Mercurial > repos > iuc > cnvkit_segmetrics

comparison test-data/reference.cnn.2 @ 0:d9cb65e1f756 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
author iuc
date Fri, 29 Sep 2023 15:39:32 +0000
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comparison
equal deleted inserted replaced
-1:000000000000 0:d9cb65e1f756
1 chromosome start end gene log2 depth spread
2 chrM 576 848 - 3.09865 493.485 4.59406
3 chrM 848 1121 - 0.49908 22.4469 0.739936
4 chrM 1121 1394 - -0.516145 4.59341 0.765237
5 chrM 1394 1667 - 0.24243 11.022 0.359427
6 chrM 1667 1940 - -0.16725 7.45055 0.247965
7 chrM 1940 2212 - -1.38174 1.36029 2.04857
8 chrM 2212 2485 - 0.08762 10.6081 0.129905
9 chrM 2485 2758 - 0.65974 31.7436 0.978131
10 chrM 2758 3031 - -0.403685 5.35531 0.598503
11 chrM 3031 3304 - 0.131495 7.55678 0.194954
12 chrM 3306 3579 - 0.401125 10.9817 0.594708
13 chrM 3579 3853 - 0.25737 12.719 0.381577
14 chrM 3853 4126 - 0 7.17949 0
15 chrM 4126 4400 - -1.09463 1.65693 1.62289
16 chrM 4401 4695 - -0.271425 5.18707 0.402415
17 chrM 4695 4990 - 0.32592 17.7458 0.483209
18 chrM 4990 5284 - -0.46781 5.94218 0.693575
19 chrM 5284 5579 - 0.575175 20.8136 0.852754
20 chrM 5586 5655 - 0 9.37681 0
21 chrM 5656 5729 - -0.24822 4.76712 0.368011
22 chrM 5760 5891 - 0.327905 10.5954 0.486152
23 chrM 5903 6171 - 0.19112 13.8097 0.283355
24 chrM 6171 6440 - 0.45739 13.5353 0.678126
25 chrM 6440 6708 - 0 11.3657 0
26 chrM 6708 6977 - -0.121345 7.80669 0.179906
27 chrM 6977 7245 - 0.215935 15.3321 0.320145
28 chrM 7245 7514 - -0.846735 2.52045 1.25537
29 chrM 7517 7767 - -0.100975 8.152 0.149706
30 chrM 7767 8018 - 0.710745 19.2311 1.05375
31 chrM 8018 8269 - -0.327905 6.7251 0.486152
32 chrM 8294 8364 - -11.6145 0 17.2197
33 chrM 8365 8630 - -0.559835 2.89811 0.830011
34 chrM 8630 8896 - 0 7.87594 0
35 chrM 8896 9162 - 0.126545 13.5451 0.187616
36 chrM 9162 9427 - 0 9.68302 0
37 chrM 9427 9693 - -0.59913 3.43233 0.88827
38 chrM 9693 9959 - -0.204945 5.87594 0.303851
39 chrM 9959 10224 - -0.69093 3.59623 1.02437
40 chrM 10224 10490 - -0.69078 2.99624 1.02415
41 chrM 10490 10756 - -0.163025 7.1015 0.241701
42 chrM 10756 11022 - -0.601845 4.00376 0.892295
43 chrM 11022 11287 - 0.07448 11.2377 0.110424
44 chrM 11287 11553 - 0.07811 10.2932 0.115806
45 chrM 11553 11819 - 0.12266 11.109 0.181856
46 chrM 11819 12084 - 0.25082 11.1509 0.371866
47 chrM 12084 12350 - 0 10.1353 0
48 chrM 12350 12616 - 0 9.23684 0
49 chrM 12616 12882 - 0.13357 9.39474 0.198031
50 chrM 12882 13147 - 0.41539 15.834 0.615857
51 chrM 13147 13413 - -0.171695 8.90226 0.254555
52 chrM 13413 13679 - 0.16774 12.218 0.248691
53 chrM 13679 13944 - -0.61691 4.30943 0.914631
54 chrM 13944 14210 - -0.096015 8.87218 0.142352
55 chrM 14210 14476 - -0.146255 9.2218 0.216838
56 chrM 14476 14742 - 0.926785 33.8872 1.37405
57 chrM 14746 14987 - 0.792645 28.1369 1.17518
58 chrM 14987 15228 - 0.179775 14.2531 0.266534
59 chrM 15228 15470 - 0 9.3719 0
60 chrM 15470 15711 - 0 11.2946 0
61 chrM 15711 15953 - -0.131495 6.29752 0.194954
62 chrM 15955 16023 - -0.10308 4.13235 0.152826