Mercurial > repos > iuc > data_manager_snpeff

diff data_manager/data_manager_snpEff_download.xml @ 9:08d7998c3afb draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_snpeff commit 036feef4f46b5aedabc5080c8fa4bc00d9c30d95"
author iuc
date Wed, 12 Feb 2020 18:33:53 -0500
parents a6400027d849
children
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--- a/data_manager/data_manager_snpEff_download.xml	Tue Oct 30 18:44:05 2018 -0400
+++ b/data_manager/data_manager_snpEff_download.xml	Wed Feb 12 18:33:53 2020 -0500
@@ -1,7 +1,7 @@
-<tool id="data_manager_snpeff_download" name="SnpEff Download" version="4.3r" tool_type="manage_data">
+<tool id="data_manager_snpeff_download" name="SnpEff Download" version="4.3.1t" tool_type="manage_data" profile="18.09">
     <description>Download a new database</description>
     <requirements>
-        <requirement type="package" version="4.3.1r">snpeff</requirement>
+        <requirement type="package" version="4.3.1t">snpeff</requirement>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
 python '$__tool_directory__/data_manager_snpEff_download.py'
@@ -19,11 +19,11 @@
     </outputs>
     <tests>
         <test>
-            <param name="genome_version" value="GRCh38.76"/>
+            <param name="genome_version" value="GRCh38.86"/>
             <output name="out_file">
                 <assert_contents>
                     <!-- Check that a genome was added -->
-                    <has_text text="GRCh38.76" />
+                    <has_text text="GRCh38.86" />
                     <has_text text="snpeffv_regulationdb" />
                 </assert_contents>
             </output>