annotate test-data/aToB.over.chain @ 0:0e6f675cea09 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit d578fad97ce545d68dde40155d36426a121e4447

chain 21270171362 chr1 249250621 + 10000 249233096 chr1 247249719 + 0 247199719 2
619	137	0
166661	50000	50000
40302	50000	50000
153649	50000	50000
1098479	1	1
47	1	1
73	117	114
773	1	1
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51	3	0
104	13694	13694
104	0	3
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7590365	50000	50000
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237250	50000	50000
3518496	50000	50000
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16145012	0	1
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201709	100000	50000
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381	0	3
315	0	2
62	1	1
45	1	0
19	0	1
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314	12	13
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190	1	1
34	1	1
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765	2	2
366	0	4
1186	1	0
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574	1	1
21	1	1
1460	1	1
105	1	1
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239	0	1
970	11	11
2365	1	1
21	1	1
384	8	8
996	2	0
10383	2	0
713	0	1
5188	1	1
30	1	1
1233	1	0
132	1	1
44	1	1
1123	22	22
1810	1	0
512	1	1
39	1	1
1096	0	16
743	1	0
9028	0	1
2506	0	6
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7541	1	0
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127263	50000	50000
170669	50000	50000
38311	100000	100000
1022394	50000	50000
281532	289973	50000
1648	1539	0
76	3225	3
1018	34	34
1716	2	0
159	4	0
1600	0	6
1385	1	0
2066	1	1
32	1	3
1556908	150000	50000
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455185	50000	50000
22047237	1	0
34365824	150000	50000
259514	150000	50000
17265625	50000	50000
11394365	50000	50000
13665999	150000	50000
174886

chain 22466185064 chr2 243199373 + 10000 243102476 chr2 242951149 + 0 242751149 1
1201236	0	1
2057	1	1
26	1	1
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82	7	101
33	84	0
26	1	23
67	48	0
176	318	0
40	92	0
33	0	74
62	0	6
22	0	118
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167	2304	0
21342	1	1
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967	4547	1000
420	27	0
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3531	14	14
3954	51129	50000
1426129	160449	100025
11087286	0	3
773	103977	50000
1576	0	1
240	0	1
318	2	0
255	0	16
2851	10	10
1404	1	1
27	1	1
703	13	0
375	0	1
4783388	35000	25000
848	0	2
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391	1	0
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28	1	1
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4514	0	9
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937	17	0
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58864	1	2
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138	144	813
71	1	0
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219	1	1
51	7	7
54	15205	15205
54	7	7
51	1	1
110	1	1
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115	80	0
60	40	0
80	100	20
442	1	1
35	1	1
119	9	129
14	0	40
61	1	1
85	0	40
1331	0	1
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1228	1	0
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41	1	1
1715	50	50
1532	0	2
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2299	2	0
2143	1	1
18	1	1
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49	1	1
9098	0	4
5529	0	1
3266	0	8
894	6	0
1440	1	1
2095	2	0
4179	18	13
1785	0	1
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1217	32348	33000
287	17	23
40	173	0
20	161	0
13	66	0
12	71	1
12548	30000	30000
952154	41011	25000
1914	1	0
225	1	1
57	1	1
2910	0	1
471	1	0
1956	1	1
43	1	1
991	0	92
2863	3	0
1838	306	0
1006	30	0
206	1	1
27	0	3
221	17	17
1525	8	0
413	1	1
32	2	2
1573	12	12
2258676

chain 18404394637 chr3 198022430 + 60000 197962430 chr3 199501827 + 35000 199446827 3
13552792	0	1
585083	0	1
2092	1	2
71	0	1
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35	1	1
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437	53	42
326	0	2
3309	1	1
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930	5	7
845	1	1
28	2	1
303	0	1
507	0	5
5088	1	0
2185	10046	10048
949	4	4
35	1	1
2874	0	1
6717	0	1
2823	1	0
703	0	4
5143	1	0
2490	10	10
162	7	7
6308	0	15
15177535	152352	260003
2532	1	0
1633	2	2
24207544	3000000	4400000
60453436	0	4
40076813	20999	20000
8195	1	1
44	1	1
1408	1	1
33	1	1
172	3	4
25	1	1
538	13	13
173	1	1
27	1	1
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28	1	1
470	3	3
112	1	1
375	1	1
26	26	0
115	78	0
52	23	0
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15	231	0
56	1	1
20	1	1
815	16	16
484	1	1
49	18	0
509	4	3
23	1	1
391	1	1
44	1	1
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32	1	1
263	4	0
27	1	1
2416	0	2
3184	43	43
1150	13	13
736	1	1
47	1	1
1416	1	1
20	1	1
1020	1	1
25	1	1
482	5	0
716	1	0
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1270261	23108	27000
40930	1	0
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28	4	4
43	0	491
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29	1	3
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29	2	2
15	0	30
180	0	75
215	45	0
360	915	0
6188	96	0
17	288	0
1388	1	1
37	1	1
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374	0	1
2442058

chain 310844 chr4 191154276 + 9241835 9252105 chr4 191273063 + 8941714 8947231 850
2726	14	14
243	9	9
78	4	4
157	213	211
265	85	85
524	4751	0
379	283	283
539

chain 9105 chr4 191154276 + 8982741 8983189 chr10 135374737 - 120304868 120305301 22041837
59	380	365
9