# HG changeset patch
# User iuc
# Date 1575586857 18000
# Node ID 4d89978c6188572dcd6d63ae7ffc1076cdc1f49b
# Parent 18517edb473388322cd0ff66a8c7635a355e4bfe
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dada2 commit a82e4981dac025c909244acd7127c215bdb519a7"
diff -r 18517edb4733 -r 4d89978c6188 README.md
--- a/README.md Fri Nov 08 18:50:24 2019 -0500
+++ b/README.md Thu Dec 05 18:00:57 2019 -0500
@@ -1,15 +1,21 @@
Wrappers for the core functionality of the dada2 package https://benjjneb.github.io/dada2/index.html.
+- assignTaxonomyAddspecies
- filterAndTrim
- learnErrors
- dada
- mergePairs
- makeSequenceTable
+- plotComplexity
+- plotQualityProfile
- removeBimeraDenovo
+- seqCounts
Installation
============
+A conda release >=4.6 is needed so that the bioconductor-dada2 conda environment can be installed correctly.
+
The dada2 wrappers can be installed via the toolshed. Since they use datatypes that have been introduced with Galaxy release 19.09 they won't work out of the box for older Galaxy releases.
In order to run the tools you may either upgrade Galaxy or execute the following two steps:
diff -r 18517edb4733 -r 4d89978c6188 macros.xml
--- a/macros.xml Fri Nov 08 18:50:24 2019 -0500
+++ b/macros.xml Thu Dec 05 18:00:57 2019 -0500
@@ -8,7 +8,7 @@
1.12
- 0
+ 1