# HG changeset patch # User iuc # Date 1575586937 18000 # Node ID 498d57610fcd72981deced87adb6c1a2a2af3d51 # Parent ab2030f217a92c769fbd146b2711542309bcace6 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dada2 commit a82e4981dac025c909244acd7127c215bdb519a7" diff -r ab2030f217a9 -r 498d57610fcd README.md --- a/README.md Fri Nov 08 18:51:48 2019 -0500 +++ b/README.md Thu Dec 05 18:02:17 2019 -0500 @@ -1,15 +1,21 @@ Wrappers for the core functionality of the dada2 package https://benjjneb.github.io/dada2/index.html. +- assignTaxonomyAddspecies - filterAndTrim - learnErrors - dada - mergePairs - makeSequenceTable +- plotComplexity +- plotQualityProfile - removeBimeraDenovo +- seqCounts Installation ============ +A conda release >=4.6 is needed so that the bioconductor-dada2 conda environment can be installed correctly. + The dada2 wrappers can be installed via the toolshed. Since they use datatypes that have been introduced with Galaxy release 19.09 they won't work out of the box for older Galaxy releases. In order to run the tools you may either upgrade Galaxy or execute the following two steps: diff -r ab2030f217a9 -r 498d57610fcd macros.xml --- a/macros.xml Fri Nov 08 18:51:48 2019 -0500 +++ b/macros.xml Thu Dec 05 18:02:17 2019 -0500 @@ -8,7 +8,7 @@ 1.12 - 0 + 1