Mercurial > repos > iuc > data_manager_clair3_models

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/data_managers/data_manager_clair3_models commit 2672414472cc968c736dc7d42f5a119ff8c16c62
author iuc
date Thu, 20 Feb 2025 17:57:11 +0000
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11e42265a9b0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/data_managers/data_manager_clair3_models commit 2672414472cc968c736dc7d42f5a119ff8c16c62
iuc
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1 # this is a table separated file describing the locations of Clair3 models (which are download from Oxford Nanopore's Rerio site and provided as directories)
11e42265a9b0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/data_managers/data_manager_clair3_models commit 2672414472cc968c736dc7d42f5a119ff8c16c62
iuc
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2 #
11e42265a9b0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/data_managers/data_manager_clair3_models commit 2672414472cc968c736dc7d42f5a119ff8c16c62
iuc
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3 # the columns are:
11e42265a9b0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/data_managers/data_manager_clair3_models commit 2672414472cc968c736dc7d42f5a119ff8c16c62
iuc
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4 # 1. value
11e42265a9b0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/data_managers/data_manager_clair3_models commit 2672414472cc968c736dc7d42f5a119ff8c16c62
iuc
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5 # 2. platform
11e42265a9b0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/data_managers/data_manager_clair3_models commit 2672414472cc968c736dc7d42f5a119ff8c16c62
iuc
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6 # 3. sha256sum (sha256 hash of the downloaded model, before unpacking)
11e42265a9b0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/data_managers/data_manager_clair3_models commit 2672414472cc968c736dc7d42f5a119ff8c16c62
iuc
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7 # 4. path (path to directory containing model)
11e42265a9b0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/data_managers/data_manager_clair3_models commit 2672414472cc968c736dc7d42f5a119ff8c16c62
iuc
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8 # 5. source (where the model came from. rerio means Oxford Nanopore's https://github.com/nanoporetech/rerio with its associated license)
11e42265a9b0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/data_managers/data_manager_clair3_models commit 2672414472cc968c736dc7d42f5a119ff8c16c62
iuc
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9 # for example
11e42265a9b0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/data_managers/data_manager_clair3_models commit 2672414472cc968c736dc7d42f5a119ff8c16c62
iuc
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10 #
11e42265a9b0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/data_managers/data_manager_clair3_models commit 2672414472cc968c736dc7d42f5a119ff8c16c62
iuc
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11 # r1041_e82_400bps_hac_v500 ont a1b998a80bc94ba4f5babc811d62e83a61bba3819188c488daee1c698bb72ae5 /data/galaxy/tool_data/clair3_models/r1041_e82_400bps_hac_v500 rerio