comparison data_manager_conf.xml @ 0:6be6e6198ac3 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/data_managers/data_manager_ncbi_fcs_gx_database_downloader commit 4a6561ed00e004260be3f3c29d81e814c60e20af

0:6be6e6198ac3

<data_managers>
    <data_manager tool_file="data_manager/data_manager_ncbi_fcs_gx_database_downloader.xml" id="data_manager_ncbi_fcs_gx_database_downloader">
        <data_table name="ncbi_fcs_gx_databases">
            <output>
                <column name="value" />
                <column name="source_manifest" />
                <column name="name" output_ref="output_file">
                    <move type="directory">
                        <source>${name}</source>
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">ncbi_fcs_gx_databases/${value}</target>
                    </move>
                    <value_translation><![CDATA[
#import os
#set manifest_filename = os.path.basename($source_manifest)
$GALAXY_DATA_MANAGER_DATA_PATH/ncbi_fcs_gx_databases/$value/$manifest_filename
                    ]]></value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
        <data_table name="ncbi_fcs_gx_divisions">
            <output>
                <column name="value" />
                <column name="tag" />
                <column name="name" />
            </output>
        </data_table>
    </data_manager>
</data_managers>