view test-data/aToB.over.chain @ 0:bc72094f7ce9 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit d578fad97ce545d68dde40155d36426a121e4447

chain 21270171362 chr1 249250621 + 10000 249233096 chr1 247249719 + 0 247199719 2
619	137	0
166661	50000	50000
40302	50000	50000
153649	50000	50000
1098479	1	1
47	1	1
73	117	114
773	1	1
43	1	1
864369	2	2
51	3	0
104	13694	13694
104	0	3
51	2	2
134936	50000	50000
1161048	150000	60000
1440092	27273	50000
7590365	50000	50000
116914	100000	50000
237250	50000	50000
3518496	50000	50000
12702424	150000	50000
16145012	0	1
7772	1	0
4705841	0	1
52977198	50000	50000
157344	21065	50000
16604841	50000	50000
189539	150000	50000
398739	21050000	20290000
195588	50000	50000
186739	150000	50000
175055	50000	50000
201709	100000	50000
126477	130183	50000
381	0	3
315	0	2
62	1	1
45	1	0
19	0	1
8	1	1
1158	1	0
314	12	13
2849	3	0
5615	1	1
37	1	1
3172	6	4
190	1	1
34	1	1
380	0	1
2099	3	0
765	2	2
366	0	4
1186	1	0
460	0	1
1242	28	28
574	1	1
21	1	1
1460	1	1
105	1	1
701	3	0
239	0	1
970	11	11
2365	1	1
21	1	1
384	8	8
996	2	0
10383	2	0
713	0	1
5188	1	1
30	1	1
1233	1	0
132	1	1
44	1	1
1123	22	22
1810	1	0
512	1	1
39	1	1
1096	0	16
743	1	0
9028	0	1
2506	0	6
8446	2	0
5505	0	3
7541	1	0
109864	50000	50000
78698	50000	50000
127263	50000	50000
170669	50000	50000
38311	100000	100000
1022394	50000	50000
281532	289973	50000
1648	1539	0
76	3225	3
1018	34	34
1716	2	0
159	4	0
1600	0	6
1385	1	0
2066	1	1
32	1	3
1556908	150000	50000
185320	150000	50000
172789	50000	50000
220313	50000	50000
455185	50000	50000
22047237	1	0
34365824	150000	50000
259514	150000	50000
17265625	50000	50000
11394365	50000	50000
13665999	150000	50000
174886

