Mercurial > repos > iuc > crossmap_region
comparison macros.xml @ 2:a50ef4d58c90 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit ad4d739b4837dd61abc85614568d22f271f14568
author | iuc |
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date | Mon, 02 Sep 2024 12:01:39 +0000 (3 months ago) |
parents | eb66d7a04bf8 |
children |
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1:eb66d7a04bf8 | 2:a50ef4d58c90 |
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1 <?xml version="1.0"?> | |
2 <macros> | 1 <macros> |
3 <xml name="requirements"> | 2 <xml name="requirements"> |
4 <requirements> | 3 <requirements> |
5 <requirement type="package" version="@TOOL_VERSION@">crossmap</requirement> | 4 <requirement type="package" version="@TOOL_VERSION@">crossmap</requirement> |
6 <yield/> | 5 <yield/> |
7 </requirements> | 6 </requirements> |
8 </xml> | 7 </xml> |
9 <token name="@TOOL_VERSION@">0.6.1</token> | 8 <token name="@TOOL_VERSION@">0.7.0</token> |
10 <token name="@VERSION_SUFFIX@">0</token> | 9 <token name="@VERSION_SUFFIX@">0</token> |
11 <xml name="stdio"> | 10 <xml name="stdio"> |
12 <stdio> | 11 <stdio> |
13 <regex match="Aborted (core dumped)" source="stdout" level="fatal"/> | 12 <regex match="Aborted (core dumped)" source="stdout" level="fatal"/> |
14 <regex match=".*" source="both" level="log"/> | 13 <regex match=".*" source="both" level="log"/> |
15 <exit_code range="1:"/> | 14 <exit_code range="1:"/> |
16 </stdio> | 15 </stdio> |
17 </xml> | 16 </xml> |
18 <xml name="version_command"> | 17 <xml name="version_command"> |
19 <version_command><![CDATA[ | 18 <version_command><![CDATA[ |
20 CrossMap.py 2>&1 | head -n 1 | grep -E --only-matching 'CrossMap.*' | 19 CrossMap 2>&1 | head -n 1 | grep -E --only-matching 'CrossMap.*' |
21 ]]></version_command> | 20 ]]></version_command> |
22 </xml> | 21 </xml> |
23 <xml name="chain"> | 22 <xml name="chain"> |
24 <conditional name="chain_source"> | 23 <conditional name="chain_source"> |
25 <param name="index_source" type="select" label="Source for LiftOver Data (chain file)"> | 24 <param name="index_source" type="select" label="Source for LiftOver Data (chain file)"> |