Mercurial > repos > iuc > data_manager_mothur_toolsuite
annotate tool-data/mothur_taxonomy.loc.sample @ 1:aec831b54a5b draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
| author | iuc |
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| date | Thu, 28 Nov 2019 15:47:32 -0500 |
| parents | ab7a7e798c34 |
| children |
| rev | line source |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
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1 #This is a sample file distributed with Galaxy that enables tools |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
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2 #to use a directory of metagenomics files. |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
parents:
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3 #file has this format (white space characters are TAB characters): |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
parents:
diff
changeset
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4 # |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
parents:
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5 # Silva reference files: http://www.mothur.org/wiki/Silva_reference_files |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
parents:
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changeset
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6 # |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
parents:
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7 #<taxonomyname> <file_base> |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
parents:
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8 # |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
parents:
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9 #archaea.gg /project/db/galaxy/mothur/Silva.archaea/silva.archaea.gg.tax |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
parents:
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10 #archaea.silva /project/db/galaxy/mothur/Silva.archaea/silva.archaea.silva.tax |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
parents:
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11 #archaea.rdp /project/db/galaxy/mothur/Silva.archaea/silva.archaea.rdp.tax |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
parents:
diff
changeset
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12 #archaea.ncbi /project/db/galaxy/mothur/Silva.archaea/silva.archaea.ncbi.tax |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
parents:
diff
changeset
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13 #bacteria.gg /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.gg.tax |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
parents:
diff
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14 #bacteria.silva /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.silva.tax |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
parents:
diff
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15 #bacteria.ncbi /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.ncbi.tax |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
parents:
diff
changeset
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16 #bacteria.rdp /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.rdp.tax |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
parents:
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17 #bacteria.rdp6 /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.rdp6.tax |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
parents:
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18 #eukarya.silva /project/db/galaxy/mothur/silva.eukarya.silva.tax |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
parents:
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19 #eukarya.ncbi /project/db/galaxy/mothur/silva.eukarya.ncbi.tax |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
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20 #trainset6_032010.rdp.tax /project/db/galaxy/mothur/RDP/trainset6_032010.rdp.tax |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
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21 #trainset7_112011.pds.tax /project/db/galaxy/mothur/RDP/trainset7_112011.pds.tax |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
parents:
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22 #trainset7_112011.rdp.tax /project/db/galaxy/mothur/RDP/trainset7_112011.rdp.tax |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
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23 #FungiLSU_train_1400bp_8506_mod.tax /project/db/galaxy/mothur/RDP/FungiLSU_train_1400bp_8506_mod.tax |
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ab7a7e798c34
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mothur_toolsuite/ commit c1b936b54b7133106b3181df1e104986613a5bea
iuc
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24 # |