Mercurial > repos > iuc > dada2_filterandtrim

diff test-data/gentest.sh @ 0:cc41546adf56 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dada2 commit f8b6b6e72914ad6bcca8423dfa03f59bde80992e"
author iuc
date Fri, 08 Nov 2019 18:48:06 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/gentest.sh	Fri Nov 08 18:48:06 2019 -0500
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+conda create -y --quiet --override-channels --channel conda-forge --channel bioconda --channel defaults --name __bioconductor-dada2@1.12 bioconductor-dada2=1.12
+conda activate bioconductor-dada2@1.12
+
+Rscript gentest.R
+
+# remove files only needed for test generation
+rm learnErrors_F3D0_R2.pdf dada_F3D0_R2.Rdata