Mercurial > repos > iuc > concoct
comparison concoct.xml @ 7:eae7ee167917 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/concoct commit 86e1afebec29c10ef1e31196b23c24fde2d086da
| author | iuc |
|---|---|
| date | Sun, 12 Nov 2023 14:30:52 +0000 |
| parents | 16672a3c9b65 |
| children |
comparison
equal
deleted
inserted
replaced
| 6:16672a3c9b65 | 7:eae7ee167917 |
|---|---|
| 1 <tool id="concoct" name="CONCOCT" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@"> | 1 <tool id="concoct" name="CONCOCT" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@"> |
| 2 <description>for metagenome binning</description> | 2 <description>for metagenome binning</description> |
| 3 <macros> | 3 <macros> |
| 4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
| 5 </macros> | 5 </macros> |
| 6 <expand macro="biotools"/> | |
| 6 <expand macro="requirements"/> | 7 <expand macro="requirements"/> |
| 7 <command detect_errors="exit_code"><![CDATA[ | 8 <command detect_errors="exit_code"><![CDATA[ |
| 8 ## CONCOCT doesn't handle gzipped files. | 9 ## CONCOCT doesn't handle gzipped files. |
| 9 #if $composition_file.ext.endswith(".gz") | 10 #if $composition_file.ext.endswith(".gz") |
| 10 gunzip -c '$composition_file' > 'composition_file.fa' && | 11 gunzip -c '$composition_file' > 'composition_file.fa' && |