Mercurial > repos > iuc > dada2_primercheck

annotate test-data/dada2_taxonomy.loc @ 1:ee763baa80c3 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dada2 commit bbbc0e71b1db299a7c7296f25ac7adcccd27fbe3
author iuc
date Tue, 11 Feb 2025 23:26:47 +0000
parents 74ec28dbdf17
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
74ec28dbdf17 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dada2 commit 3dd3145db6ed58efc3bf5f71e96515173967fc72
iuc
parents:
diff changeset
1 # This is a sample file distributed with Galaxy that is used to define a
74ec28dbdf17 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dada2 commit 3dd3145db6ed58efc3bf5f71e96515173967fc72
iuc
parents:
diff changeset
2 # list of dada2 reference data sets for taxonomy assignment, using three
74ec28dbdf17 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dada2 commit 3dd3145db6ed58efc3bf5f71e96515173967fc72
iuc
parents:
diff changeset
3 # tab separated columns:
74ec28dbdf17 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dada2 commit 3dd3145db6ed58efc3bf5f71e96515173967fc72
iuc
parents:
diff changeset
4 #
74ec28dbdf17 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dada2 commit 3dd3145db6ed58efc3bf5f71e96515173967fc72
iuc
parents:
diff changeset
5 # <unique_build_id> <display_name> <fasta_file_path> <taxlevels>
74ec28dbdf17 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dada2 commit 3dd3145db6ed58efc3bf5f71e96515173967fc72
iuc
parents:
diff changeset
6 #
74ec28dbdf17 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dada2 commit 3dd3145db6ed58efc3bf5f71e96515173967fc72
iuc
parents:
diff changeset
7 # Datasets can be retrieved from https://benjjneb.github.io/dada2/training.html
74ec28dbdf17 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dada2 commit 3dd3145db6ed58efc3bf5f71e96515173967fc72
iuc
parents:
diff changeset
8 #
74ec28dbdf17 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dada2 commit 3dd3145db6ed58efc3bf5f71e96515173967fc72
iuc
parents:
diff changeset
9 # taxlevels is a comma separated list of taxonomy levels
74ec28dbdf17 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dada2 commit 3dd3145db6ed58efc3bf5f71e96515173967fc72
iuc
parents:
diff changeset
10 test_buildid test_displayname ${__HERE__}/reference.fa.gz Level1,Level2,Level3,Level4,Level5