q12.2 29200000 31800000 gneg +band hs22 q12.3 q12.3 31800000 37200000 gpos50 +band hs22 q13.1 q13.1 37200000 40600000 gneg +band hs22 q13.2 q13.2 40600000 43800000 gpos50 +band hs22 q13.31 q13.31 43800000 48100000 gneg +band hs22 q13.32 q13.32 48100000 49100000 gpos50 +band hs22 q13.33 q13.33 49100000 50818468 gneg +band hs3 p26.3 p26.3 0 2800000 gpos50 +band hs3 p26.2 p26.2 2800000 4000000 gneg +band hs3 p26.1 p26.1 4000000 8100000 gpos50 +band hs3 p25.3 p25.3 8100000 11600000 gneg +band hs3 p25.2 p25.2 11600000 13200000 gpos25 +band hs3 p25.1 p25.1 13200000 16300000 gneg +band hs3 p24.3 p24.3 16300000 23800000 gpos100 +band hs3 p24.2 p24.2 23800000 26300000 gneg +band hs3 p24.1 p24.1 26300000 30800000 gpos75 +band hs3 p23 p23 30800000 32000000 gneg +band hs3 p22.3 p22.3 32000000 36400000 gpos50 +band hs3 p22.2 p22.2 36400000 39300000 gneg +band hs3 p22.1 p22.1 39300000 43600000 gpos75 +band hs3 p21.33 p21.33 43600000 44100000 gneg +band hs3 p21.32 p21.32 44100000 44200000 gpos50 +band hs3 p21.31 p21.31 44200000 50600000 gneg +band hs3 p21.2 p21.2 50600000 52300000 gpos25 +band hs3 p21.1 p21.1 52300000 54400000 gneg +band hs3 p14.3 p14.3 54400000 58600000 gpos50 +band hs3 p14.2 p14.2 58600000 63800000 gneg +band hs3 p14.1 p14.1 63800000 69700000 gpos50 +band hs3 p13 p13 69700000 74100000 gneg +band hs3 p12.3 p12.3 74100000 79800000 gpos75 +band hs3 p12.2 p12.2 79800000 83500000 gneg +band hs3 p12.1 p12.1 83500000 87100000 gpos75 +band hs3 p11.2 p11.2 87100000 87800000 gneg +band hs3 p11.1 p11.1 87800000 90900000 acen +band hs3 q11.1 q11.1 90900000 94000000 acen +band hs3 q11.2 q11.2 94000000 98600000 gvar +band hs3 q12.1 q12.1 98600000 100300000 gneg +band hs3 q12.2 q12.2 100300000 101200000 gpos25 +band hs3 q12.3 q12.3 101200000 103100000 gneg +band hs3 q13.11 q13.11 103100000 106500000 gpos75 +band hs3 q13.12 q13.12 106500000 108200000 gneg +band hs3 q13.13 q13.13 108200000 111600000 gpos50 +band hs3 q13.2 q13.2 111600000 113700000 gneg +band hs3 q13.31 q13.31 113700000 117600000 gpos75 +band hs3 q13.32 q13.32 117600000 119300000 gneg +band hs3 q13.33 q13.33 119300000 122200000 gpos75 +band hs3 q21.1 q21.1 122200000 124100000 gneg +band hs3 q21.2 q21.2 124100000 126100000 gpos25 +band hs3 q21.3 q21.3 126100000 129500000 gneg +band hs3 q22.1 q22.1 129500000 134000000 gpos25 +band hs3 q22.2 q22.2 134000000 136000000 gneg +band hs3 q22.3 q22.3 136000000 139000000 gpos25 +band hs3 q23 q23 139000000 143100000 gneg +band hs3 q24 q24 143100000 149200000 gpos100 +band hs3 q25.1 q25.1 149200000 152300000 gneg +band hs3 q25.2 q25.2 152300000 155300000 gpos50 +band hs3 q25.31 q25.31 155300000 157300000 gneg +band hs3 q25.32 q25.32 157300000 159300000 gpos50 +band hs3 q25.33 q25.33 159300000 161000000 gneg +band hs3 q26.1 q26.1 161000000 167900000 gpos100 +band hs3 q26.2 q26.2 167900000 171200000 gneg +band hs3 q26.31 q26.31 171200000 176000000 gpos75 +band hs3 q26.32 q26.32 176000000 179300000 gneg +band hs3 q26.33 q26.33 179300000 183000000 gpos75 +band hs3 q27.1 q27.1 183000000 184800000 gneg +band hs3 q27.2 q27.2 184800000 186300000 gpos25 +band hs3 q27.3 q27.3 186300000 188200000 gneg +band hs3 q28 q28 188200000 192600000 gpos75 +band hs3 q29 q29 192600000 198295559 gneg +band hs4 p16.3 p16.3 0 4500000 gneg +band hs4 p16.2 p16.2 4500000 6000000 gpos25 +band hs4 p16.1 p16.1 6000000 11300000 gneg +band hs4 p15.33 p15.33 11300000 15000000 gpos50 +band hs4 p15.32 p15.32 15000000 17700000 gneg +band hs4 p15.31 p15.31 17700000 21300000 gpos75 +band hs4 p15.2 p15.2 21300000 27700000 gneg +band hs4 p15.1 p15.1 27700000 35800000 gpos100 +band hs4 p14 p14 35800000 41200000 gneg +band hs4 p13 p13 41200000 44600000 gpos50 +band hs4 p12 p12 44600000 48200000 gneg +band hs4 p11 p11 48200000 50000000 acen +band hs4 q11 q11 50000000 51800000 acen +band hs4 q12 q12 51800000 58500000 gneg +band hs4 q13.1 q13.1 58500000 65500000 gpos100 +band hs4 q13.2 q13.2 65500000 69400000 gneg +band hs4 q13.3 q13.3 69400000 75300000 gpos75 +band hs4 q21.1 q21.1 75300000 78000000 gneg +band hs4 q21.21 q21.21 78000000 81500000 gpos50 +band hs4 q21.22 q21.22 81500000 83200000 gneg +band hs4 q21.23 q21.23 83200000 86000000 gpos25 +band hs4 q21.3 q21.3 86000000 87100000 gneg +band hs4 q22.1 q22.1 87100000 92800000 gpos75 +band hs4 q22.2 q22.2 92800000 94200000 gneg +band hs4 q22.3 q22.3 94200000 97900000 gpos75 +band hs4 q23 q23 97900000 100100000 gneg +band hs4 q24 q24 100100000 106700000 gpos50 +band hs4 q25 q25 106700000 113200000 gneg +band hs4 q26 q26 113200000 119900000 gpos75 +band hs4 q27 q27 119900000 122800000 gneg +band hs4 q28.1 q28.1 122800000 127900000 gpos50 +band hs4 q28.2 q28.2 127900000 130100000 gneg +band hs4 q28.3 q28.3 130100000 138500000 gpos100 +band hs4 q31.1 q31.1 138500000 140600000 gneg +band hs4 q31.21 q31.21 140600000 145900000 gpos25 +band hs4 q31.22 q31.22 145900000 147500000 gneg +band hs4 q31.23 q31.23 147500000 150200000 gpos25 +band hs4 q31.3 q31.3 150200000 154600000 gneg +band hs4 q32.1 q32.1 154600000 160800000 gpos100 +band hs4 q32.2 q32.2 160800000 163600000 gneg +band hs4 q32.3 q32.3 163600000 169200000 gpos100 +band hs4 q33 q33 169200000 171000000 gneg +band hs4 q34.1 q34.1 171000000 175400000 gpos75 +band hs4 q34.2 q34.2 175400000 176600000 gneg +band hs4 q34.3 q34.3 176600000 182300000 gpos100 +band hs4 q35.1 q35.1 182300000 186200000 gneg +band hs4 q35.2 q35.2 186200000 190214555 gpos25 +band hs5 p15.33 p15.33 0 4400000 gneg +band hs5 p15.32 p15.32 4400000 6300000 gpos25 +band hs5 p15.31 p15.31 6300000 9900000 gneg +band hs5 p15.2 p15.2 9900000 15000000 gpos50 +band hs5 p15.1 p15.1 15000000 18400000 gneg +band hs5 p14.3 p14.3 18400000 23300000 gpos100 +band hs5 p14.2 p14.2 23300000 24600000 gneg +band hs5 p14.1 p14.1 24600000 28900000 gpos100 +band hs5 p13.3 p13.3 28900000 33800000 gneg +band hs5 p13.2 p13.2 33800000 38400000 gpos25 +band hs5 p13.1 p13.1 38400000 42500000 gneg +band hs5 p12 p12 42500000 46100000 gpos50 +band hs5 p11 p11 46100000 48800000 acen +band hs5 q11.1 q11.1 48800000 51400000 acen +band hs5 q11.2 q11.2 51400000 59600000 gneg +band hs5 q12.1 q12.1 59600000 63600000 gpos75 +band hs5 q12.2 q12.2 63600000 63900000 gneg +band hs5 q12.3 q12.3 63900000 67400000 gpos75 +band hs5 q13.1 q13.1 67400000 69100000 gneg +band hs5 q13.2 q13.2 69100000 74000000 gpos50 +band hs5 q13.3 q13.3 74000000 77600000 gneg +band hs5 q14.1 q14.1 77600000 82100000 gpos50 +band hs5 q14.2 q14.2 82100000 83500000 gneg +band hs5 q14.3 q14.3 83500000 93000000 gpos100 +band hs5 q15 q15 93000000 98900000 gneg +band hs5 q21.1 q21.1 98900000 103400000 gpos100 +band hs5 q21.2 q21.2 103400000 105100000 gneg +band hs5 q21.3 q21.3 105100000 110200000 gpos100 +band hs5 q22.1 q22.1 110200000 112200000 gneg +band hs5 q22.2 q22.2 112200000 113800000 gpos50 +band hs5 q22.3 q22.3 113800000 115900000 gneg +band hs5 q23.1 q23.1 115900000 122100000 gpos100 +band hs5 q23.2 q23.2 122100000 127900000 gneg +band hs5 q23.3 q23.3 127900000 131200000 gpos100 +band hs5 q31.1 q31.1 131200000 136900000 gneg +band hs5 q31.2 q31.2 136900000 140100000 gpos25 +band hs5 q31.3 q31.3 140100000 145100000 gneg +band hs5 q32 q32 145100000 150400000 gpos75 +band hs5 q33.1 q33.1 150400000 153300000 gneg +band hs5 q33.2 q33.2 153300000 156300000 gpos50 +band hs5 q33.3 q33.3 156300000 160500000 gneg +band hs5 q34 q34 160500000 169000000 gpos100 +band hs5 q35.1 q35.1 169000000 173300000 gneg +band hs5 q35.2 q35.2 173300000 177100000 gpos25 +band hs5 q35.3 q35.3 177100000 181538259 gneg +band hs6 p25.3 p25.3 0 2300000 gneg +band hs6 p25.2 p25.2 2300000 4200000 gpos25 +band hs6 p25.1 p25.1 4200000 7100000 gneg +band hs6 p24.3 p24.3 7100000 10600000 gpos50 +band hs6 p24.2 p24.2 10600000 11600000 gneg +band hs6 p24.1 p24.1 11600000 13400000 gpos25 +band hs6 p23 p23 13400000 15200000 gneg +band hs6 p22.3 p22.3 15200000 25200000 gpos75 +band hs6 p22.2 p22.2 25200000 27100000 gneg +band hs6 p22.1 p22.1 27100000 30500000 gpos50 +band hs6 p21.33 p21.33 30500000 32100000 gneg +band hs6 p21.32 p21.32 32100000 33500000 gpos25 +band hs6 p21.31 p21.31 33500000 36600000 gneg +band hs6 p21.2 p21.2 36600000 40500000 gpos25 +band hs6 p21.1 p21.1 40500000 46200000 gneg +band hs6 p12.3 p12.3 46200000 51800000 gpos100 +band hs6 p12.2 p12.2 51800000 53000000 gneg +band hs6 p12.1 p12.1 53000000 57200000 gpos100 +band hs6 p11.2 p11.2 57200000 58500000 gneg +band hs6 p11.1 p11.1 58500000 59800000 acen +band hs6 q11.1 q11.1 59800000 62600000 acen +band hs6 q11.2 q11.2 62600000 62700000 gneg +band hs6 q12 q12 62700000 69200000 gpos100 +band hs6 q13 q13 69200000 75200000 gneg +band hs6 q14.1 q14.1 75200000 83200000 gpos50 +band hs6 q14.2 q14.2 83200000 84200000 gneg +band hs6 q14.3 q14.3 84200000 87300000 gpos50 +band hs6 q15 q15 87300000 92500000 gneg +band hs6 q16.1 q16.1 92500000 98900000 gpos100 +band hs6 q16.2 q16.2 98900000 100000000 gneg +band hs6 q16.3 q16.3 100000000 105000000 gpos100 +band hs6 q21 q21 105000000 114200000 gneg +band hs6 q22.1 q22.1 114200000 117900000 gpos75 +band hs6 q22.2 q22.2 117900000 118100000 gneg +band hs6 q22.31 q22.31 118100000 125800000 gpos100 +band hs6 q22.32 q22.32 125800000 126800000 gneg +band hs6 q22.33 q22.33 126800000 130000000 gpos75 +band hs6 q23.1 q23.1 130000000 130900000 gneg +band hs6 q23.2 q23.2 130900000 134700000 gpos50 +band hs6 q23.3 q23.3 134700000 138300000 gneg +band hs6 q24.1 q24.1 138300000 142200000 gpos75 +band hs6 q24.2 q24.2 142200000 145100000 gneg +band hs6 q24.3 q24.3 145100000 148500000 gpos75 +band hs6 q25.1 q25.1 148500000 152100000 gneg +band hs6 q25.2 q25.2 152100000 155200000 gpos50 +band hs6 q25.3 q25.3 155200000 160600000 gneg +band hs6 q26 q26 160600000 164100000 gpos50 +band hs6 q27 q27 164100000 170805979 gneg +band hs7 p22.3 p22.3 0 2800000 gneg +band hs7 p22.2 p22.2 2800000 4500000 gpos25 +band hs7 p22.1 p22.1 4500000 7200000 gneg +band hs7 p21.3 p21.3 7200000 13700000 gpos100 +band hs7 p21.2 p21.2 13700000 16500000 gneg +band hs7 p21.1 p21.1 16500000 20900000 gpos100 +band hs7 p15.3 p15.3 20900000 25500000 gneg +band hs7 p15.2 p15.2 25500000 27900000 gpos50 +band hs7 p15.1 p15.1 27900000 28800000 gneg +band hs7 p14.3 p14.3 28800000 34900000 gpos75 +band hs7 p14.2 p14.2 34900000 37100000 gneg +band hs7 p14.1 p14.1 37100000 43300000 gpos75 +band hs7 p13 p13 43300000 45400000 gneg +band hs7 p12.3 p12.3 45400000 49000000 gpos75 +band hs7 p12.2 p12.2 49000000 50500000 gneg +band hs7 p12.1 p12.1 50500000 53900000 gpos75 +band hs7 p11.2 p11.2 53900000 58100000 gneg +band hs7 p11.1 p11.1 58100000 60100000 acen +band hs7 q11.1 q11.1 60100000 62100000 acen +band hs7 q11.21 q11.21 62100000 67500000 gneg +band hs7 q11.22 q11.22 67500000 72700000 gpos50 +band hs7 q11.23 q11.23 72700000 77900000 gneg +band hs7 q21.11 q21.11 77900000 86700000 gpos100 +band hs7 q21.12 q21.12 86700000 88500000 gneg +band hs7 q21.13 q21.13 88500000 91500000 gpos75 +band hs7 q21.2 q21.2 91500000 93300000 gneg +band hs7 q21.3 q21.3 93300000 98400000 gpos75 +band hs7 q22.1 q22.1 98400000 104200000 gneg +band hs7 q22.2 q22.2 104200000 104900000 gpos50 +band hs7 q22.3 q22.3 104900000 107800000 gneg +band hs7 q31.1 q31.1 107800000 115000000 gpos75 +band hs7 q31.2 q31.2 115000000 