comparison data_manager_conf.xml @ 0:0e9e3bb5776a draft

planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_snpsift_dbnsfp commit 5316af00b4a71a7b526cbc9540d5158749cc38e4

0:0e9e3bb5776a

<?xml version="1.0"?>
<data_managers>
  <data_manager tool_file="data_manager/data_manager_snpsift_dbnsfp.xml" id="data_manager_snpsift_dbnsfp" >
    <data_table name="snpsift_dbnsfps">  <!-- Defines a Data Table to be modified. -->
      <output> <!-- Handle the output of the Data Manager Tool -->
        <column name="key" /> <!-- columns that are going to be specified by the Data Manager Tool -->
        <column name="build" /> <!-- columns that are going to be specified by the Data Manager Tool -->
        <column name="name" />  <!-- columns that are going to be specified by the Data Manager Tool -->
        <column name="value" output_ref="out_file" >
          <move type="directory" relativize_symlinks="True">
            <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">snpSift/v4_1/dbnsfp</target>
          </move>
          <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/snpSift/v4_1/dbnsfp/${value}</value_translation>
          <value_translation type="function">abspath</value_translation>
        </column>
        <column name="annnotations" />  <!-- columns that are going to be specified by the Data Manager Tool -->
      </output>
    </data_table>
  </data_manager>
</data_managers>