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view data_manager_conf.xml @ 1:d9c177013aba draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_homer_preparse commit 16a919905f336e34e237388c1921d0f4f8a368af
author iuc
date Thu, 06 Apr 2023 16:20:54 +0000
parents e6a2110ac3b9
children 679673fbf0b4
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<?xml version="1.0"?>
<data_managers>
    <data_manager tool_file="data_manager/homer_genome_preparse.xml" id="homer_genome_preparse" version="4.11">
        <data_table name="homer_preparse">
            <output>
                <column name="value" />
                <column name="dbkey" />
                <column name="mask" />
                <column name="size" />
                <column name="name" />
                <column name="path" output_ref="out_file" >
                    <move type="directory" relativize_symlinks="True">
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/homer_preparse/${value}</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/homer_preparse/${value}</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
                <column name="path_fasta"/>
                <column name="version" />
            </output>
        </data_table>
    </data_manager>
    <data_manager tool_file="data_manager/homer_install_promoters.xml" id="homer_install_promoters" version="4.11">
        <data_table name="homer_promoters">
            <output>
                <column name="value"/>
                <column name="dbkey"/>
                <column name="organism"/>
                <column name="path" output_ref="out_file" >
                    <move type="directory" relativize_symlinks="True">
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">homer_promoters/${value}</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/homer_promoters/${value}</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
                <column name="organism_version"/>
                <column name="promoter_version"/>
            </output>
        </data_table>
    </data_manager>
</data_managers>