117700000 gneg +band hs7 q31.31 q31.31 117700000 121400000 gpos75 +band hs7 q31.32 q31.32 121400000 124100000 gneg +band hs7 q31.33 q31.33 124100000 127500000 gpos75 +band hs7 q32.1 q32.1 127500000 129600000 gneg +band hs7 q32.2 q32.2 129600000 130800000 gpos25 +band hs7 q32.3 q32.3 130800000 132900000 gneg +band hs7 q33 q33 132900000 138500000 gpos50 +band hs7 q34 q34 138500000 143400000 gneg +band hs7 q35 q35 143400000 148200000 gpos75 +band hs7 q36.1 q36.1 148200000 152800000 gneg +band hs7 q36.2 q36.2 152800000 155200000 gpos25 +band hs7 q36.3 q36.3 155200000 159345973 gneg +band hs8 p23.3 p23.3 0 2300000 gneg +band hs8 p23.2 p23.2 2300000 6300000 gpos75 +band hs8 p23.1 p23.1 6300000 12800000 gneg +band hs8 p22 p22 12800000 19200000 gpos100 +band hs8 p21.3 p21.3 19200000 23500000 gneg +band hs8 p21.2 p21.2 23500000 27500000 gpos50 +band hs8 p21.1 p21.1 27500000 29000000 gneg +band hs8 p12 p12 29000000 36700000 gpos75 +band hs8 p11.23 p11.23 36700000 38500000 gneg +band hs8 p11.22 p11.22 38500000 39900000 gpos25 +band hs8 p11.21 p11.21 39900000 43200000 gneg +band hs8 p11.1 p11.1 43200000 45200000 acen +band hs8 q11.1 q11.1 45200000 47200000 acen +band hs8 q11.21 q11.21 47200000 51300000 gneg +band hs8 q11.22 q11.22 51300000 51700000 gpos75 +band hs8 q11.23 q11.23 51700000 54600000 gneg +band hs8 q12.1 q12.1 54600000 60600000 gpos50 +band hs8 q12.2 q12.2 60600000 61300000 gneg +band hs8 q12.3 q12.3 61300000 65100000 gpos50 +band hs8 q13.1 q13.1 65100000 67100000 gneg +band hs8 q13.2 q13.2 67100000 69600000 gpos50 +band hs8 q13.3 q13.3 69600000 72000000 gneg +band hs8 q21.11 q21.11 72000000 74600000 gpos100 +band hs8 q21.12 q21.12 74600000 74700000 gneg +band hs8 q21.13 q21.13 74700000 83500000 gpos75 +band hs8 q21.2 q21.2 83500000 85900000 gneg +band hs8 q21.3 q21.3 85900000 92300000 gpos100 +band hs8 q22.1 q22.1 92300000 97900000 gneg +band hs8 q22.2 q22.2 97900000 100500000 gpos25 +band hs8 q22.3 q22.3 100500000 105100000 gneg +band hs8 q23.1 q23.1 105100000 109500000 gpos75 +band hs8 q23.2 q23.2 109500000 111100000 gneg +band hs8 q23.3 q23.3 111100000 116700000 gpos100 +band hs8 q24.11 q24.11 116700000 118300000 gneg +band hs8 q24.12 q24.12 118300000 121500000 gpos50 +band hs8 q24.13 q24.13 121500000 126300000 gneg +band hs8 q24.21 q24.21 126300000 130400000 gpos50 +band hs8 q24.22 q24.22 130400000 135400000 gneg +band hs8 q24.23 q24.23 135400000 138900000 gpos75 +band hs8 q24.3 q24.3 138900000 145138636 gneg +band hs9 p24.3 p24.3 0 2200000 gneg +band hs9 p24.2 p24.2 2200000 4600000 gpos25 +band hs9 p24.1 p24.1 4600000 9000000 gneg +band hs9 p23 p23 9000000 14200000 gpos75 +band hs9 p22.3 p22.3 14200000 16600000 gneg +band hs9 p22.2 p22.2 16600000 18500000 gpos25 +band hs9 p22.1 p22.1 18500000 19900000 gneg +band hs9 p21.3 p21.3 19900000 25600000 gpos100 +band hs9 p21.2 p21.2 25600000 28000000 gneg +band hs9 p21.1 p21.1 28000000 33200000 gpos100 +band hs9 p13.3 p13.3 33200000 36300000 gneg +band hs9 p13.2 p13.2 36300000 37900000 gpos25 +band hs9 p13.1 p13.1 37900000 39000000 gneg +band hs9 p12 p12 39000000 40000000 gpos50 +band hs9 p11.2 p11.2 40000000 42200000 gneg +band hs9 p11.1 p11.1 42200000 43000000 acen +band hs9 q11 q11 43000000 45500000 acen +band hs9 q12 q12 45500000 61500000 gvar +band hs9 q13 q13 61500000 65000000 gneg +band hs9 q21.11 q21.11 65000000 69300000 gpos25 +band hs9 q21.12 q21.12 69300000 71300000 gneg +band hs9 q21.13 q21.13 71300000 76600000 gpos50 +band hs9 q21.2 q21.2 76600000 78500000 gneg +band hs9 q21.31 q21.31 78500000 81500000 gpos50 +band hs9 q21.32 q21.32 81500000 84300000 gneg +band hs9 q21.33 q21.33 84300000 87800000 gpos50 +band hs9 q22.1 q22.1 87800000 89200000 gneg +band hs9 q22.2 q22.2 89200000 91200000 gpos25 +band hs9 q22.31 q22.31 91200000 93900000 gneg +band hs9 q22.32 q22.32 93900000 96500000 gpos25 +band hs9 q22.33 q22.33 96500000 99800000 gneg +band hs9 q31.1 q31.1 99800000 105400000 gpos100 +band hs9 q31.2 q31.2 105400000 108500000 gneg +band hs9 q31.3 q31.3 108500000 112100000 gpos25 +band hs9 q32 q32 112100000 114900000 gneg +band hs9 q33.1 q33.1 114900000 119800000 gpos75 +band hs9 q33.2 q33.2 119800000 123100000 gneg +band hs9 q33.3 q33.3 123100000 127500000 gpos25 +band hs9 q34.11 q34.11 127500000 130600000 gneg +band hs9 q34.12 q34.12 130600000 131100000 gpos25 +band hs9 q34.13 q34.13 131100000 133100000 gneg +band hs9 q34.2 q34.2 133100000 134500000 gpos25 +band hs9 q34.3 q34.3 134500000 138394717 gneg +#band hsM m m 0 16569 gneg +band hsX p22.33 p22.33 0 4400000 gneg +band hsX p22.32 p22.32 4400000 6100000 gpos50 +band hsX p22.31 p22.31 6100000 9600000 gneg +band hsX p22.2 p22.2 9600000 17400000 gpos50 +band hsX p22.13 p22.13 17400000 19200000 gneg +band hsX p22.12 p22.12 19200000 21900000 gpos50 +band hsX p22.11 p22.11 21900000 24900000 gneg +band hsX p21.3 p21.3 24900000 29300000 gpos100 +band hsX p21.2 p21.2 29300000 31500000 gneg +band hsX p21.1 p21.1 31500000 37800000 gpos100 +band hsX p11.4 p11.4 37800000 42500000 gneg +band hsX p11.3 p11.3 42500000 47600000 gpos75 +band hsX p11.23 p11.23 47600000 50100000 gneg +band hsX p11.22 p11.22 50100000 54800000 gpos25 +band hsX p11.21 p11.21 54800000 58100000 gneg +band hsX p11.1 p11.1 58100000 61000000 acen +band hsX q11.1 q11.1 61000000 63800000 acen +band hsX q11.2 q11.2 63800000 65400000 gneg +band hsX q12 q12 65400000 68500000 gpos50 +band hsX q13.1 q13.1 68500000 73000000 gneg +band hsX q13.2 q13.2 73000000 74700000 gpos50 +band hsX q13.3 q13.3 74700000 76800000 gneg +band hsX q21.1 q21.1 76800000 85400000 gpos100 +band hsX q21.2 q21.2 85400000 87000000 gneg +band hsX q21.31 q21.31 87000000 92700000 gpos100 +band hsX q21.32 q21.32 92700000 94300000 gneg +band hsX q21.33 q21.33 94300000 99100000 gpos75 +band hsX q22.1 q22.1 99100000 103300000 gneg +band hsX q22.2 q22.2 103300000 104500000 gpos50 +band hsX q22.3 q22.3 104500000 109400000 gneg +band hsX q23 q23 109400000 117400000 gpos75 +band hsX q24 q24 117400000 121800000 gneg +band hsX q25 q25 121800000 129500000 gpos100 +band hsX q26.1 q26.1 129500000 131300000 gneg +band hsX q26.2 q26.2 131300000 134500000 gpos25 +band hsX q26.3 q26.3 134500000 138900000 gneg +band hsX q27.1 q27.1 138900000 141200000 gpos75 +band hsX q27.2 q27.2 141200000 143000000 gneg +band hsX q27.3 q27.3 143000000 148000000 gpos100 +band hsX q28 q28 148000000 156040895 gneg +band hsY p11.32 p11.32 0 300000 gneg +band hsY p11.31 p11.31 300000 600000 gpos50 +band hsY p11.2 p11.2 600000 10300000 gneg +band hsY p11.1 p11.1 10300000 10400000 acen +band hsY q11.1 q11.1 10400000 10600000 acen +band hsY q11.21 q11.21 10600000 12400000 gneg +band hsY q11.221 q11.221 12400000 17100000 gpos50 +band hsY q11.222 q11.222 17100000 19600000 gneg +band hsY q11.223 q11.223 19600000 23800000 gpos50 +band hsY q11.23 q11.23 23800000 26600000 gneg +band hsY q12 q12 26600000 57227415 gvar diff -r a64dc31ab7f2 -r 740057a5126d karyotype/karyotype.mouse.mm10.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/karyotype/karyotype.mouse.mm10.txt Fri May 01 07:28:50 2020 -0400 @@ -0,0 +1,424 @@ +chr - mm1 1 0 195471971 chr1 +chr - mm2 2 0 182113224 chr2 +chr - mm3 3 0 160039680 chr3 +chr - mm4 4 0 156508116 chr4 +chr - mm5 5 0 151834684 chr5 +chr - mm6 6 0 149736546 chr6 +chr - mm7 7 0 145441459 chr7 +chr - mm8 8 0 129401213 chr8 +chr - mm9 9 0 124595110 chr9 +chr - mm10 10 0 130694993 chr10 +chr - mm11 11 0 122082543 chr11 +chr - mm12 12 0 120129022 chr12 +chr - mm13 13 0 120421639 chr13 +chr - mm14 14 0 124902244 chr14 +chr - mm15 15 0 104043685 chr15 +chr - mm16 16 0 98207768 chr16 +chr - mm17 17 0 94987271 chr17 +chr - mm18 18 0 90702639 chr18 +chr - mm19 19 0 61431566 chr19 +chr - mmX x 0 171031299 chrx +chr - mmY y 0 91744698 chry +band mm1 qa1 qa1 0 8840440 gpos100 +band mm1 qa2 qa2 8840440 12278390 gneg +band mm1 qa3 qa3 12278390 20136559 gpos33 +band mm1 qa4 qa4 20136559 22101102 gneg +band mm1 qa5 qa5 22101102 30941543 gpos100 +band mm1 qb qb 30941543 43219933 gneg +band mm1 qc1.1 qc1.1 43219933 54516052 gpos66 +band mm1 qc1.2 qc1.2 54516052 55989459 gneg +band mm1 qc1.3 qc1.3 55989459 59427408 gpos75 +band mm1 qc2 qc2 59427408 65321035 gneg +band mm1 qc3 qc3 65321035 74652612 gpos33 +band mm1 qc4 qc4 74652612 80055103 gneg +band mm1 qc5 qc5 80055103 87422137 gpos33 +band mm1 qd qd 87422137 99700527 gneg +band mm1 qe1.1 qe1.1 99700527 102647341 gpos33 +band mm1 qe1.2 qe1.2 102647341 103629612 gneg +band mm1 qe2.1 qe2.1 103629612 112470053 gpos100 +band mm1 qe2.2 qe2.2 112470053 113943460 gneg +band mm1 qe2.3 qe2.3 113943460 125730715 gpos100 +band mm1 qe3 qe3 125730715 128677528 gneg +band mm1 qe4 qe4 128677528 139482511 gpos66 +band mm1 qf qf 139482511 147340681 gneg +band mm1 qg1 qg1 147340681 151760902 gpos100 +band mm1 qg2 qg2 151760902 152743173 gneg +band mm1 qg3 qg3 152743173 157163393 gpos100 +band mm1 qh1 qh1 157163393 160110207 gneg +band mm1 qh2.1 qh2.1 160110207 164039292 gpos33 +band mm1 qh2.2 qh2.2 164039292 165512699 gneg +band mm1 qh2.3 qh2.3 165512699 169932919 gpos33 +band mm1 qh3 qh3 169932919 175826546 gneg +band mm1 qh4 qh4 175826546 181720174 gpos33 +band mm1 qh5 qh5 181720174 188104936 gneg +band mm1 qh6 qh6 188104936 195471971 gpos33 +band mm10 qa1 qa1 0 12822904 gpos100 +band mm10 qa2 qa2 12822904 17754791 gneg +band mm10 qa3 qa3 17754791 23673055 gpos33 +band mm10 qa4 qa4 23673055 33536828 gneg +band mm10 qb1 qb1 33536828 41427846 gpos100 +band mm10 qb2 qb2 41427846 48332487 gneg +band mm10 qb3 qb3 48332487 56223506 gpos100 +band mm10 qb4 qb4 56223506 64114524 gneg +band mm10 qb5.1 qb5.1 64114524 68060034 gpos100 +band mm10 qb5.2 qb5.2 68060034 68553222 gneg +band mm10 qb5.3 qb5.3 68553222 74964675 gpos100 +band mm10 qc1 qc1 74964675 89267146 gneg +band mm10 qc2 qc2 89267146 96171787 gpos33 +band mm10 qc3 qc3 96171787 99130919 gneg +band mm10 qd1 qd1 99130919 111953824 gpos100 +band mm10 qd2 qd2 111953824 124776729 gneg +band mm10 qd3 qd3 124776729 130694993 gpos33 +band mm11 qa1 qa1 0 13046989 gpos100 +band mm11 qa2 qa2 13046989 17240664 gneg +band mm11 qa3.1 qa3.1 17240664 21900303 gpos100 +band mm11 qa3.2 qa3.2 21900303 25628014 gneg +band mm11 qa3.3 qa3.3 25628014 30287653 gpos100 +band mm11 qa4 qa4 30287653 36345184 gneg +band mm11 qa5 qa5 36345184 43334643 gpos100 +band mm11 qb1.1 qb1.1 43334643 47994282 gneg +band mm11 qb1.2 qb1.2 47994282 49858137 gpos33 +band mm11 qb1.3 qb1.3 49858137 60109343 gneg +band mm11 qb2 qb2 60109343 62905127 gpos33 +band mm11 qb3 qb3 62905127 70826513 gneg +band mm11 qb4 qb4 70826513 74088260 gpos33 +band mm11 qb5 qb5 74088260 82009647 gneg +band mm11 qc qc 82009647 90396997 gpos100 +band mm11 qd qd 90396997 102512059 gneg +band mm11 qe1 qe1 102512059 110433445 gpos66 +band mm11 qe2 qe2 110433445 122082543 gneg +band mm12 qa1.1 qa1.1 0 17601321 gpos100 +band mm12 qa1.2 qa1.2 17601321 21121586 gneg +band mm12 qa1.3 qa1.3 21121586 25961949 gpos66 +band mm12 qa2 qa2 25961949 31682379 gneg +band mm12 qa3 qa3 31682379 39162941 gpos33 +band mm12 qb1 qb1 39162941 44003304 gneg +band mm12 qb2 qb2 44003304 44883370 gpos33 +band mm12 qb3 qb3 44883370 51923899 gneg +band mm12 qc1 qc1 51923899 66004957 gpos100 +band mm12 qc2 qc2 66004957 71285353 gneg +band mm12 qc3 