Mercurial > repos > iuc > data_manager_mmseqs2_database
changeset 1:561c4b181bfa draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mmseqs2_database commit 25b603890e8048ac7bbffb81eaaa440f87049521
| author | iuc |
|---|---|
| date | Thu, 27 Mar 2025 16:42:41 +0000 |
| parents | 75cc3fb4c10f |
| children | 35885ec2e59b |
| files | tool-data/mmseqs2_databases.loc.sample |
| diffstat | 1 files changed, 10 insertions(+), 1 deletions(-) [+] |
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--- a/tool-data/mmseqs2_databases.loc.sample Thu Mar 27 14:37:32 2025 +0000 +++ b/tool-data/mmseqs2_databases.loc.sample Thu Mar 27 16:42:41 2025 +0000 @@ -1,4 +1,13 @@ #This is a sample file distributed with Galaxy that enables tools #to use a directory of metagenomics files. #file has this format (white space characters are TAB characters) -#UniRef100-16102024 UniRef100 (MMseqs2) UniRef100.15.6f452 /path/to/data 15.6f452 \ No newline at end of file +# Tab separated with 6 columns: +# value : unique value used to generate the database path +# name: name of the database generate using the date and version of the mmseqs2 databases +# type : type of the database (aminoacid, nucleotide...) +# taxonomy : whether or not the database should contain taxonomy information +# path : final path to mmseqs2 databases on galaxy +# version : tool version to filter database version depending of the tool +# value, name, type, taxonomy, path, version +# eg. +#SILVA-15.6f452-10022025 SILVA 10022025 nucleotide yes /path/to/data 15.6f452 \ No newline at end of file