Mercurial > repos > iuc > cnvkit_diagram

changeset 3:27ecb3477d34 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 9d922676808c5f57e9c01b148eec6cc0a63c53e5
author iuc
date Fri, 13 Dec 2024 23:56:18 +0000
parents cd407b016741
children
files diagram.xml macros.xml
diffstat 2 files changed, 14 insertions(+), 10 deletions(-) [+]
line wrap: on
line diff
--- a/diagram.xml	Mon Apr 22 17:46:10 2024 +0000
+++ b/diagram.xml	Fri Dec 13 23:56:18 2024 +0000
@@ -57,21 +57,25 @@
     <tests>
         <test expect_num_outputs="1">
             <param name="input_cnr_file" ftype="tabular" value="tumor.cnr" />
-            <param name="segment" ftype="tabular" value="sample.cns" />
-            <param name="threshold" value="10" />
-            <param name="male_reference" value="1" />
+            <section name="advanced_settings">
+                <param name="segment" ftype="tabular" value="sample.cns" />
+                <param name="threshold" value="10" />
+                <param name="male_reference" value="1" />
+            </section>
             <output name="out_diagram_file" file="sample-diagram.pdf" ftype="pdf" compare="sim_size" > 
                 <assert_contents><has_size value="6000" delta="2000" /></assert_contents>
             </output>
         </test>
         <test expect_num_outputs="1">
-            <conditional name="Sample_sex">
-                <param name="sex" value="yes" />
-            </conditional>
             <param name="input_cnr_file" ftype="tabular" value="tumor.cnr" />
-            <param name="segment" ftype="tabular" value="sample.cns" />
-            <param name="threshold" value="10" />
-            <param name="male_reference" value="1" />
+            <section name="advanced_settings">
+                <conditional name="Sample_sex">
+                    <param name="sex" value="yes" />
+                </conditional>
+                <param name="segment" ftype="tabular" value="sample.cns" />
+                <param name="threshold" value="10" />
+                <param name="male_reference" value="1" />
+            </section>
             <output name="out_diagram_file" file="sample-diagram.pdf" ftype="pdf" compare="sim_size" > 
                 <assert_contents><has_size value="6000" delta="2000" /></assert_contents>
             </output>
--- a/macros.xml	Mon Apr 22 17:46:10 2024 +0000
+++ b/macros.xml	Fri Dec 13 23:56:18 2024 +0000
@@ -1,5 +1,5 @@
 <macros>
-    <token name="@VERSION_SUFFIX@">0</token>
+    <token name="@VERSION_SUFFIX@">1</token>
     <token name="@TOOL_VERSION@">0.9.11</token>
     <xml name="requirements">
         <requirements>