Mercurial > repos > iuc > data_manager_hisat2_index_builder
view data_manager_conf.xml @ 7:d74c740bdb25 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_hisat2_index_builder commit 096286097ed5cdf189a1b68c3fc34d10f4142e54
author | iuc |
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date | Sun, 16 Apr 2023 08:30:13 +0000 |
parents | d3eb4d51b285 |
children |
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<?xml version="1.0"?> <data_managers> <data_manager tool_file="data_manager/hisat2_index_builder.xml" id="hisat2_index_builder"> <data_table name="hisat2_indexes"> <output> <column name="value" /> <column name="dbkey" /> <column name="name" /> <column name="path" output_ref="out_file" > <move type="directory" relativize_symlinks="True"> <!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base --> <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/hisat2_index/${value}</target> </move> <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/hisat2_index/${value}/${path}</value_translation> <value_translation type="function">abspath</value_translation> </column> </output> </data_table> </data_manager> </data_managers>