Mercurial > repos > iuc > data_manager_gtdbtk_database_installer
comparison tool-data/gtdbtk_database.loc.sample @ 0:629464b96c2e draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit 69da0d34ea6e72c0427ec2d3e882c86cbb90833f
author | iuc |
---|---|
date | Thu, 08 Dec 2022 19:26:49 +0000 |
parents | |
children |
comparison
equal
deleted
inserted
replaced
-1:000000000000 | 0:629464b96c2e |
---|---|
1 # This is a sample file distributed with Galaxy that enables tools | |
2 # to use a directory of GTDB-Tk databases. The gtdbtk_databases.loc | |
3 # file has this format (longer white space characters are TAB characters): | |
4 # | |
5 # <unique_build_id> <display_name> <directory_path> | |
6 # | |
7 # So, for example, if you have the gtdbtk 202 stored in | |
8 # /depot/data2/galaxy/gtdbtk/202/, | |
9 # then the gtdbtk_databases.loc entry would look like this: | |
10 # | |
11 # release202 gtdbtk database release 202 /depot/data2/galaxy/gtdbtk/release202 | |
12 # | |
13 # and your /depot/data2/galaxy/gtdbtk/release202 directory | |
14 # would contain GTDB-Tk database files for release 202, sommething like this: | |
15 # | |
16 #drwxr-sr-x 3 gvk G-824019 4096 Apr 20 2021 fastani/ | |
17 #-rw-r--r-- 1 gvk G-824019 4810764 Apr 22 2021 manifest.tsv | |
18 #drwxr-sr-x 4 gvk G-824019 4096 Apr 21 2021 markers/ | |
19 #drwxr-sr-x 2 gvk G-824019 4096 Apr 20 2021 masks/ | |
20 #drwxr-sr-x 2 gvk G-824019 4096 Apr 20 2021 metadata/ | |
21 #drwxr-sr-x 2 gvk G-824019 4096 Apr 21 2021 mrca_red/ | |
22 #drwxr-sr-x 2 gvk G-824019 4096 Apr 20 2021 msa/ | |
23 #drwxr-sr-x 4 gvk G-824019 4096 Apr 21 2021 pplacer/ | |
24 #drwxr-sr-x 2 gvk G-824019 4096 Apr 20 2021 radii/ | |
25 #drwxr-sr-x 2 gvk G-824019 4096 Apr 20 2021 taxonomy/ |