diff data_manager/data_manager_snpEff_download.xml @ 7:a6400027d849 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_snpeff commit 9d2052269bfbca81a5f9cd10c3153e611358a329

--- a/data_manager/data_manager_snpEff_download.xml	Tue Apr 18 12:56:13 2017 -0400
+++ b/data_manager/data_manager_snpEff_download.xml	Tue Oct 24 07:27:38 2017 -0400
@@ -1,7 +1,7 @@
-<tool id="data_manager_snpeff_download" name="SnpEff Download" version="4.3k" tool_type="manage_data">
+<tool id="data_manager_snpeff_download" name="SnpEff Download" version="4.3r" tool_type="manage_data">
     <description>Download a new database</description>
     <requirements>
-        <requirement type="package" version="4.3k">snpeff</requirement>
+        <requirement type="package" version="4.3.1r">snpeff</requirement>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
 python '$__tool_directory__/data_manager_snpEff_download.py'
@@ -25,15 +25,14 @@
                     <!-- Check that a genome was added -->
                     <has_text text="GRCh38.76" />
                     <has_text text="snpeffv_regulationdb" />
-                    <has_text text="snpeffv_annotations" />
                 </assert_contents>
             </output>
         </test>
     </tests>
     <help><![CDATA[
-This tool downloads a SnpEff database and populates the data tables: snpeffv_genomedb, snpeffv_regulationdb, and snpeffv_annotations.
+This tool downloads a SnpEff database and populates the data tables: snpeffv_genomedb, snpeffv_regulationdb.
 
-To see the list of available SnpEff genomes run the "SnpEff Databases" data manager which records the available genome databases in data table: snpeff4_databases
+To see the list of available SnpEff genomes, run the "SnpEff Databases" data manager which records the available genome databases in data table: snpeffv_databases.
 
 The SnpEff genome databases are at: http://sourceforge.net/projects/snpeff/files/databases/