# HG changeset patch
# User iuc
# Date 1761143902 0
# Node ID 9fc154508622ea5fb8a3c03bf98001e314506771
# Parent  5cde37527c8e387dde4552ad6e898ef8eef6da67
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/data_managers/data_manager_salmon_index_builder commit 3660c0d9ab58164c3966fbec969400ec19cb4000

diff -r 5cde37527c8e -r 9fc154508622 data_manager/salmon_index_builder.xml
--- a/data_manager/salmon_index_builder.xml	Wed Oct 22 09:01:14 2025 +0000
+++ b/data_manager/salmon_index_builder.xml	Wed Oct 22 14:38:22 2025 +0000
@@ -36,10 +36,10 @@
     <configfiles>
         <configfile name="dmjson"><![CDATA[{
 #if str($sequence_id).strip() == ""
-    #set sequence_id = $all_fasta_source.fields.dbkey
+    #set sequence_id = $transcriptome.fields.value
 #end if
 #if str($sequence_name).strip() == ""
-    #set sequence_name = $all_fasta_source.fields.dbkey
+    #set sequence_name = $transcriptome.fields.name
 #end if
 
   "data_tables":{