# HG changeset patch
# User iuc
# Date 1568927942 14400
# Node ID 6b0f2bdcc1b72aac3b0a125a876c0533538151ba
# Parent  7d4fd734b078eac94027a573eed65727201b8700
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_salmon_index_builder commit dcd9b028532258b62cfe15b60d5bef05cac9ed69"

diff -r 7d4fd734b078 -r 6b0f2bdcc1b7 data_manager/salmon_index_builder.xml
--- a/data_manager/salmon_index_builder.xml	Wed Jul 24 07:17:00 2019 -0400
+++ b/data_manager/salmon_index_builder.xml	Thu Sep 19 17:19:02 2019 -0400
@@ -1,11 +1,11 @@
 <tool id="salmon_index_builder_data_manager" name="Salmon" tool_type="manage_data" version="0.11.3" profile_version="19.01">
     <description>index builder</description>
     <requirements>
-        <requirement type="package" version="0.11.3">salmon</requirement>
+        <requirement type="package" version="0.14.1">salmon</requirement>
         <requirement type="package" version="3.7">python</requirement>
     </requirements>
    <macros>
-       <token name="@IDX_VERSION@">q5</token>
+       <token name="@IDX_VERSION@">q6</token>
    </macros>
     <command detect_errors="exit_code"><![CDATA[
         python '$__tool_directory__/salmon_index_builder.py' --output '${out_file}'
@@ -34,7 +34,11 @@
             <param name="all_fasta_source" value="phiX174"/>
             <param name="sequence_name" value="sequence_name"/>
             <param name="sequence_id" value="sequence_id"/>
-            <output name="out_file" file="salmon_phiX174.data_manager_json"/>
+            <output name="out_file">
+                <assert_contents>
+                    <has_line line='{"data_tables": {"salmon_indexes_versioned": [{"dbkey": "phiX174", "name": "sequence_name", "path": "sequence_id", "value": "sequence_id", "version": "q6"}]}}' />
+                </assert_contents>
+            </output>
         </test>
     </tests>
     <help>
diff -r 7d4fd734b078 -r 6b0f2bdcc1b7 test-data/salmon_phiX174.data_manager_json
--- a/test-data/salmon_phiX174.data_manager_json	Wed Jul 24 07:17:00 2019 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,1 +0,0 @@
-{"data_tables": {"salmon_indexes_versioned": [{"dbkey": "phiX174", "name": "sequence_name", "path": "sequence_id", "value": "sequence_id", "version": "q5"}]}}
\ No newline at end of file