Mercurial > repos > iuc > cnvkit_call
diff call.xml @ 2:0a5e2fc51dfb draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
author | iuc |
---|---|
date | Fri, 29 Sep 2023 15:40:43 +0000 |
parents | cc56d01a0b36 |
children |
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--- a/call.xml Sun May 14 21:23:36 2023 +0000 +++ b/call.xml Fri Sep 29 15:40:43 2023 +0000 @@ -4,6 +4,7 @@ <import>macros.xml</import> </macros> <expand macro="xrefs"/> + <expand macro="creators"/> <expand macro="requirements"/> <command detect_errors="exit_code"><![CDATA[ ln -s '$input_sample_file' ./tumor.cns && @@ -71,7 +72,7 @@ #end if ]]></command> <inputs> - <param name="input_sample_file" type="data" format="tabular" label="CNS file" help="" /> + <param name="input_sample_file" type="data" format="tabular" label="CN segmentation calls cns file" help="" /> <section name="additional_SNP_allelic_process" title="additional SNP b_allele frequencies process" expanded="false"> <expand macro="additionally_SNP_process" /> </section> @@ -92,7 +93,7 @@ </section> </inputs> <outputs> - <data name="out_sample_Bintest" format="tabular" label="${tool.name} on ${on_string}: Sample Bintest " from_work_dir="tumor.call.cns" /> + <data name="out_sample_Bintest" format="tabular" label="${tool.name} on ${on_string}: Rounded absolute scale copy numbers integer (not log2 ratios)" from_work_dir="tumor.call.cns" /> </outputs> <tests> <test expect_num_outputs="1">