qc3 71285353 80966080 gpos100 +band mm12 qd1 qd1 80966080 85366411 gneg +band mm12 qd2 qd2 85366411 88446642 gpos33 +band mm12 qd3 qd3 88446642 95487171 gneg +band mm12 qe qe 95487171 106047964 gpos100 +band mm12 qf1 qf1 106047964 114408592 gneg +band mm12 qf2 qf2 114408592 120129022 gpos66 +band mm13 qa1 qa1 0 16286533 gpos100 +band mm13 qa2 qa2 16286533 21221846 gneg +band mm13 qa3.1 qa3.1 21221846 29611878 gpos66 +band mm13 qa3.2 qa3.2 29611878 33066597 gneg +band mm13 qa3.3 qa3.3 33066597 41456629 gpos33 +band mm13 qa4 qa4 41456629 44417817 gneg +band mm13 qa5 qa5 44417817 52807849 gpos33 +band mm13 qb1 qb1 52807849 59223756 gneg +band mm13 qb2 qb2 59223756 61691413 gpos33 +band mm13 qb3 qb3 61691413 69587914 gneg +band mm13 qc1 qc1 69587914 78471477 gpos33 +band mm13 qc2 qc2 78471477 80939134 gneg +band mm13 qc3 qc3 80939134 94758011 gpos100 +band mm13 qd1 qd1 94758011 106602762 gneg +band mm13 qd2.1 qd2.1 106602762 110551012 gpos33 +band mm13 qd2.2 qd2.2 110551012 116473388 gneg +band mm13 qd2.3 qd2.3 116473388 120421639 gpos33 +band mm14 qa1 qa1 0 14988269 gpos100 +band mm14 qa2 qa2 14988269 19484750 gneg +band mm14 qa3 qa3 19484750 29976538 gpos33 +band mm14 qb qb 29976538 43465980 gneg +band mm14 qc1 qc1 43465980 51959333 gpos100 +band mm14 qc2 qc2 51959333 54956987 gneg +band mm14 qc3 qc3 54956987 59953077 gpos66 +band mm14 qd1 qd1 59953077 68946038 gneg +band mm14 qd2 qd2 68946038 72942910 gpos33 +band mm14 qd3 qd3 72942910 84933525 gneg +band mm14 qe1 qe1 84933525 88930397 gpos66 +band mm14 qe2.1 qe2.1 88930397 98922577 gpos100 +band mm14 qe2.2 qe2.2 98922577 99921795 gneg +band mm14 qe2.3 qe2.3 99921795 107415929 gpos100 +band mm14 qe3 qe3 107415929 110913192 gneg +band mm14 qe4 qe4 110913192 120905372 gpos100 +band mm14 qe5 qe5 120905372 124902244 gneg +band mm15 qa1 qa1 0 16500320 gpos100 +band mm15 qa2 qa2 16500320 24292137 gneg +band mm15 qb1 qb1 24292137 29792244 gpos33 +band mm15 qb2 qb2 29792244 32083955 gneg +band mm15 qb3.1 qb3.1 32083955 43084169 gpos100 +band mm15 qb3.2 qb3.2 43084169 44917538 gneg +band mm15 qb3.3 qb3.3 44917538 49959302 gpos66 +band mm15 qc qc 49959302 53626040 gneg +band mm15 qd1 qd1 53626040 66459622 gpos100 +band mm15 qd2 qd2 66459622 68751333 gneg +band mm15 qd3 qd3 68751333 77459835 gpos66 +band mm15 qe1 qe1 77459835 83876627 gneg +band mm15 qe2 qe2 83876627 87085022 gpos33 +band mm15 qe3 qe3 87085022 95793524 gneg +band mm15 qf1 qf1 95793524 101293631 gpos66 +band mm15 qf2 qf2 101293631 102210316 gneg +band mm15 qf3 qf3 102210316 104043685 gpos33 +band mm16 qa1 qa1 0 15432649 gpos100 +band mm16 qa2 qa2 15432649 16367961 gneg +band mm16 qa3 qa3 16367961 20576865 gpos33 +band mm16 qb1 qb1 20576865 26188738 gneg +band mm16 qb2 qb2 26188738 32268266 gpos33 +band mm16 qb3 qb3 32268266 38347795 gneg +band mm16 qb4 qb4 38347795 44894979 gpos33 +band mm16 qb5 qb5 44894979 53780444 gneg +band mm16 qc1.1 qc1.1 53780444 57989348 gpos66 +band mm16 qc1.2 qc1.2 57989348 58924660 gneg +band mm16 qc1.3 qc1.3 58924660 66874813 gpos66 +band mm16 qc2 qc2 66874813 70616061 gneg +band mm16 qc3.1 qc3.1 70616061 79033870 gpos100 +band mm16 qc3.2 qc3.2 79033870 79501526 gneg +band mm16 qc3.3 qc3.3 79501526 91660583 gpos100 +band mm16 qc4 qc4 91660583 98207768 gneg +band mm17 qa1 qa1 0 13943085 gpos100 +band mm17 qa2 qa2 13943085 16121692 gneg +band mm17 qa3.1 qa3.1 16121692 17428857 gpos33 +band mm17 qa3.2 qa3.2 17428857 21786071 gneg +band mm17 qa3.3 qa3.3 21786071 31371942 gpos66 +band mm17 qb1 qb1 31371942 40086371 gneg +band mm17 qb2 qb2 40086371 41393535 gpos33 +band mm17 qb3 qb3 41393535 45750749 gneg +band mm17 qc qc 45750749 55772342 gpos66 +band mm17 qd qd 55772342 60129556 gneg +band mm17 qe1.1 qe1.1 60129556 67972542 gpos100 +band mm17 qe1.2 qe1.2 67972542 68843985 gneg +band mm17 qe1.3 qe1.3 68843985 73201199 gpos100 +band mm17 qe2 qe2 73201199 78429856 gneg +band mm17 qe3 qe3 78429856 82787071 gpos33 +band mm17 qe4 qe4 82787071 88887171 gneg +band mm17 qe5 qe5 88887171 94987271 gpos33 +band mm18 qa1 qa1 0 19406146 gpos100 +band mm18 qa2 qa2 19406146 29531091 gneg +band mm18 qb1 qb1 29531091 35437310 gpos66 +band mm18 qb2 qb2 35437310 37124801 gneg +band mm18 qb3 qb3 37124801 45562255 gpos100 +band mm18 qc qc 45562255 49780983 gneg +band mm18 qd1 qd1 49780983 53999710 gpos100 +band mm18 qd2 qd2 53999710 54421583 gneg +band mm18 qd3 qd3 54421583 60749674 gpos100 +band mm18 qe1 qe1 60749674 67921511 gneg +band mm18 qe2 qe2 67921511 75093347 gpos33 +band mm18 qe3 qe3 75093347 83530802 gneg +band mm18 qe4 qe4 83530802 90702639 gpos33 +band mm19 qa qa 0 16680094 gpos100 +band mm19 qb qb 16680094 25630388 gneg +band mm19 qc1 qc1 25630388 34987514 gpos66 +band mm19 qc2 qc2 34987514 38242166 gneg +band mm19 qc3 qc3 38242166 47599292 gpos66 +band mm19 qd1 qd1 47599292 51667608 gneg +band mm19 qd2 qd2 51667608 58990576 gpos33 +band mm19 qd3 qd3 58990576 61431566 gneg +band mm2 qa1 qa1 0 14080919 gpos100 +band mm2 qa2 qa2 14080919 16427739 gneg +band mm2 qa3 qa3 16427739 29100566 gpos33 +band mm2 qb qb 29100566 48344489 gneg +band mm2 qc1.1 qc1.1 48344489 60547953 gpos100 +band mm2 qc1.2 qc1.2 60547953 61017317 gneg +band mm2 qc1.3 qc1.3 61017317 68527140 gpos100 +band mm2 qc2 qc2 68527140 71812688 gneg +band mm2 qc3 qc3 71812688 81199968 gpos66 +band mm2 qd qd 81199968 88709792 gneg +band mm2 qe1 qe1 88709792 101382619 gpos100 +band mm2 qe2 qe2 101382619 105137531 gneg +band mm2 qe3 qe3 105137531 113116719 gpos33 +band mm2 qe4 qe4 113116719 115932902 gneg +band mm2 qe5 qe5 115932902 123912090 gpos66 +band mm2 qf1 qf1 123912090 131891278 gneg +band mm2 qf2 qf2 131891278 134707462 gpos33 +band mm2 qf3 qf3 134707462 141278557 gneg +band mm2 qg1 qg1 141278557 146910925 gpos100 +band mm2 qg2 qg2 146910925 147849653 gneg +band mm2 qg3 qg3 147849653 152543293 gpos100 +band mm2 qh1 qh1 152543293 159114389 gneg +band mm2 qh2 qh2 159114389 163338664 gpos33 +band mm2 qh3 qh3 163338664 173664672 gneg +band mm2 qh4 qh4 173664672 182113224 gpos33 +band mm3 qa1 qa1 0 18541182 gpos100 +band mm3 qa2 qa2 18541182 20492885 gneg +band mm3 qa3 qa3 20492885 35618587 gpos66 +band mm3 qb qb 35618587 46840881 gneg +band mm3 qc qc 46840881 56599399 gpos100 +band mm3 qd qd 56599399 60990731 gneg +band mm3 qe1 qe1 60990731 69773397 gpos33 +band mm3 qe2 qe2 69773397 72700952 gneg +band mm3 qe3 qe3 72700952 83923246 gpos100 +band mm3 qf1 qf1 83923246 93193838 gneg +band mm3 qf2.1 qf2.1 93193838 97585170 gpos33 +band mm3 qf2.2 qf2.2 97585170 106367836 gneg +band mm3 qf2.3 qf2.3 106367836 108319539 gpos33 +band mm3 qf3 qf3 108319539 115150501 gneg +band mm3 qg1 qg1 115150501 126860721 gpos100 +band mm3 qg2 qg2 126860721 128812425 gneg +band mm3 qg3 qg3 128812425 138570942 gpos66 +band mm3 qh1 qh1 138570942 143938126 gneg +band mm3 qh2 qh2 143938126 148329459 gpos33 +band mm3 qh3 qh3 148329459 154184569 gneg +band mm3 qh4 qh4 154184569 160039680 gpos33 +band mm4 qa1 qa1 0 14882673 gpos100 +band mm4 qa2 qa2 14882673 17763191 gneg +band mm4 qa3 qa3 17763191 28325088 gpos100 +band mm4 qa4 qa4 28325088 30245433 gneg +band mm4 qa5 qa5 30245433 43687848 gpos66 +band mm4 qb1 qb1 43687848 51849314 gneg +band mm4 qb2 qb2 51849314 55209918 gpos33 +band mm4 qb3 qb3 55209918 63371384 gneg +band mm4 qc1 qc1 63371384 69612505 gpos33 +band mm4 qc2 qc2 69612505 72012936 gneg +band mm4 qc3 qc3 72012936 84015092 gpos100 +band mm4 qc4 qc4 84015092 89776127 gneg +band mm4 qc5 qc5 89776127 97457507 gpos66 +band mm4 qc6 qc6 97457507 105618973 gneg +band mm4 qc7 qc7 105618973 110899922 gpos66 +band mm4 qd1 qd1 110899922 117621130 gneg +band mm4 qd2.1 qd2.1 117621130 120501647 gpos33 +band mm4 qd2.2 qd2.2 120501647 131063544 gneg +band mm4 qd2.3 qd2.3 131063544 133944062 gpos33 +band mm4 qd3 qd3 133944062 141625442 gneg +band mm4 qe1 qe1 141625442 147866563 gpos100 +band mm4 qe2 qe2 147866563 156508116 gneg +band mm5 qa1 qa1 0 14895174 gpos100 +band mm5 qa2 qa2 14895174 16336643 gneg +band mm5 qa3 qa3 16336643 25465943 gpos66 +band mm5 qb1 qb1 25465943 33634265 gneg +band mm5 qb2 qb2 33634265 35556223 gpos33 +band mm5 qb3 qb3 35556223 50451398 gneg +band mm5 qc1 qc1 50451398 58619719 gpos33 +band mm5 qc2 qc2 58619719 61022167 gneg +band mm5 qc3.1 qc3.1 61022167 71592936 gpos100 +band mm5 qc3.2 qc3.2 71592936 73514894 gneg +band mm5 qc3.3 qc3.3 73514894 77839300 gpos66 +band mm5 qd qd 77839300 81683216 gneg +band mm5 qe1 qe1 81683216 91293006 gpos100 +band mm5 qe2 qe2 91293006 93695453 gneg +band mm5 qe3 qe3 93695453 99461327 gpos33 +band mm5 qe4 qe4 99461327 101863775 gneg +band mm5 qe5 qe5 101863775 107629649 gpos33 +band mm5 qf qf 107629649 124927271 gneg +band mm5 qg1.1 qg1.1 124927271 126849229 gpos33 +band mm5 qg1.2 qg1.2 126849229 127810208 gneg +band mm5 qg1.3 qg1.3 127810208 130693145 gpos33 +band mm5 qg2 qg2 130693145 146068809 gneg +band mm5 qg3 qg3 146068809 151834684 gpos33 +band mm6 qa1 qa1 0 16637394 gpos100 +band mm6 qa2 qa2 16637394 21530745 gneg +band mm6 qa3.1 qa3.1 21530745 27402766 gpos100 +band mm6 qa3.2 qa3.2 27402766 28381436 gneg +band mm6 qa3.3 qa3.3 28381436 34253458 gpos100 +band mm6 qb1 qb1 34253458 41593485 gneg +band mm6 qb2.1 qb2.1 41593485 44529495 gpos66 +band mm6 qb2.2 qb2.2 44529495 45997501 gneg +band mm6 qb2.3 qb2.3 45997501 50890852 gpos66 +band mm6 qb3 qb3 50890852 62634895 gneg +band mm6 qc1 qc1 62634895 74378937 gpos100 +band mm6 qc2 qc2 74378937 76825613 gneg +band mm6 qc3 qc3 76825613 86122980 gpos66 +band mm6 qd1 qd1 86122980 94441677 gneg +band mm6 qd2 qd2 94441677 95909683 gpos33 +band mm6 qd3 qd3 95909683 103249709 gneg +band mm6 qe1 qe1 103249709 108632396 gpos100 +band mm6 qe2 qe2 108632396 109611066 gneg +band mm6 qe3 qe3 109611066 116951093 gpos100 +band mm6 qf1 qf1 116951093 122823114 gneg +band mm6 qf2 qf2 122823114 125269790 gpos33 +band mm6 qf3 qf3 125269790 132120481 gneg +band mm6 qg1 qg1 132120481 139460508 gpos66 +band mm6 qg2 qg2 139460508 142885854 gneg +band mm6 qg3 qg3 142885854 149736546 gpos33 +band mm7 qa1 qa1 0 15202939 gpos100 +band mm7 qa2 qa2 15202939 18243527 gneg +band mm7 qa3 qa3 18243527 28378821 gpos33 +band mm7 qb1 qb1 28378821 34459997 gneg +band mm7 qb2 qb2 34459997 37500585 gpos33 +band mm7 qb3 qb3 37500585 47635878 gneg +band mm7 qb4 qb4 47635878 54223819 gpos33 +band mm7 qb5 qb5 54223819 60811759 gneg +band mm7 qc qc 60811759 71453817 gpos100 +band mm7 qd1 qd1 71453817 77028229 gneg +band mm7 qd2 qd2 77028229 80575581 gpos66 +band mm7 qd3 qd3 80575581 90204110 gneg +band mm7 qe1 qe1 90204110 99832639 gpos100 +band mm7 qe2 qe2 99832639 102366462 gneg +band mm7 qe3 qe3 102366462 111488226 gpos33 +band mm7 qf1 qf1 111488226 118582931 gneg +band mm7 qf2 qf2 118582931 123143813 gpos33 +band mm7 qf3 qf3 123143813 137333224 gneg +band mm7 qf4 qf4 137333224 140880577 gpos33 +band mm7 qf5 qf5 140880577 145441459 gneg +band mm8 qa1.1 qa1.1 0 15940729 gpos100 +band mm8 qa1.2 qa1.2 15940729 16878419 gneg +band mm8 qa1.3 qa1.3 16878419 20160333 gpos33 +band mm8 qa2 qa2 20160333 29537233 gneg +band mm8 qa3 qa3 29537233 33756838 gpos33 +band mm8 qa4 qa4 33756838 44071427 gneg +band mm8 qb1.1 qb1.1 44071427 48291032 gpos66 +band mm8 qb1.2 qb1.2 48291032 50166412 gneg +band mm8 qb1.3 qb1.3 50166412 55792551 