chain 22466185064 chr2 243199373 + 10000 243102476 chr2 242951149 + 0 242751149 1
1201236	0	1
2057	1	1
26	1	1
4043	22	0
82	7	101
33	84	0
26	1	23
67	48	0
176	318	0
40	92	0
33	0	74
62	0	6
22	0	118
387	2446	0
843	2450	0
167	2304	0
21342	1	1
50	4	0
2040	0	4
9053	2	0
88	3	53
1078	0	1
4122	1	0
1608	28	1
4029	0	9
967	4547	1000
420	27	0
2237126	0	1
2458	17	17
4595	4	0
3531	14	14
3954	51129	50000
1426129	160449	100025
11087286	0	3
773	103977	50000
1576	0	1
240	0	1
318	2	0
255	0	16
2851	10	10
1404	1	1
27	1	1
703	13	0
375	0	1
4783388	35000	25000
848	0	2
1225	0	2
391	1	0
3653	1	1
28	1	1
49	0	4
4514	0	9
9628	1	9
1483	7	7
1990	0	1
1949	1	0
2716230	1	0
7799848	851	851
38932068	5	9
9477928	0	3
7529698	72396	0
1891551	294073	150000
17672	1	0
5792	1	0
9017	0	266
2944	0	1
9388	2	0
37828	4	0
23436	0	4
290931	1273578	1000000
731068	3000000	3000000
2558421	0	1
1197	10	0
685	42	46
2309	0	1
1332	22	23
344	0	1
1645	4	4
4093	25	25
2446	1	0
6329	1	0
769	0	1
873	7	0
1299	0	1
8250	15	15
4291	10626	12548
1063	103	0
75	0	218
5897	1	1
33	1	1
9905	51	37
1711	1	1
45	1	1
1597	4	4
61	1	1
869	13	0
1633	15	15
1179	3	0
2819	0	2
156	88	465
100	0	25
4753	0	8
4903	6	6
3847	0	2
108126	0	145
3542	1	0
10276	0	1
402	1	1
47	1	1
63	2	0
583	1	1
34	1	1
8974	0	46
379	1	1
70	1	1
2474	0	102
1756	0	1
8426	0	1
11986570	151150	142000
14207	1	1
49	1	1
1781	0	12
409	1	0
1874	1	1
33	1	1
4795	2	0
3686	1	1
15	1	1
164	2	0
7287	5	5
702023	72796	150000
69	1	0
1598	0	1
1340	0	1
1030	0	4
1166	10	10
6406	1	1
34	1	1
3283	2	4
496	1	23
25	10	0
40	1	1
21282	2	1
1406	0	44
937	17	0
18255	1	0
172366	0	281526
40517	0	406
58864	1	2
1843	0	2
14994	0	1
12992	2	0
2571146	1	0
35688061	108224	100000
29671719	1	0
39665349	1	0
14876089	64197	20000
401	0	3
1831	1	1
61	1	1
654	11	1
127	0	28
116	25	29
74	9	9
3247	2	0
1355	1	0
816	1	0
21	3	0
526	1	1
60	1	1
773	1	0
1494	1	0
1683	1	0
21	1	1
596	1	0
1582	1	0
425	0	3
1139	0	8
138	144	813
71	1	0
385638	1	1
219	1	1
51	7	7
54	15205	15205
54	7	7
51	1	1
110	1	1
5198249	0	1
115	80	0
60	40	0
80	100	20
442	1	1
35	1	1
119	9	129
14	0	40
61	1	1
85	0	40
1331	0	1
1194	12	14
1773	0	5
1623	1	1
25	1	1
2422	21	22
2315	0	1
31	1	1
1508	0	3
50	0	4
970	6	6
7234	4	0
1228	1	0
1233	8	1
4207	1	1
41	1	1
1715	50	50
1532	0	2
1714	2	0
2299	2	0
2143	1	1
18	1	1
917	1	0
1082	1	1
49	1	1
9098	0	4
5529	0	1
3266	0	8
894	6	0
1440	1	1
2095	2	0
4179	18	13
1785	0	1
1674	0	6
1217	32348	33000
287	17	23
40	173	0
20	161	0
13	66	0
12	71	1
12548	30000	30000
952154	41011	25000
1914	1	0
225	1	1
57	1	1
2910	0	1
471	1	0
1956	1	1
43	1	1
991	0	92
2863	3	0
1838	306	0
1006	30	0
206	1	1
27	0	3
221	17	17
1525	8	0
413	1	1
32	2	2
1573	12	12
2258676

chain 18404394637 chr3 198022430 + 60000 197962430 chr3 199501827 + 35000 199446827 3
13552792	0	1
585083	0	1
2092	1	2
71	0	1
31067262	0	1
90	1	0
5628461	0	15
788	1	0
3676	0	2
35	1	1
4682	1	0
1295	0	5
437	53	42
326	0	2
3309	1	1
40	1	1
998	0	3
3584	5	0
930	5	7
845	1	1
28	2	1
303	0	1
507	0	5
5088	1	0
2185	10046	10048
949	4	4
35	1	1
2874	0	1
6717	0	1
2823	1	0
703	0	4
5143	1	0
2490	10	10
162	7	7
6308	0	15
15177535	152352	260003
2532	1	0
1633	2	2
24207544	3000000	4400000
60453436	0	4
40076813	20999	20000
8195	1	1
44	1	1
1408	1	1
33	1	1
172	3	4
25	1	1
538	13	13
173	1	1
27	1	1
636	1	1
28	1	1
470	3	3
112	1	1
375	1	1
26	26	0
115	78	0
52	23	0
104	26	0
15	231	0
56	1	1
20	1	1
815	16	16
484	1	1
49	18	0
509	4	3
23	1	1
391	1	1
44	1	1
1278	0	4
32	1	1
263	4	0
27	1	1
2416	0	2
3184	43	43
1150	13	13
736	1	1
47	1	1
1416	1	1
20	1	1
1020	1	1
25	1	1
482	5	0
716	1	0
1697	1	1
29	1	1
1270261	23108	27000
40930	1	0
17455	1	1
28	4	4
43	0	491
1679	1	1
33	7	5
29	1	3
54863	53	16
7653	2	2
29	2	2
15	0	30
180	0	75
215	45	0
360	915	0
6188	96	0
17	288	0
1388	1	1
37	1	1
7956	0	1
374	0	1
2442058

chain 310844 chr4 191154276 + 9241835 9252105 chr4 191273063 + 8941714 8947231 850
2726	14	14
243	9	9
78	4	4
157	213	211
265	85	85
524	4751	0
379	283	283
539

chain 9105 chr4 191154276 + 8982741 8983189 chr10 135374737 - 120304868 120305301 22041837
59	380	365
9