Mercurial > repos > iuc > data_manager_interproscan
diff data_manager/interproscan.xml @ 3:0df47f8552f6 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_interproscan commit 01e8e726d711c0685f46d3146e4fe0f2a1306036
author | iuc |
---|---|
date | Wed, 07 Dec 2022 13:41:38 +0000 |
parents | 7776cb18fdf8 |
children |
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--- a/data_manager/interproscan.xml Tue Feb 01 17:56:03 2022 +0000 +++ b/data_manager/interproscan.xml Wed Dec 07 13:41:38 2022 +0000 @@ -1,6 +1,6 @@ -<tool id="data_manager_interproscan" name="InterProScan data manager" version="0.0.2" tool_type="manage_data" profile="20.01"> +<tool id="data_manager_interproscan" name="InterProScan data manager" version="0.0.3" tool_type="manage_data" profile="20.01"> <requirements> - <requirement type="package" version="5.54-87.0">interproscan</requirement> + <requirement type="package" version="5.59-91.0">interproscan</requirement> <requirement type="package" version="2.26.0">requests</requirement> <!-- Forcing an old hmmer version for indexing due to https://github.com/ebi-pf-team/interproscan/issues/232 --> <requirement type="package" version="3.1b2">hmmer</requirement> @@ -15,7 +15,7 @@ <inputs> <param name="partial_data" type="hidden" value="" help="Used for testing"/> <param name="version" type="text" value="" label="Version to download" help="Leave empty to download the latest version"> - <validator type="regex" message="Version must be a valid InterProScan version (e.g. 5.52-86.0)">^([0-9]+\.[0-9]+-[0-9]+\.[0-9]+)?$</validator> + <validator type="regex" message="Version must be a valid InterProScan version (e.g. 5.59-91.0)">^([0-9]+\.[0-9]+-[0-9]+\.[0-9]+)?$</validator> </param> </inputs> <outputs> @@ -31,26 +31,31 @@ </assert_contents> </output> <assert_stdout> - <has_text text="Pressed and indexed" /> - <has_text text="Completed indexing the hmm models" /> + <has_text text="Finished." /> </assert_stdout> </test> <test> <param name="partial_data" value="--partial"/> - <param name="version" value="5.51-85.0"/> + <param name="version" value="5.58-91.0"/> <output name="output_file"> <assert_contents> - <has_text text="InterProScan 5.51-85.0"/> - <has_text text='"interproscan_version": "5.51-85.0'/> + <has_text text="InterProScan 5.58-91.0"/> + <has_text text='"interproscan_version": "5.58-91.0'/> </assert_contents> </output> <assert_stdout> - <has_text text="Pressed and indexed" /> - <has_text text="Completed indexing the hmm models" /> + <has_text text="Finished." /> </assert_stdout> </test> <test expect_failure="true"> <param name="partial_data" value="--partial"/> + <param name="version" value="5.51-85.0"/> + <assert_stderr> + <has_text text="Sorry, this data manager can only download data for InterProScan >= 5.58-91.0. Use the 0.0.2 version for older versions of InterProScan." /> + </assert_stderr> + </test> + <test expect_failure="true"> + <param name="partial_data" value="--partial"/> <param name="version" value="xxxx"/> <assert_stderr> <has_text text="Version must be a valid InterProScan version" />