Mercurial > repos > iuc > data_manager_build_kraken2_database
annotate data_manager_conf.xml @ 11:1e34d2e3d285 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit efa1fd42c2a5a618bd628ff435e5dde1c1ef3545
author | iuc |
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date | Mon, 15 Jul 2024 09:21:32 +0000 |
parents | ed1518ce2237 |
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e4cdf82de430
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
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1 <data_managers> |
7
ed1518ce2237
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 096286097ed5cdf189a1b68c3fc34d10f4142e54
iuc
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2 <data_manager tool_file="data_manager/kraken2_build_database.xml" id="kraken2_build_database"> |
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e4cdf82de430
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff
changeset
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3 <data_table name="kraken2_databases"> |
e4cdf82de430
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff
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4 <output> |
e4cdf82de430
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff
changeset
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5 <column name="value"/> |
e4cdf82de430
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff
changeset
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6 <column name="name"/> |
e4cdf82de430
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff
changeset
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7 <column name="path" output_ref="out_file"> |
e4cdf82de430
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff
changeset
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8 <move type="directory"> |
e4cdf82de430
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff
changeset
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9 <source>${path}</source> |
e4cdf82de430
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff
changeset
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10 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">kraken2_databases/${path}</target> |
e4cdf82de430
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff
changeset
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11 </move> |
e4cdf82de430
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff
changeset
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12 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/kraken2_databases/${path}</value_translation> |
e4cdf82de430
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff
changeset
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13 <value_translation type="function">abspath</value_translation> |
e4cdf82de430
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff
changeset
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14 </column> |
e4cdf82de430
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff
changeset
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15 </output> |
e4cdf82de430
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff
changeset
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16 </data_table> |
e4cdf82de430
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff
changeset
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17 </data_manager> |
e4cdf82de430
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff
changeset
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18 </data_managers> |