gpos66 +band mm8 qb2 qb2 55792551 59543311 gneg +band mm8 qb3.1 qb3.1 59543311 67044831 gpos100 +band mm8 qb3.2 qb3.2 67044831 67982521 gneg +band mm8 qb3.3 qb3.3 67982521 74546350 gpos100 +band mm8 qc1 qc1 74546350 80172490 gneg +band mm8 qc2 qc2 80172490 84860940 gpos33 +band mm8 qc3 qc3 84860940 90018235 gneg +band mm8 qc4 qc4 90018235 91424770 gpos33 +band mm8 qc5 qc5 91424770 95644374 gneg +band mm8 qd1 qd1 95644374 103145894 gpos100 +band mm8 qd2 qd2 103145894 104083584 gneg +band mm8 qd3 qd3 104083584 110647414 gpos33 +band mm8 qe1 qe1 110647414 123775073 gneg +band mm8 qe2 qe2 123775073 129401213 gpos33 +band mm9 qa1 qa1 0 14412120 gpos100 +band mm9 qa2 qa2 14412120 19526099 gneg +band mm9 qa3 qa3 19526099 24175170 gpos33 +band mm9 qa4 qa4 24175170 38122384 gneg +band mm9 qa5.1 qa5.1 38122384 44166177 gpos66 +band mm9 qa5.2 qa5.2 44166177 46490712 gneg +band mm9 qa5.3 qa5.3 46490712 54859040 gpos66 +band mm9 qb qb 54859040 63227369 gneg +band mm9 qc qc 63227369 69736069 gpos33 +band mm9 qd qd 69736069 77639490 gneg +band mm9 qe1 qe1 77639490 82753468 gpos33 +band mm9 qe2 qe2 82753468 84613097 gneg +band mm9 qe3.1 qe3.1 84613097 91121796 gpos100 +band mm9 qe3.2 qe3.2 91121796 91586703 gneg +band mm9 qe3.3 qe3.3 91586703 100884846 gpos100 +band mm9 qe4 qe4 100884846 101814660 gpos66 +band mm9 qf1 qf1 101814660 108323360 gneg +band mm9 qf2 qf2 108323360 111112803 gpos33 +band mm9 qf3 qf3 111112803 119946038 gneg +band mm9 qf4 qf4 119946038 124595110 gpos33 +band mmX qa1.1 qa1.1 0 15772338 gpos100 +band mmX qa1.2 qa1.2 15772338 18236766 gneg +band mmX qa1.3 qa1.3 18236766 21194080 gpos33 +band mmX qa2 qa2 21194080 28094478 gneg +band mmX qa3.1 qa3.1 28094478 33516219 gpos66 +band mmX qa3.2 qa3.2 33516219 34501991 gneg +band mmX qa3.3 qa3.3 34501991 39923732 gpos66 +band mmX qa4 qa4 39923732 47809902 gneg +band mmX qa5 qa5 47809902 56188957 gpos66 +band mmX qa6 qa6 56188957 63089355 gneg +band mmX qa7.1 qa7.1 63089355 69496867 gpos66 +band mmX qa7.2 qa7.2 69496867 70975524 gneg +band mmX qa7.3 qa7.3 70975524 77383037 gpos66 +band mmX qb qb 77383037 82311893 gneg +band mmX qc1 qc1 82311893 91183833 gpos100 +band mmX qc2 qc2 91183833 92169604 gneg +band mmX qc3 qc3 92169604 101041545 gpos100 +band mmX qd qd 101041545 109913486 gneg +band mmX qe1 qe1 109913486 120264083 gpos100 +band mmX qe2 qe2 120264083 121249854 gneg +band mmX qe3 qe3 121249854 135050651 gpos100 +band mmX qf1 qf1 135050651 141458163 gneg +band mmX qf2 qf2 141458163 148851447 gpos33 +band mmX qf3 qf3 148851447 156244731 gneg +band mmX qf4 qf4 156244731 163638015 gpos33 +band mmX qf5 qf5 163638015 171031299 gneg +band mmY qa1 qa1 0 20642557 gpos100 +band mmY qa2 qa2 20642557 32684048 gpos66 +band mmY qb qb 32684048 45298944 gpos33 +band mmY qc1 qc1 45298944 54473414 gpos100 +band mmY qc2 qc2 54473414 61927671 gpos33 +band mmY qc3 qc3 61927671 72248949 gpos100 +band mmY qd qd 72248949 83143632 gpos33 +band mmY qe qe 83143632 91744698 gpos66 diff -r a64dc31ab7f2 -r 740057a5126d karyotype/karyotype.mouse.mm9.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/karyotype/karyotype.mouse.mm9.txt Fri May 01 07:28:50 2020 -0400 @@ -0,0 +1,424 @@ +chr - mm1 1 0 197195432 chr1 +chr - mm2 2 0 181748087 chr2 +chr - mm3 3 0 159599783 chr3 +chr - mm4 4 0 155630120 chr4 +chr - mm5 5 0 152537259 chr5 +chr - mm6 6 0 149517037 chr6 +chr - mm7 7 0 152524553 chr7 +chr - mm8 8 0 131738871 chr8 +chr - mm9 9 0 124076172 chr9 +chr - mm10 10 0 129993255 chr10 +chr - mm11 11 0 121843856 chr11 +chr - mm12 12 0 121257530 chr12 +chr - mm13 13 0 120284312 chr13 +chr - mm14 14 0 125194864 chr14 +chr - mm15 15 0 103494974 chr15 +chr - mm16 16 0 98319150 chr16 +chr - mm17 17 0 95272651 chr17 +chr - mm18 18 0 90772031 chr18 +chr - mm19 19 0 61342430 chr19 +chr - mmX x 0 166650296 chrx +chr - mmY y 0 15902555 chry +band mm1 qa1 qa1 0 8918386 gpos100 +band mm1 qa2 qa2 8918386 12386647 gneg +band mm1 qa3 qa3 12386647 20314102 gpos33 +band mm1 qa4 qa4 20314102 22295965 gneg +band mm1 qa5 qa5 22295965 31214352 gpos100 +band mm1 qb qb 31214352 43601000 gneg +band mm1 qc1.1 qc1.1 43601000 54996715 gpos66 +band mm1 qc1.2 qc1.2 54996715 56483113 gneg +band mm1 qc1.3 qc1.3 56483113 59951375 gpos75 +band mm1 qc2 qc2 59951375 65896965 gneg +band mm1 qc3 qc3 65896965 75310818 gpos33 +band mm1 qc4 qc4 75310818 80760943 gneg +band mm1 qc5 qc5 80760943 88192931 gpos33 +band mm1 qd qd 88192931 100579579 gneg +band mm1 qe1.1 qe1.1 100579579 103552375 gpos33 +band mm1 qe1.2 qe1.2 103552375 104543306 gneg +band mm1 qe2.1 qe2.1 104543306 113461693 gpos100 +band mm1 qe2.2 qe2.2 113461693 114948091 gneg +band mm1 qe2.3 qe2.3 114948091 126839272 gpos100 +band mm1 qe3 qe3 126839272 129812068 gneg +band mm1 qe4 qe4 129812068 140712318 gpos66 +band mm1 qf qf 140712318 148639772 gneg +band mm1 qg1 qg1 148639772 153098966 gpos100 +band mm1 qg2 qg2 153098966 154089897 gneg +band mm1 qg3 qg3 154089897 158549091 gpos100 +band mm1 qh1 qh1 158549091 161521886 gneg +band mm1 qh2.1 qh2.1 161521886 165485613 gpos33 +band mm1 qh2.2 qh2.2 165485613 166972011 gneg +band mm1 qh2.3 qh2.3 166972011 171431204 gpos33 +band mm1 qh3 qh3 171431204 177376795 gneg +band mm1 qh4 qh4 177376795 183322386 gpos33 +band mm1 qh5 qh5 183322386 189763443 gneg +band mm1 qh6 qh6 189763443 197195432 gpos33 +band mm10 qa1 qa1 0 12754055 gpos100 +band mm10 qa2 qa2 12754055 17659461 gneg +band mm10 qa3 qa3 17659461 23545948 gpos33 +band mm10 qa4 qa4 23545948 33356759 gneg +band mm10 qb1 qb1 33356759 41205409 gpos100 +band mm10 qb2 qb2 41205409 48072977 gneg +band mm10 qb3 qb3 48072977 55921626 gpos100 +band mm10 qb4 qb4 55921626 63770276 gneg +band mm10 qb5.1 qb5.1 63770276 67694600 gpos100 +band mm10 qb5.2 qb5.2 67694600 68185141 gneg +band mm10 qb5.3 qb5.3 68185141 74562168 gpos100 +band mm10 qc1 qc1 74562168 88787845 gneg +band mm10 qc2 qc2 88787845 95655414 gpos33 +band mm10 qc3 qc3 95655414 98598657 gneg +band mm10 qd1 qd1 98598657 111352712 gpos100 +band mm10 qd2 qd2 111352712 124106767 gneg +band mm10 qd3 qd3 124106767 129993255 gpos33 +band mm11 qa1 qa1 0 13021480 gpos100 +band mm11 qa2 qa2 13021480 17206956 gneg +band mm11 qa3.1 qa3.1 17206956 21857485 gpos100 +band mm11 qa3.2 qa3.2 21857485 25577908 gneg +band mm11 qa3.3 qa3.3 25577908 30228437 gpos100 +band mm11 qa4 qa4 30228437 36274125 gneg +band mm11 qa5 qa5 36274125 43249918 gpos100 +band mm11 qb1.1 qb1.1 43249918 47900447 gneg +band mm11 qb1.2 qb1.2 47900447 49760658 gpos33 +band mm11 qb1.3 qb1.3 49760658 59991822 gneg +band mm11 qb2 qb2 59991822 62782139 gpos33 +band mm11 qb3 qb3 62782139 70688038 gneg +band mm11 qb4 qb4 70688038 73943408 gpos33 +band mm11 qb5 qb5 73943408 81849307 gneg +band mm11 qc qc 81849307 90220259 gpos100 +band mm11 qd qd 90220259 102311634 gneg +band mm11 qe1 qe1 102311634 110217533 gpos66 +band mm11 qe2 qe2 110217533 121843856 gneg +band mm12 qa1.1 qa1.1 0 17766671 gpos100 +band mm12 qa1.2 qa1.2 17766671 21320005 gneg +band mm12 qa1.3 qa1.3 21320005 26205839 gpos66 +band mm12 qa2 qa2 26205839 31980007 gneg +band mm12 qa3 qa3 31980007 39530843 gpos33 +band mm12 qb1 qb1 39530843 44416677 gneg +band mm12 qb2 qb2 44416677 45305011 gpos33 +band mm12 qb3 qb3 45305011 52411679 gneg +band mm12 qc1 qc1 52411679 66625016 gpos100 +band mm12 qc2 qc2 66625016 71955017 gneg +band mm12 qc3 qc3 71955017 81726686 gpos100 +band mm12 qd1 qd1 81726686 86168354 gneg +band mm12 qd2 qd2 86168354 89277522 gpos33 +band mm12 qd3 qd3 89277522 96384190 gneg +band mm12 qe qe 96384190 107044193 gpos100 +band mm12 qf1 qf1 107044193 115483361 gneg +band mm12 qf2 qf2 115483361 121257530 gpos66 +band mm13 qa1 qa1 0 16267960 gpos100 +band mm13 qa2 qa2 16267960 21197645 gneg +band mm13 qa3.1 qa3.1 21197645 29578109 gpos66 +band mm13 qa3.2 qa3.2 29578109 33028888 gneg +band mm13 qa3.3 qa3.3 33028888 41409353 gpos33 +band mm13 qa4 qa4 41409353 44367164 gneg +band mm13 qa5 qa5 44367164 52747628 gpos33 +band mm13 qb1 qb1 52747628 59156219 gneg +band mm13 qb2 qb2 59156219 61621061 gpos33 +band mm13 qb3 qb3 61621061 69508557 gneg +band mm13 qc1 qc1 69508557 78381990 gpos33 +band mm13 qc2 qc2 78381990 80846832 gneg +band mm13 qc3 qc3 80846832 94649950 gpos100 +band mm13 qd1 qd1 94649950 106481194 gneg +band mm13 qd2.1 qd2.1 106481194 110424942 gpos33 +band mm13 qd2.2 qd2.2 110424942 116340564 gneg +band mm13 qd2.3 qd2.3 116340564 120284312 gpos33 +band mm14 qa1 qa1 0 15023383 gpos100 +band mm14 qa2 qa2 15023383 19530398 gneg +band mm14 qa3 qa3 19530398 30046767 gpos33 +band mm14 qb qb 30046767 43567812 gneg +band mm14 qc1 qc1 43567812 52081063 gpos100 +band mm14 qc2 qc2 52081063 55085740 gneg +band mm14 qc3 qc3 55085740 60093534 gpos66 +band mm14 qd1 qd1 60093534 69107564 gneg +band mm14 qd2 qd2 69107564 73113800 gpos33 +band mm14 qd3 qd3 73113800 85132507 gneg +band mm14 qe1 qe1 85132507 89138743 gpos66 +band mm14 qe2.1 qe2.1 89138743 99154332 gpos100 +band mm14 qe2.2 qe2.2 99154332 100155891 gneg +band mm14 qe2.3 qe2.3 100155891 107667583 gpos100 +band mm14 qe3 qe3 107667583 111173039 gneg +band mm14 qe4 qe4 111173039 121188628 gpos100 +band mm14 qe5 qe5 121188628 125194864 gneg +band mm15 qa1 qa1 0 16413299 gpos100 +band mm15 qa2 qa2 16413299 24164024 gneg +band mm15 qb1 qb1 24164024 29635124 gpos33 +band mm15 qb2 qb2 29635124 31914749 gneg +band mm15 qb3.1 qb3.1 31914749 42856949 gpos100 +band mm15 qb3.2 qb3.2 42856949 44680649 gneg +band mm15 qb3.3 qb3.3 44680649 49695824 gpos66 +band mm15 qc qc 49695824 53343224 gneg +band mm15 qd1 qd1 53343224 66109124 gpos100 +band mm15 qd2 qd2 66109124 68388749 gneg +band mm15 qd3 qd3 68388749 77051324 gpos66 +band mm15 qe1 qe1 77051324 83434274 gneg +band mm15 qe2 qe2 83434274 86625749 gpos33 +band mm15 qe3 qe3 86625749 95288324 gneg +band mm15 qf1 qf1 95288324 100759424 gpos66 +band mm15 qf2 qf2 100759424 101671274 gneg +band mm15 qf3 qf3 101671274 103494974 gpos33 +band mm16 qa1 qa1 0 15450152 gpos100 +band mm16 qa2 qa2 15450152 16386525 gneg +band mm16 qa3 qa3 16386525 20600202 gpos33 +band mm16 qb1 qb1 20600202 26218440 gneg +band mm16 qb2 qb2 26218440 32304863 gpos33 +band mm16 qb3 qb3 32304863 38391287 gneg +band mm16 qb4 qb4 38391287 44945897 gpos33 +band mm16 qb5 qb5 44945897 53841439 gneg +band mm16 qc1.1 qc1.1 53841439 58055117 gpos66 +band mm16 qc1.2 qc1.2 58055117 58991490 gneg +band mm16 qc1.3 qc1.3 58991490 66950659 gpos66 +band mm16 qc2 qc2 66950659 70696150 gneg +band mm16 qc3.1 qc3.1 70696150 79123506 gpos100 +band mm16 qc3.2 qc3.2 79123506 79591692 gneg +band mm16 qc3.3 qc3.3 79591692 91764540 gpos100 +band mm16 qc4 qc4 91764540 98319150 gneg +band mm17 qa1 qa1 0 13984976 gpos100 +band mm17 qa2 qa2 13984976 16170128 gneg +band mm17 qa3.1 qa3.1 16170128 17481220 gpos33 +band mm17 qa3.2 qa3.2 17481220 21851525 gneg +band mm17 qa3.3 qa3.3 21851525 31466196 gpos66 +band mm17 qb1 qb1 31466196 40206806 gneg +band mm17 qb2 qb2 40206806 41517898 gpos33 +band mm17 qb3 qb3 41517898 45888203 gneg +band mm17 qc qc 45888203 55939905 gpos66 +band mm17 qd qd 55939905 60310210 gneg +band mm17 qe1.1 qe1.1 60310210 68176759 gpos100 +band mm17 qe1.2 qe1.2 68176759 69050820 gneg +band mm17 qe1.3 qe1.3 69050820 73421125 gpos100 +band mm17 qe2 qe2 73421125 78665491 gneg +band