Mercurial > repos > iuc > data_manager_bowtie_index_builder

diff data_manager/bowtie_index_builder.py @ 2:086edfff112b draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie_index_builder commit 356a04ca3fb988f20fb63ccf053ef9f62a3d002f
author iuc
date Sun, 18 Sep 2016 08:21:09 -0400
parents 35c1e3785c90
children ea5faedd0795
line wrap: on
line diff
--- a/data_manager/bowtie_index_builder.py	Sun Sep 18 07:22:06 2016 -0400
+++ b/data_manager/bowtie_index_builder.py	Sun Sep 18 08:21:09 2016 -0400
@@ -32,7 +32,7 @@
     os.symlink( fasta_filename, sym_linked_fasta_filename )
     args = [ 'bowtie-build' ]
     if color_space:
-        args.append( '-c' )
+        args.append( '-C' )
     args.append( sym_linked_fasta_filename)
     args.append( fasta_base_name )
     args.append( sym_linked_fasta_filename )