Mercurial > repos > iuc > data_manager_bowtie_index_builder
changeset 3:ea5faedd0795 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie_index_builder commit 8652f36a3a3838dca989426961561e81432acf4f
| author | iuc |
|---|---|
| date | Tue, 04 Apr 2017 18:06:27 -0400 |
| parents | 086edfff112b |
| children | 86e9af693a33 |
| files | data_manager/bowtie_index_builder.py tool_data_table_conf.xml.sample |
| diffstat | 2 files changed, 4 insertions(+), 3 deletions(-) [+] |
line wrap: on
line diff
--- a/data_manager/bowtie_index_builder.py Sun Sep 18 08:21:09 2016 -0400 +++ b/data_manager/bowtie_index_builder.py Tue Apr 04 18:06:27 2017 -0400 @@ -91,5 +91,6 @@ # save info to json file open( filename, 'wb' ).write( json.dumps( data_manager_dict ) ) + if __name__ == "__main__": main()
--- a/tool_data_table_conf.xml.sample Sun Sep 18 08:21:09 2016 -0400 +++ b/tool_data_table_conf.xml.sample Tue Apr 04 18:06:27 2017 -0400 @@ -1,16 +1,16 @@ <tables> <!-- Locations of all fasta files under genome directory --> - <table name="all_fasta" comment_char="#"> + <table name="all_fasta" comment_char="#" allow_duplicate_entries="False"> <columns>value, dbkey, name, path</columns> <file path="tool-data/all_fasta.loc" /> </table> <!-- Locations of indexes in the Bowtie mapper format --> - <table name="bowtie_indexes" comment_char="#"> + <table name="bowtie_indexes" comment_char="#" allow_duplicate_entries="False"> <columns>value, dbkey, name, path</columns> <file path="tool-data/bowtie_indices.loc" /> </table> <!-- Locations of indexes in the Bowtie color-space mapper format --> - <table name="bowtie_indexes_color" comment_char="#"> + <table name="bowtie_indexes_color" comment_char="#" allow_duplicate_entries="False"> <columns>value, dbkey, name, path</columns> <file path="tool-data/bowtie_indices_color.loc" /> </table>