Mercurial > repos > iuc > cnvkit_call
view test-data/ref-tas.cnn @ 3:ef7efbffb3ec draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit bced16a45d19b243a244a093c3b3504b2640d5e0
| author | iuc |
|---|---|
| date | Mon, 22 Apr 2024 17:41:43 +0000 |
| parents | 0a5e2fc51dfb |
| children |
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chromosome start end gene log2 depth spread chrM 576 848 - 3.256 91.9926 4.82735 chrM 848 1121 - 0.884565 5.9011 1.31146 chrM 1121 1394 - -0.165367 1.4359 0.245173 chrM 1394 1667 - 0.909286 3.78022 1.34811 chrM 1667 1940 - 0 1.80586 0 chrM 1940 2212 - -2.82466 0.0404412 4.18784 chrM 2212 2485 - -0.0642305 1.65201 0.0952281 chrM 2485 2758 - 0.01695 4.0696 0.0251301 chrM 2758 3031 - -0.315323 0.717949 0.467498 chrM 3031 3304 - 0.157569 1.33333 0.233612 chrM 3306 3579 - -0.387402 0.626374 0.574362 chrM 3579 3853 - 0 2.30292 0 chrM 3853 4126 - 0.202715 2.74359 0.300545 chrM 4126 4400 - -0.259225 0.748175 0.384327 chrM 4401 4695 - -0.0877248 0.94898 0.130061 chrM 4695 4990 - 0.16791 5.01695 0.248943 chrM 4990 5284 - -0.25963 1.73129 0.384927 chrM 5284 5579 - 0.810516 5.97966 1.20167 chrM 5586 5655 - -10.4795 0 15.5369 chrM 5656 5729 - 0 0 0 chrM 5760 5891 - 0.415822 1.79389 0.616498 chrM 5903 6171 - 0.131623 2.15299 0.195144 chrM 6171 6440 - 0 2.02974 0 chrM 6440 6708 - -0.0963015 1.51493 0.142777 chrM 6708 6977 - 0 2.03717 0 chrM 6977 7245 - 0.40989 3.05597 0.607703 chrM 7245 7514 - -0.047091 1.24907 0.0698171 chrM 7517 7767 - 0.271996 1.944 0.403261 chrM 7767 8018 - 0.07072 2.24701 0.104849 chrM 8018 8269 - -0.415822 1.00797 0.616498 chrM 8294 8364 - -10.0057 0 14.8345 chrM 8365 8630 - 0 1.0717 0 chrM 8630 8896 - 0.485791 2.07895 0.720233 chrM 8896 9162 - 0.280695 3.66165 0.416158 chrM 9162 9427 - 0.563397 3.60755 0.835292 chrM 9427 9693 - -0.195679 0.808271 0.290114 chrM 9693 9959 - 0 2.07143 0 chrM 9959 10224 - -4.10122 0.00377358 6.08048 chrM 10224 10490 - -0.248445 1.44361 0.368345 chrM 10490 10756 - -0.0920355 1.82331 0.136452 chrM 10756 11022 - -0.51737 1.12406 0.767054 chrM 11022 11287 - 0.26621 4.27925 0.394683 chrM 11287 11553 - 0.350607 2.93609 0.519809 chrM 11553 11819 - -0.0341651 1.06015 0.0506531 chrM 11819 12084 - 0.590516 2.40377 0.875498 chrM 12084 12350 - -1.0261 0.736842 1.5213 chrM 12350 12616 - -0.64663 0.736842 0.958694 chrM 12616 12882 - 0.295587 2.48872 0.438237 chrM 12882 13147 - 0.50247 4.50943 0.744962 chrM 13147 13413 - -0.322016 1.47368 0.477422 chrM 13413 13679 - 0.356127 2.95865 0.527993 chrM 13679 13944 - -0.0012925 1.64906 0.00191626 chrM 13944 14210 - -0.865739 0.890977 1.28355 chrM 14210 14476 - -0.4233 2.21053 0.627585 chrM 14476 14742 - 0.598181 4.45489 0.886863 chrM 14746 14987 - 1.03347 8.14523 1.53222 chrM 14987 15228 - 0.355932 2.48133 0.527704 chrM 15228 15470 - 0 1.11157 0 chrM 15470 15711 - 0.393765 3.9751 0.583796 chrM 15711 15953 - -0.312504 0.809917 0.463318 chrM 15955 16023 - 0 0 0