mm17 qe3 qe3 78665491 83035796 gpos33 +band mm17 qe4 qe4 83035796 89154223 gneg +band mm17 qe5 qe5 89154223 95272651 gpos33 +band mm18 qa1 qa1 0 19420992 gpos100 +band mm18 qa2 qa2 19420992 29553684 gneg +band mm18 qb1 qb1 29553684 35464421 gpos66 +band mm18 qb2 qb2 35464421 37153203 gneg +band mm18 qb3 qb3 37153203 45597113 gpos100 +band mm18 qc qc 45597113 49819068 gneg +band mm18 qd1 qd1 49819068 54041023 gpos100 +band mm18 qd2 qd2 54041023 54463218 gneg +band mm18 qd3 qd3 54463218 60796150 gpos100 +band mm18 qe1 qe1 60796150 67973474 gneg +band mm18 qe2 qe2 67973474 75150797 gpos33 +band mm18 qe3 qe3 75150797 83594707 gneg +band mm18 qe4 qe4 83594707 90772031 gpos33 +band mm19 qa qa 0 16655891 gpos100 +band mm19 qb qb 16655891 25593199 gneg +band mm19 qc1 qc1 25593199 34936748 gpos66 +band mm19 qc2 qc2 34936748 38186678 gneg +band mm19 qc3 qc3 38186678 47530227 gpos66 +band mm19 qd1 qd1 47530227 51592639 gneg +band mm19 qd2 qd2 51592639 58904982 gpos33 +band mm19 qd3 qd3 58904982 61342430 gneg +band mm2 qa1 qa1 0 14052687 gpos100 +band mm2 qa2 qa2 14052687 16394801 gneg +band mm2 qa3 qa3 16394801 29042220 gpos33 +band mm2 qb qb 29042220 48247559 gneg +band mm2 qc1.1 qc1.1 48247559 60426554 gpos100 +band mm2 qc1.2 qc1.2 60426554 60894977 gneg +band mm2 qc1.3 qc1.3 60894977 68389744 gpos100 +band mm2 qc2 qc2 68389744 71668704 gneg +band mm2 qc3 qc3 71668704 81037162 gpos66 +band mm2 qd qd 81037162 88531928 gneg +band mm2 qe1 qe1 88531928 101179347 gpos100 +band mm2 qe2 qe2 101179347 104926730 gneg +band mm2 qe3 qe3 104926730 112889920 gpos33 +band mm2 qe4 qe4 112889920 115700457 gneg +band mm2 qe5 qe5 115700457 123663646 gpos66 +band mm2 qf1 qf1 123663646 131626836 gneg +band mm2 qf2 qf2 131626836 134437373 gpos33 +band mm2 qf3 qf3 134437373 140995294 gneg +band mm2 qg1 qg1 140995294 146616369 gpos100 +band mm2 qg2 qg2 146616369 147553214 gneg +band mm2 qg3 qg3 147553214 152237444 gpos100 +band mm2 qh1 qh1 152237444 158795364 gneg +band mm2 qh2 qh2 158795364 163011170 gpos33 +band mm2 qh3 qh3 163011170 173316474 gneg +band mm2 qh4 qh4 173316474 181748087 gpos33 +band mm3 qa1 qa1 0 18490218 gpos100 +band mm3 qa2 qa2 18490218 20436557 gneg +band mm3 qa3 qa3 20436557 35520683 gpos66 +band mm3 qb qb 35520683 46712131 gneg +band mm3 qc qc 46712131 56443825 gpos100 +band mm3 qd qd 56443825 60823088 gneg +band mm3 qe1 qe1 60823088 69581612 gpos33 +band mm3 qe2 qe2 69581612 72501120 gneg +band mm3 qe3 qe3 72501120 83692569 gpos100 +band mm3 qf1 qf1 83692569 92937678 gneg +band mm3 qf2.1 qf2.1 92937678 97316940 gpos33 +band mm3 qf2.2 qf2.2 97316940 106075465 gneg +band mm3 qf2.3 qf2.3 106075465 108021804 gpos33 +band mm3 qf3 qf3 108021804 114833990 gneg +band mm3 qg1 qg1 114833990 126512023 gpos100 +band mm3 qg2 qg2 126512023 128458361 gneg +band mm3 qg3 qg3 128458361 138190056 gpos66 +band mm3 qh1 qh1 138190056 143542487 gneg +band mm3 qh2 qh2 143542487 147921750 gpos33 +band mm3 qh3 qh3 147921750 153760766 gneg +band mm3 qh4 qh4 153760766 159599783 gpos33 +band mm4 qa1 qa1 0 14799183 gpos100 +band mm4 qa2 qa2 14799183 17663541 gneg +band mm4 qa3 qa3 17663541 28166187 gpos100 +band mm4 qa4 qa4 28166187 30075759 gneg +band mm4 qa5 qa5 30075759 43442763 gpos66 +band mm4 qb1 qb1 43442763 51558444 gneg +band mm4 qb2 qb2 51558444 54900195 gpos33 +band mm4 qb3 qb3 54900195 63015876 gneg +band mm4 qc1 qc1 63015876 69221985 gpos33 +band mm4 qc2 qc2 69221985 71608950 gneg +band mm4 qc3 qc3 71608950 83543776 gpos100 +band mm4 qc4 qc4 83543776 89272492 gneg +band mm4 qc5 qc5 89272492 96910780 gpos66 +band mm4 qc6 qc6 96910780 105026461 gneg +band mm4 qc7 qc7 105026461 110277784 gpos66 +band mm4 qd1 qd1 110277784 116961286 gneg +band mm4 qd2.1 qd2.1 116961286 119825644 gpos33 +band mm4 qd2.2 qd2.2 119825644 130328290 gneg +band mm4 qd2.3 qd2.3 130328290 133192648 gpos33 +band mm4 qd3 qd3 133192648 140830936 gneg +band mm4 qe1 qe1 140830936 147037045 gpos100 +band mm4 qe2 qe2 147037045 155630120 gneg +band mm5 qa1 qa1 0 14964098 gpos100 +band mm5 qa2 qa2 14964098 16412236 gneg +band mm5 qa3 qa3 16412236 25583780 gpos66 +band mm5 qb1 qb1 25583780 33789899 gneg +band mm5 qb2 qb2 33789899 35720750 gpos33 +band mm5 qb3 qb3 35720750 50684848 gneg +band mm5 qc1 qc1 50684848 58890967 gpos33 +band mm5 qc2 qc2 58890967 61304531 gneg +band mm5 qc3.1 qc3.1 61304531 71924213 gpos100 +band mm5 qc3.2 qc3.2 71924213 73855065 gneg +band mm5 qc3.3 qc3.3 73855065 78199480 gpos66 +band mm5 qd qd 78199480 82061183 gneg +band mm5 qe1 qe1 82061183 91715440 gpos100 +band mm5 qe2 qe2 91715440 94129004 gneg +band mm5 qe3 qe3 94129004 99921558 gpos33 +band mm5 qe4 qe4 99921558 102335123 gneg +band mm5 qe5 qe5 102335123 108127677 gpos33 +band mm5 qf qf 108127677 125505339 gneg +band mm5 qg1.1 qg1.1 125505339 127436191 gpos33 +band mm5 qg1.2 qg1.2 127436191 128401616 gneg +band mm5 qg1.3 qg1.3 128401616 131297893 gpos33 +band mm5 qg2 qg2 131297893 146744704 gneg +band mm5 qg3 qg3 146744704 152537259 gpos33 +band mm6 qa1 qa1 0 16613004 gpos100 +band mm6 qa2 qa2 16613004 21499181 gneg +band mm6 qa3.1 qa3.1 21499181 27362595 gpos100 +band mm6 qa3.2 qa3.2 27362595 28339830 gneg +band mm6 qa3.3 qa3.3 28339830 34203243 gpos100 +band mm6 qb1 qb1 34203243 41532510 gneg +band mm6 qb2.1 qb2.1 41532510 44464216 gpos66 +band mm6 qb2.2 qb2.2 44464216 45930070 gneg +band mm6 qb2.3 qb2.3 45930070 50816247 gpos66 +band mm6 qb3 qb3 50816247 62543074 gneg +band mm6 qc1 qc1 62543074 74269900 gpos100 +band mm6 qc2 qc2 74269900 76712989 gneg +band mm6 qc3 qc3 76712989 85996727 gpos66 +band mm6 qd1 qd1 85996727 94303229 gneg +band mm6 qd2 qd2 94303229 95769082 gpos33 +band mm6 qd3 qd3 95769082 103098349 gneg +band mm6 qe1 qe1 103098349 108473144 gpos100 +band mm6 qe2 qe2 108473144 109450380 gneg +band mm6 qe3 qe3 109450380 116779646 gpos100 +band mm6 qf1 qf1 116779646 122643059 gneg +band mm6 qf2 qf2 122643059 125086148 gpos33 +band mm6 qf3 qf3 125086148 131926797 gneg +band mm6 qg1 qg1 131926797 139256063 gpos66 +band mm6 qg2 qg2 139256063 142676388 gneg +band mm6 qg3 qg3 142676388 149517037 gpos33 +band mm7 qa1 qa1 0 15943333 gpos100 +band mm7 qa2 qa2 15943333 19131999 gneg +band mm7 qa3 qa3 19131999 29760888 gpos33 +band mm7 qb1 qb1 29760888 36138221 gneg +band mm7 qb2 qb2 36138221 39326888 gpos33 +band mm7 qb3 qb3 39326888 49955776 gneg +band mm7 qb4 qb4 49955776 56864554 gpos33 +band mm7 qb5 qb5 56864554 63773332 gneg +band mm7 qc qc 63773332 74933665 gpos100 +band mm7 qd1 qd1 74933665 80779554 gneg +band mm7 qd2 qd2 80779554 84499665 gpos66 +band mm7 qd3 qd3 84499665 94597109 gneg +band mm7 qe1 qe1 94597109 104694553 gpos100 +band mm7 qe2 qe2 104694553 107351775 gneg +band mm7 qe3 qe3 107351775 116917775 gpos33 +band mm7 qf1 qf1 116917775 124357997 gneg +band mm7 qf2 qf2 124357997 129140997 gpos33 +band mm7 qf3 qf3 129140997 144021442 gneg +band mm7 qf4 qf4 144021442 147741553 gpos33 +band mm7 qf5 qf5 147741553 152524553 gneg +band mm8 qa1.1 qa1.1 0 16228701 gpos100 +band mm8 qa1.2 qa1.2 16228701 17183331 gneg +band mm8 qa1.3 qa1.3 17183331 20524534 gpos33 +band mm8 qa2 qa2 20524534 30070829 gneg +band mm8 qa3 qa3 30070829 34366662 gpos33 +band mm8 qa4 qa4 34366662 44867586 gneg +band mm8 qb1.1 qb1.1 44867586 49163419 gpos66 +band mm8 qb1.2 qb1.2 49163419 51072678 gneg +band mm8 qb1.3 qb1.3 51072678 56800455 gpos66 +band mm8 qb2 qb2 56800455 60618973 gneg +band mm8 qb3.1 qb3.1 60618973 68256009 gpos100 +band mm8 qb3.2 qb3.2 68256009 69210638 gneg +band mm8 qb3.3 qb3.3 69210638 75893045 gpos100 +band mm8 qc1 qc1 75893045 81620822 gneg +band mm8 qc2 qc2 81620822 86393969 gpos33 +band mm8 qc3 qc3 86393969 91644432 gneg +band mm8 qc4 qc4 91644432 93076376 gpos33 +band mm8 qc5 qc5 93076376 97372209 gneg +band mm8 qd1 qd1 97372209 105009245 gpos100 +band mm8 qd2 qd2 105009245 105963874 gneg +band mm8 qd3 qd3 105963874 112646281 gpos33 +band mm8 qe1 qe1 112646281 126011094 gneg +band mm8 qe2 qe2 126011094 131738871 gpos33 +band mm9 qa1 qa1 0 14352094 gpos100 +band mm9 qa2 qa2 14352094 19444773 gneg +band mm9 qa3 qa3 19444773 24074481 gpos33 +band mm9 qa4 qa4 24074481 37963604 gneg +band mm9 qa5.1 qa5.1 37963604 43982225 gpos66 +band mm9 qa5.2 qa5.2 43982225 46297079 gneg +band mm9 qa5.3 qa5.3 46297079 54630553 gpos66 +band mm9 qb qb 54630553 62964027 gneg +band mm9 qc qc 62964027 69445618 gpos33 +band mm9 qd qd 69445618 77316122 gneg +band mm9 qe1 qe1 77316122 82408800 gpos33 +band mm9 qe2 qe2 82408800 84260683 gneg +band mm9 qe3.1 qe3.1 84260683 90742275 gpos100 +band mm9 qe3.2 qe3.2 90742275 91205245 gneg +band mm9 qe3.3 qe3.3 91205245 100464661 gpos100 +band mm9 qe4 qe4 100464661 101390603 gpos66 +band mm9 qf1 qf1 101390603 107872194 gneg +band mm9 qf2 qf2 107872194 110650019 gpos33 +band mm9 qf3 qf3 110650019 119446464 gneg +band mm9 qf4 qf4 119446464 124076172 gpos33 +band mmX qa1.1 qa1.1 0 15368327 gpos100 +band mmX qa1.2 qa1.2 15368327 17769628 gneg +band mmX qa1.3 qa1.3 17769628 20651189 gpos33 +band mmX qa2 qa2 20651189 27374832 gneg +band mmX qa3.1 qa3.1 27374832 32657694 gpos66 +band mmX qa3.2 qa3.2 32657694 33618215 gneg +band mmX qa3.3 qa3.3 33618215 38901077 gpos66 +band mmX qa4 qa4 38901077 46585241 gneg +band mmX qa5 qa5 46585241 54749664 gpos66 +band mmX qa6 qa6 54749664 61473308 gneg +band mmX qa7.1 qa7.1 61473308 67716690 gpos66 +band mmX qa7.2 qa7.2 67716690 69157471 gneg +band mmX qa7.3 qa7.3 69157471 75400854 gpos66 +band mmX qb qb 75400854 80203456 gneg +band mmX qc1 qc1 80203456 88848140 gpos100 +band mmX qc2 qc2 88848140 89808660 gneg +band mmX qc3 qc3 89808660 98453344 gpos100 +band mmX qd qd 98453344 107098028 gneg +band mmX qe1 qe1 107098028 117183493 gpos100 +band mmX qe2 qe2 117183493 118144013 gneg +band mmX qe3 qe3 118144013 131591300 gpos100 +band mmX qf1 qf1 131591300 137834682 gneg +band mmX qf2 qf2 137834682 145038586 gpos33 +band mmX qf3 qf3 145038586 152242489 gneg +band mmX qf4 qf4 152242489 159446392 gpos33 +band mmX qf5 qf5 159446392 166650296 gneg +band mmY qa1 qa1 0 3578074 gpos100 +band mmY qa2 qa2 3578074 5665285 gpos66 +band mmY qb qb 5665285 7851886 gpos33 +band mmY qc1 qc1 7851886 9442142 gpos100 +band mmY qc2 qc2 9442142 10734224 gpos33 +band mmY qc3 qc3 10734224 12523262 gpos100 +band mmY qd qd 12523262 14411690 gpos33 +band mmY qe qe 14411690 15902555 gpos66 diff -r a64dc31ab7f2 -r 740057a5126d karyotype/karyotype.oryzasativa.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/karyotype/karyotype.oryzasativa.txt Fri May 01 07:28:50 2020 -0400 @@ -0,0 +1,16 @@ +# Oryza sativa Msu Release 7 PlantGDB v187 22 Feb 2012 +# http://www.plantgdb.org/OsGDB/ +chr - os1 1 0 43270923 chr1 +chr - os2 2 0 35937250 chr2 +chr - os3 3 0 36413819 chr3 +chr - os4 4 0 35502694 chr4 +chr - os5 5 0 29958434 chr5 +chr - os6 6 0 31248787 chr6 +chr - os7 7 0 29697621 chr7 +chr - os8 8 0 28443022 chr8 +chr - os9 9 0 23012720 chr9 +chr - os10 10 0 23207287 chr10 +chr - os11 11 0 29021106 chr11 +chr - os12 12 0 27531856 chr12 +chr - os13 13 0 633585 chr13 +chr - os14 14 0 592136 chr14 diff -r a64dc31ab7f2 -r 740057a5126d karyotype/karyotype.rat.rn4.