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view data_manager_conf.xml @ 4:10232d2b5062 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit 0bb620025a61de6caa8a93537fec8ea65eda43be
author iuc
date Fri, 16 Aug 2024 08:44:14 +0000
parents 6ab422fba1a3
children
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<data_managers>
    <data_manager tool_file="data_manager/gtdbtk_database_installer.xml" id="gtdbtk_database_installer">
        <data_table name="gtdbtk_database_versioned">
            <output>
                <column name="value"/>
                <column name="name"/>
                <column name="version"/>
                <column name="path" output_ref="out_file">
                    <move type="directory" relativize_symlinks="True">
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">gtdbtk_database_versioned/${value}</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/gtdbtk_database_versioned/${value}</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
        <data_table name="gtdbtk_database_metadata_versioned">
            <output>
                <column name="value"/>
                <column name="name"/>
                <column name="version"/>
                <column name="path" output_ref="out_file">
                    <move type="directory" relativize_symlinks="True">
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">gtdbtk_database_metadata_versioned/${value}</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/gtdbtk_database_metadata_versioned/${value}</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
    </data_manager>
</data_managers>