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dada2_plotqualityprofile
directory /test-data/ @ 1:
fa11922f3d91
draft
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F3D0_S188_L001_R1_001.fastq.gz
26099
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F3D0_S188_L001_R2_001.fastq.gz
35187
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assignTaxonomyAddspecies_F3D0.tab
1911
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assignTaxonomyAddspecies_F3D0_boot.tab
1952
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complexity.pdf
5179
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dada2_species.loc
444
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dada2_taxonomy.loc
470
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dada_F3D0_R1.Rdata
22149
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dada_F3D0_R2.Rdata
20010
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filterAndTrim_F3D0.tab
47
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filterAndTrim_F3D0_R1.fq.gz
26064
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filterAndTrim_F3D0_R2.fq.gz
35036
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filterAndTrim_single_F3D0_R1.fq.gz
12109
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filterAndTrim_single_filters_F3D0_R1.fq.gz
4430
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filterAndTrim_single_trimmers_F3D0_R1.fq.gz
4493
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gentest.R
3698
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gentest.sh
314
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learnErrors_F3D0_R1.Rdata
13752
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learnErrors_F3D0_R1.pdf
14015
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learnErrors_F3D0_R2.Rdata
13752
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learnErrors_F3D0_R2.pdf
14015
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makeSequenceTable_F3D0.pdf
4577
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makeSequenceTable_F3D0.tab
1797
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mergePairs_F3D0.Rdata
735
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mergePairs_F3D0_nondefault.Rdata
1399
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qualityProfile.pdf
24836
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reference.fa
220
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reference_species.fa
238
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removeBimeraDenovo_F3D0.tab
1797
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removeBimeraDenovo_F3D0_dada_uniques.tab
4579
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removeBimeraDenovo_F3D0_derep_uniques.tab
584868
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removeBimeraDenovo_F3D0_mergepairs.Rdata
735
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seqCounts_F3D0_dadaF.tab
37
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seqCounts_F3D0_filter.tab
72
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seqCounts_F3D0_merge.tab
39
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seqCounts_F3D0_nochim.tab
21
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seqCounts_F3D0_seqtab.tab
21
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