Mercurial > repos > iuc > data_manager_fetch_index_maf
diff data_manager_conf.xml @ 0:aed50ca398bb draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 9c8e61ce03ebd67c2c852f5db4a62d19200c77fe"
| author | iuc |
|---|---|
| date | Thu, 25 Jun 2020 14:02:25 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/data_manager_conf.xml Thu Jun 25 14:02:25 2020 -0400 @@ -0,0 +1,20 @@ +<?xml version="1.0"?> +<data_managers tool_path="tools"> + <data_manager tool_file="data_manager_fetch_index_maf/data_manager/data_manager_fetch_and_index_maf.xml" id="data_manager_fetch_and_index_maf"> + <data_table name="indexed_maf_files"> + <output> + <column name="name" /> + <column name="value" /> + <column name="indexed_for" /> + <column name="exists_in_maf" /> + <column name="path" output_ref="output" > + <move type="directory" relativize_symlinks="True"> + <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/align/${value}</target> + </move> + <value_translation>#echo ','.join([os.path.join($GALAXY_DATA_MANAGER_DATA_PATH, '%s' % dbkey, 'align', '%s' % $value, $filename) for filename in $path.split(',')])</value_translation> + <value_translation type="function">abspath</value_translation> + </column> + </output> + </data_table> + </data_manager> +</data_managers> \ No newline at end of file