Mercurial > repos > iuc > colibread_discosnp_rad
changeset 5:74ed1718ef58 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/colibread commit 747394d19e88a569a5154615e366ea0401c820dd
| author | iuc |
|---|---|
| date | Sat, 05 Oct 2024 19:55:43 +0000 |
| parents | 923df36f6592 |
| children | |
| files | discosnp_RAD.xml macros.xml |
| diffstat | 2 files changed, 6 insertions(+), 7 deletions(-) [+] |
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--- a/discosnp_RAD.xml Thu May 06 12:43:46 2021 +0000 +++ b/discosnp_RAD.xml Sat Oct 05 19:55:43 2024 +0000 @@ -1,6 +1,7 @@ -<tool id="discosnp_rad" name="DiscoSnpRAD" version="@DISCOSNP_VERSION@+galaxy0" profile="@PROFILE@"> +<tool id="discosnp_rad" name="DiscoSnpRAD" version="@TOOL_VERSION@+galaxy1" profile="@PROFILE@"> <description>discovering polymorphism from raw unassembled RADSeq NGS reads.</description> <macros> + <token name="@TOOL_VERSION@">2.5.4</token> <import>macros.xml</import> </macros> <expand macro="discosnp_requirements" /> @@ -43,8 +44,8 @@ <expand macro="discosnp_options" /> </inputs> <outputs> - <data name="vcf" from_work_dir="discoRad_*_clustered.vcf" format="vcf" label="VCF with ${tool.name} on $on_string"/> - <data name="fasta" from_work_dir="discoRad_*_raw.fa" format="fasta" label="Fasta with ${tool.name} on $on_string"/> + <data name="vcf" from_work_dir="discoRad_*_clustered.vcf" format="vcf" label="${tool.name} on ${on_string}: VCF"/> + <data name="fasta" from_work_dir="discoRad_*_raw.fa" format="fasta" label="${tool.name} on ${on_string}: FASTA"/> </outputs> <tests> <test> @@ -55,7 +56,6 @@ <param name="D" value="0"/> <param name="P" value="4"/> <param name="k" value="31"/> - <param name="b" value="2"/> <param name="max_size_cluster" value="50"/> <param name="max_missing" value="0.95"/> <param name="min_rank" value="0.0"/>
--- a/macros.xml Thu May 06 12:43:46 2021 +0000 +++ b/macros.xml Sat Oct 05 19:55:43 2024 +0000 @@ -1,11 +1,10 @@ <macros> - <token name="@DISCOSNP_VERSION@">2.5.4</token> - <token name="@PROFILE@">20.01</token> + <token name="@PROFILE@">23.1</token> <xml name="discosnp_requirements"> <requirements> - <requirement type="package" version="@DISCOSNP_VERSION@">discosnp</requirement> + <requirement type="package" version="@TOOL_VERSION@">discosnp</requirement> </requirements> </xml>