# HG changeset patch
# User iuc
# Date 1774623243 0
# Node ID 8d45cac1ee3261b6d7fdd54de828e4c085cd7d94
# Parent  30f8f85e3f98060345053b57e0ac961470867b36
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/coverage_report commit 643495866fcfdffccaaf729e0c12aec6f139ee9f

diff -r 30f8f85e3f98 -r 8d45cac1ee32 CoverageReport.pl
--- a/CoverageReport.pl	Wed Oct 25 12:37:35 2017 -0400
+++ b/CoverageReport.pl	Fri Mar 27 14:54:03 2026 +0000
@@ -162,6 +162,7 @@
 print OUT '\usepackage{fancyhdr}'."\n";
 print OUT '\usepackage{fontspec}' . "\n";
 print OUT '\usepackage{color}'."\n";
+print OUT '\usepackage{graphicx}'."\n";
 print OUT '\definecolor{grey}{RGB}{160,160,160}'."\n";
 print OUT '\definecolor{darkgrey}{RGB}{100,100,100}'."\n";
 print OUT '\definecolor{red}{RGB}{255,0,0}'."\n";
diff -r 30f8f85e3f98 -r 8d45cac1ee32 CoverageReport.xml
--- a/CoverageReport.xml	Wed Oct 25 12:37:35 2017 -0400
+++ b/CoverageReport.xml	Fri Mar 27 14:54:03 2026 +0000
@@ -1,11 +1,13 @@
-<tool id="CoverageReport2" name="Panel Coverage Report" version="0.0.4">
+<tool id="CoverageReport2" name="Panel Coverage Report" version="0.0.5+galaxy0" profile="25.0">
     <description>Provide mapping statistics</description>
     <requirements>
-      <requirement type="package" version="1.75">perl-number-format</requirement>    
-      <requirement type="package" version="3.4.1">R</requirement>
+      <requirement type="package" version="1.76">perl-number-format</requirement>    
+      <requirement type="package" version="4.2.2">r-base</requirement>
       <requirement type="package" version="2.17.0">bedtools</requirement>
       <requirement type="package" version="0.1.18">samtools</requirement>
-      <requirement type="package" version="0.1.6">tectonic</requirement>      
+      <requirement type="package" version="0.12.0">tectonic</requirement>
+      <requirement type="package" version="7.87.0">libcurl</requirement>
+      <requirement type="package" version="1.1.1w">openssl</requirement>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[      
     perl '$__tool_directory__/CoverageReport.pl'
diff -r 30f8f85e3f98 -r 8d45cac1ee32 README
--- a/README	Wed Oct 25 12:37:35 2017 -0400
+++ b/README	Fri Mar 27 14:54:03 2026 +0000
@@ -11,4 +11,5 @@
 0.0.1 - Initial release, no dependency handling
 0.0.2 - Updated release, following toolshed recommendations.
 0.0.4 - Changing over to bioconda for samtools,bedtools,tectonic and perl modules.
+0.0.5 - Updating dependency versions to allow for tool installation again as older dependencies may no longer exist