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/karyotype/karyotype.rat.rn4.txt Fri May 01 07:28:50 2020 -0400 @@ -0,0 +1,267 @@ +chr - rn1 1 0 267910886 chr1 +chr - rn2 2 0 258207540 chr2 +chr - rn3 3 0 171063335 chr3 +chr - rn4 4 0 187126005 chr4 +chr - rn5 5 0 173096209 chr5 +chr - rn6 6 0 147636619 chr6 +chr - rn7 7 0 143002779 chr7 +chr - rn8 8 0 129041809 chr8 +chr - rn9 9 0 113440463 chr9 +chr - rn10 10 0 110718848 chr10 +chr - rn11 11 0 87759784 chr11 +chr - rn12 12 0 46782294 chr12 +chr - rn13 13 0 111154910 chr13 +chr - rn14 14 0 112194335 chr14 +chr - rn15 15 0 109758846 chr15 +chr - rn16 16 0 90238779 chr16 +chr - rn17 17 0 97296363 chr17 +chr - rn18 18 0 87265094 chr18 +chr - rn19 19 0 59218465 chr19 +chr - rn20 20 0 55268282 chr20 +chr - rnX x 0 160699376 chrx +band rn1 p13 p13 0 10142096 gneg +band rn1 p12 p12 10142096 24272657 gvar +band rn1 p11 p11 24272657 38517175 gneg +band rn1 q11 q11 38517175 48659271 gpos +band rn1 q12 q12 48659271 69741157 gneg +band rn1 q21 q21 69741157 90025350 gpos +band rn1 q22 q22 90025350 123756368 gneg +band rn1 q31 q31 123756368 141191657 gpos +band rn1 q32 q32 141191657 162273543 gneg +band rn1 q33 q33 162273543 170478385 gpos +band rn1 q34 q34 170478385 174466850 gneg +band rn1 q35 q35 174466850 179822789 gpos +band rn1 q36 q36 179822789 187913675 gneg +band rn1 q37 q37 187913675 190762578 gpos +band rn1 q41 q41 190762578 204893140 gneg +band rn1 q42 q42 204893140 207400175 gpos +band rn1 q43 q43 207400175 223240078 gneg +band rn1 q51 q51 223240078 231330964 gpos +band rn1 q52 q52 231330964 239421850 gneg +band rn1 q53 q53 239421850 245575482 gpos +band rn1 q54 q54 245575482 253666368 gneg +band rn1 q55 q55 253666368 267910886 gvar +band rn10 q11 q11 0 6254774 gpos +band rn10 q12 q12 6254774 26232711 gneg +band rn10 q21 q21 26232711 34821357 gpos +band rn10 q22 q22 34821357 47517616 gneg +band rn10 q23 q23 47517616 49851488 gpos +band rn10 q24 q24 49851488 63761360 gneg +band rn10 q25 q25 63761360 66468650 gpos +band rn10 q26 q26 66468650 83085813 gneg +band rn10 q31 q31 83085813 88033620 gpos +band rn10 q32.1 q32.1 88033620 103717234 gneg +band rn10 q32.2 q32.2 103717234 105397621 gpos +band rn10 q32.3 q32.3 105397621 110718848 gneg +band rn11 p12 p12 0 6656992 gvar +band rn11 p11 p11 6656992 15001672 gneg +band rn11 q11 q11 15001672 36660337 gpos +band rn11 q12 q12 36660337 48380393 gneg +band rn11 q21 q21 48380393 64975993 gpos +band rn11 q22 q22 64975993 76696050 gneg +band rn11 q23 q23 76696050 87759784 gpos +band rn12 p12 p12 0 5483638 gvar +band rn12 p11 p11 5483638 12566672 gneg +band rn12 q11 q11 12566672 18678644 gpos +band rn12 q12 q12 18678644 26846981 gneg +band rn12 q13 q13 26846981 28446376 gpos +band rn12 q14 q14 28446376 32501984 gneg +band rn12 q15 q15 32501984 33930015 gpos +band rn12 q16 q16 33930015 46782294 gneg +band rn13 p13 p13 0 17399939 gneg +band rn13 p12 p12 17399939 22926979 gvar +band rn13 p11 p11 22926979 30194013 gneg +band rn13 q11 q11 30194013 40019861 gpos +band rn13 q12 q12 40019861 42988086 gneg +band rn13 q13 q13 42988086 55679807 gpos +band rn13 q21 q21 55679807 71749163 gpos +band rn13 q22 q22 71749163 80142075 gneg +band rn13 q23 q23 80142075 83007948 gpos +band rn13 q24 q24 83007948 91093802 gneg +band rn13 q25 q25 91093802 93959675 gpos +band rn13 q26 q26 93959675 105627870 gneg +band rn13 q27 q27 105627870 111154910 gpos +band rn14 p22 p22 0 21145501 gneg +band rn14 p21 p21 21145501 31410307 gpos +band rn14 p11 p11 31410307 49271071 gneg +band rn14 q11 q11 49271071 68671555 gpos +band rn14 q21 q21 68671555 94949460 gpos +band rn14 q22 q22 94949460 112194335 gneg +band rn15 p16 p16 0 14498477 gneg +band rn15 p15 p15 14498477 17183380 gpos +band rn15 p14 p14 17183380 31681858 gneg +band rn15 p13 p13 31681858 34366761 gneg +band rn15 p12 p12 34366761 47791278 gvar +band rn15 p11 p11 47791278 54235046 gneg +band rn15 q11 q11 54235046 60356625 gpos +band rn15 q12 q12 60356625 71848011 gneg +band rn15 q21 q21 71848011 86776073 gpos +band rn15 q22 q22 86776073 91716295 gneg +band rn15 q23 q23 91716295 99341421 gpos +band rn15 q24 q24 99341421 106214773 gneg +band rn15 q25 q25 106214773 109758846 gpos +band rn16 p16 p16 0 10244998 gneg +band rn16 p15 p15 10244998 12107726 gpos +band rn16 p14 p14 12107726 25043330 gneg +band rn16 p13 p13 25043330 29389694 gneg +band rn16 p12 p12 29389694 34977875 gvar +band rn16 p11 p11 34977875 42325298 gneg +band rn16 q11 q11 42325298 51535449 gpos +band rn16 q12.1 q12.1 51535449 58882872 gneg +band rn16 q12.2 q12.2 58882872 61780448 gpos +band rn16 q12.3 q12.3 61780448 69231356 gneg +band rn16 q12.4 q12.4 69231356 71818477 gpos +band rn16 q12.5 q12.5 71818477 90238779 gneg +band rn17 p14 p14 0 22957568 gneg +band rn17 p13 p13 22957568 25253325 gneg +band rn17 p12 p12 25253325 42744806 gvar +band rn17 p11 p11 42744806 48648181 gneg +band rn17 q11 q11 48648181 54442234 gpos +band rn17 q12.1 q12.1 54442234 73136254 gneg +band rn17 q12.2 q12.2 73136254 75869298 gpos +band rn17 q12.3 q12.3 75869298 97296363 gneg +band rn18 p13 p13 0 10604365 gneg +band rn18 p12 p12 10604365 27505073 gvar +band rn18 p11 p11 27505073 37336204 gneg +band rn18 q11 q11 37336204 51033510 gpos +band rn18 q12.1 q12.1 51033510 67602832 gneg +band rn18 q12.2 q12.2 67602832 71469007 gpos +band rn18 q12.3 q12.3 71469007 82846608 gneg +band rn18 q13 q13 82846608 87265094 gpos +band rn19 p14 p14 0 4060256 gneg +band rn19 p13 p13 4060256 10571989 gneg +band rn19 p12 p12 10571989 12257379 gvar +band rn19 p11 p11 12257379 22369717 gneg +band rn19 q11 q11 22369717 35469792 gpos +band rn19 q12 q12 35469792 59218465 gneg +band rn2 q11 q11 0 15886252 gpos +band rn2 q12 q12 15886252 34569380 gneg +band rn2 q13 q13 34569380 37030630 gpos +band rn2 q14 q14 37030630 47770632 gneg +band rn2 q15 q15 47770632 50903132 gpos +band rn2 q16 q16 50903132 63656884 gneg +band rn2 q21 q21 63656884 72830636 gpos +band rn2 q22 q22 72830636 84801263 gneg +band rn2 q23 q23 84801263 97555015 gpos +band rn2 q24 q24 97555015 117468768 gneg +band rn2 q25 q25 117468768 126642519 gpos +band rn2 q26 q26 126642519 145437522 gneg +band rn2 q31 q31 145437522 159310024 gpos +band rn2 q32 q32 159310024 171280651 gneg +band rn2 q33 q33 171280651 174525027 gpos +band rn2 q34 q34 174525027 205178781 gneg +band rn2 q41 q41 205178781 219051283 gneg +band rn2 q42 q42 219051283 227106285 gpos +band rn2 q43 q43 227106285 235049411 gneg +band rn2 q44 q44 235049411 246236913 gneg +band rn2 q45 q45 246236913 258207540 gvar +band rn20 p12 p12 0 15959251 gvar +band rn20 p11 p11 15959251 26670159 gneg +band rn20 q11 q11 26670159 38023721 gpos +band rn20 q12 q12 38023721 45735574 gneg +band rn20 q13 q13 45735574 55268282 gpos +band rn3 p13 p13 0 5305065 gneg +band rn3 p12 p12 5305065 11010513 gvar +band rn3 p11 p11 11010513 16315578 gneg +band rn3 q11 q11 16315578 21320357 gpos +band rn3 q12 q12 21320357 39137369 gneg +band rn3 q21 q21 39137369 54151705 gpos +band rn3 q22 q22 54151705 55853329 gneg +band rn3 q23 q23 55853329 60557821 gpos +band rn3 q24 q24 60557821 78374833 gneg +band rn3 q31 q31 78374833 88284295 gpos +band rn3 q32 q32 88284295 91187067 gneg +band rn3 q33 q33 91187067 96191846 gpos +band rn3 q34 q34 96191846 99695191 gneg +band rn3 q35 q35 99695191 112207137 gpos +band rn3 q36 q36 112207137 128222429 gneg +band rn3 q41 q41 128222429 145338772 gneg +band rn3 q42 q42 145338772 165658174 gpos +band rn3 q43 q43 165658174 171063335 gneg +band rn4 q11 q11 0 15612157 gpos +band rn4 q12 q12 15612157 25397242 gneg +band rn4 q13 q13 25397242 31993929 gpos +band rn4 q21 q21 31993929 46176804 gpos +band rn4 q22 q22 46176804 69595041 gneg +band rn4 q23 q23 69595041 72343661 gpos +band rn4 q24 q24 72343661 92683444 gneg +band rn4 q31 q31 92683444 102908308 gpos +band rn4 q32 q32 102908308 104447535 gneg +band rn4 q33 q33 104447535 112253614 gpos +band rn4 q34 q34 112253614 136991188 gneg +band rn4 q41 q41 136991188 146776273 gneg +band rn4 q42 q42 146776273 170194509 gpos +band rn4 q43 q43 170194509 174152521 gneg +band rn4 q44 q44 174152521 187126005 gneg +band rn5 q11 q11 0 12292177 gpos +band rn5 q12 q12 12292177 20226219 gneg +band rn5 q13 q13 20226219 34529844 gpos +band rn5 q21 q21 34529844 51627145 gpos +band rn5 q22 q22 51627145 66824746 gneg +band rn5 q23 q23 66824746 69618423 gpos +band rn5 q24 q24 69618423 85486507 gneg +band rn5 q31 q31 85486507 104595256 gpos +band rn5 q32 q32 104595256 112194056 gneg +band rn5 q33 q33 112194056 123257016 gpos +band rn5 q34 q34 123257016 128509128 gneg +band rn5 q35 q35 128509128 135213952 gpos +band rn5 q36 q36 135213952 173096209 gneg +band rn6 q11 q11 0 3920547 gpos +band rn6 q12 q12 3920547 21058941 gneg +band rn6 q13 q13 21058941 25091504 gpos +band rn6 q14 q14 25091504 36629115 gneg +band rn6 q15 q15 36629115 40661678 gpos +band rn6 q16 q16 40661678 55783790 gneg +band rn6 q21 q21 55783790 67769464 gpos +band rn6 q22 q22 67769464 72138074 gneg +band rn6 q23 q23 72138074 83787701 gpos +band rn6 q24 q24 83787701 107647034 gneg +band rn6 q31 q31 107647034 119632707 gpos +band rn6 q32 q32 119632707 139571492 gneg +band rn6 q33 q33 139571492 147636619 gpos +band rn7 q11 q11 0 15273239 gpos +band rn7 q12 q12 15273239 18101617 gneg +band rn7 q13 q13 18101617 41068044 gpos +band rn7 q21 q21 41068044 52268420 gpos +band rn7 q22 q22 52268420 76479334 gneg +band rn7 q31 q31 76479334 91752574 gpos +band rn7 q32 q32 91752574 94580951 gneg +band rn7 q33 q33 94580951 104649976 gpos +band rn7 q34 q34 104649976 128860890 gneg +band rn7 q35 q35 128860890 136101537 gpos +band rn7 q36 q36 136101537 143002779 gneg +band rn8 q11 q11 0 11874368 gpos +band rn8 q12 q12 11874368 16813265 gneg +band rn8 q13 q13 16813265 31735037 gpos +band rn8 q21 q21 31735037 40351836 gpos +band rn8 q22 q22 40351836 48968634 gneg +band rn8 q23 q23 48968634 54222779 gpos +band rn8 q24 q24 54222779 82279915 gneg +band rn8 q31 q31 82279915 106554067 gpos +band rn8 q32 q32 106554067 129041809 gneg +band rn9 q11 q11 0 7255483 gpos +band rn9 q12 q12 7255483 17060190 gneg +band rn9 q13 q13 17060190 28237556 gpos +band rn9 q21 q21 28237556 41866100 gpos +band rn9 q22 q22 41866100 52357136 gneg +band rn9 q31 q31 52357136 62063796 gpos +band rn9 q32 q32 62063796 70103656 gneg +band rn9 q33 q33 70103656 78535705 gpos +band rn9 q34 q34 78535705 83732200 gneg +band rn9 q35 q35 83732200 90007212 gpos +band rn9 q36 q36 90007212 101184578 gneg +band rn9 q37 q37 101184578 107459591 gpos +band rn9 q38 q38 107459591 113440463 gneg +band rnX q11 q11 0 7738332 gpos +band rnX q12 q12 7738332 21538359 gneg +band rnX q13 q13 21538359 29792580 gpos +band rnX q14 q14 29792580 39465496 gneg +band rnX q21 q21 39465496 59585161 gpos +band rnX q22 q22 59585161 81252493 gneg +band rnX q31 q31 81252493 100985241 gpos +band rnX q32 q32 100985241 112463768 gneg +band rnX q33 q33 112463768 115688074 gpos +band rnX q34 q34 115688074 122523601 gneg +band rnX q35 q35 122523601 135420822 gpos +band rnX q36 q36 135420822 149220849 gneg +band rnX q37 q37 149220849 160699376 gpos diff -r a64dc31ab7f2 -r 740057a5126d karyotype/karyotype.sorghum.