Mercurial > repos > iuc > data_manager_build_kraken2_database
changeset 15:201eff2131d6 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit f43fe4223c7cca2dac7549c3dee7e766378588da
| author | iuc |
|---|---|
| date | Sat, 25 Jan 2025 17:41:48 +0000 |
| parents | 8c533e19b697 |
| children | |
| files | data_manager/kraken2_build_database.xml |
| diffstat | 1 files changed, 18 insertions(+), 1 deletions(-) [+] |
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--- a/data_manager/kraken2_build_database.xml Fri Dec 13 21:18:31 2024 +0000 +++ b/data_manager/kraken2_build_database.xml Sat Jan 25 17:41:48 2025 +0000 @@ -2,7 +2,7 @@ <description>database builder</description> <macros> <token name="@TOOL_VERSION@">2.1.3</token> - <token name="@VERSION_SUFFIX@">5</token> + <token name="@VERSION_SUFFIX@">6</token> <token name="@PROFILE@">22.01</token> <xml name="common_params"> <param name="kmer_len" type="integer" value="35" label="K-mer length in BP" /> @@ -113,6 +113,7 @@ <when value="standard_prebuilt"> <conditional name="prebuild"> <param name="prebuilt_date" type="select" label="Select index build date"> + <option value="2024-12-28">December 28, 2024</option> <option value="2024-09-04">September 4, 2024</option> <option value="2024-06-05">June 5, 2024</option> <option value="2024-01-12">January 12, 2024</option> @@ -123,6 +124,22 @@ <option value="2020-12-02">December 2, 2020</option> <option value="2020-09-19">September 19, 2020</option> </param> + <when value="2024-12-28"> + <param name="prebuilt_db" type="select" label="Select a prebuilt Refseq index to download"> + <expand macro="viral"/> + <expand macro="minusb"/> + <expand macro="standard"/> + <expand macro="standard_08gb"/> + <expand macro="standard_16gb"/> + <expand macro="pluspf"/> + <expand macro="pluspf_08gb"/> + <expand macro="pluspf_16gb"/> + <expand macro="pluspfp"/> + <expand macro="pluspfp_08gb"/> + <expand macro="pluspfp_16gb"/> + <expand macro="core_nt"/> + </param> + </when> <when value="2024-09-04"> <param name="prebuilt_db" type="select" label="Select a prebuilt Refseq index to download"> <expand macro="viral"/>