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/karyotype/karyotype.sorghum.txt Fri May 01 07:28:50 2020 -0400 @@ -0,0 +1,14 @@ +# Sorghum bicolor Sbi1/Sbi1.4/SbGDB v181 23 Dec 2010 +# http://www.plantgdb.org/SbGDB/ +chr - sb1 1 0 73840631 chr1 +chr - sb2 2 0 77932606 chr2 +chr - sb3 3 0 74441160 chr3 +chr - sb4 4 0 68034345 chr4 +chr - sb5 5 0 62352331 chr5 +chr - sb6 6 0 62208784 chr6 +chr - sb7 7 0 64342021 chr7 +chr - sb8 8 0 55460251 chr8 +chr - sb9 9 0 59635592 chr9 +chr - sb10 10 0 60981646 chr10 +# chromosome 11 is composed of 88 unanchored scaffolds with 200 N spacing +chr - sb11 11 0 40203219 chr11 diff -r a64dc31ab7f2 -r 740057a5126d karyotype/karyotype.yeast.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/karyotype/karyotype.yeast.txt Fri May 01 07:28:50 2020 -0400 @@ -0,0 +1,17 @@ +chr - chrI I 0 230218 chr1 +chr - chrII II 0 813184 chr2 +chr - chrIII III 0 316620 chr3 +chr - chrIV IV 0 1531933 chr4 +chr - chrV V 0 576874 chr5 +chr - chrVI VI 0 270161 chr6 +chr - chrVII VII 0 1090940 chr7 +chr - chrVIII VIII 0 562643 chr8 +chr - chrIX IX 0 439888 chr9 +chr - chrX X 0 745751 chr10 +chr - chrXI XI 0 666816 chr11 +chr - chrXII XII 0 1078177 chr12 +chr - chrXIII XIII 0 924431 chr13 +chr - chrXIV XIV 0 784333 chr14 +chr - chrXV XV 0 1091291 chr15 +chr - chrXVI XVI 0 948066 chr16 +chr - chrM M 0 85779 chrM diff -r a64dc31ab7f2 -r 740057a5126d karyotype/karyotype.zeamays.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/karyotype/karyotype.zeamays.txt Fri May 01 07:28:50 2020 -0400 @@ -0,0 +1,14 @@ +# Zea mays B73 RefGen v2 +# http://www.plantgdb.org/ZmGDB/ +chr - zm1 1 0 301354135 chr1 +chr - zm2 2 0 237068873 chr2 +chr - zm3 3 0 232140174 chr3 +chr - zm4 4 0 241473504 chr4 +chr - zm5 5 0 217872852 chr5 +chr - zm6 6 0 169174353 chr6 +chr - zm7 7 0 176764762 chr7 +chr - zm8 8 0 175793759 chr8 +chr - zm9 9 0 156750706 chr9 +chr - zm10 10 0 150189435 chr10 +# chromosome 11 is ChrUnkown - unanchored contigs with 100 n spacer +chr - zm11 11 0 7140151 chr11 diff -r a64dc31ab7f2 -r 740057a5126d macros.xml --- a/macros.xml Thu Jan 23 07:27:22 2020 -0500 +++ b/macros.xml Fri May 01 07:28:50 2020 -0400 @@ -2,7 +2,7 @@ 0.69.8 - @CIRCOS_VERSION@+galaxy4 + @CIRCOS_VERSION@+galaxy5 @@ -12,6 +12,8 @@ biopython pybigwig circos-tools + grep + gawk tar @@ -80,6 +82,23 @@ + + + + + + + + + + + + - + - + token_label="Color" + token_help=""> + @@ -141,9 +161,11 @@ - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
- - - - + + - +
- - - + + +
@@ -190,20 +255,22 @@ - - - + - - + + + + - + - + + + @@ -256,14 +323,24 @@ + + + + + + + + + + @@ -271,17 +348,33 @@ - - - + + + - - - + + + + + + + + + + + + + + + + + + +
+ + + + + + + + + + + + + + + + + + + + + + + + +
@@ -359,46 +478,36 @@ - + + + - + + + - - - - - - - - - - - - - - - + - + - + - + diff -r a64dc31ab7f2 -r 740057a5126d macros_conffiles.xml --- a/macros_conffiles.xml Thu Jan 23 07:27:22 2020 -0500 +++ b/macros_conffiles.xml Fri May 01 07:28:50 2020 -0400 @@ -7,6 +7,11 @@ <> <> +max_ticks* = ${limits.max_ticks} +max_ideograms* = ${limits.max_ideograms} +max_links* = ${limits.max_links} +max_points_per_track* = ${limits.max_points_per_track} + <> @@ -50,7 +55,8 @@ svg = yes #end if # by default angle = 0 is at 3 o'clock position - angle_offset = -90 + angle_offset = ${ideogram.angle_offset} + angle_orientation = ${ideogram.angle_orientation} auto_alpha_colors = yes auto_alpha_steps = 5 #if str($plot_options.background.background_select) == 'transparent': @@ -61,10 +67,20 @@ radius* = ${plot_options.radius}p + + #for zoom in $scaling.zooms: + + chr = ${zoom.chr} + start = ${zoom.start}u + end = ${zoom.end}u + scale = ${zoom.scale} + + #end for + + <> <> <> -<> <> ]]> @@ -73,7 +89,7 @@ - spacing = ${tick_group.spacing} + spacing = ${tick_group.spacing}u size = ${tick_group.size}p show_label = ${tick_group.ticks.show_tick_labels} color = $circosColor($tick_group.color) @@ -131,7 +147,13 @@ ## spacing between ideograms - default = ${ideogram.spacing}r + default = ${ideogram.spacing}u + + #for pairwise in $ideogram.pairwise_spacing + + spacing = ${pairwise.spacing}u + + #end for # ideogram position, thickness and fill @@ -143,7 +165,7 @@ label_size = ${ideogram.ideogram_labels.size} label_parallel = ${ideogram.ideogram_labels.parallel} - #if $ideogram.bands.bands: + #if $ideogram.bands.show_bands: show_bands = yes #else show_bands = no @@ -157,77 +179,6 @@ ]]> - - -#for $hi, $data in enumerate($sec_highlight.data): - - file = data/highlight-${hi}.txt # ${data.data_source.element_identifier} - r1 = ${data.r1}r - r0 = ${data.r0}r - fill_color = $circosColorAlpha($data.fill_color, $data.fill_color_alpha) - stroke_color = $circosColorAlpha($data.stroke_color, $data.stroke_color_alpha) - stroke_thickness = ${data.stroke_thickness} - - - #for $rule in $data.sec_rule.rules: - - #for $condition in $rule.conditions - #if str($condition.application.application_select) == "1": - condition = 1 - #elif str($condition.application.application_select) == "on": - condition = on($condition.application.on_genomes) - #elif str($condition.application.application_select) == "pos": - #if $condition.application.pos_gt: - condition = var(start) > $condition.application.pos_gt - #end if - - #if $condition.application.pos_lt: - #if $condition.application.pos_lt_sub == 'yes': - condition = var(end) < chrlen(var(chr)) - $condition.application.pos_lt - #else - condition = var(end) < $condition.application.pos_lt - #end if - #end if - #elif str($condition.application.application_select) == "value": - #if $condition.application.pos_gt: - condition = var(value) > $condition.application.pos_gt - #end if - - #if $condition.application.pos_lt: - condition = var(value) < $condition.application.pos_lt - #end if - #elif str($condition.application.application_select) == "var": - condition = var(${condition.application.varname}) ${condition.application.cond_select} "${condition.application.varvalue}" - #elif str($condition.application.application_select) == "random": - condition = rand() < ${condition.application.value} - #end if - #end for - - #for $action in $rule.actions: - #if str($action.action.action_select) == "fill_color_value" or str($action.action.action_select) == "color_value" : - #set x_fill_color = $action.action.action_value - #set x_fill_color_count = int(str($x_fill_color).split('-')[1]) - #set x_min = $x_fill_color_count if $action.action.invert else 1 - #set x_max = 1 if $action.action.invert else $x_fill_color_count - #set color_action = "fill_color" if str($plot_type) in ('histogram', 'histogram-stacked') else "color" - - $color_action = eval(sprintf("${action.action.action_value}-%d", remap_int(var(value), ${action.action.min_value}, ${action.action.max_value}, ${x_min}, ${x_max}))) - #else - $action.action.action_select = $circosColor($action.action.action_value) - #end if - #end for - $rule.continue_flow - - #end for - - -#end for - - ]]> - - # Workaround for above commented colour bug. condition = 1 - fill_color = $circosColor($data.plot_format.format_specific.fill_color) + fill_color = $circosColorAlpha($data.plot_format.format_specific.fill_color, $data.plot_format.format_specific.fill_color_alpha) flow = continue #end if #for $rule in $data.sec_rule.rules: #for $condition in $rule.conditions - #if str($condition.application.application_select) == "1": + #set cond = $condition.application.application_select + #if $cond == "always": condition = 1 - #elif str($condition.application.application_select) == "on": + #elif $cond == 'random' + condition = rand() < ${condition.application.value} + #elif $cond == "on": #set on_str = ' '.join([ "on(%s)" % $chr.strip() for $chr in $condition.application.on_genomes.split(',') ]) condition = $on_str - #elif str($condition.application.application_select) == "pos": - #if $condition.application.pos_gt: + #elif $cond == "pos": + #if str($condition.application.pos_gt) != '': condition = var(start) > $condition.application.pos_gt #end if - #if $condition.application.pos_lt: + #if str($condition.application.pos_lt) != '': condition = var(start) < $condition.application.pos_lt #end if - #elif str($condition.application.application_select) == "value": - #if $condition.application.pos_gt: + #elif $cond == "value": + #if str($condition.application.pos_gt) != '': condition = var(value) > $condition.application.pos_gt #end if - #if $condition.application.pos_lt: + #if str($condition.application.pos_lt) != '': condition = var(value) < $condition.application.pos_lt #end if - #elif str($condition.application.application_select) == "var": + #elif $cond == "var": condition = var(${condition.application.varname}) ${condition.application.cond_select} "${condition.application.varvalue}" + #else + condition = 0 # Error: the Galaxy devs forgot a case #end if #end for @@ -386,22 +359,39 @@ + #if str($data.sec_axes.only_if_data) == "data": + show = data + #end if #for $axis in $data.sec_axes.axes: - color = $circosColor($axis.color) + color = $circosColorAlpha($axis.color, $axis.color_alpha) thickness = ${axis.thickness} - spacing = ${axis.spacing}r + #if str($axis.radial_position.select) == 'plot': + spacing = ${axis.radial_position.spacing}r y0 = ${axis.y0}r y1 = ${axis.y1}r + #else: + spacing = ${axis.radial_position.spacing} + y0 = ${axis.y0} + y1 = ${axis.y1} + #end if #end for + #if str($data.sec_bkgs.only_if_data) == "data": + show = data + #end if #for $bkg in $data.sec_bkgs.backgrounds: - color = $circosColor($bkg.color) - y0 = ${bkg.y0}r - y1 = ${bkg.y1}r + color = $circosColorAlpha($bkg.color, $bkg.color_alpha) + #if str($bkg.radial_position.select) == 'plot': + y0 = ${bkg.radial_position.y0}r + y1 = ${bkg.radial_position.y1}r + #else: + y0 = ${bkg.radial_position.y0} + y1 = ${bkg.radial_position.y1} + #end if #end for @@ -419,7 +409,9 @@ file = data/links-${hi}.txt # ${data.data_source.element_identifier} radius = ${data.radius}r + z = ${data.zdepth} ribbon = ${data.linktype.ribbon} + minsize = ${data.minsize}u #if $data.linktype.ribbon == 'yes' ${data.linktype.twist} #if $data.linktype.pattern != 'solid': @@ -437,34 +429,30 @@ perturb_bezier_radius = ${data.advanced.perturbation.perturb_bezier_radius_min},${data.advanced.perturbation.perturb_bezier_radius_max} perturb_bezier_radius_purity = ${data.advanced.perturbation.perturb_bezier_radius_purity_min},${data.advanced.perturbation.perturb_bezier_radius_purity_max} #end if - #if $data.advanced.zdepth - z = ${data.advanced.zdepth} - #end if #for $rule in $data.sec_link_rule.rules: #for $condition in $rule.conditions #set cond = $condition.application.application_select - #if $cond == 'interchr' or $cond == 'intrachr' or $cond == 'inv' or $cond == 'rev' - condition = var($cond) - #elif $cond == 'always' + #if $cond == 'always' condition = 1 #elif $cond == 'random' condition = rand() < ${condition.application.value} + #elif $cond == 'interchr' or $cond == 'intrachr' or $cond == 'inv' or $cond == 'rev' + condition = var($cond) #else #set op = $condition.application.comparison.compare #set val = $condition.application.comparison.compval #if $cond == 'chr' #if $op == 'between' or $op == 'fromto' #set val2 = $condition.application.comparison.compval2 - #set c=''.join([str($op),"(",str($val),",",str($val2),")"]) + condition = ${op}(${val}, ${val2}) #elif $op == 'on' - #set c='(var(chr1) eq "%s" or var(chr2) eq "%s")' % (str($val), str($val)) + condition = var(chr1) eq "${val}" or var(chr2) eq "${val}" #else - #set c=''.join([str($op),"(",str($val),")"]) + condition = ${op}(${val}) #end if - condition = $c #else #if $cond == 'dist' and $op == 'lt' condition = abs(var(pos1) - var(pos2)) < $val @@ -481,30 +469,27 @@ #for $action in $rule.actions: #set actiontype = $action.action.action_select - #if $actiontype == 'color': + #if $actiontype in ('color', 'stroke_color'): #if $action.action.dynamic.dynamic_select == "static": #set actionval = $circosColorAlpha($action.action.dynamic.action_value, $action.action.dynamic.action_value_alpha) $actiontype = $actionval - #else - #set x_fill_color = $action.action.dynamic.action_value - #set x_fill_color_count = int(str($x_fill_color).split('-')[1]) - #set x_min = $x_fill_color_count if $action.action.dynamic.invert else 1 - #set x_max = 1 if $action.action.dynamic.invert else $x_fill_color_count - - $actiontype = eval(sprintf("${action.action.dynamic.action_value}-%d", remap_int(var(value), ${action.action.dynamic.min_value}, ${action.action.dynamic.max_value}, ${x_min}, ${x_max}))) + #elif $action.action.dynamic.dynamic_select == 'source': + $actiontype = eval(var(chr1)) + #elif $action.action.dynamic.dynamic_select == 'dest': + $actiontype = eval(var(chr2)) #end if #elif $actiontype == 'z': #if $action.action.dynamic.dynamic_select == "static": - #set actionval = $action.action.dynamic.action_value - $actiontype = $actionval + $actiontype = ${action.action.dynamic.action_value} #else #set x_min = 1000 if $action.action.dynamic.invert else 1 #set x_max = 1 if $action.action.dynamic.invert else 1000 $actiontype = eval(remap_int(var(value), ${action.action.dynamic.min_value}, ${action.action.dynamic.max_value}, ${x_min}, ${x_max})) #end if + #elif $actiontype == 'value_from_attr': + value = var(${action.action.action_value}) #else - #set actionval = $action.action.action_value - $actiontype = $actionval + $actiontype = ${action.action.action_value} #end if #end for diff -r a64dc31ab7f2 -r 740057a5126d macros_tests.xml --- a/macros_tests.xml Thu Jan 23 07:27:22 2020 -0500 +++ b/macros_tests.xml Fri May 01 07:28:50 2020 -0400 @@ -30,14 +30,16 @@
-
- +
+ +
+
- + - + diff -r a64dc31ab7f2 -r 740057a5126d stack-histogram.py --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/stack-histogram.py Fri May 01 07:28:50 2020 -0400 @@ -0,0 +1,27 @@ +#!/usr/bin/env python +import logging +import sys + +import pyBigWig + +logging.basicConfig(level=logging.INFO) +log = logging.getLogger() + +if __name__ == "__main__": + files = sys.argv[1:] + bws = [pyBigWig.open(x) for x in files] + + # obtain some chroms. Hope all sets are identical! + k = bws[0].chroms().keys() + + # do magic? + # nah. + # just assert that intervals are identical. + # and crash otherwise. + # sorry not sorry. + + for chrom in k: + for interval_set in zip(*[bw.intervals(chrom) for bw in bws]): + (start, end) = interval_set[0][0:2] + values = ','.join(map(str, [x[2] for x in interval_set])) + sys.stdout.write("%s\t%s\t%s\t%s\n" % (chrom, start, end, values)) diff -r a64dc31ab7f2 -r 740057a5126d stack-histogram.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/stack-histogram.xml Fri May 01 07:28:50 2020 -0400 @@ -0,0 +1,35 @@ + + + reformats for use in Circos stacked histogram plots + + macros.xml + + + + '$output' + ]]> + + + + + + + + + + + + + + + diff -r a64dc31ab7f2 -r 740057a5126d test-data/0/out.png Binary file test-data/0/out.png has changed diff -r a64dc31ab7f2 -r 740057a5126d test-data/0/out.svg --- a/test-data/0/out.svg Thu Jan 23 07:27:22 2020 -0500 +++ b/test-data/0/out.svg Fri May 01 07:28:50 2020 -0400 @@ -5,17 +5,17 @@ - -ctgA - -ctgB + +ctgA + +ctgB - + - + diff -r a64dc31ab7f2 -r 740057a5126d test-data/1/out.png Binary file test-data/1/out.png has changed diff -r a64dc31ab7f2 -r 740057a5126d test-data/1/out.svg --- a/test-data/1/out.svg Thu Jan 23 07:27:22 2020 -0500 +++ b/test-data/1/out.svg Fri May 01 07:28:50 2020 -0400 @@ -5,2600 +5,2788 @@ - -ctgA + +ctgA -0.0 Mb - - - - -0.0 Mb - - - - -0.0 Mb - - - -ctgB - -0.0 Mb - +0.0 Kb + + + + + +5.0 Kb + + + + + +10.0 Kb + + + + + +15.0 Kb + + + + + +20.0 Kb + + + + + +25.0 Kb + + + + + +30.0 Kb + + + + + +35.0 Kb + + + + + +40.0 Kb + + + + + +45.0 Kb + + + + + +50.0 Kb + +ctgB + +0.0 Kb + + + + + +5.0 Kb + - - - - - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 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48 1.0,1.0,1.0 +b 48 50 1.0,1.0,1.0 +b 50 52 1.0,1.0,1.0 +b 52 54 1.0,1.0,1.0 +b 54 56 1.0,1.0,1.0 +b 56 58 0.0,0.0,0.0 +b 58 60 0.0,0.0,0.0 +b 60 62 -1.0,-1.0,-1.0 +b 62 64 -1.0,-1.0,-1.0 +b 64 66 -1.0,-1.0,-1.0 diff -r a64dc31ab7f2 -r 740057a5126d test-data/tiles/2.out --- a/test-data/tiles/2.out Thu Jan 23 07:27:22 2020 -0500 +++ b/test-data/tiles/2.out Fri May 01 07:28:50 2020 -0400 @@ -1,51 +1,51 @@ -NC_000913.3 0 4641652 name=ANONYMOUS,strand=1,value=0 -NC_000913.3 189 255 name=thrL,strand=1,value=0 -NC_000913.3 336 2799 name=thrA,strand=1,value=0 -NC_000913.3 2800 3733 name=thrB,strand=1,value=0 -NC_000913.3 3733 5020 name=thrC,strand=1,value=0 -NC_000913.3 5233 5530 name=yaaX,strand=1,value=0 -NC_000913.3 5565 5601 name=None,strand=1,value=0 -NC_000913.3 5636 5670 name=None,strand=-1,value=0 -NC_000913.3 5682 6459 name=yaaA,strand=-1,value=0 -NC_000913.3 6528 7959 name=yaaJ,strand=-1,value=0 -NC_000913.3 8237 9191 name=talB,strand=1,value=0 -NC_000913.3 9305 9893 name=mog,strand=1,value=0 -NC_000913.3 9927 10494 name=satP,strand=-1,value=0 -NC_000913.3 10642 11356 name=yaaW,strand=-1,value=0 -NC_000913.3 10829 11315 name=mbiA,strand=1,value=0 -NC_000913.3 11381 11786 name=yaaI,strand=-1,value=0 -NC_000913.3 12162 14079 name=dnaK,strand=1,value=0 -NC_000913.3 14167 15298 name=dnaJ,strand=1,value=0 -NC_000913.3 15386 16731 name=None,strand=1,value=0 -NC_000913.3 15444 16557 name=insL-1,strand=1,value=0 -NC_000913.3 16750 16960 name=mokC,strand=-1,value=0 -NC_000913.3 16750 16903 name=hokC,strand=-1,value=0 -NC_000913.3 16951 17006 name=sokC,strand=1,value=0 -NC_000913.3 17488 18655 name=nhaA,strand=1,value=0 -NC_000913.3 18714 19620 name=nhaR,strand=1,value=0 -NC_000913.3 19795 20563 name=None,strand=-1,value=0 -NC_000913.3 19810 20314 name=insB-1,strand=-1,value=0 -NC_000913.3 20232 20508 name=insA-1,strand=-1,value=0 -NC_000913.3 20814 21078 name=rpsT,strand=-1,value=0 -NC_000913.3 21180 21399 name=yaaY,strand=1,value=0 -NC_000913.3 21406 22348 name=ribF,strand=1,value=0 -NC_000913.3 22390 25207 name=ileS,strand=1,value=0 -NC_000913.3 25206 25701 name=lspA,strand=1,value=0 -NC_000913.3 25710 25746 name=None,strand=1,value=0 -NC_000913.3 25762 25796 name=None,strand=-1,value=0 -NC_000913.3 25825 26275 name=fkpB,strand=1,value=0 -NC_000913.3 26276 27227 name=ispH,strand=1,value=0 -NC_000913.3 27292 28207 name=rihC,strand=1,value=0 -NC_000913.3 28373 29195 name=dapB,strand=1,value=0 -NC_000913.3 29650 30799 name=carA,strand=1,value=0 -NC_000913.3 30816 34038 name=carB,strand=1,value=0 -NC_000913.3 34299 34695 name=caiF,strand=1,value=0 -NC_000913.3 34727 34763 name=None,strand=1,value=0 -NC_000913.3 34780 35371 name=caiE,strand=-1,value=0 -NC_000913.3 35376 36162 name=caiD,strand=-1,value=0 -NC_000913.3 36270 37824 name=caiC,strand=-1,value=0 -NC_000913.3 37897 39115 name=caiB,strand=-1,value=0 -NC_000913.3 39151 39185 name=None,strand=1,value=0 -NC_000913.3 39197 39233 name=None,strand=-1,value=0 -NC_000913.3 39243 40386 name=caiA,strand=-1,value=0 -NC_000913.3 40416 41931 name=caiT,strand=-1,value=0 +NC_000913.3 0 4641652 name=ANONYMOUS,strand=1,type=region,value=0 +NC_000913.3 189 255 name=thrL,strand=1,type=gene,value=0 +NC_000913.3 336 2799 name=thrA,strand=1,type=gene,value=0 +NC_000913.3 2800 3733 name=thrB,strand=1,type=gene,value=0 +NC_000913.3 3733 5020 name=thrC,strand=1,type=gene,value=0 +NC_000913.3 5233 5530 name=yaaX,strand=1,type=gene,value=0 +NC_000913.3 5565 5601 name=None,strand=1,type=repeat_region,value=0 +NC_000913.3 5636 5670 name=None,strand=-1,type=repeat_region,value=0 +NC_000913.3 5682 6459 name=yaaA,strand=-1,type=gene,value=0 +NC_000913.3 6528 7959 name=yaaJ,strand=-1,type=gene,value=0 +NC_000913.3 8237 9191 name=talB,strand=1,type=gene,value=0 +NC_000913.3 9305 9893 name=mog,strand=1,type=gene,value=0 +NC_000913.3 9927 10494 name=satP,strand=-1,type=gene,value=0 +NC_000913.3 10642 11356 name=yaaW,strand=-1,type=gene,value=0 +NC_000913.3 10829 11315 name=mbiA,strand=1,type=gene,value=0 +NC_000913.3 11381 11786 name=yaaI,strand=-1,type=gene,value=0 +NC_000913.3 12162 14079 name=dnaK,strand=1,type=gene,value=0 +NC_000913.3 14167 15298 name=dnaJ,strand=1,type=gene,value=0 +NC_000913.3 15386 16731 name=None,strand=1,type=mobile_genetic_element,value=0 +NC_000913.3 15444 16557 name=insL-1,strand=1,type=gene,value=0 +NC_000913.3 16750 16960 name=mokC,strand=-1,type=gene,value=0 +NC_000913.3 16750 16903 name=hokC,strand=-1,type=gene,value=0 +NC_000913.3 16951 17006 name=sokC,strand=1,type=gene,value=0 +NC_000913.3 17488 18655 name=nhaA,strand=1,type=gene,value=0 +NC_000913.3 18714 19620 name=nhaR,strand=1,type=gene,value=0 +NC_000913.3 19795 20563 name=None,strand=-1,type=mobile_genetic_element,value=0 +NC_000913.3 19810 20314 name=insB-1,strand=-1,type=gene,value=0 +NC_000913.3 20232 20508 name=insA-1,strand=-1,type=gene,value=0 +NC_000913.3 20814 21078 name=rpsT,strand=-1,type=gene,value=0 +NC_000913.3 21180 21399 name=yaaY,strand=1,type=gene,value=0 +NC_000913.3 21406 22348 name=ribF,strand=1,type=gene,value=0 +NC_000913.3 22390 25207 name=ileS,strand=1,type=gene,value=0 +NC_000913.3 25206 25701 name=lspA,strand=1,type=gene,value=0 +NC_000913.3 25710 25746 name=None,strand=1,type=repeat_region,value=0 +NC_000913.3 25762 25796 name=None,strand=-1,type=repeat_region,value=0 +NC_000913.3 25825 26275 name=fkpB,strand=1,type=gene,value=0 +NC_000913.3 26276 27227 name=ispH,strand=1,type=gene,value=0 +NC_000913.3 27292 28207 name=rihC,strand=1,type=gene,value=0 +NC_000913.3 28373 29195 name=dapB,strand=1,type=gene,value=0 +NC_000913.3 29650 30799 name=carA,strand=1,type=gene,value=0 +NC_000913.3 30816 34038 name=carB,strand=1,type=gene,value=0 +NC_000913.3 34299 34695 name=caiF,strand=1,type=gene,value=0 +NC_000913.3 34727 34763 name=None,strand=1,type=repeat_region,value=0 +NC_000913.3 34780 35371 name=caiE,strand=-1,type=gene,value=0 +NC_000913.3 35376 36162 name=caiD,strand=-1,type=gene,value=0 +NC_000913.3 36270 37824 name=caiC,strand=-1,type=gene,value=0 +NC_000913.3 37897 39115 name=caiB,strand=-1,type=gene,value=0 +NC_000913.3 39151 39185 name=None,strand=1,type=repeat_region,value=0 +NC_000913.3 39197 39233 name=None,strand=-1,type=repeat_region,value=0 +NC_000913.3 39243 40386 name=caiA,strand=-1,type=gene,value=0 +NC_000913.3 40416 41931 name=caiT,strand=-1,type=gene,value=0 diff -r a64dc31ab7f2 -r 740057a5126d tiles-from-gff3.py --- a/tiles-from-gff3.py Thu Jan 23 07:27:22 2020 -0500 +++ b/tiles-from-gff3.py Fri May 01 07:28:50 2020 -0400 @@ -24,6 +24,7 @@ "strand": 0 if not feature.location.strand else feature.location.strand, "name": feature.qualifiers.get(attr, ["None"])[0] or feature.id, "value": feature.qualifiers.get("score", [0])[0], + "type": feature.type, } line = [